BLASTX nr result

ID: Gardenia21_contig00043920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00043920
         (680 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009111319.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...    58   5e-06
emb|CDP17078.1| unnamed protein product [Coffea canephora]             58   5e-06
ref|XP_009802973.1| PREDICTED: uncharacterized protein LOC104248...    57   8e-06
ref|XP_009378707.1| PREDICTED: uncharacterized protein LOC103967...    57   8e-06

>ref|XP_009111319.1| PREDICTED: E3 ubiquitin-protein ligase MARCH8 [Brassica rapa]
          Length = 213

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
 Frame = -2

Query: 679 AHRDCIQRWCNEKGNTICELCLQVRIPFFIYLFFLSFKAVVVVSRKQ*YHFSTRSAYRRL 500
           AHRDCIQRWCNEKGNT CE+CLQV    + + +    K   ++  ++          RRL
Sbjct: 46  AHRDCIQRWCNEKGNTTCEICLQV----YRHGYTAIPKPTKMIEEEEVTIREGGGGRRRL 101

Query: 499 VLFSVPPVVQS------FRRLCFPSSSLL 431
           V  + P   QS      FR L F  + LL
Sbjct: 102 VSITEPDFTQSNSVATFFRSLTFTLAVLL 130


>emb|CDP17078.1| unnamed protein product [Coffea canephora]
          Length = 236

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -2

Query: 679 AHRDCIQRWCNEKGNTICELCLQ 611
           AHRDCIQRWCNEKGNTICELCLQ
Sbjct: 66  AHRDCIQRWCNEKGNTICELCLQ 88


>ref|XP_009802973.1| PREDICTED: uncharacterized protein LOC104248426 [Nicotiana
           sylvestris]
          Length = 226

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = -2

Query: 679 AHRDCIQRWCNEKGNTICELCLQ 611
           AHRDCIQRWCNEKGNTICE+CLQ
Sbjct: 54  AHRDCIQRWCNEKGNTICEICLQ 76


>ref|XP_009378707.1| PREDICTED: uncharacterized protein LOC103967168 [Pyrus x
           bretschneideri]
          Length = 238

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = -2

Query: 679 AHRDCIQRWCNEKGNTICELCLQ 611
           AHRDCIQRWCNEKGNTICE+CLQ
Sbjct: 49  AHRDCIQRWCNEKGNTICEICLQ 71


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