BLASTX nr result

ID: Gardenia21_contig00046302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00046302
         (249 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173420.1| hypothetical protein NitaMp078 [Nicotiana tabac...    96   8e-18
emb|CDY45481.1| BnaCnng12400D [Brassica napus]                         89   1e-15
ref|XP_013442821.1| hypothetical protein MTR_0082s0050 [Medicago...    64   7e-10

>ref|YP_173420.1| hypothetical protein NitaMp078 [Nicotiana tabacum]
           gi|56806583|dbj|BAD83484.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 122

 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 46/48 (95%), Positives = 47/48 (97%)
 Frame = -2

Query: 236 RGKESKSMDINEPSLMDVAHDTINSTQGPALIEVAYFPSSEGKGQGFF 93
           RGKESKSMDINEPSLMDVAHDTINSTQGPALIEVAYFPSSEGKG+ FF
Sbjct: 26  RGKESKSMDINEPSLMDVAHDTINSTQGPALIEVAYFPSSEGKGRAFF 73


>emb|CDY45481.1| BnaCnng12400D [Brassica napus]
          Length = 292

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = -2

Query: 215 MDINEPSLMDVAHDTINSTQGPALIEVAYFPSSEGKGQGFFR 90
           MDINEPSLMDVAHDTINSTQGPALIEVAYFPSSEGKGQGFFR
Sbjct: 1   MDINEPSLMDVAHDTINSTQGPALIEVAYFPSSEGKGQGFFR 42


>ref|XP_013442821.1| hypothetical protein MTR_0082s0050 [Medicago truncatula]
           gi|657370785|gb|KEH16846.1| hypothetical protein
           MTR_0082s0050 [Medicago truncatula]
          Length = 334

 Score = 63.9 bits (154), Expect(2) = 7e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -2

Query: 236 RGKESKSMDINEPSLMDVAHDTINSTQGPA 147
           RGKESKSMDINEPSLMDVAHDTINSTQGPA
Sbjct: 91  RGKESKSMDINEPSLMDVAHDTINSTQGPA 120



 Score = 26.2 bits (56), Expect(2) = 7e-10
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = -3

Query: 100 AFFVLRVGGSHEIFS 56
           AFFV+ VGGSH+I++
Sbjct: 121 AFFVVIVGGSHDIYA 135


Top