BLASTX nr result

ID: Gardenia21_contig00030565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00030565
         (233 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIG89848.1| hypothetical protein (mitochondrion) [Capsicum an...    50   1e-07
gb|AAA84679.1| unknown protein (chloroplast) [Nicotiana tabacum]...    60   5e-07

>gb|AIG89848.1| hypothetical protein (mitochondrion) [Capsicum annuum]
          Length = 132

 Score = 50.1 bits (118), Expect(2) = 1e-07
 Identities = 25/41 (60%), Positives = 29/41 (70%)
 Frame = +2

Query: 74  LLPWICHLLFRIIARFHSYNYLFVDKITHGKG*FADEELVY 196
           LLP  C LLF+I++RF S N LF +K T GKG F DEEL Y
Sbjct: 92  LLPSTCRLLFQILSRFPSSNSLFFEKRTVGKGRFTDEELAY 132



 Score = 32.3 bits (72), Expect(2) = 1e-07
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +3

Query: 3   IYGLVVALALLFANP 47
           IYGLVVALALLFANP
Sbjct: 65  IYGLVVALALLFANP 79


>gb|AAA84679.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224353|prf||1102209G ORF 7
          Length = 51

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 30/38 (78%), Positives = 31/38 (81%)
 Frame = -1

Query: 188 IPHPQISPSRGLFCQRISNCRSEILL*FEKANDKSKAI 75
           IPHPQISPSR  F QRI N R EIL+ FEKANDKSKAI
Sbjct: 3   IPHPQISPSRRFFSQRIKNWRREILIEFEKANDKSKAI 40


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