BLASTX nr result

ID: Gardenia21_contig00049104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00049104
         (488 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP03908.1| unnamed protein product [Coffea canephora]            123   6e-26

>emb|CDP03908.1| unnamed protein product [Coffea canephora]
          Length = 468

 Score =  123 bits (308), Expect = 6e-26
 Identities = 81/156 (51%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
 Frame = -2

Query: 460 MSELCLSSTSRTQXXXXXXXXXXXXXXFIISHPLYFTYLIXXXXXXXXXXXXXXXXXXXX 281
           MSELCLS  SRT               FI+SHPLYFTYLI                    
Sbjct: 1   MSELCLSRPSRTHLSSLLVSNFLLFCSFIVSHPLYFTYLIFFSPYLLKLLSFLSPLFITT 60

Query: 280 XXXXXXXXTVSPCLI-NGNFPKESSDSHAQSKVSFLTSAYHAVVERLRPRI-XXXXXXXX 107
                   T SPCLI +G+F +ESSDSHA+SK SFLT+AYHAVVERLR +I         
Sbjct: 61  SLLLLALLTASPCLIVSGSFSRESSDSHAESKGSFLTAAYHAVVERLRSKIDDHIEEELL 120

Query: 106 XXXXXEVFKIVFGNPMIQDDKESQVEVFDAE-LVED 2
                E FKIVFGNP  QDDKESQVEVFDAE LVED
Sbjct: 121 CLEDFEAFKIVFGNPTTQDDKESQVEVFDAEVLVED 156


Top