BLASTX nr result

ID: Gardenia21_contig00049386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00049386
         (356 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP10166.1| unnamed protein product [Coffea canephora]             59   1e-06
ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus c...    57   7e-06
ref|XP_007029035.1| Seven in absentia of 2 isoform 1 [Theobroma ...    56   9e-06

>emb|CDP10166.1| unnamed protein product [Coffea canephora]
          Length = 372

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/38 (71%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = -1

Query: 113 NPHFL-HSFYCIQVFNSYGKQFCLHFEAFQIGMAPVYM 3
           NPH + ++ + + VFN YGKQFCLHFEAFQIGMAPVYM
Sbjct: 254 NPHEVENATWMLTVFNCYGKQFCLHFEAFQIGMAPVYM 291


>ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus communis]
           gi|223525415|gb|EEF28013.1| Ubiquitin ligase SINAT2,
           putative [Ricinus communis]
          Length = 304

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 25/38 (65%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = -1

Query: 113 NPHFL-HSFYCIQVFNSYGKQFCLHFEAFQIGMAPVYM 3
           NPH + ++ + + VFN +G+QFCLHFEAFQIGMAPVYM
Sbjct: 186 NPHEVENATWMLTVFNCFGRQFCLHFEAFQIGMAPVYM 223


>ref|XP_007029035.1| Seven in absentia of 2 isoform 1 [Theobroma cacao]
           gi|590637146|ref|XP_007029036.1| Seven in absentia of 2
           isoform 1 [Theobroma cacao]
           gi|590637149|ref|XP_007029037.1| Seven in absentia of 2
           isoform 1 [Theobroma cacao] gi|508717640|gb|EOY09537.1|
           Seven in absentia of 2 isoform 1 [Theobroma cacao]
           gi|508717641|gb|EOY09538.1| Seven in absentia of 2
           isoform 1 [Theobroma cacao] gi|508717642|gb|EOY09539.1|
           Seven in absentia of 2 isoform 1 [Theobroma cacao]
          Length = 307

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
 Frame = -1

Query: 113 NPHFL-HSFYCIQVFNSYGKQFCLHFEAFQIGMAPVYM 3
           NPH + ++ + + VFN +GKQFCLHFEAFQ GMAPVYM
Sbjct: 189 NPHEVENATWMLTVFNCFGKQFCLHFEAFQFGMAPVYM 226


Top