BLASTX nr result

ID: Gardenia21_contig00037959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00037959
         (376 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006283967.1| hypothetical protein CARUB_v10005090mg [Caps...    56   9e-06

>ref|XP_006283967.1| hypothetical protein CARUB_v10005090mg [Capsella rubella]
           gi|482552672|gb|EOA16865.1| hypothetical protein
           CARUB_v10005090mg [Capsella rubella]
          Length = 368

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 34/109 (31%), Positives = 50/109 (45%)
 Frame = +2

Query: 47  QWKNLKDMKPKEMKSKIEQQRRSVYINRDCQXXXXXXXXXXXXXXPRNTXXXXXXXXXXX 226
           QW+ LK++K +E+K K +QQR+S+Y+ R+                PR +           
Sbjct: 219 QWEKLKEVKLREVKLKADQQRKSMYLKRELNRLGTKENNKVRVFSPRASEKCRVKAIEDL 278

Query: 227 XXXXXXXXXXXXXXXXXGDTTVFDSYAVVKNSYNPQNDFRESMIETIIE 373
                               T  +S+AVVK S +PQ DFR+SMIE I+E
Sbjct: 279 KKAKLRAREQELLIETTDGGTENESFAVVKCSSDPQKDFRDSMIEMIME 327


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