BLASTX nr result

ID: Gardenia21_contig00035585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00035585
         (341 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP04305.1| unnamed protein product [Coffea canephora]            137   3e-30
ref|XP_012073757.1| PREDICTED: RNA-binding protein 24 isoform X3...   123   5e-26
ref|XP_012073748.1| PREDICTED: RNA-binding protein 24 isoform X2...   123   5e-26
ref|XP_012073739.1| PREDICTED: RNA-binding protein 24-B isoform ...   123   5e-26
ref|XP_002312040.1| RNA recognition motif-containing family prot...   123   6e-26
ref|XP_010658454.1| PREDICTED: RNA-binding protein 38 isoform X2...   121   2e-25
emb|CBI31519.3| unnamed protein product [Vitis vinifera]              121   2e-25
ref|XP_002278641.2| PREDICTED: RNA-binding protein 38 isoform X1...   121   2e-25
ref|XP_002523906.1| RNA-binding region-containing protein, putat...   120   3e-25
ref|XP_010108447.1| RNA-binding protein 38 [Morus notabilis] gi|...   119   9e-25
ref|XP_011027014.1| PREDICTED: RNA-binding protein 24-like isofo...   116   6e-24
ref|XP_011027013.1| PREDICTED: RNA-binding protein 24-like isofo...   116   6e-24
ref|XP_002315274.1| RNA recognition motif-containing family prot...   115   1e-23
ref|XP_011032750.1| PREDICTED: RNA-binding protein 24-like isofo...   115   2e-23
ref|XP_011031987.1| PREDICTED: RNA-binding protein 24-like isofo...   115   2e-23
ref|XP_009780038.1| PREDICTED: RNA-binding protein 24-B-like iso...   114   3e-23
ref|XP_009780037.1| PREDICTED: RNA-binding protein 24-B-like iso...   114   3e-23
ref|XP_012456848.1| PREDICTED: RNA-binding protein 24-like isofo...   113   6e-23
ref|XP_012456846.1| PREDICTED: RNA-binding protein 24-like isofo...   113   6e-23
ref|XP_012456847.1| PREDICTED: RNA-binding protein 24-like isofo...   113   6e-23

>emb|CDP04305.1| unnamed protein product [Coffea canephora]
          Length = 223

 Score =  137 bits (345), Expect = 3e-30
 Identities = 68/109 (62%), Positives = 71/109 (65%)
 Frame = -1

Query: 329 LGVGPRGXXXXXXXXXNHVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTY 150
           L VGPRG         NH+PWYYPGG                        VP YGYSPTY
Sbjct: 81  LQVGPRGGNTAAAGPANHLPWYYPGGAPPPAAAAPFHHHHQA--------VPIYGYSPTY 132

Query: 149 IATDMSYNHKLSYTGGSYMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           IATDMSY+HKLSYTGGSYMNGHFSQVYP QPMVG NALMP+YPLY FHQ
Sbjct: 133 IATDMSYSHKLSYTGGSYMNGHFSQVYPGQPMVGTNALMPMYPLYHFHQ 181


>ref|XP_012073757.1| PREDICTED: RNA-binding protein 24 isoform X3 [Jatropha curcas]
          Length = 246

 Score =  123 bits (309), Expect = 5e-26
 Identities = 60/107 (56%), Positives = 68/107 (63%)
 Frame = -1

Query: 323 VGPRGXXXXXXXXXNHVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIA 144
           VGPR           HV WYYP G                        VP+YGY+PTY+A
Sbjct: 112 VGPRSTSSAPVN---HVQWYYPAGSPAAPFHHQHHQA-----------VPYYGYTPTYVA 157

Query: 143 TDMSYNHKLSYTGGSYMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           TD+SYNHKLSYTGGSYMNGHFSQVYP QP++GANA+MP+YPLY FHQ
Sbjct: 158 TDVSYNHKLSYTGGSYMNGHFSQVYPGQPIMGANAVMPMYPLYHFHQ 204


>ref|XP_012073748.1| PREDICTED: RNA-binding protein 24 isoform X2 [Jatropha curcas]
          Length = 250

 Score =  123 bits (309), Expect = 5e-26
 Identities = 60/107 (56%), Positives = 68/107 (63%)
 Frame = -1

Query: 323 VGPRGXXXXXXXXXNHVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIA 144
           VGPR           HV WYYP G                        VP+YGY+PTY+A
Sbjct: 112 VGPRSTSSAPVN---HVQWYYPAGSPAAPFHHQHHQA-----------VPYYGYTPTYVA 157

Query: 143 TDMSYNHKLSYTGGSYMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           TD+SYNHKLSYTGGSYMNGHFSQVYP QP++GANA+MP+YPLY FHQ
Sbjct: 158 TDVSYNHKLSYTGGSYMNGHFSQVYPGQPIMGANAVMPMYPLYHFHQ 204


>ref|XP_012073739.1| PREDICTED: RNA-binding protein 24-B isoform X1 [Jatropha curcas]
           gi|643740556|gb|KDP46154.1| hypothetical protein
           JCGZ_06665 [Jatropha curcas]
          Length = 253

 Score =  123 bits (309), Expect = 5e-26
 Identities = 60/107 (56%), Positives = 68/107 (63%)
 Frame = -1

Query: 323 VGPRGXXXXXXXXXNHVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIA 144
           VGPR           HV WYYP G                        VP+YGY+PTY+A
Sbjct: 112 VGPRSTSSAPVN---HVQWYYPAGSPAAPFHHQHHQA-----------VPYYGYTPTYVA 157

Query: 143 TDMSYNHKLSYTGGSYMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           TD+SYNHKLSYTGGSYMNGHFSQVYP QP++GANA+MP+YPLY FHQ
Sbjct: 158 TDVSYNHKLSYTGGSYMNGHFSQVYPGQPIMGANAVMPMYPLYHFHQ 204


>ref|XP_002312040.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222851860|gb|EEE89407.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 251

 Score =  123 bits (308), Expect = 6e-26
 Identities = 59/92 (64%), Positives = 61/92 (66%)
 Frame = -1

Query: 278 HVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIATDMSYNHKLSYTGGS 99
           HV WYYP G                        VPFYGYSP YIATD+SYNHKLSYTGGS
Sbjct: 126 HVQWYYPAGSAAASPFHHQHHQA----------VPFYGYSPAYIATDISYNHKLSYTGGS 175

Query: 98  YMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           YMNGHFSQVYP Q MVGAN LMP+YPLY FHQ
Sbjct: 176 YMNGHFSQVYPGQAMVGANTLMPMYPLYHFHQ 207


>ref|XP_010658454.1| PREDICTED: RNA-binding protein 38 isoform X2 [Vitis vinifera]
          Length = 247

 Score =  121 bits (303), Expect = 2e-25
 Identities = 58/92 (63%), Positives = 60/92 (65%)
 Frame = -1

Query: 278 HVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIATDMSYNHKLSYTGGS 99
           HV WYYP G                        VPFYGYSP YIA D+SYNHKLSYTGGS
Sbjct: 125 HVQWYYPAGTPAPPFHHQHHQA-----------VPFYGYSPAYIAADISYNHKLSYTGGS 173

Query: 98  YMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           YMNGHFSQVYP Q MVGANALMP+YP Y FHQ
Sbjct: 174 YMNGHFSQVYPGQAMVGANALMPMYPFYHFHQ 205


>emb|CBI31519.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score =  121 bits (303), Expect = 2e-25
 Identities = 58/92 (63%), Positives = 60/92 (65%)
 Frame = -1

Query: 278 HVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIATDMSYNHKLSYTGGS 99
           HV WYYP G                        VPFYGYSP YIA D+SYNHKLSYTGGS
Sbjct: 94  HVQWYYPAGTPAPPFHHQHHQA-----------VPFYGYSPAYIAADISYNHKLSYTGGS 142

Query: 98  YMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           YMNGHFSQVYP Q MVGANALMP+YP Y FHQ
Sbjct: 143 YMNGHFSQVYPGQAMVGANALMPMYPFYHFHQ 174


>ref|XP_002278641.2| PREDICTED: RNA-binding protein 38 isoform X1 [Vitis vinifera]
          Length = 254

 Score =  121 bits (303), Expect = 2e-25
 Identities = 58/92 (63%), Positives = 60/92 (65%)
 Frame = -1

Query: 278 HVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIATDMSYNHKLSYTGGS 99
           HV WYYP G                        VPFYGYSP YIA D+SYNHKLSYTGGS
Sbjct: 125 HVQWYYPAGTPAPPFHHQHHQA-----------VPFYGYSPAYIAADISYNHKLSYTGGS 173

Query: 98  YMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           YMNGHFSQVYP Q MVGANALMP+YP Y FHQ
Sbjct: 174 YMNGHFSQVYPGQAMVGANALMPMYPFYHFHQ 205


>ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223536836|gb|EEF38475.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 256

 Score =  120 bits (302), Expect = 3e-25
 Identities = 56/92 (60%), Positives = 62/92 (67%)
 Frame = -1

Query: 278 HVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIATDMSYNHKLSYTGGS 99
           HV WYYP G                        VPFYGY+PTY+ATD+SYNHKLSYTGGS
Sbjct: 133 HVQWYYPAGSPASPYHHHHHHQA----------VPFYGYTPTYVATDISYNHKLSYTGGS 182

Query: 98  YMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           YMNGHFSQVYP Q ++GAN LMP+YPLY FHQ
Sbjct: 183 YMNGHFSQVYPGQAIMGANTLMPMYPLYHFHQ 214


>ref|XP_010108447.1| RNA-binding protein 38 [Morus notabilis]
           gi|587932434|gb|EXC19488.1| RNA-binding protein 38
           [Morus notabilis]
          Length = 277

 Score =  119 bits (298), Expect = 9e-25
 Identities = 57/107 (53%), Positives = 67/107 (62%)
 Frame = -1

Query: 323 VGPRGXXXXXXXXXNHVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIA 144
           VGPR           HV WYYP G                        VP+YGYSPTY+A
Sbjct: 116 VGPRSMSPAPAN---HVQWYYPAGTPAAPFHHQQHHA-----------VPYYGYSPTYVA 161

Query: 143 TDMSYNHKLSYTGGSYMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           TD+SYNHKLSYTGG+YM+GHFSQVYP QP++GAN LMP+YP+Y +HQ
Sbjct: 162 TDISYNHKLSYTGGTYMSGHFSQVYPGQPIMGANTLMPMYPMYHYHQ 208


>ref|XP_011027014.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Populus
           euphratica]
          Length = 253

 Score =  116 bits (291), Expect = 6e-24
 Identities = 56/92 (60%), Positives = 59/92 (64%)
 Frame = -1

Query: 278 HVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIATDMSYNHKLSYTGGS 99
           HV WYYP G                        VPFYGYSP YIATD+S NHKL+YTGGS
Sbjct: 127 HVQWYYPAGSAAAASPFHHQHHQA---------VPFYGYSPAYIATDISGNHKLNYTGGS 177

Query: 98  YMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           YMNGHFSQVYP Q MVGAN LMP+YP Y FHQ
Sbjct: 178 YMNGHFSQVYPGQAMVGANTLMPMYPFYHFHQ 209


>ref|XP_011027013.1| PREDICTED: RNA-binding protein 24-like isoform X1 [Populus
           euphratica]
          Length = 260

 Score =  116 bits (291), Expect = 6e-24
 Identities = 56/92 (60%), Positives = 59/92 (64%)
 Frame = -1

Query: 278 HVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIATDMSYNHKLSYTGGS 99
           HV WYYP G                        VPFYGYSP YIATD+S NHKL+YTGGS
Sbjct: 127 HVQWYYPAGSAAAASPFHHQHHQA---------VPFYGYSPAYIATDISGNHKLNYTGGS 177

Query: 98  YMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           YMNGHFSQVYP Q MVGAN LMP+YP Y FHQ
Sbjct: 178 YMNGHFSQVYPGQAMVGANTLMPMYPFYHFHQ 209


>ref|XP_002315274.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|118481097|gb|ABK92502.1| unknown
           [Populus trichocarpa] gi|222864314|gb|EEF01445.1| RNA
           recognition motif-containing family protein [Populus
           trichocarpa]
          Length = 253

 Score =  115 bits (289), Expect = 1e-23
 Identities = 56/92 (60%), Positives = 58/92 (63%)
 Frame = -1

Query: 278 HVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIATDMSYNHKLSYTGGS 99
           HV WYYP G                        VPFYGYSP YIATD S NHKL+YTGGS
Sbjct: 127 HVQWYYPAGSAAAASPFHHQHHQA---------VPFYGYSPAYIATDTSGNHKLNYTGGS 177

Query: 98  YMNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           YMNGHFSQVYP Q MVGAN LMP+YP Y FHQ
Sbjct: 178 YMNGHFSQVYPGQAMVGANTLMPMYPFYHFHQ 209


>ref|XP_011032750.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Populus
           euphratica] gi|743779784|ref|XP_011033518.1| PREDICTED:
           RNA-binding protein 24-like isoform X2 [Populus
           euphratica]
          Length = 251

 Score =  115 bits (287), Expect = 2e-23
 Identities = 55/91 (60%), Positives = 58/91 (63%)
 Frame = -1

Query: 275 VPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIATDMSYNHKLSYTGGSY 96
           + WYYP G                        VPFYGYSP YIATD+SYNHKLSYTGG Y
Sbjct: 127 IQWYYPAGSAAASPFHHQHHQA----------VPFYGYSPAYIATDISYNHKLSYTGGPY 176

Query: 95  MNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           MNGHFSQVYP Q MVGAN LMP+YPLY  HQ
Sbjct: 177 MNGHFSQVYPGQAMVGANTLMPMYPLYHVHQ 207


>ref|XP_011031987.1| PREDICTED: RNA-binding protein 24-like isoform X1 [Populus
           euphratica]
          Length = 258

 Score =  115 bits (287), Expect = 2e-23
 Identities = 55/91 (60%), Positives = 58/91 (63%)
 Frame = -1

Query: 275 VPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIATDMSYNHKLSYTGGSY 96
           + WYYP G                        VPFYGYSP YIATD+SYNHKLSYTGG Y
Sbjct: 127 IQWYYPAGSAAASPFHHQHHQA----------VPFYGYSPAYIATDISYNHKLSYTGGPY 176

Query: 95  MNGHFSQVYPVQPMVGANALMPLYPLYRFHQ 3
           MNGHFSQVYP Q MVGAN LMP+YPLY  HQ
Sbjct: 177 MNGHFSQVYPGQAMVGANTLMPMYPLYHVHQ 207


>ref|XP_009780038.1| PREDICTED: RNA-binding protein 24-B-like isoform X2 [Nicotiana
           sylvestris]
          Length = 273

 Score =  114 bits (285), Expect = 3e-23
 Identities = 57/106 (53%), Positives = 62/106 (58%)
 Frame = -1

Query: 323 VGPRGXXXXXXXXXNHVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIA 144
           VGPR           HV WYYP                          +PFYGYSP YIA
Sbjct: 132 VGPRANPASPAG---HVQWYYPASGAPQAAAAPASPYHHHQP------LPFYGYSPAYIA 182

Query: 143 TDMSYNHKLSYTGGSYMNGHFSQVYPVQPMVGANALMPLYPLYRFH 6
           TDM+YNHKLSYTGG+YMNGHFSQVYP Q M+G NALMP+YP Y FH
Sbjct: 183 TDMNYNHKLSYTGGAYMNGHFSQVYPGQAMMGGNALMPMYPYYHFH 228


>ref|XP_009780037.1| PREDICTED: RNA-binding protein 24-B-like isoform X1 [Nicotiana
           sylvestris]
          Length = 274

 Score =  114 bits (285), Expect = 3e-23
 Identities = 57/106 (53%), Positives = 62/106 (58%)
 Frame = -1

Query: 323 VGPRGXXXXXXXXXNHVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIA 144
           VGPR           HV WYYP                          +PFYGYSP YIA
Sbjct: 133 VGPRANPASPAG---HVQWYYPASGAPQAAAAPASPYHHHQP------LPFYGYSPAYIA 183

Query: 143 TDMSYNHKLSYTGGSYMNGHFSQVYPVQPMVGANALMPLYPLYRFH 6
           TDM+YNHKLSYTGG+YMNGHFSQVYP Q M+G NALMP+YP Y FH
Sbjct: 184 TDMNYNHKLSYTGGAYMNGHFSQVYPGQAMMGGNALMPMYPYYHFH 229


>ref|XP_012456848.1| PREDICTED: RNA-binding protein 24-like isoform X3 [Gossypium
           raimondii] gi|763806694|gb|KJB73632.1| hypothetical
           protein B456_011G241500 [Gossypium raimondii]
          Length = 258

 Score =  113 bits (282), Expect = 6e-23
 Identities = 60/108 (55%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = -1

Query: 323 VGPRGXXXXXXXXXNHVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIA 144
           VGPR           HV WYYP                         AVPFYGYSPTYI 
Sbjct: 112 VGPRATSAAPAN---HVQWYYPA----------VGTPASPFHHQHHQAVPFYGYSPTYIP 158

Query: 143 TDMSYNHKLSYTGGSYMNGHFSQVYPV-QPMVGANALMPLYPLYRFHQ 3
           TDMSYNHKLSY+GGSYMNGHFSQVYP  Q +VGAN LMP+YP Y +HQ
Sbjct: 159 TDMSYNHKLSYSGGSYMNGHFSQVYPAGQAVVGANTLMPMYPFYHYHQ 206


>ref|XP_012456846.1| PREDICTED: RNA-binding protein 24-like isoform X1 [Gossypium
           raimondii] gi|763806693|gb|KJB73631.1| hypothetical
           protein B456_011G241500 [Gossypium raimondii]
          Length = 265

 Score =  113 bits (282), Expect = 6e-23
 Identities = 60/108 (55%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = -1

Query: 323 VGPRGXXXXXXXXXNHVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIA 144
           VGPR           HV WYYP                         AVPFYGYSPTYI 
Sbjct: 112 VGPRATSAAPAN---HVQWYYPA----------VGTPASPFHHQHHQAVPFYGYSPTYIP 158

Query: 143 TDMSYNHKLSYTGGSYMNGHFSQVYPV-QPMVGANALMPLYPLYRFHQ 3
           TDMSYNHKLSY+GGSYMNGHFSQVYP  Q +VGAN LMP+YP Y +HQ
Sbjct: 159 TDMSYNHKLSYSGGSYMNGHFSQVYPAGQAVVGANTLMPMYPFYHYHQ 206


>ref|XP_012456847.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Gossypium
           raimondii] gi|763806692|gb|KJB73630.1| hypothetical
           protein B456_011G241500 [Gossypium raimondii]
          Length = 263

 Score =  113 bits (282), Expect = 6e-23
 Identities = 60/108 (55%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
 Frame = -1

Query: 323 VGPRGXXXXXXXXXNHVPWYYPGGXXXXXXXXXXXXXXXXXXXXXXXAVPFYGYSPTYIA 144
           VGPR           HV WYYP                         AVPFYGYSPTYI 
Sbjct: 112 VGPRATSAAPAN---HVQWYYPA----------VGTPASPFHHQHHQAVPFYGYSPTYIP 158

Query: 143 TDMSYNHKLSYTGGSYMNGHFSQVYPV-QPMVGANALMPLYPLYRFHQ 3
           TDMSYNHKLSY+GGSYMNGHFSQVYP  Q +VGAN LMP+YP Y +HQ
Sbjct: 159 TDMSYNHKLSYSGGSYMNGHFSQVYPAGQAVVGANTLMPMYPFYHYHQ 206


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