BLASTX nr result

ID: Gardenia21_contig00037272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00037272
         (304 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010906663.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
emb|CDP09324.1| unnamed protein product [Coffea canephora]             64   3e-08
ref|XP_010242076.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
ref|XP_009397744.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
ref|XP_006354595.1| PREDICTED: pentatricopeptide repeat-containi...    63   1e-07
ref|XP_010323176.1| PREDICTED: pentatricopeptide repeat-containi...    63   1e-07
ref|XP_010228458.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_008781031.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
emb|CBI33742.3| unnamed protein product [Vitis vinifera]               62   2e-07
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea m...    62   2e-07
ref|NP_001183145.1| uncharacterized protein LOC100501514 [Zea ma...    62   2e-07
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]    62   2e-07
ref|XP_006282456.1| hypothetical protein CARUB_v10004360mg [Caps...    62   2e-07
ref|XP_013706379.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_010526710.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_009782695.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_009781847.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_009101737.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    61   3e-07
emb|CDY22310.1| BnaA06g36320D [Brassica napus]                         61   3e-07

>ref|XP_010906663.1| PREDICTED: pentatricopeptide repeat-containing protein ELI1,
           chloroplastic [Elaeis guineensis]
          Length = 639

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKIIVRDRNRFHHFVDGSCSCGDYW
Sbjct: 614 GRKIIVRDRNRFHHFVDGSCSCGDYW 639


>emb|CDP09324.1| unnamed protein product [Coffea canephora]
          Length = 627

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKIIVRDRNRFHHFVDGSCSCGDYW
Sbjct: 602 GRKIIVRDRNRFHHFVDGSCSCGDYW 627


>ref|XP_010242076.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic [Nelumbo nucifera]
          Length = 632

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI+VRDRNRFHHFVDGSCSCGDYW
Sbjct: 607 GRKIVVRDRNRFHHFVDGSCSCGDYW 632


>ref|XP_009397744.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 632

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI+VRDRNRFHHFVDGSCSCGDYW
Sbjct: 607 GRKIVVRDRNRFHHFVDGSCSCGDYW 632


>ref|XP_006354595.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565376192|ref|XP_006354596.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X2 [Solanum tuberosum]
           gi|565376194|ref|XP_006354597.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X3 [Solanum tuberosum]
           gi|565376199|ref|XP_006354598.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X4 [Solanum tuberosum]
           gi|565376201|ref|XP_006354599.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X5 [Solanum tuberosum]
           gi|565376203|ref|XP_006354600.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like isoform X6 [Solanum tuberosum]
          Length = 624

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKIIVRDRNRFHHFVDGSCSCGD+W
Sbjct: 599 GRKIIVRDRNRFHHFVDGSCSCGDFW 624


>ref|XP_010323176.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic [Solanum lycopersicum]
          Length = 624

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKIIVRDRNRFHHFVDGSCSCGD+W
Sbjct: 599 GRKIIVRDRNRFHHFVDGSCSCGDFW 624


>ref|XP_010228458.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic [Brachypodium distachyon]
           gi|944085815|gb|KQK21167.1| hypothetical protein
           BRADI_1g59070 [Brachypodium distachyon]
          Length = 633

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI+ RDRNRFHHFVDGSCSCGDYW
Sbjct: 608 GRKIVFRDRNRFHHFVDGSCSCGDYW 633


>ref|XP_008781031.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic, partial [Phoenix dactylifera]
          Length = 605

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKIIVRDRNRFHHFVDG CSCGDYW
Sbjct: 580 GRKIIVRDRNRFHHFVDGLCSCGDYW 605


>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI+VRDRNRFHHFV+GSCSCGDYW
Sbjct: 537 GRKIVVRDRNRFHHFVNGSCSCGDYW 562


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein ELI1,
           chloroplastic [Vitis vinifera]
          Length = 628

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI+VRDRNRFHHFV+GSCSCGDYW
Sbjct: 603 GRKIVVRDRNRFHHFVNGSCSCGDYW 628


>gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
          Length = 633

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI+ RDRNRFHHFVDGSCSCGDYW
Sbjct: 608 GRKIVFRDRNRFHHFVDGSCSCGDYW 633


>ref|NP_001183145.1| uncharacterized protein LOC100501514 [Zea mays]
           gi|238009628|gb|ACR35849.1| unknown [Zea mays]
          Length = 332

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI+ RDRNRFHHFVDGSCSCGDYW
Sbjct: 307 GRKIVFRDRNRFHHFVDGSCSCGDYW 332


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI+VRDRNRFHHFV+GSCSCGDYW
Sbjct: 550 GRKIVVRDRNRFHHFVNGSCSCGDYW 575


>ref|XP_006282456.1| hypothetical protein CARUB_v10004360mg [Capsella rubella]
           gi|482551161|gb|EOA15354.1| hypothetical protein
           CARUB_v10004360mg [Capsella rubella]
          Length = 633

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKII+RDRNRFHHFVDGSCSCGD+W
Sbjct: 608 GRKIIMRDRNRFHHFVDGSCSCGDFW 633


>ref|XP_013706379.1| PREDICTED: pentatricopeptide repeat-containing protein ELI1,
           chloroplastic isoform X2 [Brassica napus]
          Length = 637

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI++RDRNRFHHFVDGSCSCGD+W
Sbjct: 612 GRKIVMRDRNRFHHFVDGSCSCGDFW 637


>ref|XP_010526710.1| PREDICTED: pentatricopeptide repeat-containing protein ELI1,
           chloroplastic [Tarenaya hassleriana]
          Length = 635

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI++RDRNRFHHFVDGSCSCGD+W
Sbjct: 610 GRKIVMRDRNRFHHFVDGSCSCGDFW 635


>ref|XP_009782695.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic [Nicotiana sylvestris]
          Length = 627

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKIIVRDRNRFHHFV+GSCSCGD+W
Sbjct: 602 GRKIIVRDRNRFHHFVEGSCSCGDFW 627


>ref|XP_009781847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Nicotiana sylvestris]
           gi|698461758|ref|XP_009781848.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Nicotiana sylvestris]
          Length = 292

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKIIVRDRNRFHHFV+GSCSCGD+W
Sbjct: 205 GRKIIVRDRNRFHHFVEGSCSCGDFW 230


>ref|XP_009101737.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g37380, chloroplastic [Brassica rapa]
          Length = 637

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI++RDRNRFHHFVDGSCSCGD+W
Sbjct: 612 GRKIVMRDRNRFHHFVDGSCSCGDFW 637


>emb|CDY22310.1| BnaA06g36320D [Brassica napus]
          Length = 560

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -3

Query: 302 GRKIIVRDRNRFHHFVDGSCSCGDYW 225
           GRKI++RDRNRFHHFVDGSCSCGD+W
Sbjct: 535 GRKIVMRDRNRFHHFVDGSCSCGDFW 560


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