BLASTX nr result

ID: Gardenia21_contig00040501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00040501
         (478 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP20930.1| unnamed protein product [Coffea canephora]             40   8e-06

>emb|CDP20930.1| unnamed protein product [Coffea canephora]
          Length = 497

 Score = 40.0 bits (92), Expect(2) = 8e-06
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +3

Query: 246 YRGEPALKLS*KEMEMIAEPFKNSLVGRFPFSRPSMEIILKF 371
           Y+GE A+  S  + + +A PF+ +LVG+F   RPS+E I KF
Sbjct: 41  YKGEAAVVFSKADADKLAAPFQWALVGKFSHGRPSLEDIRKF 82



 Score = 36.2 bits (82), Expect(2) = 8e-06
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +2

Query: 356 DYSQILTSLGLKDNCLIGLLDDRHVLICPTLQEDHTRLFIR 478
           D  +   SL LKD+  IGL+D RHVLI    + D  R+++R
Sbjct: 78  DIRKFFASLNLKDHVSIGLMDYRHVLIKCMAEADFNRIWMR 118


Top