BLASTX nr result

ID: Gardenia21_contig00032363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00032363
         (215 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP20039.1| unnamed protein product [Coffea canephora]             92   1e-16
ref|XP_007010187.1| Transmembrane amino acid transporter family ...    57   5e-06

>emb|CDP20039.1| unnamed protein product [Coffea canephora]
          Length = 119

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 45/47 (95%), Positives = 45/47 (95%), Gaps = 1/47 (2%)
 Frame = -3

Query: 138 MGTAVLDSPKLSPEHGENGAA-TVGPKELDAGALFVLKSRGTWLHCG 1
           MGTAVLDSPKLSPEHGE GAA TVGPKELDAGALFVLKSRGTWLHCG
Sbjct: 1   MGTAVLDSPKLSPEHGEKGAAATVGPKELDAGALFVLKSRGTWLHCG 47


>ref|XP_007010187.1| Transmembrane amino acid transporter family protein [Theobroma
           cacao] gi|508727100|gb|EOY18997.1| Transmembrane amino
           acid transporter family protein [Theobroma cacao]
          Length = 458

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/46 (63%), Positives = 32/46 (69%)
 Frame = -3

Query: 138 MGTAVLDSPKLSPEHGENGAATVGPKELDAGALFVLKSRGTWLHCG 1
           MGT   +S  LS    ENG     P+ELDAGALFVLKSRG+WLHCG
Sbjct: 1   MGTVAPNSNDLSSTDKENGVVQ-SPEELDAGALFVLKSRGSWLHCG 45


Top