BLASTX nr result
ID: Gardenia21_contig00043871
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00043871
(423 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP10074.1| unnamed protein product [Coffea canephora] 193 4e-47
ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I sub... 147 3e-33
ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I sub... 146 7e-33
ref|XP_008443105.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 144 3e-32
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr... 143 6e-32
ref|XP_011652120.1| PREDICTED: DNA-directed RNA polymerase I sub... 142 1e-31
gb|KFK35011.1| hypothetical protein AALP_AA5G222600 [Arabis alpina] 140 3e-31
ref|XP_013663557.1| PREDICTED: DNA-directed RNA polymerase I sub... 140 5e-31
ref|XP_009116470.1| PREDICTED: DNA-directed RNA polymerase I sub... 140 5e-31
emb|CDY06084.1| BnaA09g36960D [Brassica napus] 140 5e-31
ref|XP_013672001.1| PREDICTED: DNA-directed RNA polymerase I sub... 139 6e-31
ref|XP_013604500.1| PREDICTED: DNA-directed RNA polymerase I sub... 139 6e-31
emb|CDX72007.1| BnaC08g28670D [Brassica napus] 139 6e-31
ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub... 138 1e-30
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 138 2e-30
ref|XP_013652021.1| PREDICTED: DNA-directed RNA polymerase I sub... 137 2e-30
ref|XP_012574995.1| PREDICTED: DNA-directed RNA polymerase I sub... 137 2e-30
ref|XP_009104070.1| PREDICTED: DNA-directed RNA polymerase I sub... 137 2e-30
ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I sub... 137 3e-30
ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I sub... 137 3e-30
>emb|CDP10074.1| unnamed protein product [Coffea canephora]
Length = 1680
Score = 193 bits (491), Expect = 4e-47
Identities = 90/97 (92%), Positives = 93/97 (95%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPFD 292
MAQTTEGGAS AVEKVLFSFMT+EEVRKHS VKI NPVLLD+VGRP PGGLYDPAMGPFD
Sbjct: 1 MAQTTEGGASEAVEKVLFSFMTSEEVRKHSVVKIKNPVLLDTVGRPMPGGLYDPAMGPFD 60
Query: 293 EQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
EQSPCKSCGQRSFHCTGHCGHIEL+SPAYNPLLFNML
Sbjct: 61 EQSPCKSCGQRSFHCTGHCGHIELVSPAYNPLLFNML 97
>ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Sesamum
indicum]
Length = 1701
Score = 147 bits (371), Expect = 3e-33
Identities = 66/85 (77%), Positives = 72/85 (84%)
Frame = +2
Query: 149 VEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPFDEQSPCKSCGQRS 328
VE V F FMT EEVR+HS VKITNP LLD + +P PGGLYDPAMGP DE SPCKSCGQR+
Sbjct: 7 VEAVRFGFMTDEEVRRHSVVKITNPNLLDILEKPIPGGLYDPAMGPLDENSPCKSCGQRA 66
Query: 329 FHCTGHCGHIELISPAYNPLLFNML 403
+HC GHCGHIEL+SPAYNPLLFN L
Sbjct: 67 YHCPGHCGHIELVSPAYNPLLFNTL 91
>ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
sylvestris]
Length = 1681
Score = 146 bits (368), Expect = 7e-33
Identities = 67/90 (74%), Positives = 75/90 (83%)
Frame = +2
Query: 134 GASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPFDEQSPCKS 313
GAS AVE V FSFMT EEVRKHS VK+T+P LLD++G P PGGLYDPAMGP E+S CKS
Sbjct: 4 GASEAVEAVHFSFMTDEEVRKHSVVKVTSPNLLDTLGGPLPGGLYDPAMGPLSERSQCKS 63
Query: 314 CGQRSFHCTGHCGHIELISPAYNPLLFNML 403
CGQ + HC GHCGHIEL+SP +NPLLFNML
Sbjct: 64 CGQGTVHCPGHCGHIELVSPVFNPLLFNML 93
>ref|XP_008443105.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
subunit rpa1 [Cucumis melo]
Length = 1681
Score = 144 bits (362), Expect = 3e-32
Identities = 68/94 (72%), Positives = 77/94 (81%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPFD 292
MAQTTEG AS +V+ V FSFMT EVRKHSAVK+T P+LLD +GRP GGLYDPAMG D
Sbjct: 1 MAQTTEG-ASESVKVVTFSFMTNAEVRKHSAVKVTAPILLDGMGRPVSGGLYDPAMGSLD 59
Query: 293 EQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLF 394
E + CKSCGQR F+C GHCGHI+L+SP YNPLLF
Sbjct: 60 ETTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLF 93
>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
gi|557103957|gb|ESQ44311.1| hypothetical protein
EUTSA_v10005738mg [Eutrema salsugineum]
Length = 1697
Score = 143 bits (360), Expect = 6e-32
Identities = 67/99 (67%), Positives = 78/99 (78%)
Frame = +2
Query: 107 LRMAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGP 286
+ AQT EG AS VE V FSFMT E+VRKHS +K+TNPVLLD+V RP PGGLYDP MGP
Sbjct: 1 MAQAQTIEG-ASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVERPVPGGLYDPLMGP 59
Query: 287 FDEQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
D+++ CKSCGQ S C GHCGHIEL+ P Y+PLLFN+L
Sbjct: 60 LDDRTSCKSCGQLSLVCPGHCGHIELVYPIYHPLLFNLL 98
>ref|XP_011652120.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1 [Cucumis
sativus] gi|778684907|ref|XP_011652121.1| PREDICTED:
DNA-directed RNA polymerase I subunit RPA1 [Cucumis
sativus] gi|700204204|gb|KGN59337.1| hypothetical
protein Csa_3G811600 [Cucumis sativus]
Length = 1681
Score = 142 bits (358), Expect = 1e-31
Identities = 68/97 (70%), Positives = 78/97 (80%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPFD 292
MAQTTEG AS +V+ V FSFMT EEVRK S VK+T P+LLD +GRP GGLYDPAMG D
Sbjct: 1 MAQTTEG-ASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLD 59
Query: 293 EQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
E + CKSCGQR F+C GHCGHI+L+SP YNPLLF +L
Sbjct: 60 ETTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVIL 96
>gb|KFK35011.1| hypothetical protein AALP_AA5G222600 [Arabis alpina]
Length = 1658
Score = 140 bits (354), Expect = 3e-31
Identities = 64/95 (67%), Positives = 78/95 (82%)
Frame = +2
Query: 119 QTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPFDEQ 298
QTTEG A+ VE V FSFMT E+V+KHS +K+TNPVLLD+V RP PGGLYDP +GP D++
Sbjct: 4 QTTEG-ATQMVESVRFSFMTEEDVQKHSFLKVTNPVLLDNVDRPVPGGLYDPLLGPLDDR 62
Query: 299 SPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
+PCKSCGQ + C GHCGHIEL+ P Y+PLLFN+L
Sbjct: 63 TPCKSCGQLTLGCPGHCGHIELLYPIYHPLLFNLL 97
>ref|XP_013663557.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like isoform
X1 [Brassica napus] gi|923714914|ref|XP_013663558.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa1-like isoform X2 [Brassica napus]
gi|923714919|ref|XP_013663559.1| PREDICTED: DNA-directed
RNA polymerase I subunit rpa1-like isoform X3 [Brassica
napus]
Length = 1643
Score = 140 bits (352), Expect = 5e-31
Identities = 64/98 (65%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPF- 289
MAQTT GAS VE V FSFMT E+VRKHS +++T P+LLD+VGRP PGGLYDP MGP
Sbjct: 1 MAQTTTEGASQVVESVRFSFMTEEDVRKHSVLRVTKPILLDNVGRPVPGGLYDPLMGPME 60
Query: 290 DEQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
D++S CK+C QR+ C GHCG IEL+ P Y+PLLFN+L
Sbjct: 61 DDRSKCKTCDQRNLDCPGHCGRIELVRPIYHPLLFNLL 98
>ref|XP_009116470.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Brassica
rapa]
Length = 1640
Score = 140 bits (352), Expect = 5e-31
Identities = 64/98 (65%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPF- 289
MAQTT GAS VE V FSFMT E+VRKHS +++T P+LLD+VGRP PGGLYDP MGP
Sbjct: 1 MAQTTTEGASQVVESVRFSFMTEEDVRKHSVLRVTKPILLDNVGRPVPGGLYDPLMGPME 60
Query: 290 DEQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
D++S CK+C QR+ C GHCG IEL+ P Y+PLLFN+L
Sbjct: 61 DDRSKCKTCDQRNLDCPGHCGRIELVRPIYHPLLFNLL 98
>emb|CDY06084.1| BnaA09g36960D [Brassica napus]
Length = 1521
Score = 140 bits (352), Expect = 5e-31
Identities = 64/98 (65%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPF- 289
MAQTT GAS VE V FSFMT E+VRKHS +++T P+LLD+VGRP PGGLYDP MGP
Sbjct: 1 MAQTTTEGASQVVESVRFSFMTEEDVRKHSVLRVTKPILLDNVGRPVPGGLYDPLMGPME 60
Query: 290 DEQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
D++S CK+C QR+ C GHCG IEL+ P Y+PLLFN+L
Sbjct: 61 DDRSKCKTCDQRNLDCPGHCGRIELVRPIYHPLLFNLL 98
>ref|XP_013672001.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like
[Brassica napus]
Length = 1643
Score = 139 bits (351), Expect = 6e-31
Identities = 64/98 (65%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPF- 289
MAQTT GAS VE V FSFMT E+VRKHS +++T P+LLD+VGRP PGGLYDP MGP
Sbjct: 1 MAQTTTEGASQVVESVRFSFMTEEDVRKHSVLQVTKPILLDNVGRPVPGGLYDPLMGPME 60
Query: 290 DEQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
D++S CK+C QR+ C GHCG IEL+ P Y+PLLFN+L
Sbjct: 61 DDRSKCKTCDQRNLDCPGHCGRIELVRPIYHPLLFNLL 98
>ref|XP_013604500.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Brassica
oleracea var. oleracea]
Length = 1643
Score = 139 bits (351), Expect = 6e-31
Identities = 64/98 (65%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPF- 289
MAQTT GAS VE V FSFMT E+VRKHS +++T P+LLD+VGRP PGGLYDP MGP
Sbjct: 1 MAQTTTEGASQVVESVRFSFMTEEDVRKHSVLQVTKPILLDNVGRPVPGGLYDPLMGPME 60
Query: 290 DEQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
D++S CK+C QR+ C GHCG IEL+ P Y+PLLFN+L
Sbjct: 61 DDRSKCKTCDQRNLDCPGHCGRIELVRPIYHPLLFNLL 98
>emb|CDX72007.1| BnaC08g28670D [Brassica napus]
Length = 1535
Score = 139 bits (351), Expect = 6e-31
Identities = 64/98 (65%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPF- 289
MAQTT GAS VE V FSFMT E+VRKHS +++T P+LLD+VGRP PGGLYDP MGP
Sbjct: 1 MAQTTTEGASQVVESVRFSFMTEEDVRKHSVLQVTKPILLDNVGRPVPGGLYDPLMGPME 60
Query: 290 DEQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
D++S CK+C QR+ C GHCG IEL+ P Y+PLLFN+L
Sbjct: 61 DDRSKCKTCDQRNLDCPGHCGRIELVRPIYHPLLFNLL 98
>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
nucifera]
Length = 1676
Score = 138 bits (348), Expect = 1e-30
Identities = 64/97 (65%), Positives = 76/97 (78%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPFD 292
MA TEG A+ VE V FSF+T EEVR S KITNP + D+V RP PGGLYDPA+GP D
Sbjct: 1 MAHVTEG-ATEHVEAVRFSFLTDEEVRNLSFKKITNPTIFDNVERPLPGGLYDPALGPLD 59
Query: 293 EQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
+++PC+SCGQRSFHC GHCGHI+L+ P YNPLLF +L
Sbjct: 60 DRTPCQSCGQRSFHCPGHCGHIDLVLPVYNPLLFKIL 96
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus
communis]
Length = 1686
Score = 138 bits (347), Expect = 2e-30
Identities = 61/90 (67%), Positives = 74/90 (82%)
Frame = +2
Query: 134 GASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPFDEQSPCKS 313
GA+ +++ + FSF+T EEVRKHS VKITNP LLD V RP PGGLYDPA+GP E++ CK+
Sbjct: 10 GATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTICKT 69
Query: 314 CGQRSFHCTGHCGHIELISPAYNPLLFNML 403
CGQRS +C GHCGHI+L+SP YNPLLFN L
Sbjct: 70 CGQRSTNCPGHCGHIDLVSPVYNPLLFNFL 99
>ref|XP_013652021.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like
[Brassica napus]
Length = 1615
Score = 137 bits (346), Expect = 2e-30
Identities = 63/98 (64%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Frame = +2
Query: 113 MAQT-TEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPF 289
MAQT T GAS V+ V FSFMT ++VR HS +K+TNPVLLD+V RP PGGLYDP MGP
Sbjct: 1 MAQTQTTEGASQVVKSVRFSFMTEQDVRNHSVLKVTNPVLLDTVERPVPGGLYDPLMGPL 60
Query: 290 DEQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
D+++PCK+C + S C GHCGHIEL+ P Y+PLLFN+L
Sbjct: 61 DDKTPCKTCSRISLFCPGHCGHIELVYPIYHPLLFNLL 98
>ref|XP_012574995.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1654
Score = 137 bits (346), Expect = 2e-30
Identities = 64/97 (65%), Positives = 79/97 (81%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPFD 292
MA TEG A+ +V+ V FSF+T EE+ K S VKITNP+LLD++ P GGLYDPA+GPF
Sbjct: 1 MALATEG-ATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFH 59
Query: 293 EQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
E+SPC+SCGQ S+HC GH GHIEL+SPAYNPL+F+ML
Sbjct: 60 EKSPCQSCGQNSYHCPGHFGHIELVSPAYNPLMFSML 96
>ref|XP_009104070.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like
[Brassica rapa]
Length = 1625
Score = 137 bits (346), Expect = 2e-30
Identities = 63/98 (64%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Frame = +2
Query: 113 MAQT-TEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPF 289
MAQT T GAS V+ V FSFMT ++VR HS +K+TNPVLLD+V RP PGGLYDP MGP
Sbjct: 1 MAQTQTTEGASQVVKSVRFSFMTEQDVRNHSVLKVTNPVLLDTVERPVPGGLYDPLMGPL 60
Query: 290 DEQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
D+++PCK+C + S C GHCGHIEL+ P Y+PLLFN+L
Sbjct: 61 DDKTPCKTCSRISLFCPGHCGHIELVYPIYHPLLFNLL 98
>ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
raimondii] gi|763751831|gb|KJB19219.1| hypothetical
protein B456_003G089300 [Gossypium raimondii]
Length = 1674
Score = 137 bits (345), Expect = 3e-30
Identities = 62/97 (63%), Positives = 76/97 (78%)
Frame = +2
Query: 113 MAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGPFD 292
MAQ TEG A+ +V+ V F+FMT EEVRKHS +K+TN LLD + RP PGGLYDP +GP +
Sbjct: 1 MAQITEG-ATDSVDAVWFNFMTTEEVRKHSVLKLTNANLLDFMNRPMPGGLYDPVLGPLE 59
Query: 293 EQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
+++PCKSCG HC GHCGHI+L+SP YNPLLFN L
Sbjct: 60 DRTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFL 96
>ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Tarenaya
hassleriana]
Length = 1671
Score = 137 bits (345), Expect = 3e-30
Identities = 62/99 (62%), Positives = 77/99 (77%)
Frame = +2
Query: 107 LRMAQTTEGGASVAVEKVLFSFMTAEEVRKHSAVKITNPVLLDSVGRPTPGGLYDPAMGP 286
+ +Q+TEG V VE V FSFMT EEVRKHS +K+T+P+LLD+V RP PGGLYDP +GP
Sbjct: 1 MAQSQSTEGATQV-VEAVKFSFMTDEEVRKHSFLKVTSPILLDNVERPVPGGLYDPILGP 59
Query: 287 FDEQSPCKSCGQRSFHCTGHCGHIELISPAYNPLLFNML 403
D+++PCKSCG C GHCGHIEL+SP Y+PLLF+ L
Sbjct: 60 LDDRTPCKSCGLLRLSCPGHCGHIELVSPVYHPLLFHFL 98