BLASTX nr result
ID: Gardenia21_contig00030616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00030616
(513 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP16291.1| unnamed protein product [Coffea canephora] 116 6e-24
ref|XP_010319559.1| PREDICTED: cleavage and polyadenylation spec... 77 4e-12
ref|XP_009608302.1| PREDICTED: cleavage and polyadenylation spec... 77 4e-12
ref|XP_009608301.1| PREDICTED: cleavage and polyadenylation spec... 77 4e-12
ref|XP_007045271.1| Cleavage and polyadenylation specificity fac... 65 2e-08
ref|XP_012460570.1| PREDICTED: cleavage and polyadenylation spec... 65 3e-08
gb|KJB78189.1| hypothetical protein B456_012G1826002, partial [G... 65 3e-08
ref|XP_012834810.1| PREDICTED: cleavage and polyadenylation spec... 64 4e-08
ref|XP_012834811.1| PREDICTED: cleavage and polyadenylation spec... 64 4e-08
ref|XP_010107067.1| hypothetical protein L484_001390 [Morus nota... 63 1e-07
ref|XP_011021767.1| PREDICTED: cleavage and polyadenylation spec... 60 5e-07
ref|XP_011021766.1| PREDICTED: cleavage and polyadenylation spec... 60 5e-07
ref|XP_012072306.1| PREDICTED: cleavage and polyadenylation spec... 59 1e-06
gb|KDP38118.1| hypothetical protein JCGZ_04761 [Jatropha curcas] 59 1e-06
ref|XP_011098509.1| PREDICTED: cleavage and polyadenylation spec... 59 2e-06
ref|XP_011098501.1| PREDICTED: cleavage and polyadenylation spec... 59 2e-06
gb|KDO60762.1| hypothetical protein CISIN_1g043917mg, partial [C... 58 2e-06
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 58 2e-06
ref|XP_007225129.1| hypothetical protein PRUPE_ppa002557mg [Prun... 58 3e-06
ref|XP_008221359.1| PREDICTED: cleavage and polyadenylation spec... 57 4e-06
>emb|CDP16291.1| unnamed protein product [Coffea canephora]
Length = 647
Score = 116 bits (291), Expect = 6e-24
Identities = 52/57 (91%), Positives = 52/57 (91%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVLNKC 343
ESF VS CSKEKCPHRMND PDYTYEAVHFCCTWS ADEKLARNVISFMK LVLNKC
Sbjct: 591 ESFIVSVCSKEKCPHRMNDGPDYTYEAVHFCCTWSGADEKLARNVISFMKNLVLNKC 647
>ref|XP_010319559.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Solanum lycopersicum]
Length = 1059
Score = 77.4 bits (189), Expect = 4e-12
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVL 352
+SFTVS C KEKCPHR++ +PD T EAV+FCCTWS DEKLA VIS MK L L
Sbjct: 593 QSFTVSPCLKEKCPHRIHVNPDSTSEAVNFCCTWSMEDEKLAWRVISSMKNLEL 646
>ref|XP_009608302.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X2 [Nicotiana tomentosiformis]
Length = 606
Score = 77.4 bits (189), Expect = 4e-12
Identities = 37/54 (68%), Positives = 39/54 (72%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVL 352
ESFTVS C KEKCPHR + SPD T E V+FCC WS DEKLA VIS MK L L
Sbjct: 550 ESFTVSVCLKEKCPHRTHVSPDSTSETVNFCCLWSMVDEKLAWRVISIMKNLEL 603
>ref|XP_009608301.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X1 [Nicotiana tomentosiformis]
Length = 649
Score = 77.4 bits (189), Expect = 4e-12
Identities = 37/54 (68%), Positives = 39/54 (72%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVL 352
ESFTVS C KEKCPHR + SPD T E V+FCC WS DEKLA VIS MK L L
Sbjct: 593 ESFTVSVCLKEKCPHRTHVSPDSTSETVNFCCLWSMVDEKLAWRVISIMKNLEL 646
>ref|XP_007045271.1| Cleavage and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao] gi|508709206|gb|EOY01103.1| Cleavage
and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao]
Length = 657
Score = 65.1 bits (157), Expect = 2e-08
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVL 352
ESF +S C K+ CPHR++DS E V FCC+WS ADE LA +IS MK L
Sbjct: 594 ESFCLSICLKDNCPHRISDSLQNDSEVVFFCCSWSVADEMLAWKIISIMKNYTL 647
>ref|XP_012460570.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Gossypium raimondii]
gi|823255820|ref|XP_012460571.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 3-II
[Gossypium raimondii] gi|823255822|ref|XP_012460572.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit 3-II [Gossypium raimondii]
gi|823255824|ref|XP_012460573.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 3-II
[Gossypium raimondii] gi|823255826|ref|XP_012460574.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit 3-II [Gossypium raimondii]
Length = 642
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVL 352
ESF VS CS + CPHR++ S E+V FCC WS ADEKLA +IS MK L
Sbjct: 589 ESFHVSVCSSDNCPHRLSSSLQNGSESVFFCCHWSVADEKLAWKIISIMKNSTL 642
>gb|KJB78189.1| hypothetical protein B456_012G1826002, partial [Gossypium
raimondii] gi|763811288|gb|KJB78190.1| hypothetical
protein B456_012G1826002, partial [Gossypium raimondii]
gi|763811289|gb|KJB78191.1| hypothetical protein
B456_012G1826002, partial [Gossypium raimondii]
Length = 420
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVL 352
ESF VS CS + CPHR++ S E+V FCC WS ADEKLA +IS MK L
Sbjct: 367 ESFHVSVCSSDNCPHRLSSSLQNGSESVFFCCHWSVADEKLAWKIISIMKNSTL 420
>ref|XP_012834810.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X1 [Erythranthe guttatus]
Length = 647
Score = 63.9 bits (154), Expect = 4e-08
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVLN 349
+SF SFCSK KCP+R + S + VHFCC WS DE+LA VIS MK L L+
Sbjct: 588 QSFVGSFCSKAKCPYRTDVSFQSVLDTVHFCCAWSMGDEELAWRVISTMKNLKLS 642
>ref|XP_012834811.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X2 [Erythranthe guttatus]
gi|604335815|gb|EYU39703.1| hypothetical protein
MIMGU_mgv1a002729mg [Erythranthe guttata]
Length = 643
Score = 63.9 bits (154), Expect = 4e-08
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVLN 349
+SF SFCSK KCP+R + S + VHFCC WS DE+LA VIS MK L L+
Sbjct: 584 QSFVGSFCSKAKCPYRTDVSFQSVLDTVHFCCAWSMGDEELAWRVISTMKNLKLS 638
>ref|XP_010107067.1| hypothetical protein L484_001390 [Morus notabilis]
gi|587969209|gb|EXC54202.1| hypothetical protein
L484_001390 [Morus notabilis]
Length = 244
Score = 62.8 bits (151), Expect = 1e-07
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVLN 349
ESF +S CSK+ CP+R+ DS E++ CCTWS DEK+A +IS +K LN
Sbjct: 173 ESFHLSICSKDSCPYRITDSAQNKSESLFCCCTWSVEDEKIAWKIISILKNFDLN 227
>ref|XP_011021767.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X2 [Populus euphratica]
gi|743822726|ref|XP_011021768.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 3-II isoform
X2 [Populus euphratica]
Length = 629
Score = 60.5 bits (145), Expect = 5e-07
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVL 352
ESF VS C K+ CP+R+ D V+FCC+WSAADEKLA +IS M+ L
Sbjct: 562 ESFHVSVCVKDNCPYRIIDDSQKEAATVYFCCSWSAADEKLAWEIISAMERFSL 615
>ref|XP_011021766.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X1 [Populus euphratica]
Length = 657
Score = 60.5 bits (145), Expect = 5e-07
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKTLVL 352
ESF VS C K+ CP+R+ D V+FCC+WSAADEKLA +IS M+ L
Sbjct: 590 ESFHVSVCVKDNCPYRIIDDSQKEAATVYFCCSWSAADEKLAWEIISAMERFSL 643
>ref|XP_012072306.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Jatropha curcas]
Length = 658
Score = 59.3 bits (142), Expect = 1e-06
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHR-MNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKT--LVLNKC 343
ESF VS C K++CP+R M DSP A+ FCC+WS ADEK A +I+ M+ L + KC
Sbjct: 594 ESFHVSICMKDECPYRVMIDSPREKSTAMFFCCSWSVADEKFAWEIITTMEKCHLTIQKC 653
>gb|KDP38118.1| hypothetical protein JCGZ_04761 [Jatropha curcas]
Length = 379
Score = 59.3 bits (142), Expect = 1e-06
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHR-MNDSPDYTYEAVHFCCTWSAADEKLARNVISFMKT--LVLNKC 343
ESF VS C K++CP+R M DSP A+ FCC+WS ADEK A +I+ M+ L + KC
Sbjct: 315 ESFHVSICMKDECPYRVMIDSPREKSTAMFFCCSWSVADEKFAWEIITTMEKCHLTIQKC 374
>ref|XP_011098509.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X2 [Sesamum indicum]
Length = 640
Score = 58.5 bits (140), Expect = 2e-06
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDS-PDYTYEAVHFCCTWSAADEKLARNVISFMKTLVLN 349
+S VSFCS EKCPHR S + VHFCC+WS AD+ LA +++ +K L L+
Sbjct: 584 QSVVVSFCSNEKCPHRTGVSLQSVDKKEVHFCCSWSVADDALAWRIVASIKNLELD 639
>ref|XP_011098501.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X1 [Sesamum indicum]
Length = 644
Score = 58.5 bits (140), Expect = 2e-06
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDS-PDYTYEAVHFCCTWSAADEKLARNVISFMKTLVLN 349
+S VSFCS EKCPHR S + VHFCC+WS AD+ LA +++ +K L L+
Sbjct: 588 QSVVVSFCSNEKCPHRTGVSLQSVDKKEVHFCCSWSVADDALAWRIVASIKNLELD 643
>gb|KDO60762.1| hypothetical protein CISIN_1g043917mg, partial [Citrus sinensis]
Length = 423
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMK 364
ESF +S C K+ CP+R+ + + FCCTWSAAD+KLAR +IS M+
Sbjct: 367 ESFHLSVCLKDTCPYRITNGLEDKPRTAFFCCTWSAADDKLARKIISAME 416
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVISFMK 364
ESF +S C K+ CP+R+ + + FCCTWSAAD+KLAR +IS M+
Sbjct: 590 ESFHLSVCLKDTCPYRITNGLEDKPRTAFFCCTWSAADDKLARKIISAME 639
>ref|XP_007225129.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
gi|462422065|gb|EMJ26328.1| hypothetical protein
PRUPE_ppa002557mg [Prunus persica]
Length = 658
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVIS 373
ESF VS C K CP+R+ D + + EA FCC+W ADEKLA +IS
Sbjct: 597 ESFHVSICLKNNCPYRLMDVQNKSQEAAFFCCSWGTADEKLAWKIIS 643
>ref|XP_008221359.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Prunus mume]
Length = 943
Score = 57.4 bits (137), Expect = 4e-06
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = -1
Query: 513 ESFTVSFCSKEKCPHRMNDSPDYTYEAVHFCCTWSAADEKLARNVIS 373
ESF VS C K CP+R+ D + + EA FCC+W ADEKLA +IS
Sbjct: 597 ESFHVSICLKNNCPYRLMDVQNKSQEAAFFCCSWGMADEKLAWKIIS 643