BLASTX nr result
ID: Gardenia21_contig00044696
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00044696
(385 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP22087.1| unnamed protein product, partial [Coffea canephora] 104 2e-20
emb|CDP21499.1| unnamed protein product [Coffea canephora] 85 2e-14
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 63 8e-08
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 63 1e-07
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 63 1e-07
ref|XP_012436815.1| PREDICTED: uncharacterized protein LOC105763... 62 2e-07
ref|XP_012459386.1| PREDICTED: uncharacterized protein LOC105779... 60 5e-07
gb|KRG94320.1| hypothetical protein GLYMA_19G076000 [Glycine max] 56 9e-06
>emb|CDP22087.1| unnamed protein product, partial [Coffea canephora]
Length = 706
Score = 104 bits (260), Expect = 2e-20
Identities = 66/131 (50%), Positives = 82/131 (62%), Gaps = 6/131 (4%)
Frame = +1
Query: 7 GHHLISEIQKEFHISISDVESEFSEI---TDSTLFTLQVP---VKDCPINYLIKSLKPVE 168
G LISEIQ E H +ISD+ESEFSE TD+TL LQVP + PI + K +
Sbjct: 408 GVKLISEIQNELHFTISDLESEFSEQEEPTDTTLLALQVPEEILSISPIASINKDKTEKD 467
Query: 169 TCPKTPIHILPKKFSKPIPVIAFFDSRAAVFILNKTILPYSF*GPEIH*FRSAA*EIFQT 348
P+T IHIL K+SKPIP+IAFFD+ A + I+ K ILP SF PE + FR+A IF+T
Sbjct: 468 VYPQTLIHILLDKYSKPIPLIAFFDTGAYISIMRKDILPDSFWIPETNKFRAADGNIFET 527
Query: 349 HRTTKKPIIVK 381
TK I +K
Sbjct: 528 KFITKNSITLK 538
>emb|CDP21499.1| unnamed protein product [Coffea canephora]
Length = 1344
Score = 85.1 bits (209), Expect = 2e-14
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Frame = +1
Query: 7 GHHLISEIQKEFHISISDVESEFSEI---TDSTLFTLQVP---VKDCPINYLIKSLKPVE 168
G LISEIQ E H +ISD+ESEFSE TD+TL LQVP + PI + K +
Sbjct: 1151 GVKLISEIQNELHFTISDLESEFSEQEEPTDTTLLALQVPEEILSISPIASINKEKIGKD 1210
Query: 169 TCPKTPIHILPKKFSKPIPVIAFFDSRAAVFILNKTILPYSF*GPE 306
P+T IHIL K+SK IP+IAFFD+ A + I+ K ILP S+ PE
Sbjct: 1211 VYPQTLIHILLDKYSKHIPLIAFFDTGAYISIMRKDILPDSYWIPE 1256
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT [Petunia vein clearing virus isolate Shepherd]
gi|14574598|gb|AAK68664.1| ORF I polyprotein [petunia
vein clearing virus]
Length = 2179
Score = 63.2 bits (152), Expect = 8e-08
Identities = 51/140 (36%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Frame = +1
Query: 16 LISEIQKEFHISISD-VESEFS---EITDSTLFTLQVPVKDCPINYLIKSLKPVET---- 171
LISEIQK I I D +ES FS E ++ TLF+L+ + Y I S + +T
Sbjct: 1134 LISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEFYEEYAGEQYQITSYEAPKTENPP 1193
Query: 172 ---------CPKTPIHILPKKFSKPIPVIAFFDSRAAVFILNKTILPYSF*GPEIH*FRS 324
P+T + I K+ KPI VIAF+D+ AA I++ ILP + P F +
Sbjct: 1194 LPKIHTIVEIPQTEVKIYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPHFRHFGT 1253
Query: 325 AA*EIFQTHRTTKKPIIVKF 384
A I T TK PI ++F
Sbjct: 1254 ADDGILTTTVKTKHPITIEF 1273
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 62.8 bits (151), Expect = 1e-07
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Frame = +1
Query: 16 LISEIQKEFHISISD-VESEFS---EITDSTLFTLQVPVKDCPINYLIKSLKPVET---- 171
LISEIQK I I D +ES FS E ++ TLF+L+ + Y I S + +T
Sbjct: 1135 LISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEFYEEYAGEQYQITSYEAPKTENPP 1194
Query: 172 ---------CPKTPIHILPKKFSKPIPVIAFFDSRAAVFILNKTILPYSF*GPEIH*FRS 324
P+T + + K+ KPI VIAF+D+ AA I++ ILP + P F +
Sbjct: 1195 LPKIHTIVEIPQTEVKVYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPHFRHFGT 1254
Query: 325 AA*EIFQTHRTTKKPIIVKF 384
A I T TK PI ++F
Sbjct: 1255 ADDGILTTTVKTKHPITIEF 1274
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT [Petunia vein clearing virus
isolate Hohn] gi|34328896|gb|AAO67368.1| polyprotein 1
[Petunia vein clearing virus]
Length = 2180
Score = 62.8 bits (151), Expect = 1e-07
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Frame = +1
Query: 16 LISEIQKEFHISISD-VESEFS---EITDSTLFTLQVPVKDCPINYLIKSLKPVET---- 171
LISEIQK I I D +ES FS E ++ TLF+L+ + Y I S + +T
Sbjct: 1135 LISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEFYEEYAGEQYQITSYEAPKTENPP 1194
Query: 172 ---------CPKTPIHILPKKFSKPIPVIAFFDSRAAVFILNKTILPYSF*GPEIH*FRS 324
P+T + + K+ KPI VIAF+D+ AA I++ ILP + P F +
Sbjct: 1195 LPKIHTIVEIPQTEVKVYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPHFRHFGT 1254
Query: 325 AA*EIFQTHRTTKKPIIVKF 384
A I T TK PI ++F
Sbjct: 1255 ADDGILTTTVKTKHPITIEF 1274
>ref|XP_012436815.1| PREDICTED: uncharacterized protein LOC105763228 [Gossypium
raimondii]
Length = 985
Score = 61.6 bits (148), Expect = 2e-07
Identities = 40/113 (35%), Positives = 61/113 (53%)
Frame = +1
Query: 46 ISISDVESEFSEITDSTLFTLQVPVKDCPINYLIKSLKPVETCPKTPIHILPKKFSKPIP 225
+S +SEFS +++S+L +Q+ C ++ L + T P P+ I K+SKP+
Sbjct: 89 VSSDSEDSEFS-LSESSLM-IQLQENCCSLSILSQEASMEATAPHIPVSIYTSKYSKPVT 146
Query: 226 VIAFFDSRAAVFILNKTILPYSF*GPEIH*FRSAA*EIFQTHRTTKKPIIVKF 384
VIAF D+ AA I+N ILP P F SA+ ++F T KPI ++F
Sbjct: 147 VIAFIDTGAAESIMNPEILPREHWEPHTRYFSSASGKVFSTD-LRSKPIKIQF 198
>ref|XP_012459386.1| PREDICTED: uncharacterized protein LOC105779922 [Gossypium
raimondii]
Length = 382
Score = 60.5 bits (145), Expect = 5e-07
Identities = 40/113 (35%), Positives = 60/113 (53%)
Frame = +1
Query: 46 ISISDVESEFSEITDSTLFTLQVPVKDCPINYLIKSLKPVETCPKTPIHILPKKFSKPIP 225
+S +SEFS +++S+L +Q C ++ L + T P P+ I K+SKP+
Sbjct: 128 VSSDSEDSEFS-LSESSLM-IQPQKNYCSLSILSQEASMEATAPHIPVSICTSKYSKPVT 185
Query: 226 VIAFFDSRAAVFILNKTILPYSF*GPEIH*FRSAA*EIFQTHRTTKKPIIVKF 384
VIAF D+ AA I+N ILP P F SA+ ++F T KPI ++F
Sbjct: 186 VIAFIDTGAAESIMNPEILPREHWEPHTRYFSSASGKVFSTD-LRSKPIKIQF 237
>gb|KRG94320.1| hypothetical protein GLYMA_19G076000 [Glycine max]
Length = 742
Score = 56.2 bits (134), Expect = 9e-06
Identities = 37/118 (31%), Positives = 58/118 (49%)
Frame = +1
Query: 31 QKEFHISISDVESEFSEITDSTLFTLQVPVKDCPINYLIKSLKPVETCPKTPIHILPKKF 210
+ EF ++ +D E S +F++Q +S+KP P I +L KKF
Sbjct: 633 ETEFALNQTDSSDEESSAPPIPIFSIQEE----------QSIKPAIPQPCVEIQVLAKKF 682
Query: 211 SKPIPVIAFFDSRAAVFILNKTILPYSF*GPEIH*FRSAA*EIFQTHRTTKKPIIVKF 384
KPI VIAF D+ A +++ ILP + E+ F + ++F+T T PI +KF
Sbjct: 683 EKPIKVIAFIDTGAQRTMMDPDILPQEYWKNEVAYFVAVDGKVFRTDLVTHAPISIKF 740