BLASTX nr result
ID: Gardenia21_contig00039174
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00039174
(358 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 177 3e-42
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 176 5e-42
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 176 5e-42
gb|AKM12471.1| reverse transcriptase, partial [Coffea costatifru... 176 6e-42
gb|AKM12470.1| reverse transcriptase, partial [Coffea costatifru... 176 6e-42
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 176 6e-42
gb|AKM12489.1| reverse transcriptase, partial [Polysphaeria parv... 175 1e-41
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 175 1e-41
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 175 1e-41
gb|AKM12474.1| reverse transcriptase, partial [Coffea eugenioides] 175 1e-41
gb|AKM12472.1| reverse transcriptase, partial [Coffea eugenioides] 174 2e-41
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 174 2e-41
gb|AKM12480.1| reverse transcriptase, partial [Coptosperma sp. C... 174 2e-41
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 174 2e-41
gb|AKM12475.1| reverse transcriptase, partial [Coffea humilis] 174 3e-41
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 174 3e-41
gb|AKM12491.1| reverse transcriptase, partial [Coffea ebracteolata] 173 4e-41
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 173 4e-41
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 173 4e-41
gb|AKM12481.1| reverse transcriptase, partial [Ixora coccinea] 173 5e-41
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 177 bits (449), Expect = 3e-42
Identities = 85/114 (74%), Positives = 98/114 (85%)
Frame = +1
Query: 16 ARYKAQLVAKGYSQVQSVDFNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGE 195
ARYKA+LVAKGYSQ+ S+DFND+FSP+VKHSSIR LL++VAM+D EL+Q DVKT FLHGE
Sbjct: 620 ARYKARLVAKGYSQIPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 679
Query: 196 LEEQIYMKQPQGFEIEGKENYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
LEE IYM+QP+GF + GKEN VC LKKSLYGLKQSPR YKRFDSFML + R
Sbjct: 680 LEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRR 733
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 176 bits (447), Expect = 5e-42
Identities = 86/114 (75%), Positives = 97/114 (85%)
Frame = +1
Query: 16 ARYKAQLVAKGYSQVQSVDFNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGE 195
ARYKA+LVAKGYSQ+ +DFNDIFSPVVKHSSIR LL++VAM+D EL+Q DVKT FLHGE
Sbjct: 636 ARYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 695
Query: 196 LEEQIYMKQPQGFEIEGKENYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
LEE IYM+QP+GF + GKEN VC LKKSLYGLKQSPR YKRFDSFML + R
Sbjct: 696 LEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRR 749
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 176 bits (447), Expect = 5e-42
Identities = 86/114 (75%), Positives = 97/114 (85%)
Frame = +1
Query: 16 ARYKAQLVAKGYSQVQSVDFNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGE 195
ARYKA+LVAKGYSQ+ +DFNDIFSPVVKHSSIR LL++VAM+D EL+Q DVKT FLHGE
Sbjct: 804 ARYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 863
Query: 196 LEEQIYMKQPQGFEIEGKENYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
LEE IYM+QP+GF + GKEN VC LKKSLYGLKQSPR YKRFDSFML + R
Sbjct: 864 LEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRR 917
>gb|AKM12471.1| reverse transcriptase, partial [Coffea costatifructa]
Length = 127
Score = 176 bits (446), Expect = 6e-42
Identities = 86/95 (90%), Positives = 90/95 (94%)
Frame = +1
Query: 73 FNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGELEEQIYMKQPQGFEIEGKE 252
FND+FSPVVKHSSIRVLLALVAMYDLEL+Q DVKT FLHGELEEQIYM+QPQGFEIEGKE
Sbjct: 1 FNDVFSPVVKHSSIRVLLALVAMYDLELEQLDVKTAFLHGELEEQIYMRQPQGFEIEGKE 60
Query: 253 NYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
+VCLLKKSLYGLKQSPR YKRFDSFMLGHGYSR
Sbjct: 61 GHVCLLKKSLYGLKQSPRQWYKRFDSFMLGHGYSR 95
>gb|AKM12470.1| reverse transcriptase, partial [Coffea costatifructa]
Length = 127
Score = 176 bits (446), Expect = 6e-42
Identities = 86/95 (90%), Positives = 90/95 (94%)
Frame = +1
Query: 73 FNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGELEEQIYMKQPQGFEIEGKE 252
FND+FSPVVKHSSIRVLLALVAMYDLEL+Q DVKT FLHGELEEQIYM+QPQGFEIEGKE
Sbjct: 1 FNDVFSPVVKHSSIRVLLALVAMYDLELEQLDVKTAFLHGELEEQIYMRQPQGFEIEGKE 60
Query: 253 NYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
+VCLLKKSLYGLKQSPR YKRFDSFMLGHGYSR
Sbjct: 61 GHVCLLKKSLYGLKQSPRQWYKRFDSFMLGHGYSR 95
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 176 bits (446), Expect = 6e-42
Identities = 85/114 (74%), Positives = 97/114 (85%)
Frame = +1
Query: 16 ARYKAQLVAKGYSQVQSVDFNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGE 195
ARYKA+LVAKGYSQ+ +DFND+FSPVVKHSSIR LL++VAM+D EL+Q DVKT FLHGE
Sbjct: 787 ARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 846
Query: 196 LEEQIYMKQPQGFEIEGKENYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
LEE IYM+QP+GF + GKEN VC LKKSLYGLKQSPR YKRFDSFML + R
Sbjct: 847 LEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRR 900
>gb|AKM12489.1| reverse transcriptase, partial [Polysphaeria parvifolia]
Length = 127
Score = 175 bits (444), Expect = 1e-41
Identities = 86/95 (90%), Positives = 90/95 (94%)
Frame = +1
Query: 73 FNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGELEEQIYMKQPQGFEIEGKE 252
FND+FSPVVKHSSIRVLLALVAMYDLEL+Q DVKT FLHGELEEQIYMKQPQGFEIEGKE
Sbjct: 1 FNDVFSPVVKHSSIRVLLALVAMYDLELEQLDVKTAFLHGELEEQIYMKQPQGFEIEGKE 60
Query: 253 NYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
++VCLLKKSLYGLKQSPR YKRFDSFMLGH YSR
Sbjct: 61 DHVCLLKKSLYGLKQSPRQWYKRFDSFMLGHNYSR 95
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 175 bits (444), Expect = 1e-41
Identities = 82/113 (72%), Positives = 98/113 (86%)
Frame = +1
Query: 19 RYKAQLVAKGYSQVQSVDFNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGEL 198
R+KA+LVAKG+SQ+ VD+ND+FSPVVKHSSIR ++VAM+DLEL+Q DVKT FLHGEL
Sbjct: 869 RFKARLVAKGFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGEL 928
Query: 199 EEQIYMKQPQGFEIEGKENYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
EE+IYM QP+GF + GKE+YVC LK+SLYGLKQSPR YKRFDSFML HG+ R
Sbjct: 929 EEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKR 981
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 175 bits (444), Expect = 1e-41
Identities = 84/114 (73%), Positives = 97/114 (85%)
Frame = +1
Query: 16 ARYKAQLVAKGYSQVQSVDFNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGE 195
ARYKA+L+AKGYSQ+ +DFND+FSPVVKHSSIR LL++VAM+D EL+Q DVKT FLHGE
Sbjct: 1085 ARYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 1144
Query: 196 LEEQIYMKQPQGFEIEGKENYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
LEE IYM+QP+GF + GKEN VC LKKSLYGLKQSPR YKRFDSFML + R
Sbjct: 1145 LEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRR 1198
>gb|AKM12474.1| reverse transcriptase, partial [Coffea eugenioides]
Length = 127
Score = 175 bits (443), Expect = 1e-41
Identities = 85/95 (89%), Positives = 90/95 (94%)
Frame = +1
Query: 73 FNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGELEEQIYMKQPQGFEIEGKE 252
FND+FSPVVKHSSIRVLLALVAMYDLEL+Q DVKT FLHGELEEQIYMKQPQGFEIEGKE
Sbjct: 1 FNDVFSPVVKHSSIRVLLALVAMYDLELEQLDVKTAFLHGELEEQIYMKQPQGFEIEGKE 60
Query: 253 NYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
+++CLLKKSLYGLKQSPR YKRFDSFMLGHGY R
Sbjct: 61 DHICLLKKSLYGLKQSPRQWYKRFDSFMLGHGYLR 95
>gb|AKM12472.1| reverse transcriptase, partial [Coffea eugenioides]
Length = 127
Score = 174 bits (442), Expect = 2e-41
Identities = 86/95 (90%), Positives = 90/95 (94%)
Frame = +1
Query: 73 FNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGELEEQIYMKQPQGFEIEGKE 252
FNDIFSPVVKHSSIRVLLALVAMYDLEL+Q DVKT FLHGELEEQIYM+QPQGFEIEGKE
Sbjct: 1 FNDIFSPVVKHSSIRVLLALVAMYDLELEQLDVKTAFLHGELEEQIYMRQPQGFEIEGKE 60
Query: 253 NYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
++VCLLKKSLYGLKQSPR YKRFDSFMLGHGY R
Sbjct: 61 DHVCLLKKSLYGLKQSPRQWYKRFDSFMLGHGYLR 95
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 174 bits (442), Expect = 2e-41
Identities = 81/113 (71%), Positives = 97/113 (85%)
Frame = +1
Query: 19 RYKAQLVAKGYSQVQSVDFNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGEL 198
R+K +LVAKG+SQ+ VD+ND+FSPVVKHSSIR ++V M+DLEL+Q DVKTTFLHGEL
Sbjct: 869 RFKVRLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGEL 928
Query: 199 EEQIYMKQPQGFEIEGKENYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
EE+IYM QP+GF + GKE+YVC LK+SLYGLKQSPR YKRFDSFML HG+ R
Sbjct: 929 EEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKR 981
>gb|AKM12480.1| reverse transcriptase, partial [Coptosperma sp. CMAC-2015]
Length = 127
Score = 174 bits (441), Expect = 2e-41
Identities = 85/95 (89%), Positives = 91/95 (95%)
Frame = +1
Query: 73 FNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGELEEQIYMKQPQGFEIEGKE 252
FNDIFSPVVKHSSIRVLLALVAMYDLEL+Q DV+T FLHGELEEQIYMKQPQGFEIEGK+
Sbjct: 1 FNDIFSPVVKHSSIRVLLALVAMYDLELEQLDVRTAFLHGELEEQIYMKQPQGFEIEGKK 60
Query: 253 NYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
++VCLLKKSLYGLKQSPR YKRFD+FMLGHGYSR
Sbjct: 61 DHVCLLKKSLYGLKQSPRQWYKRFDTFMLGHGYSR 95
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 174 bits (441), Expect = 2e-41
Identities = 82/111 (73%), Positives = 97/111 (87%)
Frame = +1
Query: 19 RYKAQLVAKGYSQVQSVDFNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGEL 198
R+KA+LVAKG+SQ+ VD+ND+FSPVVKHSSIR ++VAM DLELKQ DVKTTFLHGEL
Sbjct: 202 RFKARLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMDDLELKQLDVKTTFLHGEL 261
Query: 199 EEQIYMKQPQGFEIEGKENYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGY 351
E++IYM QP+GF + GKE+YVC LK+SLYGLKQSPR YKRFDSFML HG+
Sbjct: 262 EDEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGF 312
>gb|AKM12475.1| reverse transcriptase, partial [Coffea humilis]
Length = 127
Score = 174 bits (440), Expect = 3e-41
Identities = 86/95 (90%), Positives = 90/95 (94%)
Frame = +1
Query: 73 FNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGELEEQIYMKQPQGFEIEGKE 252
FNDIFSPVVKHSSIRVLLALVAMY+LEL+Q DVKTTFLHGELEEQIYMKQPQGFEIEGKE
Sbjct: 1 FNDIFSPVVKHSSIRVLLALVAMYNLELEQLDVKTTFLHGELEEQIYMKQPQGFEIEGKE 60
Query: 253 NYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
++VCLL KSLYGLKQSPR YKRFDSFMLGHGY R
Sbjct: 61 DHVCLLNKSLYGLKQSPRQWYKRFDSFMLGHGYLR 95
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 174 bits (440), Expect = 3e-41
Identities = 84/114 (73%), Positives = 96/114 (84%)
Frame = +1
Query: 16 ARYKAQLVAKGYSQVQSVDFNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGE 195
A YKA+LVAKGYSQ+ +DFND+FSPVVKHSSIR LL++VAM+D EL+Q DVKT FLHGE
Sbjct: 264 AMYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 323
Query: 196 LEEQIYMKQPQGFEIEGKENYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
LEE IYM+QP+GF + GKEN VC LKKSLYGLKQSPR YKRFDSFML + R
Sbjct: 324 LEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRR 377
>gb|AKM12491.1| reverse transcriptase, partial [Coffea ebracteolata]
Length = 127
Score = 173 bits (439), Expect = 4e-41
Identities = 85/95 (89%), Positives = 90/95 (94%)
Frame = +1
Query: 73 FNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGELEEQIYMKQPQGFEIEGKE 252
FND+ SPVVKHSSIRVLLALVAMYDLEL+Q DVKT FLHGELEEQIYM+QPQGFEIEGKE
Sbjct: 1 FNDVSSPVVKHSSIRVLLALVAMYDLELEQLDVKTAFLHGELEEQIYMRQPQGFEIEGKE 60
Query: 253 NYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
++VCLLKKSLYGLKQSPR YKRFDSFMLGHGYSR
Sbjct: 61 DHVCLLKKSLYGLKQSPRQWYKRFDSFMLGHGYSR 95
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 173 bits (439), Expect = 4e-41
Identities = 83/114 (72%), Positives = 96/114 (84%)
Frame = +1
Query: 16 ARYKAQLVAKGYSQVQSVDFNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGE 195
ARYKA+LVAKGYSQ+ +DFND+FSP++KHSSIR LL +VAM+D EL+Q DVKT FLHGE
Sbjct: 913 ARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGE 972
Query: 196 LEEQIYMKQPQGFEIEGKENYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
LEE IYM+QP+GF + GKEN VC LKKSLYGLKQSPR YKRFDSFML + R
Sbjct: 973 LEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRR 1026
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 173 bits (439), Expect = 4e-41
Identities = 83/114 (72%), Positives = 96/114 (84%)
Frame = +1
Query: 16 ARYKAQLVAKGYSQVQSVDFNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGE 195
ARYKA+LVAKGYSQ+ +DFND+FSP++KHSSIR LL +VAM+D EL+Q DVKT FLHGE
Sbjct: 913 ARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGE 972
Query: 196 LEEQIYMKQPQGFEIEGKENYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
LEE IYM+QP+GF + GKEN VC LKKSLYGLKQSPR YKRFDSFML + R
Sbjct: 973 LEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRR 1026
>gb|AKM12481.1| reverse transcriptase, partial [Ixora coccinea]
Length = 127
Score = 173 bits (438), Expect = 5e-41
Identities = 84/95 (88%), Positives = 90/95 (94%)
Frame = +1
Query: 73 FNDIFSPVVKHSSIRVLLALVAMYDLELKQFDVKTTFLHGELEEQIYMKQPQGFEIEGKE 252
FND+FSPVVKHSSIRVLLALVAMYDLEL+Q DVKT FLHGELEEQIYM+QP GFEIEGKE
Sbjct: 1 FNDVFSPVVKHSSIRVLLALVAMYDLELEQLDVKTAFLHGELEEQIYMEQPHGFEIEGKE 60
Query: 253 NYVCLLKKSLYGLKQSPR**YKRFDSFMLGHGYSR 357
++VCLLKKSLYGLKQSPR YKRFDSFMLGHGY+R
Sbjct: 61 DHVCLLKKSLYGLKQSPRQWYKRFDSFMLGHGYTR 95