BLASTX nr result

ID: Gardenia21_contig00038441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00038441
         (288 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP05983.1| unnamed protein product [Coffea canephora]            173   5e-41
ref|XP_006356259.1| PREDICTED: putative F-box/LRR-repeat protein...    60   8e-07

>emb|CDP05983.1| unnamed protein product [Coffea canephora]
          Length = 527

 Score =  173 bits (438), Expect = 5e-41
 Identities = 82/95 (86%), Positives = 89/95 (93%)
 Frame = -3

Query: 286 LFHLLIMSCPELEFLSVDYCFGLDRLQIFGLLKLKEIRTRNCLENFHKIEIQAPKLEYLS 107
           +F LLIMSCPELEFLSVDYCFGLDRL+IFGLLKLKEIR RNCL+NF KI+IQAP LE L+
Sbjct: 196 VFQLLIMSCPELEFLSVDYCFGLDRLEIFGLLKLKEIRMRNCLQNFDKIQIQAPNLECLN 255

Query: 106 HHGLGTLSLVDVNSCKSLKVLVLYSLTCNNRWAED 2
           HHGLGTLSLVDVNSCKSLKVLVLYSLTC+N+W ED
Sbjct: 256 HHGLGTLSLVDVNSCKSLKVLVLYSLTCDNKWVED 290


>ref|XP_006356259.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like
           [Solanum tuberosum]
          Length = 521

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
 Frame = -3

Query: 286 LFHLLIMSCPELEFLSVDYCFGLDRLQIFGLL-KLKEIRTRNCLENFHKIEIQAPKLE-- 116
           L   +   C +LE LS+    GL  LQ+ G L KL+ ++ + C   F K++I AP L+  
Sbjct: 164 LLQAIYAICSDLEVLSLKRFHGLISLQVAGTLPKLRTVKLKFCPPKFKKVDIVAPNLKDL 223

Query: 115 YLSHHGLGTLSLVDVNSCKSLKVLVLYSLTCNNRWAE 5
           Y+S   L  L ++++ +CKSLK L L ++  N++W E
Sbjct: 224 YISSFNLD-LRVIEITACKSLKCLKLTAVAVNDKWLE 259


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