BLASTX nr result
ID: Gardenia21_contig00032042
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00032042
(645 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP19325.1| unnamed protein product [Coffea canephora] 329 7e-88
ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 241 3e-61
ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 234 2e-59
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 232 2e-58
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 230 5e-58
ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [S... 224 3e-56
gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] 219 8e-55
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [S... 218 2e-54
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 209 8e-52
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 208 2e-51
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [C... 199 9e-49
ref|XP_013457822.1| RNA-dependent RNA polymerase family protein ... 199 1e-48
ref|XP_003608944.2| RNA-dependent RNA polymerase family protein ... 199 1e-48
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th... 197 4e-48
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 196 1e-47
ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [C... 195 2e-47
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [F... 192 2e-46
ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 191 2e-46
ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [E... 190 5e-46
ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [G... 188 2e-45
>emb|CDP19325.1| unnamed protein product [Coffea canephora]
Length = 1120
Score = 329 bits (844), Expect = 7e-88
Identities = 157/181 (86%), Positives = 169/181 (93%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
MAVEER TATVRVQNIPQSANAKDL AFF+ST+G++TVFAIEIFSEH+NWKSRGHGKVQF
Sbjct: 1 MAVEERTTATVRVQNIPQSANAKDLLAFFQSTIGEDTVFAIEIFSEHKNWKSRGHGKVQF 60
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
ETLEAK+K L LSE+GKLFFKGSHLRLSHSIDEVIFRPVD KLRIKNGVLRTG ++RNDC
Sbjct: 61 ETLEAKIKCLSLSEKGKLFFKGSHLRLSHSIDEVIFRPVDSKLRIKNGVLRTGILLRNDC 120
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDGRNPNAVLLK 54
MSVLE W GVK WIMPER +EFWLSHGGECYKLEVQFGDVLESCGCCLD +NPNAVLLK
Sbjct: 121 MSVLERWDGVKVWIMPERNILEFWLSHGGECYKLEVQFGDVLESCGCCLDDQNPNAVLLK 180
Query: 53 V 51
+
Sbjct: 181 L 181
>ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana
tomentosiformis]
Length = 1120
Score = 241 bits (615), Expect = 3e-61
Identities = 115/182 (63%), Positives = 148/182 (81%), Gaps = 1/182 (0%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
M VE+RITATVRV NIPQ+A AK LF FFES++GK +VFA +IFSEH+NWKSRGHG+VQF
Sbjct: 1 MGVEKRITATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
ET ++K++SL LSE+GKL FKG L L+ S D++I RP++P R + G+L TG +++ND
Sbjct: 61 ETAQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIEPNYRFQKGILHTGVLLKNDY 120
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHG-GECYKLEVQFGDVLESCGCCLDGRNPNAVLL 57
M VLE+W VKT IMPERKS+EFW+SH GECY+LEVQFGD++E+CGC L+ P A+LL
Sbjct: 121 MEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCGCSLEDEKP-ALLL 179
Query: 56 KV 51
K+
Sbjct: 180 KL 181
>ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
Length = 1120
Score = 234 bits (598), Expect = 2e-59
Identities = 111/182 (60%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
M VE+R+TATVRV NIPQ+A AK LF FFES++ K +VFA +IFSEH+NWKSRGHG+VQF
Sbjct: 1 MGVEKRVTATVRVSNIPQTAIAKQLFDFFESSIRKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
ET ++K+++L LSE+GKL FKG L L+ S D++I RP++P R + G+L TG +++ND
Sbjct: 61 ETSQSKLQALSLSEQGKLIFKGHQLILTSSFDDIIVRPIEPNYRFQKGILHTGVLLKNDY 120
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHG-GECYKLEVQFGDVLESCGCCLDGRNPNAVLL 57
M VLE+W VKT IMPERKS+EFW+S+ GECY+LEVQFGD++E+CGC L+ P A+LL
Sbjct: 121 MEVLETWENVKTLIMPERKSLEFWVSYAKGECYRLEVQFGDIIETCGCSLEDEKP-ALLL 179
Query: 56 KV 51
K+
Sbjct: 180 KL 181
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 232 bits (591), Expect = 2e-58
Identities = 113/181 (62%), Positives = 142/181 (78%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
M VE+R TATVRV NIPQSA AKDLF FF+S +GK +VFA +IFSEH+NWKSRGHG+VQF
Sbjct: 1 MGVEKRATATVRVSNIPQSAIAKDLFDFFDSLIGKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
ETL+ K+ L LSE+G L FKG L L S D++I RPV+PK R ++G+L TG +V+ND
Sbjct: 61 ETLQDKLHCLSLSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRFQDGILHTGLLVKNDV 120
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDGRNPNAVLLK 54
M VLE+W VKT IMPERK +EFW+SH ECY+LEVQFGDV+E+ C L+ + +A+LLK
Sbjct: 121 MQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVVEATVCSLENQK-SALLLK 179
Query: 53 V 51
+
Sbjct: 180 L 180
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 230 bits (587), Expect = 5e-58
Identities = 111/182 (60%), Positives = 144/182 (79%), Gaps = 1/182 (0%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
M VE+R+TATVRV NIPQ+A AK LF FFES++GK +VFA +IFSEH+NWKSRGHG+VQF
Sbjct: 1 MGVEKRVTATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
ET ++K++SL LSE+GKL FKG L L+ S D++I RP++ R + G+L TG ++ ND
Sbjct: 61 ETSQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKGILHTGILLENDY 120
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHG-GECYKLEVQFGDVLESCGCCLDGRNPNAVLL 57
M VLE+W VKT IMPERKS+EFW+SH GECY+LEVQFGD++E+C C L+ A+LL
Sbjct: 121 MEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSLEDEK-TALLL 179
Query: 56 KV 51
K+
Sbjct: 180 KL 181
>ref|XP_011071821.1| PREDICTED: RNA-dependent RNA polymerase 2 [Sesamum indicum]
Length = 1133
Score = 224 bits (571), Expect = 3e-56
Identities = 110/181 (60%), Positives = 143/181 (79%), Gaps = 5/181 (2%)
Frame = -2
Query: 578 RITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQFETLEA 399
R T TV+V NIPQ+A A++L +F EST+GK TVFAIEIF+EH+NWKSRGHG+VQF++ EA
Sbjct: 10 RPTLTVKVSNIPQTAIAQELLSFLESTLGKGTVFAIEIFTEHKNWKSRGHGRVQFDSPEA 69
Query: 398 KVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNG---VLRTGFMVRNDCMS 228
K+K+L LSE+ KL FKG ++ +S S ++VI RPV+P+ R+ G VL G MVR DCM
Sbjct: 70 KIKALSLSEQRKLLFKGFYISISPSFEDVIIRPVEPRNRVGYGGGMVLLAGVMVRADCMG 129
Query: 227 VLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCL--DGRNPNAVLLK 54
+LESW GV+ W MPERK +EF+++H GECYKLEVQFGDVLE+ GC L DG+ +A+LLK
Sbjct: 130 ILESWDGVRLWFMPERKKLEFFVNHEGECYKLEVQFGDVLETRGCYLDGDGKKVDAILLK 189
Query: 53 V 51
+
Sbjct: 190 L 190
>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
Length = 972
Score = 219 bits (559), Expect = 8e-55
Identities = 110/186 (59%), Positives = 136/186 (73%), Gaps = 5/186 (2%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
+ E R T TV+V NIP A AKDL AF ES +GK TVFA+EIF+E NWKSRGHG+VQF
Sbjct: 5 LLTEARPTLTVKVTNIPPIAIAKDLQAFLESVLGKGTVFAVEIFTERENWKSRGHGRVQF 64
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNG---VLRTGFMVR 243
E+ EAK+++L LS K FKG +L ++HS++E+I RPVDP R+ +G VL G M+R
Sbjct: 65 ESPEAKIEALSLSHHRKFLFKGFYLSVTHSLEEIIIRPVDPIYRVGDGGGLVLFAGIMIR 124
Query: 242 NDCMSVLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDG--RNPN 69
DCM LESW+G+K W MPERK I F++ HGGE YKLEVQFGDVLES GCCL G +
Sbjct: 125 ADCMGTLESWNGMKLWFMPERKKIHFFVDHGGESYKLEVQFGDVLESRGCCLGGGDMKVD 184
Query: 68 AVLLKV 51
A+LLK+
Sbjct: 185 AILLKL 190
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [Solanum lycopersicum]
Length = 1119
Score = 218 bits (555), Expect = 2e-54
Identities = 108/181 (59%), Positives = 135/181 (74%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
M VE+R TATVRV NIPQSA AKDL FF+S +GK +VFA +I SEH+NWKSRGHG+VQF
Sbjct: 1 MGVEKRATATVRVSNIPQSAIAKDLSNFFDSLIGKGSVFACDIHSEHKNWKSRGHGRVQF 60
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
ETL+ K+ L L+E+G L FKG L L S D++I RPV+PK R + G+L TG +V D
Sbjct: 61 ETLQDKLHCLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAGILHTGLLVEKDV 120
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDGRNPNAVLLK 54
M VLE+W VKT IMPERK +EFW+SH ECY+LEVQFGDV E C ++ + +A+LLK
Sbjct: 121 MQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGTLCSVENQK-SALLLK 179
Query: 53 V 51
+
Sbjct: 180 L 180
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 209 bits (533), Expect = 8e-52
Identities = 101/181 (55%), Positives = 132/181 (72%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
MA+ ER TVRV NIPQ+ AK+L +F +S +G ++VFA+EI S+H+NWKSRG G+VQF
Sbjct: 1 MALAER--PTVRVSNIPQTVTAKELLSFLQSKLGTDSVFAVEIISDHKNWKSRGFGRVQF 58
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
TLEAK ++ LS + L FK LRLS + D++I RPVDPK R+ VL GFMV+ DC
Sbjct: 59 TTLEAKSEAYSLSLQNGLVFKSESLRLSETYDDIIQRPVDPKRRLNGTVLHAGFMVKGDC 118
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDGRNPNAVLLK 54
MS+LESW GV+ W+MPERK +EFW+ ECYKLE+ F +++ES GC L G NA+LLK
Sbjct: 119 MSMLESWEGVRAWVMPERKRVEFWVWLRDECYKLEIAFENIMESFGCRLGGEKVNALLLK 178
Query: 53 V 51
+
Sbjct: 179 L 179
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 208 bits (529), Expect = 2e-51
Identities = 102/181 (56%), Positives = 135/181 (74%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
MAV ER TV+V NIP++A AK+L++F ES +G T++A+EI +EH+NWKSRG G+VQF
Sbjct: 1 MAVGER--PTVKVSNIPKTAIAKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQF 58
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
ETL+AK + LS +G L F+GS L +S + D++I RPV+P+ ++ +GVL GF+V +DC
Sbjct: 59 ETLQAKRAADLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSGVLHVGFLVEDDC 118
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDGRNPNAVLLK 54
M VLESW GVKT +MPER +EFW+ GE YKLEV F DVLES CCL G NA+LLK
Sbjct: 119 MLVLESWEGVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACCLGGGKVNALLLK 178
Query: 53 V 51
+
Sbjct: 179 L 179
>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cicer arietinum]
Length = 1122
Score = 199 bits (507), Expect = 9e-49
Identities = 98/181 (54%), Positives = 125/181 (69%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
M + T TVRV NIPQSA AKDL F EST+G +VFA+EIFS+H NWKSRG G+VQF
Sbjct: 1 MGIPSSETPTVRVFNIPQSATAKDLLHFLESTVGPSSVFALEIFSDHSNWKSRGSGRVQF 60
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
ET EAK K+L LS KL F LRL+ S D+++ RP P R+ NG L GF + D
Sbjct: 61 ETFEAKSKALSLSSNDKLLFNSHFLRLAASSDDIVPRPPLPCNRLHNGTLHAGFPLGPDR 120
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDGRNPNAVLLK 54
MSV++SW GVK W+MPER ++FW++H +C+KLE+ F ++LE G DG PNA+LLK
Sbjct: 121 MSVIQSWEGVKGWVMPERNRLDFWVTHHDQCFKLEIPFENILECDGFSSDGSKPNALLLK 180
Query: 53 V 51
+
Sbjct: 181 L 181
>ref|XP_013457822.1| RNA-dependent RNA polymerase family protein [Medicago truncatula]
gi|657390297|gb|KEH31853.1| RNA-dependent RNA polymerase
family protein [Medicago truncatula]
Length = 1123
Score = 199 bits (505), Expect = 1e-48
Identities = 96/182 (52%), Positives = 128/182 (70%), Gaps = 1/182 (0%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
M + T TVRV NIP +A A DL + E+T+G+ +VFA+EIFS++ NWKSRG G+VQF
Sbjct: 1 MVIPSSETPTVRVTNIPHTATANDLLRYLETTVGRSSVFALEIFSDYTNWKSRGVGRVQF 60
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
ETLEAK K+L L+E KL L L S D++I RP P+ RI NG L GF + DC
Sbjct: 61 ETLEAKSKALTLAENKKLLLSSHFLCLDASSDDIIPRPALPRNRINNGALYAGFPIGPDC 120
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLD-GRNPNAVLL 57
MSVL+SW GV+ W+MPER+ ++FW++HG +C+KLE+ F ++LE G C D G PNA+LL
Sbjct: 121 MSVLQSWEGVRGWVMPERQRLDFWVTHGDQCFKLEIPFENILECDGYCSDEGSKPNALLL 180
Query: 56 KV 51
K+
Sbjct: 181 KL 182
>ref|XP_003608944.2| RNA-dependent RNA polymerase family protein [Medicago truncatula]
gi|657390296|gb|AES91141.2| RNA-dependent RNA polymerase
family protein [Medicago truncatula]
Length = 1277
Score = 199 bits (505), Expect = 1e-48
Identities = 96/182 (52%), Positives = 128/182 (70%), Gaps = 1/182 (0%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
M + T TVRV NIP +A A DL + E+T+G+ +VFA+EIFS++ NWKSRG G+VQF
Sbjct: 1 MVIPSSETPTVRVTNIPHTATANDLLRYLETTVGRSSVFALEIFSDYTNWKSRGVGRVQF 60
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
ETLEAK K+L L+E KL L L S D++I RP P+ RI NG L GF + DC
Sbjct: 61 ETLEAKSKALTLAENKKLLLSSHFLCLDASSDDIIPRPALPRNRINNGALYAGFPIGPDC 120
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLD-GRNPNAVLL 57
MSVL+SW GV+ W+MPER+ ++FW++HG +C+KLE+ F ++LE G C D G PNA+LL
Sbjct: 121 MSVLQSWEGVRGWVMPERQRLDFWVTHGDQCFKLEIPFENILECDGYCSDEGSKPNALLL 180
Query: 56 KV 51
K+
Sbjct: 181 KL 182
>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
polymerase 2 isoform 1 [Theobroma cacao]
gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
Length = 1149
Score = 197 bits (501), Expect = 4e-48
Identities = 97/177 (54%), Positives = 125/177 (70%)
Frame = -2
Query: 581 ERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQFETLE 402
ER T+RV N+PQ+A AKDL F E +G +TVFAIEI ++ NWKSRG G+VQF TLE
Sbjct: 10 ERERPTLRVTNVPQTAIAKDLLEFLEYKLGTDTVFAIEISTDRNNWKSRGFGRVQFATLE 69
Query: 401 AKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDCMSVL 222
AK K+ LS R L FK L+LS + D++I RP+ R+ GVL GFMV++D + VL
Sbjct: 70 AKSKAHLLSLRNDLVFKSHSLKLSETYDDIIPRPIRADHRLDGGVLHVGFMVQDDYLRVL 129
Query: 221 ESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDGRNPNAVLLKV 51
E W V+ W+MPER+ +EFWL + GECYKLEV F DVLE+ GCC +G + NA+LL+V
Sbjct: 130 ERWEDVRGWLMPERRRLEFWLWNNGECYKLEVLFDDVLETVGCCFNGSSCNALLLRV 186
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus] gi|700208501|gb|KGN63597.1|
hypothetical protein Csa_1G005580 [Cucumis sativus]
Length = 1117
Score = 196 bits (498), Expect = 1e-47
Identities = 99/181 (54%), Positives = 128/181 (70%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
MA ER +T+RV N+P+SA A+DL F S +G ++VFAIEIF+E +NWKSRG G+VQF
Sbjct: 1 MAQPER--STLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQF 58
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
TLEAK K++ LS + L F +LR S D+++ RPV R +NGVL GFM++ +
Sbjct: 59 TTLEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEER 118
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDGRNPNAVLLK 54
MSVLESW GVK WIMPER+ IEFW+ H ECYKLEV F ++LE+ G CL NA+LLK
Sbjct: 119 MSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLK 178
Query: 53 V 51
+
Sbjct: 179 L 179
>ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo]
Length = 1117
Score = 195 bits (495), Expect = 2e-47
Identities = 98/181 (54%), Positives = 127/181 (70%)
Frame = -2
Query: 593 MAVEERITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQF 414
MA ER +T+RV N+P+SA A+DL F S +G ++VFAIEIF+E +NWKSRG G+VQF
Sbjct: 1 MAQPER--STLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQF 58
Query: 413 ETLEAKVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDC 234
TLEAK K++ LS + L F +LR S D+++ RPV R +NGVL GFM++ +
Sbjct: 59 TTLEAKAKAMALSVQNNLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEER 118
Query: 233 MSVLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDGRNPNAVLLK 54
MSVLESW GVK WIMPER+ IEFW+ H ECYKLEV F ++LE+ G CL NA+L K
Sbjct: 119 MSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGYCLGEEKLNALLFK 178
Query: 53 V 51
+
Sbjct: 179 L 179
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [Fragaria vesca subsp.
vesca]
Length = 1136
Score = 192 bits (487), Expect = 2e-46
Identities = 87/172 (50%), Positives = 123/172 (71%)
Frame = -2
Query: 566 TVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQFETLEAKVKS 387
TVRV NIP + A +L F ES +G ++VFA+EI S+H+NWKSRG+G++QF L K ++
Sbjct: 11 TVRVTNIPCTITATELLHFLESALGPDSVFAVEIVSDHKNWKSRGYGRIQFTALRHKARA 70
Query: 386 LYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDCMSVLESWHG 207
LS LFFK +LRL + D++I RP+DP+ R+ + VL GF+V ++ MSVLESW G
Sbjct: 71 QSLSSSADLFFKSHNLRLFEAHDDIIPRPLDPRHRLNSTVLHAGFVVNDETMSVLESWEG 130
Query: 206 VKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDGRNPNAVLLKV 51
V+ W+MPERK +EFW+ G+CYK+E+ F +++ES GCCL G NA+ LK+
Sbjct: 131 VRAWVMPERKRVEFWVWRVGDCYKMEIAFENIVESVGCCLGGDKVNALRLKL 182
>ref|XP_003550744.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Glycine max]
gi|947053879|gb|KRH03332.1| hypothetical protein
GLYMA_17G091500 [Glycine max]
Length = 1120
Score = 191 bits (486), Expect = 2e-46
Identities = 95/176 (53%), Positives = 129/176 (73%), Gaps = 1/176 (0%)
Frame = -2
Query: 575 ITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQFETLEAK 396
++ TVRV NIPQSA AKDL F EST+G TVFA+EIFS++ NWKSRG G+VQFETL+A+
Sbjct: 8 LSHTVRVSNIPQSATAKDLLDFLESTLGSSTVFALEIFSDNPNWKSRGFGRVQFETLDAR 67
Query: 395 VKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDCMSVLES 216
++L LS+ +L F LRLS + ++IFR P+ R++NGVL GFM+ + MSVLES
Sbjct: 68 SRALSLSQLNQLLFNRHFLRLSETDSDIIFR---PQHRLQNGVLYAGFMLSDHRMSVLES 124
Query: 215 WHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCL-DGRNPNAVLLKV 51
W G+ W++P+RK ++FW+ H G+CY+LE F D+LES G CL + NA+LLK+
Sbjct: 125 WEGIAGWVLPQRKRLDFWVWHNGDCYRLEFLFEDILESHGYCLGEDARLNALLLKM 180
>ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [Erythranthe guttatus]
gi|604343689|gb|EYU42543.1| hypothetical protein
MIMGU_mgv1a000463mg [Erythranthe guttata]
Length = 1135
Score = 190 bits (483), Expect = 5e-46
Identities = 101/181 (55%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Frame = -2
Query: 578 RITATVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQFETLEA 399
R T TV+VQNIPQ+ A +L F ES +GK T+FA+EIF+E NWKSRGHG+VQFE EA
Sbjct: 5 RPTLTVKVQNIPQTIIAHELQTFLESAVGKGTIFAVEIFTERTNWKSRGHGRVQFEEQEA 64
Query: 398 KVKSLYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKN---GVLRTGFMVRNDCMS 228
K+K+L LSE+G L FKG L + S ++VI RPVDP R+ N G MVR++CM+
Sbjct: 65 KIKALSLSEQGNLIFKGFRLSILPSSEDVIIRPVDPTNRVGNCAGSGFVAGVMVRDNCMA 124
Query: 227 VLESWHGVKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLD--GRNPNAVLLK 54
VLE+W G W MPERK ++F + + GE YKLEVQFGDV ES CCLD G +A+LLK
Sbjct: 125 VLENWVG-DLWFMPERKRLDFVVIYDGESYKLEVQFGDVAESGRCCLDRGGEKVDAILLK 183
Query: 53 V 51
+
Sbjct: 184 L 184
>ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [Gossypium raimondii]
gi|763786137|gb|KJB53208.1| hypothetical protein
B456_008G296900 [Gossypium raimondii]
Length = 1147
Score = 188 bits (478), Expect = 2e-45
Identities = 90/172 (52%), Positives = 118/172 (68%)
Frame = -2
Query: 566 TVRVQNIPQSANAKDLFAFFESTMGKETVFAIEIFSEHRNWKSRGHGKVQFETLEAKVKS 387
T+R+ NIPQ+A AKDL FFES +G ++VFAIEI ++ NWKSRG G+VQF +AK +
Sbjct: 10 TLRLTNIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQAKSDA 69
Query: 386 LYLSERGKLFFKGSHLRLSHSIDEVIFRPVDPKLRIKNGVLRTGFMVRNDCMSVLESWHG 207
L LS L FK L+LS + D++I RP+ R+ GVL GFM +DC+ VLE W G
Sbjct: 70 LRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGGVLHAGFMSSDDCLRVLERWEG 129
Query: 206 VKTWIMPERKSIEFWLSHGGECYKLEVQFGDVLESCGCCLDGRNPNAVLLKV 51
V+ WIMPER+ +EFW+ GECYKL+ F D+ E+ GCC DG NA+LL+V
Sbjct: 130 VRGWIMPERRRLEFWVWTDGECYKLDFLFDDIFETVGCCFDGSACNALLLRV 181