BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00041425
         (338 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP05676.1| unnamed protein product [Coffea canephora]            153   9e-40
emb|CDP16470.1| unnamed protein product [Coffea canephora]            153   9e-40
ref|XP_009354425.1| PREDICTED: ribosomal RNA small subunit methy...    93   6e-20
ref|XP_008448880.1| PREDICTED: ribosomal RNA small subunit methy...    85   2e-16
ref|XP_008218955.1| PREDICTED: ribosomal RNA small subunit methy...    79   2e-15
ref|XP_006836395.1| PREDICTED: ribosomal RNA small subunit methy...    76   1e-14
ref|XP_010678392.1| PREDICTED: ribosomal RNA small subunit methy...    77   2e-14
ref|XP_012072669.1| PREDICTED: ribosomal RNA small subunit methy...    71   3e-13
gb|KNA03487.1| hypothetical protein SOVF_208590 [Spinacia oleracea]    75   3e-13
ref|XP_010936775.1| PREDICTED: ribosomal RNA small subunit methy...    77   4e-13
ref|XP_009763268.1| PREDICTED: ribosomal RNA small subunit methy...    72   6e-13
gb|AFK49467.1| unknown [Lotus japonicus]                               70   7e-13
gb|KJB48969.1| hypothetical protein B456_008G095800, partial [Go...    73   1e-12
gb|KHG03814.1| Ribosomal RNA small subunit methyltransferase NEP...    73   1e-12
ref|XP_010262358.1| PREDICTED: ribosomal RNA small subunit methy...    69   2e-12
gb|KHG06594.1| Ribosomal RNA small subunit methyltransferase NEP...    72   2e-12
ref|XP_010108526.1| Ribosomal RNA small subunit methyltransferas...    70   3e-12
ref|XP_012437802.1| PREDICTED: ribosomal RNA small subunit methy...    71   4e-12
gb|KJB49608.1| hypothetical protein B456_008G128200 [Gossypium r...    71   4e-12
ref|XP_008244841.1| PREDICTED: ribosomal RNA small subunit methy...    69   5e-12

>emb|CDP05676.1| unnamed protein product [Coffea canephora]
          Length = 307

 Score =  153 bits (387), Expect(2) = 9e-40
 Identities = 81/133 (60%), Positives = 90/133 (67%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F +++  +PYDYRPDIVHE+L+DILGSRLNMAG+VQ VFVKTDLGHLIKIKPHVRI PTL
Sbjct: 131 FLRKKNMNPYDYRPDIVHEILVDILGSRLNMAGMVQAVFVKTDLGHLIKIKPHVRIPPTL 190

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
           GKFCAM                                     I LSVSSPKAVRLRD+V
Sbjct: 191 GKFCAMMSQLLQKFSIKARGGGEKLMQLIENPLVKHLPVNSRIIGLSVSSPKAVRLRDYV 250

Query: 53  DDVGNDCTPVFVL 15
           DDVGNDCTPVFV+
Sbjct: 251 DDVGNDCTPVFVI 263



 Score = 37.0 bits (84), Expect(2) = 9e-40
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKNM 281
           TYEILN D HADFLRKKNM
Sbjct: 119 TYEILNPDKHADFLRKKNM 137


>emb|CDP16470.1| unnamed protein product [Coffea canephora]
          Length = 307

 Score =  153 bits (387), Expect(2) = 9e-40
 Identities = 81/133 (60%), Positives = 90/133 (67%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F +++  +PYDYRPDIVHE+L+DILGSRLNMAG+VQ VFVKTDLGHLIKIKPHVRI PTL
Sbjct: 131 FLRKKNMNPYDYRPDIVHEILVDILGSRLNMAGMVQAVFVKTDLGHLIKIKPHVRIPPTL 190

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
           GKFCAM                                     I LSVSSPKAVRLRD+V
Sbjct: 191 GKFCAMMSQLLQKFSIKARGGGEKLMQLIDNPLVKHLPVNSRIIGLSVSSPKAVRLRDYV 250

Query: 53  DDVGNDCTPVFVL 15
           DDVGNDCTPVFV+
Sbjct: 251 DDVGNDCTPVFVI 263



 Score = 37.0 bits (84), Expect(2) = 9e-40
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKNM 281
           TYEILN D HADFLRKKNM
Sbjct: 119 TYEILNPDKHADFLRKKNM 137


>ref|XP_009354425.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
           [Pyrus x bretschneideri]
          Length = 210

 Score = 93.2 bits (230), Expect(2) = 6e-20
 Identities = 55/133 (41%), Positives = 73/133 (54%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F +++  DPY YRPDIVHE L+ I+ SRL MAG++Q V+VKTD G LIK++P+ RI  +L
Sbjct: 34  FLRKKNMDPYKYRPDIVHEALLQIMDSRLCMAGILQPVYVKTDEGVLIKVEPYARIPESL 93

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            KFCAM                                     I LSVSS K V+LR++V
Sbjct: 94  DKFCAMMSQLLQKLRIKAKGRRDTLLRVVQNPLSQHLPANSVKIGLSVSSQKEVQLREYV 153

Query: 53  DDVGNDCTPVFVL 15
           + V N+   VFV+
Sbjct: 154 NAVSNNANLVFVV 166



 Score = 30.8 bits (68), Expect(2) = 6e-20
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -2

Query: 334 YEILNLD*HADFLRKKNM 281
           Y+ILN + H DFLRKKNM
Sbjct: 23  YQILNPEIHGDFLRKKNM 40


>ref|XP_008448880.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
           [Cucumis melo]
          Length = 210

 Score = 85.1 bits (209), Expect(2) = 2e-16
 Identities = 52/133 (39%), Positives = 65/133 (48%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F + +  DPY YRPDIVHE L+ I+ SR+ MAGLVQ VFV+TD G LIK+ PH RI  +L
Sbjct: 34  FLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGVLIKVDPHTRIPESL 93

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            +FC M                                     I LS SS K +  RD++
Sbjct: 94  DEFCDMMSQLLQKLSTKAKGNRGKLLQVVKNPVIQYLPVNCVKIGLSSSSKKVIEPRDYL 153

Query: 53  DDVGNDCTPVFVL 15
               ND   VFV+
Sbjct: 154 KTFSNDVNLVFVI 166



 Score = 26.9 bits (58), Expect(2) = 2e-16
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 334 YEILNLD*HADFLRKKNM 281
           Y ILN + HA+FLR+K M
Sbjct: 23  YHILNQEKHAEFLRRKRM 40


>ref|XP_008218955.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
           [Prunus mume]
          Length = 258

 Score = 79.0 bits (193), Expect(2) = 2e-15
 Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F + ++ DPY YRPDIVHE L  I+ +RL  AG +  V++KTD G LIK++PH  I  +L
Sbjct: 82  FLRRKKMDPYKYRPDIVHEALRQIMDTRLCKAGRLHAVYIKTDEGVLIKVEPHATIPESL 141

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            KFC M                                     I LS+SS KAV LRD+V
Sbjct: 142 EKFCYMMSQLLQKLSIKSTGRRERLLRVVKNPIAQHLPANSLKIGLSMSSQKAVDLRDYV 201

Query: 53  DDVGNDCTPVFVL 15
             V ++   VFV+
Sbjct: 202 HAVSDNVNLVFVV 214



 Score = 30.0 bits (66), Expect(2) = 2e-15
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKNM 281
           TY+ILN   HADFLR+K M
Sbjct: 70  TYQILNPQVHADFLRRKKM 88


>ref|XP_006836395.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1
           [Amborella trichopoda] gi|769820242|ref|XP_011620791.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           NEP1 [Amborella trichopoda] gi|548838913|gb|ERM99248.1|
           hypothetical protein AMTR_s00092p00137780 [Amborella
           trichopoda]
          Length = 272

 Score = 76.3 bits (186), Expect(2) = 1e-14
 Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           + K++  DP  YRPDI+H+ L+ +L S LN AG ++ V+V+T+   LI++ PHVRI  T+
Sbjct: 96  YLKKKNRDPAAYRPDIIHQALLAVLDSPLNKAGRLKAVYVQTEKNVLIRVNPHVRIPRTI 155

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            +FC +                                     I LS SSPK V+L D+V
Sbjct: 156 KRFCGLMVQLLQKLSIRATNGPDILLRVVKNPVTRHLPIDSRRIGLSYSSPKVVQLHDYV 215

Query: 53  DDVGNDCTPVFVL 15
            D  +D   VFV+
Sbjct: 216 TDAKDDVNLVFVV 228



 Score = 29.6 bits (65), Expect(2) = 1e-14
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKN 284
           TY+ILN D HA +L+KKN
Sbjct: 84  TYQILNCDDHATYLKKKN 101


>ref|XP_010678392.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1-like
           [Beta vulgaris subsp. vulgaris]
          Length = 284

 Score = 77.4 bits (189), Expect(2) = 2e-14
 Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           + ++++ +PYD+RPDIVHE L+ I+ SRL +AG ++ V+++TD G LIK++P+  I  TL
Sbjct: 108 YLRKKKLNPYDHRPDIVHEALLQIMDSRLRLAGRLRAVYIRTDEGILIKVEPNSMIPRTL 167

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
           G FC M                                     I LS SS KAV+LR++V
Sbjct: 168 GNFCNMMAELLQTLRIKAKGHHKKLLRVVANPVSKYLPPMSRKIGLSFSSEKAVQLREYV 227

Query: 53  DDVGNDCTPVFVL 15
             V  +   VFV+
Sbjct: 228 SGVNCNEDVVFVV 240



 Score = 27.7 bits (60), Expect(2) = 2e-14
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2

Query: 334 YEILNLD*HADFLRKKNM 281
           Y+IL+ D HAD+LRKK +
Sbjct: 97  YQILSSDEHADYLRKKKL 114


>ref|XP_012072669.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Jatropha curcas] gi|643730276|gb|KDP37829.1|
           hypothetical protein JCGZ_06731 [Jatropha curcas]
          Length = 299

 Score = 70.9 bits (172), Expect(2) = 3e-13
 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F ++   +P DYRPDIV++ L+ IL S +N AG ++ V+VKT+ G L ++KPHVRI  T 
Sbjct: 123 FLRKNNKNPADYRPDIVYQALLSILDSPVNKAGRLRAVYVKTEKGVLFEVKPHVRIPRTY 182

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            +F  +                                     I  S SS K V++R +V
Sbjct: 183 KRFSGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPANSRKIGFSFSSEKLVKIRKYV 242

Query: 53  DDVGNDCTPVFVL 15
           D +G+D   VFV+
Sbjct: 243 DAIGDDTDLVFVV 255



 Score = 30.4 bits (67), Expect(2) = 3e-13
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKN 284
           TY+ILN D HA+FLRK N
Sbjct: 111 TYQILNSDDHANFLRKNN 128


>gb|KNA03487.1| hypothetical protein SOVF_208590 [Spinacia oleracea]
          Length = 286

 Score = 74.7 bits (182), Expect(2) = 3e-13
 Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           + ++++ DPY YRPDIVHE L DI+ SRL+ +G ++ V+++T+ G LIK++P+ +I   L
Sbjct: 110 YLRKKKMDPYKYRPDIVHEALNDIMNSRLSKSGRLKAVYIRTEDGVLIKVEPYAKIPSDL 169

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
             FC+M                                     I LS SS KAV LR+ V
Sbjct: 170 ESFCSMMAELLQTLSIKAKGNRKKLLRVVANPVTKYLPPSSPKIGLSFSSEKAVELREHV 229

Query: 53  DDVGNDCTPVFVL 15
             +  D   VFV+
Sbjct: 230 SGINRDEDVVFVV 242



 Score = 26.6 bits (57), Expect(2) = 3e-13
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 334 YEILNLD*HADFLRKKNM 281
           Y+ILN + HA +LRKK M
Sbjct: 99  YQILNSNEHASYLRKKKM 116


>ref|XP_010936775.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1
           isoform X2 [Elaeis guineensis]
          Length = 250

 Score = 77.4 bits (189), Expect(2) = 4e-13
 Identities = 39/89 (43%), Positives = 57/89 (64%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           + K++  +P DYRPDI+H+ L+ I  S +  AG +Q V+VKTD G L +IKP+VRI  T 
Sbjct: 110 YLKKQNRNPADYRPDIIHQALLAIFDSPVTKAGRLQAVYVKTDKGVLFEIKPYVRIPRTF 169

Query: 122 GKFCAMIWLSVSSPKAVRLRDFVDDVGND 36
            +F  ++ LS SS K V L ++V    +D
Sbjct: 170 KRFSGLMCLSYSSEKLVDLNNYVAAAASD 198



 Score = 23.5 bits (49), Expect(2) = 4e-13
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 334 YEILNLD*HADFLRKKN 284
           + ILN D HA +L+K+N
Sbjct: 99  FHILNSDEHAHYLKKQN 115


>ref|XP_009763268.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like
           [Nicotiana sylvestris]
          Length = 276

 Score = 72.0 bits (175), Expect(2) = 6e-13
 Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F K+   +P DYRPDI H+ ++ IL SR+N AG ++ ++VKT+ G L ++KPHVRI  T 
Sbjct: 100 FLKKNNRNPSDYRPDIAHQAMLTILDSRVNKAGRLKALYVKTEKGVLFEVKPHVRIPRTF 159

Query: 122 GKF-------------------------------------CAMIWLSVSSPKAVRLRDFV 54
            +F                                     C  I  S SS K V ++D+V
Sbjct: 160 KRFAGIMLQLLQKLSITAVGKREKLLRVIKNPVSQYLPIDCRKIGFSHSSEKLVDIQDYV 219

Query: 53  DDVGNDCTPVFVL 15
           + + N+   VFV+
Sbjct: 220 NGINNETNLVFVV 232



 Score = 28.5 bits (62), Expect(2) = 6e-13
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKN 284
           TY++LN D HA+FL+K N
Sbjct: 88  TYQLLNSDEHANFLKKNN 105


>gb|AFK49467.1| unknown [Lotus japonicus]
          Length = 272

 Score = 70.5 bits (171), Expect(2) = 7e-13
 Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F ++   +P DYRPDI H+ L+ IL S LN AG +Q V++KT+ G LI++KP+VRI  T 
Sbjct: 96  FLRKNNKNPGDYRPDITHQALLSILDSPLNKAGRLQAVYIKTEKGVLIEVKPYVRIPRTF 155

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            +F  +                                     I LS SS K V + D+V
Sbjct: 156 KRFSGVMLQLLQKLSISAAGKHEKLLRTIKNPVTQYLPVNSRKIGLSFSSEKLVNMNDYV 215

Query: 53  DDVGNDCTPVFVL 15
             V +D   VFV+
Sbjct: 216 STVPSDMNLVFVV 228



 Score = 29.6 bits (65), Expect(2) = 7e-13
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKN 284
           TY++LN D HA+FLRK N
Sbjct: 84  TYQLLNSDDHANFLRKNN 101


>gb|KJB48969.1| hypothetical protein B456_008G095800, partial [Gossypium raimondii]
          Length = 270

 Score = 73.2 bits (178), Expect(2) = 1e-12
 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 30/126 (23%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRI---- 135
           F ++   +P DYRPDI H+ L+ IL S +N AG +Q V+V+ + G L ++KPHVRI    
Sbjct: 101 FLRKNNNNPADYRPDITHQALLSILDSPINKAGRLQAVYVRIEKGVLFEVKPHVRIPRTY 160

Query: 134 --LPTLGKF--CAMIW----------------------LSVSSPKAVRLRDFVDDVGNDC 33
             + T  K+  C   W                       S SS K V++R +VD VG+D 
Sbjct: 161 NAIDTKSKYNCCWQAWKVLQVIKNHVTNYFLVNSHKIGFSYSSDKLVKMRKYVDAVGDDV 220

Query: 32  TPVFVL 15
             VFV+
Sbjct: 221 NLVFVV 226



 Score = 26.6 bits (57), Expect(2) = 1e-12
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKN 284
           ++++LN D HA+FLRK N
Sbjct: 89  SFQLLNSDDHANFLRKNN 106


>gb|KHG03814.1| Ribosomal RNA small subunit methyltransferase NEP1 [Gossypium
           arboreum]
          Length = 289

 Score = 72.8 bits (177), Expect(2) = 1e-12
 Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F ++   +P DYRPDI H+ L+ IL S +N AG +Q V+V+T+ G L ++KPHVRI  T 
Sbjct: 113 FLRKNNKNPADYRPDITHQALLSILDSPVNKAGRLQAVYVRTEKGVLFEVKPHVRIPRTY 172

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            +F  +                                     I  S SS K V++R +V
Sbjct: 173 KRFSGIMLQLLQKLNITAVGKREKLLRVIKNPVTNYFPVNSRKIGFSYSSDKLVKMRKYV 232

Query: 53  DDVGNDCTPVFVL 15
           D VG+D   VFV+
Sbjct: 233 DAVGDDVNLVFVV 245



 Score = 26.6 bits (57), Expect(2) = 1e-12
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKN 284
           ++++LN D HA+FLRK N
Sbjct: 101 SFQLLNSDDHANFLRKNN 118


>ref|XP_010262358.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Nelumbo nucifera]
          Length = 296

 Score = 69.3 bits (168), Expect(2) = 2e-12
 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F ++   +P DYRPDI+H+ L+ +L S LN AG+++ V+VKT  G L ++KP+VR+  T 
Sbjct: 120 FLRKNNRNPADYRPDIIHQALLAVLDSPLNKAGMIKAVYVKTGKGVLFEVKPYVRMPRTS 179

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            +F  +                                     I LS SS K V+LRD+V
Sbjct: 180 KRFYGLMLQLLQKLSVTATGKREKLLRVIKNPVTQYLPPDSRKIGLSFSSNKLVQLRDYV 239

Query: 53  DDVGNDCTPVFVL 15
              G+D   VFV+
Sbjct: 240 AAAGDDQQLVFVV 252



 Score = 29.6 bits (65), Expect(2) = 2e-12
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKN 284
           TY ILN D HA+FLRK N
Sbjct: 108 TYHILNSDDHANFLRKNN 125


>gb|KHG06594.1| Ribosomal RNA small subunit methyltransferase NEP1 [Gossypium
           arboreum]
          Length = 289

 Score = 72.4 bits (176), Expect(2) = 2e-12
 Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F ++   +P DYRPDI H+ L+ IL S +N AG +Q V+V+T+ G L ++KPHVRI  T 
Sbjct: 113 FLRKNNKNPADYRPDITHQALLSILDSPVNKAGRLQAVYVRTEKGVLFEVKPHVRIPRTY 172

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            +F  +                                     I  S SS K V++R +V
Sbjct: 173 KRFSGIMLQLLQKLNITAVGKREKLLRVIKNPVTNYFPVNSRKIGFSYSSDKLVKMRKYV 232

Query: 53  DDVGNDCTPVFVL 15
           D VG+D   +FV+
Sbjct: 233 DAVGDDVNIIFVV 245



 Score = 26.6 bits (57), Expect(2) = 2e-12
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKN 284
           ++++LN D HA+FLRK N
Sbjct: 101 SFQLLNSDDHANFLRKNN 118


>ref|XP_010108526.1| Ribosomal RNA small subunit methyltransferase NEP1 [Morus
           notabilis] gi|587932586|gb|EXC19626.1| Ribosomal RNA
           small subunit methyltransferase NEP1 [Morus notabilis]
          Length = 265

 Score = 70.5 bits (171), Expect(2) = 3e-12
 Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F +++  +P DYRPDI H+ L+ IL S LN AG ++ V+V+T+LG LI++KP VRI  T 
Sbjct: 96  FLRKKGKNPADYRPDIAHQALLMILDSPLNKAGRLRAVYVRTELGVLIEVKPFVRIPRTF 155

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            +F  +                                     I LS SS K V++RD+V
Sbjct: 156 KRFAGIMLQLLQKLSISAVGKREKLLRVIKNPVTQYLPVNSRKIGLSYSSEKLVKIRDYV 215

Query: 53  DDVGNDCTPVFVL 15
               ND   VFV+
Sbjct: 216 AASSNDMDHVFVV 228



 Score = 27.7 bits (60), Expect(2) = 3e-12
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -2

Query: 334 YEILNLD*HADFLRKK 287
           Y++LN D H+DFLRKK
Sbjct: 85  YKLLNSDDHSDFLRKK 100


>ref|XP_012437802.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1-like
           [Gossypium raimondii] gi|763782536|gb|KJB49607.1|
           hypothetical protein B456_008G128200 [Gossypium
           raimondii]
          Length = 288

 Score = 71.2 bits (173), Expect(2) = 4e-12
 Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F ++   +P DYRPDI H+ L+ IL S +N AG +Q V+V+T+ G L ++KPHVRI  T 
Sbjct: 112 FLRKNNKNPADYRPDITHQALLSILDSPVNKAGRLQAVYVRTEKGVLFEVKPHVRIPRTY 171

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            +F  +                                     I  S SS K  ++R +V
Sbjct: 172 KRFSGIMLQLLQKLNITAVGKREKLLRVIKNPVTNYFPVNSRKIGFSYSSDKLAKMRKYV 231

Query: 53  DDVGNDCTPVFVL 15
           D VG+D   VFV+
Sbjct: 232 DAVGDDVNLVFVV 244



 Score = 26.6 bits (57), Expect(2) = 4e-12
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKN 284
           ++++LN D HA+FLRK N
Sbjct: 100 SFQLLNSDDHANFLRKNN 117


>gb|KJB49608.1| hypothetical protein B456_008G128200 [Gossypium raimondii]
          Length = 273

 Score = 71.2 bits (173), Expect(2) = 4e-12
 Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 37/133 (27%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F ++   +P DYRPDI H+ L+ IL S +N AG +Q V+V+T+ G L ++KPHVRI  T 
Sbjct: 112 FLRKNNKNPADYRPDITHQALLSILDSPVNKAGRLQAVYVRTEKGVLFEVKPHVRIPRTY 171

Query: 122 GKFCAM-------------------------------------IWLSVSSPKAVRLRDFV 54
            +F  +                                     I  S SS K  ++R +V
Sbjct: 172 KRFSGIMLQLLQKLNITAVGKREKLLRVIKNPVTNYFPVNSRKIGFSYSSDKLAKMRKYV 231

Query: 53  DDVGNDCTPVFVL 15
           D VG+D   VFV+
Sbjct: 232 DAVGDDVNLVFVV 244



 Score = 26.6 bits (57), Expect(2) = 4e-12
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKN 284
           ++++LN D HA+FLRK N
Sbjct: 100 SFQLLNSDDHANFLRKNN 117


>ref|XP_008244841.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Prunus mume]
          Length = 302

 Score = 68.9 bits (167), Expect(2) = 5e-12
 Identities = 32/67 (47%), Positives = 47/67 (70%)
 Frame = -1

Query: 302 FFKEEEYDPYDYRPDIVHEVLIDILGSRLNMAGLVQDVFVKTDLGHLIKIKPHVRILPTL 123
           F ++   DP  YRPDIVH+ L+ +L S +N AG +++V+V+T  G LI+IKPHVRI  T 
Sbjct: 126 FLRKNNRDPALYRPDIVHQALLMVLDSPINKAGKLRNVYVRTAAGVLIEIKPHVRIPRTF 185

Query: 122 GKFCAMI 102
            +FC ++
Sbjct: 186 KRFCGVM 192



 Score = 28.5 bits (62), Expect(2) = 5e-12
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2

Query: 337 TYEILNLD*HADFLRKKN 284
           TY++LN D H++FLRK N
Sbjct: 114 TYQLLNSDDHSNFLRKNN 131