BLASTX nr result
ID: Gardenia21_contig00045566
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00045566
(251 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]... 126 6e-27
ref|YP_008999571.1| cytochrome c biogenesis FN (mitochondrion) (... 126 7e-27
ref|XP_002535312.1| 60S ribosomal protein L16, putative [Ricinus... 125 2e-26
dbj|BAO50922.1| ribosomal protein S3 (mitochondrion) [Hevea bras... 124 2e-26
gb|ABA99235.1| Mitochondrial ribosomal protein S3, putative, exp... 121 2e-25
gb|ABA99284.1| Mitochondrial ribosomal protein S3, putative [Ory... 121 2e-25
gb|EPS74728.1| hypothetical protein M569_00003, partial [Genlise... 121 2e-25
gb|EMS65086.1| Ribosomal protein S3, mitochondrial [Triticum ura... 119 1e-24
gb|ALF04066.1| ribosomal protein S3 (mitochondrion) [Cannabis sa... 109 9e-22
ref|YP_008802511.1| ribosomal protein S3 (mitochondrion) (mitoch... 109 9e-22
gb|ALE29203.1| ribosomal protein S3 (mitochondrion) [Heuchera pa... 108 1e-21
gb|AJM70238.1| ribosomal protein S3 (mitochondrion) [Nicotiana t... 108 1e-21
dbj|BAD83474.2| ribosomal protein S3 (mitochondrion) [Nicotiana ... 108 2e-21
ref|YP_003587231.1| ribosomal protein S3 [Citrullus lanatus] gi|... 108 2e-21
sp|Q95749.3|RT03_ARATH RecName: Full=Ribosomal protein S3, mitoc... 107 3e-21
gb|ABS50654.1| ribosomal protein S3 [Arabidopsis thaliana] gi|15... 107 3e-21
ref|NP_085481.1| ribosomal protein S3 [Arabidopsis thaliana] gi|... 107 3e-21
dbj|BAA12250.1| ribosomal protein S3 [Arabidopsis thaliana] 107 3e-21
ref|YP_717168.1| ribosomal protein S3 [Brassica napus] gi|375911... 107 5e-21
sp|P49386.1|RT03_BRANA RecName: Full=Ribosomal protein S3, mitoc... 107 5e-21
>gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]
gi|442803272|gb|AGC79007.1| hypothetical protein
(mitochondrion) [Vicia faba]
Length = 602
Score = 126 bits (317), Expect = 6e-27
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = -2
Query: 250 GSSHGGVTIDSIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 71
G SHGGVTIDSIYYYGKLVYQDVNLRSYFGSIRPP RLTFGFRLGRCI++HFPKRTFIHF
Sbjct: 53 GYSHGGVTIDSIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHF 112
Query: 70 F 68
F
Sbjct: 113 F 113
>ref|YP_008999571.1| cytochrome c biogenesis FN (mitochondrion) (mitochondrion)
[Helianthus annuus] gi|571031402|gb|AHF21047.1|
cytochrome c biogenesis FN (mitochondrion) [Helianthus
annuus]
Length = 558
Score = 126 bits (316), Expect = 7e-27
Identities = 58/61 (95%), Positives = 58/61 (95%)
Frame = -2
Query: 250 GSSHGGVTIDSIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 71
GSSHGG IDSIYYYGK VYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF
Sbjct: 12 GSSHGGARIDSIYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 71
Query: 70 F 68
F
Sbjct: 72 F 72
>ref|XP_002535312.1| 60S ribosomal protein L16, putative [Ricinus communis]
gi|223523477|gb|EEF27073.1| 60S ribosomal protein L16,
putative [Ricinus communis]
Length = 668
Score = 125 bits (313), Expect = 2e-26
Identities = 58/61 (95%), Positives = 59/61 (96%)
Frame = -2
Query: 250 GSSHGGVTIDSIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 71
GS HGGVTIDSIYYYGK VYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFI+F
Sbjct: 12 GSFHGGVTIDSIYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFINF 71
Query: 70 F 68
F
Sbjct: 72 F 72
>dbj|BAO50922.1| ribosomal protein S3 (mitochondrion) [Hevea brasiliensis]
Length = 586
Score = 124 bits (312), Expect = 2e-26
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = -2
Query: 250 GSSHGGVTIDSIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 71
GS HGG+TIDSIYYYGK VYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFI+F
Sbjct: 37 GSFHGGITIDSIYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFINF 96
Query: 70 F 68
F
Sbjct: 97 F 97
>gb|ABA99235.1| Mitochondrial ribosomal protein S3, putative, expressed [Oryza
sativa Japonica Group]
Length = 748
Score = 121 bits (303), Expect = 2e-25
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = -2
Query: 250 GSSHGGVTIDSIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 71
GSSHG VTIDSIYYYGK +YQDVNLRSYF SIRPPT LTFGFRLGRCIILHFPKRTFIHF
Sbjct: 29 GSSHGSVTIDSIYYYGKSLYQDVNLRSYFSSIRPPTILTFGFRLGRCIILHFPKRTFIHF 88
Query: 70 F 68
F
Sbjct: 89 F 89
>gb|ABA99284.1| Mitochondrial ribosomal protein S3, putative [Oryza sativa Japonica
Group]
Length = 752
Score = 121 bits (303), Expect = 2e-25
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = -2
Query: 250 GSSHGGVTIDSIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 71
GSSHG VTIDSIYYYGK +YQDVNLRSYF SIRPPT LTFGFRLGRCIILHFPKRTFIHF
Sbjct: 29 GSSHGSVTIDSIYYYGKSLYQDVNLRSYFSSIRPPTILTFGFRLGRCIILHFPKRTFIHF 88
Query: 70 F 68
F
Sbjct: 89 F 89
>gb|EPS74728.1| hypothetical protein M569_00003, partial [Genlisea aurea]
Length = 679
Score = 121 bits (303), Expect = 2e-25
Identities = 56/61 (91%), Positives = 57/61 (93%)
Frame = -2
Query: 250 GSSHGGVTIDSIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 71
GSSH GVTIDSIYYYGK VYQD+NLRSYFGSIRPPTRLTFGFRLGRCIILHFPK FIHF
Sbjct: 9 GSSHDGVTIDSIYYYGKSVYQDLNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKIAFIHF 68
Query: 70 F 68
F
Sbjct: 69 F 69
>gb|EMS65086.1| Ribosomal protein S3, mitochondrial [Triticum urartu]
Length = 779
Score = 119 bits (297), Expect = 1e-24
Identities = 54/61 (88%), Positives = 56/61 (91%)
Frame = -2
Query: 250 GSSHGGVTIDSIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 71
GSSHG VTIDSIYYYGK +YQDVNLRSYF SIRPPT+L GFRLGRCIILHFPKRTFIHF
Sbjct: 29 GSSHGSVTIDSIYYYGKSLYQDVNLRSYFSSIRPPTKLALGFRLGRCIILHFPKRTFIHF 88
Query: 70 F 68
F
Sbjct: 89 F 89
>gb|ALF04066.1| ribosomal protein S3 (mitochondrion) [Cannabis sativa]
Length = 548
Score = 109 bits (272), Expect = 9e-22
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = -2
Query: 220 SIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 68
S YYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF
Sbjct: 24 SDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 74
>ref|YP_008802511.1| ribosomal protein S3 (mitochondrion) (mitochondrion) [Asclepias
syriaca] gi|556562349|gb|AGZ63045.1| ribosomal protein
S3 (mitochondrion) (mitochondrion) [Asclepias syriaca]
Length = 555
Score = 109 bits (272), Expect = 9e-22
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = -2
Query: 220 SIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 68
S YYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF
Sbjct: 24 SDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 74
>gb|ALE29203.1| ribosomal protein S3 (mitochondrion) [Heuchera parviflora var.
saurensis]
Length = 565
Score = 108 bits (271), Expect = 1e-21
Identities = 56/74 (75%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Frame = -2
Query: 220 SIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFXXXXXXXXX 41
S YYYGK VYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF
Sbjct: 24 SDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLK 83
Query: 40 XXXXXXPG-KKGKG 2
PG KKGKG
Sbjct: 84 RHQKSRPGKKKGKG 97
>gb|AJM70238.1| ribosomal protein S3 (mitochondrion) [Nicotiana tabacum/Hyoscyamus
niger cybrid]
Length = 563
Score = 108 bits (271), Expect = 1e-21
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -2
Query: 220 SIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 68
SIYYYGK VYQDVNLRSYFGSIRPPTRLTFGFRLGRCII+HFPKRTFIHFF
Sbjct: 24 SIYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIIIHFPKRTFIHFF 74
>dbj|BAD83474.2| ribosomal protein S3 (mitochondrion) [Nicotiana tabacum]
Length = 563
Score = 108 bits (270), Expect = 2e-21
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -2
Query: 220 SIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 68
S YYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCII+HFPKRTFIHFF
Sbjct: 24 SDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIIIHFPKRTFIHFF 74
>ref|YP_003587231.1| ribosomal protein S3 [Citrullus lanatus]
gi|259156790|gb|ACV96652.1| ribosomal protein S3
[Citrullus lanatus]
Length = 563
Score = 108 bits (269), Expect = 2e-21
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -2
Query: 220 SIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 68
S YYYGKL+YQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF
Sbjct: 24 SDYYYGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 74
>sp|Q95749.3|RT03_ARATH RecName: Full=Ribosomal protein S3, mitochondrial
Length = 556
Score = 107 bits (268), Expect = 3e-21
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = -2
Query: 220 SIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 68
S YYYGK VYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF
Sbjct: 24 SEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 74
>gb|ABS50654.1| ribosomal protein S3 [Arabidopsis thaliana]
gi|153799848|gb|ABS50655.1| ribosomal protein S3,
partial (mitochondrion) [Arabidopsis thaliana]
Length = 518
Score = 107 bits (268), Expect = 3e-21
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = -2
Query: 220 SIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 68
S YYYGK VYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF
Sbjct: 3 SDYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 53
>ref|NP_085481.1| ribosomal protein S3 [Arabidopsis thaliana]
gi|6851009|emb|CAA69755.3| ribosomal protein S3
[Arabidopsis thaliana] gi|339773221|gb|AEK01245.1| rps3
[Arabidopsis thaliana] gi|339773252|gb|AEK01275.1| rps3
[Arabidopsis thaliana] gi|339773286|gb|AEK01308.1| rps3
[Arabidopsis thaliana]
Length = 556
Score = 107 bits (268), Expect = 3e-21
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = -2
Query: 220 SIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 68
S YYYGK VYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF
Sbjct: 24 SEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 74
>dbj|BAA12250.1| ribosomal protein S3 [Arabidopsis thaliana]
Length = 531
Score = 107 bits (267), Expect = 3e-21
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = -2
Query: 214 YYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 68
YYYGK VYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF
Sbjct: 1 YYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 49
>ref|YP_717168.1| ribosomal protein S3 [Brassica napus] gi|37591116|dbj|BAC98918.1|
ribosomal protein S3 [Brassica napus]
Length = 553
Score = 107 bits (266), Expect = 5e-21
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = -2
Query: 220 SIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 68
S YYYGK VYQDVNLRSYFGSIRPPTRLTFGFRLGRCI+LHFPKRTFIHFF
Sbjct: 24 SEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCILLHFPKRTFIHFF 74
>sp|P49386.1|RT03_BRANA RecName: Full=Ribosomal protein S3, mitochondrial
Length = 555
Score = 107 bits (266), Expect = 5e-21
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = -2
Query: 220 SIYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFF 68
S YYYGK VYQDVNLRSYFGSIRPPTRLTFGFRLGRCI+LHFPKRTFIHFF
Sbjct: 24 SEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCILLHFPKRTFIHFF 74