BLASTX nr result

ID: Gardenia21_contig00043750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00043750
         (264 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP05344.1| unnamed protein product [Coffea canephora]            118   2e-24
ref|XP_009787838.1| PREDICTED: F-box protein At5g07670-like [Nic...    60   8e-07

>emb|CDP05344.1| unnamed protein product [Coffea canephora]
          Length = 491

 Score =  118 bits (296), Expect = 2e-24
 Identities = 54/59 (91%), Positives = 56/59 (94%)
 Frame = -1

Query: 177 MSCSPEKPNGNSPLKLWIKNKKALNNVLFTMRLQSLPKQPQTPSLMTPRPHKTQGVTFP 1
           MSCSPEKPNGNSPLKLWIKNKK LNNVLFTMRLQ+L KQPQTPSLMTPRPHKT+G TFP
Sbjct: 1   MSCSPEKPNGNSPLKLWIKNKKVLNNVLFTMRLQTLTKQPQTPSLMTPRPHKTEGFTFP 59


>ref|XP_009787838.1| PREDICTED: F-box protein At5g07670-like [Nicotiana sylvestris]
          Length = 496

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 31/52 (59%), Positives = 35/52 (67%), Gaps = 9/52 (17%)
 Frame = -1

Query: 177 MSCSPEKPNGNSPLK---------LWIKNKKALNNVLFTMRLQSLPKQPQTP 49
           MSCSPEKPN  SPLK         LW+KNKKALN+VLFTM LQS  +   +P
Sbjct: 1   MSCSPEKPNFRSPLKGPPSPSWTDLWLKNKKALNHVLFTMHLQSRSQSSPSP 52


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