BLASTX nr result
ID: Gardenia21_contig00041401
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00041401
(432 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP10074.1| unnamed protein product [Coffea canephora] 255 8e-66
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 186 6e-45
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 185 1e-44
ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I sub... 181 2e-43
ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I sub... 178 1e-42
ref|XP_012073009.1| PREDICTED: DNA-directed RNA polymerase I sub... 171 2e-40
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 167 2e-39
ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I sub... 160 3e-37
ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I sub... 160 3e-37
gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus g... 160 3e-37
ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I sub... 156 5e-36
ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I sub... 151 2e-34
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub... 151 2e-34
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 151 2e-34
ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I sub... 146 7e-33
gb|KHG00372.1| DNA-directed RNA polymerase I subunit rpa[2] [Gos... 144 3e-32
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 140 5e-31
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ... 140 5e-31
gb|KDO57201.1| hypothetical protein CISIN_1g0468252mg, partial [... 137 4e-30
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub... 137 4e-30
>emb|CDP10074.1| unnamed protein product [Coffea canephora]
Length = 1680
Score = 255 bits (652), Expect = 8e-66
Identities = 124/141 (87%), Positives = 128/141 (90%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
NMLYNLLQRTCFYCFHFR+S EEVDKCV QLERIAKGDVIGAKR DAASSADL NSEDSE
Sbjct: 95 NMLYNLLQRTCFYCFHFRSSTEEVDKCVLQLERIAKGDVIGAKRLDAASSADLDNSEDSE 154
Query: 250 GSHVSCGNVYHGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIKK 71
GSHVSCGNVYHGAE EH+KQPSWDSFQFTEAMSVLNMFLKPK SKC +C AKNPKIKK
Sbjct: 155 GSHVSCGNVYHGAE---EHMKQPSWDSFQFTEAMSVLNMFLKPKLSKCGKCEAKNPKIKK 211
Query: 70 PTFGWFHMDVSNAVIRANIMR 8
PTFGWFHM VSNA RANI+R
Sbjct: 212 PTFGWFHMVVSNAETRANIIR 232
>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
tuberosum]
Length = 1675
Score = 186 bits (472), Expect = 6e-45
Identities = 88/138 (63%), Positives = 107/138 (77%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
NML+NLLQRTCFYCFHFRASR EV+KCV +LE IAKGDV+GAK DA S + + E+SE
Sbjct: 89 NMLHNLLQRTCFYCFHFRASRAEVEKCVSELELIAKGDVVGAKMIDALSPDNSTDREESE 148
Query: 250 GSHVSCGNVYHGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIKK 71
GSH+SC +D E+ K+PSWD+FQFTEAM+V++ LK K KCS C+AKNPKI+K
Sbjct: 149 GSHMSCAMDDLNMQDHREYNKRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRK 208
Query: 70 PTFGWFHMDVSNAVIRAN 17
P+FG FHMD+SN IR N
Sbjct: 209 PSFGRFHMDISNKQIREN 226
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Solanum
lycopersicum]
Length = 1677
Score = 185 bits (469), Expect = 1e-44
Identities = 88/138 (63%), Positives = 106/138 (76%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
NML+NLLQRTCFYCFHFRASR EV+KCV +LE IAKGDV+GAK DA S + + E+SE
Sbjct: 89 NMLHNLLQRTCFYCFHFRASRAEVEKCVSELELIAKGDVVGAKMIDALSPDNSTDREESE 148
Query: 250 GSHVSCGNVYHGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIKK 71
GSH+SC D E+ K+PSWD+FQFTEAM+V++ LK K KCS C+AKNPKI+K
Sbjct: 149 GSHMSCTMDDLNVRDHCEYNKRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRK 208
Query: 70 PTFGWFHMDVSNAVIRAN 17
P+FG FHMD+SN IR N
Sbjct: 209 PSFGRFHMDISNKQIREN 226
>ref|XP_009605274.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
tomentosiformis]
Length = 1938
Score = 181 bits (459), Expect = 2e-43
Identities = 86/141 (60%), Positives = 107/141 (75%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
NML+NLLQRTCFYCFHFRAS+EEV+KCV +LE IAKGDVIGAK D S + + E+SE
Sbjct: 348 NMLHNLLQRTCFYCFHFRASKEEVEKCVSELELIAKGDVIGAKTMDVLSPDNSADREESE 407
Query: 250 GSHVSCGNVYHGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIKK 71
GSH+SC +D+SE+ K+PSWD+FQFTEAM+V++ LK K KCS C KNPKI K
Sbjct: 408 GSHMSCTTDDLNLQDRSEYNKRPSWDNFQFTEAMAVIDRILKTKSEKCSNCETKNPKINK 467
Query: 70 PTFGWFHMDVSNAVIRANIMR 8
P+FG FHMD+S+ I N ++
Sbjct: 468 PSFGRFHMDISSKQIIFNYIK 488
>ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
sylvestris]
Length = 1681
Score = 178 bits (452), Expect = 1e-42
Identities = 85/141 (60%), Positives = 106/141 (75%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
NML+NLLQRTCFYCFHFRAS+EEV+KCV +LE IAKGDVIG K D S + + E+SE
Sbjct: 91 NMLHNLLQRTCFYCFHFRASKEEVEKCVSELELIAKGDVIGPKTMDVLSPDNSADREESE 150
Query: 250 GSHVSCGNVYHGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIKK 71
GSH+SC +D+SE+ K+PSWD+FQFTEAM+V++ LK K KCS C KNPKI K
Sbjct: 151 GSHMSCTTDDLKLQDRSEYNKRPSWDNFQFTEAMAVIDRILKTKSEKCSNCETKNPKINK 210
Query: 70 PTFGWFHMDVSNAVIRANIMR 8
P+FG FHMD+S+ I N ++
Sbjct: 211 PSFGRFHMDISSKQIIFNYIK 231
>ref|XP_012073009.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Jatropha
curcas]
Length = 1741
Score = 171 bits (433), Expect = 2e-40
Identities = 83/145 (57%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N L+ LLQRTCFYCFHFR R +VDKCV QLE I KGD++GAKR D+ ++ + E+S+
Sbjct: 94 NFLHKLLQRTCFYCFHFRIHRGQVDKCVKQLELIVKGDIVGAKRLDSVLPSETLYPEESD 153
Query: 250 GSHVSCGNVYHGAE-DQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIK 74
GSH SC V+ GA+ EH+KQ W S QF+EA SVLN FL PKF KC C A NP I
Sbjct: 154 GSHESCSTVHSGAQCHNGEHMKQKEWTSLQFSEATSVLNTFLMPKFKKCKNCGAVNPNIT 213
Query: 73 KPTFGWFHMD-VSNAVIRANIMRDR 2
KP FGWF+ +++A IRANI+R R
Sbjct: 214 KPMFGWFYTSGMTDASIRANIIRGR 238
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus
communis]
Length = 1686
Score = 167 bits (424), Expect = 2e-39
Identities = 78/142 (54%), Positives = 101/142 (71%), Gaps = 2/142 (1%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N L+ LLQRTCF CFHFR R +V+KC+ QLE I KGD++GAKR ++ S ++ + E+S+
Sbjct: 97 NFLHKLLQRTCFLCFHFRMQRGQVEKCIKQLELIVKGDIVGAKRLESVSPSEALYPEESD 156
Query: 250 GSHVSCGNVYHGAE-DQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIK 74
SH SC ++ G + + EH +Q W S QFTEAMSVLN FLKPKF KC C + NP I
Sbjct: 157 LSHESCPTIHSGVQCNDGEHTRQQGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNIT 216
Query: 73 KPTFGWFHMD-VSNAVIRANIM 11
KPTFGWFH +S+A IRAN++
Sbjct: 217 KPTFGWFHTSGMSDASIRANVI 238
>ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2
[Eucalyptus grandis]
Length = 1669
Score = 160 bits (406), Expect = 3e-37
Identities = 81/143 (56%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N LYNLL+RTCF+CFHFR SR +VD CV +LE IAKGDV GAK D+ + + E S
Sbjct: 93 NTLYNLLKRTCFFCFHFRESRSQVDACVSKLELIAKGDVAGAKELDSKWATNSSLREASN 152
Query: 250 GSHVSCGNVYHGAE-DQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIK 74
G VSC V + D H KQ W S QF EAMSVLN FLKP + +C C+AKNPKI
Sbjct: 153 GGDVSCSTVRSDLQHDSPVHQKQGEWTSLQFNEAMSVLNKFLKPTYKECKNCKAKNPKIS 212
Query: 73 KPTFGWFHMD-VSNAVIRANIMR 8
KPTFGWFHM ++ A R NI+R
Sbjct: 213 KPTFGWFHMSGMTGAQTRGNIIR 235
>ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
[Eucalyptus grandis]
Length = 1669
Score = 160 bits (406), Expect = 3e-37
Identities = 81/143 (56%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N LYNLL+RTCF+CFHFR SR +VD CV +LE IAKGDV GAK D+ + + E S
Sbjct: 93 NTLYNLLKRTCFFCFHFRESRSQVDACVSKLELIAKGDVAGAKELDSKWATNSSLREASN 152
Query: 250 GSHVSCGNVYHGAE-DQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIK 74
G VSC V + D H KQ W S QF EAMSVLN FLKP + +C C+AKNPKI
Sbjct: 153 GGDVSCSTVRSDLQHDSPVHQKQGEWTSLQFNEAMSVLNKFLKPTYKECKNCKAKNPKIS 212
Query: 73 KPTFGWFHMD-VSNAVIRANIMR 8
KPTFGWFHM ++ A R NI+R
Sbjct: 213 KPTFGWFHMSGMTGAQTRGNIIR 235
>gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus grandis]
Length = 1606
Score = 160 bits (406), Expect = 3e-37
Identities = 81/143 (56%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N LYNLL+RTCF+CFHFR SR +VD CV +LE IAKGDV GAK D+ + + E S
Sbjct: 40 NTLYNLLKRTCFFCFHFRESRSQVDACVSKLELIAKGDVAGAKELDSKWATNSSLREASN 99
Query: 250 GSHVSCGNVYHGAE-DQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIK 74
G VSC V + D H KQ W S QF EAMSVLN FLKP + +C C+AKNPKI
Sbjct: 100 GGDVSCSTVRSDLQHDSPVHQKQGEWTSLQFNEAMSVLNKFLKPTYKECKNCKAKNPKIS 159
Query: 73 KPTFGWFHMD-VSNAVIRANIMR 8
KPTFGWFHM ++ A R NI+R
Sbjct: 160 KPTFGWFHMSGMTGAQTRGNIIR 182
>ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Populus
euphratica]
Length = 1699
Score = 156 bits (395), Expect = 5e-36
Identities = 77/145 (53%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N L+ LLQRTCF+CFHFRA +V+K V QLE I KGDV+GAKR D+ S + EDS+
Sbjct: 92 NFLHKLLQRTCFFCFHFRADSNQVEKFVSQLELIIKGDVVGAKRLDSFSPIEASLPEDSD 151
Query: 250 GSHVSCGNVYHGA-EDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIK 74
GS SC ++ GA +E KQ W S Q +EAMS+LN FLK + KC C A NP I+
Sbjct: 152 GSSESCSTIHSGAPHPNNEQSKQSEWTSLQLSEAMSILNNFLKLESKKCKNCSASNPNIR 211
Query: 73 KPTFGWFH-MDVSNAVIRANIMRDR 2
KPTFGWFH +SNA IR+N+++ +
Sbjct: 212 KPTFGWFHWAGLSNAAIRSNLIKQQ 236
>ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Sesamum
indicum]
Length = 1701
Score = 151 bits (382), Expect = 2e-34
Identities = 78/154 (50%), Positives = 95/154 (61%), Gaps = 13/154 (8%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKR------------SDAA 287
N L NLL +TCFYCF FR SR EV+ CV QLE I KGD++GAKR D
Sbjct: 89 NTLNNLLNKTCFYCFQFRTSRREVENCVSQLELIVKGDIVGAKRLSMRQNLQDKKNMDWV 148
Query: 286 SSADLVNSEDSEGSHVSCGNVYHGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKC 107
S D+V+ EDS+GSH S + G ++ E Q WDS Q TEAMSVLN FLK K KC
Sbjct: 149 LSDDIVDPEDSQGSHTSHSSGISGDQNHYEQNSQACWDSSQLTEAMSVLNEFLKKKGRKC 208
Query: 106 SRCRAKNPKIKKPTFGWFHMD-VSNAVIRANIMR 8
C NPK+ KPTFGWFH+ +S+ +R+N +R
Sbjct: 209 KNCECNNPKLNKPTFGWFHVSGLSDTQLRSNAIR 242
>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
vinifera]
Length = 1691
Score = 151 bits (382), Expect = 2e-34
Identities = 74/144 (51%), Positives = 101/144 (70%), Gaps = 3/144 (2%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N+L+NLLQ+TCF+C HF+ S V K V QLE I+KGDV+GAK D+ S ++ EDS+
Sbjct: 94 NLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSD 153
Query: 250 GSHVSCGNVYHGA--EDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKI 77
GSHVSC + + + ++ S H+KQ W S Q EAMSV++ FLK K C C+AK+P++
Sbjct: 154 GSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQV 213
Query: 76 KKPTFGWFHM-DVSNAVIRANIMR 8
KPTFGWFHM +S+A RAN++R
Sbjct: 214 TKPTFGWFHMAGLSDAQTRANVIR 237
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 151 bits (382), Expect = 2e-34
Identities = 74/144 (51%), Positives = 101/144 (70%), Gaps = 3/144 (2%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N+L+NLLQ+TCF+C HF+ S V K V QLE I+KGDV+GAK D+ S ++ EDS+
Sbjct: 94 NLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSD 153
Query: 250 GSHVSCGNVYHGA--EDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKI 77
GSHVSC + + + ++ S H+KQ W S Q EAMSV++ FLK K C C+AK+P++
Sbjct: 154 GSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQV 213
Query: 76 KKPTFGWFHM-DVSNAVIRANIMR 8
KPTFGWFHM +S+A RAN++R
Sbjct: 214 TKPTFGWFHMAGLSDAQTRANVIR 237
>ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
raimondii] gi|763751831|gb|KJB19219.1| hypothetical
protein B456_003G089300 [Gossypium raimondii]
Length = 1674
Score = 146 bits (368), Expect = 7e-33
Identities = 72/142 (50%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N L+ L+QRTCF+C+HFRA R EV+KC+ QL+ I KGD++GAKR D+ S + E+SE
Sbjct: 94 NFLHTLIQRTCFFCYHFRAERTEVEKCISQLKLIGKGDIVGAKRLDSDSKDSSSHPENSE 153
Query: 250 GSHVSCGNVYHGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIKK 71
G G+ H +SE + W S Q TEAMSVLN FLK K+ +C C AKNP I K
Sbjct: 154 GCQ-KLGSRLH----ESEAVNPKEWTSLQLTEAMSVLNKFLKVKYKRCKNCDAKNPAITK 208
Query: 70 PTFGWFHMD-VSNAVIRANIMR 8
PTFGWFH +S + +R N++R
Sbjct: 209 PTFGWFHTSGMSGSQMRENVIR 230
>gb|KHG00372.1| DNA-directed RNA polymerase I subunit rpa[2] [Gossypium arboreum]
Length = 789
Score = 144 bits (363), Expect = 3e-32
Identities = 71/142 (50%), Positives = 93/142 (65%), Gaps = 1/142 (0%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N L+ L+QRTCF+C+HFRA R EV++C+ QL+ I KGD++GAKR D S + E+SE
Sbjct: 94 NFLHTLVQRTCFFCYHFRAERTEVERCISQLKLIGKGDIVGAKRLDTDSKDSSSHPENSE 153
Query: 250 GSHVSCGNVYHGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIKK 71
G G+ H +SE + W S Q TEAMSVLN FLK K+ +C C AKNP I K
Sbjct: 154 GCQ-KLGSRLH----ESEAVNPKEWTSLQLTEAMSVLNKFLKVKYKRCKNCDAKNPAITK 208
Query: 70 PTFGWFHMD-VSNAVIRANIMR 8
PTFGWFH +S + +R N++R
Sbjct: 209 PTFGWFHTSGMSGSQMRENVIR 230
>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 140 bits (352), Expect = 5e-31
Identities = 71/142 (50%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N L+ LLQR CF+C+HFRA + EV++CV QL+ I GD++GAKR D+ S+ S+ +E
Sbjct: 94 NFLHTLLQRICFFCYHFRAEKTEVERCVSQLKLIGNGDIVGAKRLDSDSADASSYSDYNE 153
Query: 250 GSHVSCGNVYHGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIKK 71
GS S G++ H SE +K W S Q EAMSVLN FLK K++KC C AKNP I K
Sbjct: 154 GSQES-GSIVH----NSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITK 208
Query: 70 PTFGWFHMD-VSNAVIRANIMR 8
P FGW HM+ + A +R N++R
Sbjct: 209 PVFGWLHMNGMLGAQMRENVIR 230
>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
putative isoform 1 [Theobroma cacao]
Length = 1665
Score = 140 bits (352), Expect = 5e-31
Identities = 71/142 (50%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N L+ LLQR CF+C+HFRA + EV++CV QL+ I GD++GAKR D+ S+ S+ +E
Sbjct: 94 NFLHTLLQRICFFCYHFRAEKTEVERCVSQLKLIGNGDIVGAKRLDSDSADASSYSDYNE 153
Query: 250 GSHVSCGNVYHGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKIKK 71
GS S G++ H SE +K W S Q EAMSVLN FLK K++KC C AKNP I K
Sbjct: 154 GSQES-GSIVH----NSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITK 208
Query: 70 PTFGWFHMD-VSNAVIRANIMR 8
P FGW HM+ + A +R N++R
Sbjct: 209 PVFGWLHMNGMLGAQMRENVIR 230
>gb|KDO57201.1| hypothetical protein CISIN_1g0468252mg, partial [Citrus sinensis]
Length = 358
Score = 137 bits (344), Expect = 4e-30
Identities = 72/144 (50%), Positives = 94/144 (65%), Gaps = 3/144 (2%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N+LY LL+R CF+C HF+ASR EV+KCV +LE I KGD+I AK D ++ N EDS+
Sbjct: 31 NLLYTLLKRICFFCHHFKASRREVEKCVRKLELIIKGDIIAAKSLDLDLPSESSNPEDSD 90
Query: 250 GSH-VSCGNVY-HGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKI 77
S+ SC V G D ++K W S QF EA L FLK + +KC C+AKNP+I
Sbjct: 91 VSNKSSCSMVTPRGNYDNVRNLKPQEWTSLQFAEAKLALLQFLKIETTKCGNCKAKNPRI 150
Query: 76 KKPTFGWFHMD-VSNAVIRANIMR 8
KPTFGW HM+ + +A IRAN++R
Sbjct: 151 SKPTFGWIHMNGMPHADIRANLIR 174
>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
sinensis]
Length = 1715
Score = 137 bits (344), Expect = 4e-30
Identities = 72/144 (50%), Positives = 94/144 (65%), Gaps = 3/144 (2%)
Frame = -3
Query: 430 NMLYNLLQRTCFYCFHFRASREEVDKCVFQLERIAKGDVIGAKRSDAASSADLVNSEDSE 251
N+LY LL+R CF+C HF+ASR EV+KCV +LE I KGD+I AK D ++ N EDS+
Sbjct: 94 NLLYTLLKRICFFCHHFKASRREVEKCVRKLELIIKGDIIAAKSLDLDLPSESSNPEDSD 153
Query: 250 GSH-VSCGNVY-HGAEDQSEHIKQPSWDSFQFTEAMSVLNMFLKPKFSKCSRCRAKNPKI 77
S+ SC V G D ++K W S QF EA L FLK + +KC C+AKNP+I
Sbjct: 154 VSNKSSCSMVTPRGNYDNVRNLKPQEWTSLQFAEAKLALLQFLKIETTKCGNCKAKNPRI 213
Query: 76 KKPTFGWFHMD-VSNAVIRANIMR 8
KPTFGW HM+ + +A IRAN++R
Sbjct: 214 SKPTFGWIHMNGMPHADIRANLIR 237