BLASTX nr result

ID: Gardenia21_contig00043727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00043727
         (366 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP10914.1| unnamed protein product [Coffea canephora]             80   5e-13
ref|XP_012078241.1| PREDICTED: filament-like plant protein isofo...    62   2e-07
ref|XP_008219637.1| PREDICTED: filament-like plant protein isofo...    62   2e-07
ref|XP_011027528.1| PREDICTED: filament-like plant protein isofo...    60   6e-07
ref|XP_011027527.1| PREDICTED: filament-like plant protein isofo...    60   6e-07
ref|XP_011027526.1| PREDICTED: filament-like plant protein isofo...    60   6e-07
ref|XP_011027523.1| PREDICTED: filament-like plant protein isofo...    60   6e-07
ref|XP_011027521.1| PREDICTED: filament-like plant protein isofo...    60   6e-07
ref|XP_002513759.1| DNA double-strand break repair rad50 ATPase,...    59   1e-06
ref|XP_006472782.1| PREDICTED: filament-like plant protein-like ...    59   2e-06

>emb|CDP10914.1| unnamed protein product [Coffea canephora]
          Length = 664

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 46/64 (71%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
 Frame = -1

Query: 183 PGETDSSGSSLSERYSDEQQ---EEVKDSPNDHTQSPEVTSXXXXXXXXXXXXXKNLTAK 13
           PGETDSSGSSLSERYSDEQQ   EEVKDSPND TQSPEVTS             KNLTAK
Sbjct: 17  PGETDSSGSSLSERYSDEQQIEPEEVKDSPNDRTQSPEVTSKVVLADEEVTDTVKNLTAK 76

Query: 12  LSAA 1
           LS+A
Sbjct: 77  LSSA 80


>ref|XP_012078241.1| PREDICTED: filament-like plant protein isoform X1 [Jatropha curcas]
           gi|802635970|ref|XP_012078242.1| PREDICTED:
           filament-like plant protein isoform X1 [Jatropha curcas]
           gi|802636033|ref|XP_012078243.1| PREDICTED:
           filament-like plant protein isoform X1 [Jatropha curcas]
          Length = 682

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
 Frame = -1

Query: 183 PGETDSSGS--SLSERYSDEQQEEVKDSPNDHTQSPEVTSXXXXXXXXXXXXXKNLTAKL 10
           PGET+SSGS  S SER+SDEQQ+ +K SPN+ TQSPEVTS             + LT KL
Sbjct: 17  PGETESSGSISSQSERFSDEQQDNLKASPNNETQSPEVTSKTVVRDEDVNDSVRILTEKL 76

Query: 9   SAA 1
           SAA
Sbjct: 77  SAA 79


>ref|XP_008219637.1| PREDICTED: filament-like plant protein isoform X1 [Prunus mume]
          Length = 704

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 38/62 (61%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = -1

Query: 180 GETDSSGS--SLSERYSDEQQEEVKDSPNDHTQSPEVTSXXXXXXXXXXXXXKNLTAKLS 7
           GETDSSGS  S SERYSDEQQE +K SPN  TQSPEVTS             K+LT +LS
Sbjct: 17  GETDSSGSVSSHSERYSDEQQEALKASPNHDTQSPEVTSKAASNAEDVNDSVKSLTERLS 76

Query: 6   AA 1
           AA
Sbjct: 77  AA 78


>ref|XP_011027528.1| PREDICTED: filament-like plant protein isoform X7 [Populus
           euphratica]
          Length = 665

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 37/63 (58%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = -1

Query: 183 PGETDSSGS--SLSERYSDEQQEEVKDSPNDHTQSPEVTSXXXXXXXXXXXXXKNLTAKL 10
           PGETDSSGS  S SER+SD+QQE  K SP D  QSPEVTS             K+LT KL
Sbjct: 17  PGETDSSGSISSHSERFSDDQQEPSKASPTDSAQSPEVTSKTITTDEDVNDRIKSLTDKL 76

Query: 9   SAA 1
           SAA
Sbjct: 77  SAA 79


>ref|XP_011027527.1| PREDICTED: filament-like plant protein isoform X6 [Populus
           euphratica]
          Length = 686

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 37/63 (58%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = -1

Query: 183 PGETDSSGS--SLSERYSDEQQEEVKDSPNDHTQSPEVTSXXXXXXXXXXXXXKNLTAKL 10
           PGETDSSGS  S SER+SD+QQE  K SP D  QSPEVTS             K+LT KL
Sbjct: 17  PGETDSSGSISSHSERFSDDQQEPSKASPTDSAQSPEVTSKTITTDEDVNDRIKSLTDKL 76

Query: 9   SAA 1
           SAA
Sbjct: 77  SAA 79


>ref|XP_011027526.1| PREDICTED: filament-like plant protein isoform X5 [Populus
           euphratica]
          Length = 687

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 37/63 (58%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = -1

Query: 183 PGETDSSGS--SLSERYSDEQQEEVKDSPNDHTQSPEVTSXXXXXXXXXXXXXKNLTAKL 10
           PGETDSSGS  S SER+SD+QQE  K SP D  QSPEVTS             K+LT KL
Sbjct: 17  PGETDSSGSISSHSERFSDDQQEPSKASPTDSAQSPEVTSKTITTDEDVNDRIKSLTDKL 76

Query: 9   SAA 1
           SAA
Sbjct: 77  SAA 79


>ref|XP_011027523.1| PREDICTED: filament-like plant protein isoform X2 [Populus
           euphratica]
          Length = 697

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 37/63 (58%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = -1

Query: 183 PGETDSSGS--SLSERYSDEQQEEVKDSPNDHTQSPEVTSXXXXXXXXXXXXXKNLTAKL 10
           PGETDSSGS  S SER+SD+QQE  K SP D  QSPEVTS             K+LT KL
Sbjct: 17  PGETDSSGSISSHSERFSDDQQEPSKASPTDSAQSPEVTSKTITTDEDVNDRIKSLTDKL 76

Query: 9   SAA 1
           SAA
Sbjct: 77  SAA 79


>ref|XP_011027521.1| PREDICTED: filament-like plant protein isoform X1 [Populus
           euphratica] gi|743845586|ref|XP_011027522.1| PREDICTED:
           filament-like plant protein isoform X1 [Populus
           euphratica]
          Length = 698

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 37/63 (58%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = -1

Query: 183 PGETDSSGS--SLSERYSDEQQEEVKDSPNDHTQSPEVTSXXXXXXXXXXXXXKNLTAKL 10
           PGETDSSGS  S SER+SD+QQE  K SP D  QSPEVTS             K+LT KL
Sbjct: 17  PGETDSSGSISSHSERFSDDQQEPSKASPTDSAQSPEVTSKTITTDEDVNDRIKSLTDKL 76

Query: 9   SAA 1
           SAA
Sbjct: 77  SAA 79


>ref|XP_002513759.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus
           communis] gi|223546845|gb|EEF48342.1| DNA double-strand
           break repair rad50 ATPase, putative [Ricinus communis]
          Length = 711

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/63 (58%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
 Frame = -1

Query: 183 PGETDSSGS--SLSERYSDEQQEEVKDSPNDHTQSPEVTSXXXXXXXXXXXXXKNLTAKL 10
           PGET+SSGS  SLSER+SDEQ + +K SPN+ TQSPEVTS             K+LT KL
Sbjct: 17  PGETESSGSISSLSERFSDEQ-DNLKASPNNDTQSPEVTSKSTARDGDVNDSIKSLTEKL 75

Query: 9   SAA 1
           SAA
Sbjct: 76  SAA 78


>ref|XP_006472782.1| PREDICTED: filament-like plant protein-like isoform X1 [Citrus
           sinensis] gi|568837543|ref|XP_006472783.1| PREDICTED:
           filament-like plant protein-like isoform X2 [Citrus
           sinensis] gi|568837545|ref|XP_006472784.1| PREDICTED:
           filament-like plant protein-like isoform X3 [Citrus
           sinensis]
          Length = 723

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/63 (58%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = -1

Query: 183 PGETDSSGS--SLSERYSDEQQEEVKDSPNDHTQSPEVTSXXXXXXXXXXXXXKNLTAKL 10
           PGETDSSGS  S SERYSD+Q E +K SPND+ QSPEVTS             + LT KL
Sbjct: 17  PGETDSSGSISSHSERYSDDQ-EALKASPNDNAQSPEVTSKAVANGEDISDNVRALTEKL 75

Query: 9   SAA 1
           SAA
Sbjct: 76  SAA 78


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