BLASTX nr result

ID: Gardenia21_contig00035786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00035786
         (362 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP07275.1| unnamed protein product [Coffea canephora]             69   2e-09
emb|CDP02235.1| unnamed protein product [Coffea canephora]             64   4e-08
emb|CDO97430.1| unnamed protein product [Coffea canephora]             52   8e-06

>emb|CDP07275.1| unnamed protein product [Coffea canephora]
          Length = 563

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/82 (43%), Positives = 43/82 (52%)
 Frame = -1

Query: 248 C*GPDVMGVVIHAFPPRDVYSGGDFRHGRDYVIVDQGYFLSLNFFLLGVXXXXXXXXXXX 69
           C   DVMG+V+HAFP RDVY  G  RHGRDYVIVD                         
Sbjct: 74  CLTADVMGIVVHAFPARDVYMEGTMRHGRDYVIVDH------------------------ 109

Query: 68  XXXXCSKRPVILTLWGDFEAVE 3
                SKRP++LTLW DFE+++
Sbjct: 110 -----SKRPILLTLWKDFESIK 126


>emb|CDP02235.1| unnamed protein product [Coffea canephora]
          Length = 331

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 34/78 (43%), Positives = 40/78 (51%)
 Frame = -1

Query: 236 DVMGVVIHAFPPRDVYSGGDFRHGRDYVIVDQGYFLSLNFFLLGVXXXXXXXXXXXXXXX 57
           DVMG+V+HAFP RDVY  G  RHGRDYVIVD                             
Sbjct: 66  DVMGIVVHAFPARDVYMEGTMRHGRDYVIVDH---------------------------- 97

Query: 56  CSKRPVILTLWGDFEAVE 3
             K P++LTLW DFE++E
Sbjct: 98  -IKCPILLTLWKDFESIE 114


>emb|CDO97430.1| unnamed protein product [Coffea canephora]
          Length = 179

 Score = 52.4 bits (124), Expect(2) = 8e-06
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = -1

Query: 236 DVMGVVIHAFPPRDVYSGGDFRHGRDYVIVDQGYFLS 126
           +VMGVVIHA PPRDVY  G  R+GRD++IVDQ    S
Sbjct: 142 NVMGVVIHALPPRDVYFEGSRRYGRDHIIVDQWLIFS 178



 Score = 23.9 bits (50), Expect(2) = 8e-06
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 357 FHFVAETDTFISV 319
           FHFVA+T+ FI+V
Sbjct: 131 FHFVADTNIFINV 143


Top