BLASTX nr result
ID: Gardenia21_contig00030490
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00030490
(613 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP00699.1| unnamed protein product [Coffea canephora] 298 2e-78
ref|XP_011070743.1| PREDICTED: nuclear poly(A) polymerase 1 isof... 79 2e-12
ref|XP_011070741.1| PREDICTED: nuclear poly(A) polymerase 1 isof... 79 2e-12
ref|XP_010662635.1| PREDICTED: nuclear poly(A) polymerase 1-like... 77 1e-11
ref|XP_010662582.1| PREDICTED: nuclear poly(A) polymerase 1-like... 77 1e-11
emb|CBI26953.3| unnamed protein product [Vitis vinifera] 77 1e-11
ref|XP_009774205.1| PREDICTED: poly(A) polymerase type 3 [Nicoti... 68 3e-09
ref|XP_009607410.1| PREDICTED: poly(A) polymerase type 3 [Nicoti... 63 1e-07
ref|XP_006344187.1| PREDICTED: poly(A) polymerase-like [Solanum ... 60 7e-07
ref|XP_004238881.1| PREDICTED: poly(A) polymerase type 3 [Solanu... 60 1e-06
>emb|CDP00699.1| unnamed protein product [Coffea canephora]
Length = 677
Score = 298 bits (762), Expect = 2e-78
Identities = 150/204 (73%), Positives = 163/204 (79%)
Frame = -2
Query: 612 MWIKVCHVRRKNIPVFVFSGGIRPCQQAKVAAQGCLGKRLPGNNFLHADDAVSRKRRKQA 433
MWI VCHVRRKNIPVFVFSGGIRP Q+AKVAAQ CLGKRLPGNNFLHADDA SRKRRKQ
Sbjct: 465 MWINVCHVRRKNIPVFVFSGGIRPSQRAKVAAQDCLGKRLPGNNFLHADDAGSRKRRKQV 524
Query: 432 VVNHGIHXXXXXXXXXXXXXXXLQIEAGQEERSEADIANTTRNTNYCKNMTSSDQEPEGS 253
VVN G+H LQIEAG+EE+SEA IA+T RN NY KNMT+ DQEPEGS
Sbjct: 525 VVNRGVHLEEFSSLTSGTSTASLQIEAGEEEQSEAVIADTIRNKNYRKNMTNHDQEPEGS 584
Query: 252 INCKSPLCSNPKGAPPMEKCVADSSSEEIVGLSDMKTEVSGGTAGSNSFQLSTMKQGVQT 73
+ C+SP CSNPKGA P+EK V DSSS EIVGLSDMKTEVSGGT +NSFQLS +QGVQ
Sbjct: 585 VKCRSPSCSNPKGASPVEKWVTDSSSGEIVGLSDMKTEVSGGTVENNSFQLSMTEQGVQI 644
Query: 72 PTIGAGGHSSCSKFPQNEGWEELE 1
P +GAGG +SCSK PQNEG EELE
Sbjct: 645 PVVGAGGRNSCSKSPQNEGLEELE 668
>ref|XP_011070743.1| PREDICTED: nuclear poly(A) polymerase 1 isoform X2 [Sesamum indicum]
Length = 694
Score = 79.0 bits (193), Expect = 2e-12
Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 1/205 (0%)
Frame = -2
Query: 612 MWIKVCHVRRKNIPVFVFSGGIRPCQQAKVAAQGCLGKRLPGNNFLHADDAVSRKRRKQA 433
MWI VCHV+RK+IP FVF GG+RP + AA ++ +N A+ +SRK+RK
Sbjct: 470 MWINVCHVKRKDIPNFVFPGGVRPPPPPRTAADSRSVRKSLRSNSPQAEAVMSRKKRKLD 529
Query: 432 VVNHGIHXXXXXXXXXXXXXXXLQIEAGQEERSEADIANTTRNTNYCKNMTSSDQEPEGS 253
+N G+ E ++ D N T N + +N++S E G
Sbjct: 530 EINRGVSLTESSSTGVCISDATSLDETMGRKQIGPDF-NATANGGFSENISSDGPEIPGF 588
Query: 252 INCKSPLCSNPKGAPPMEKCVADSSSEEIVGLSDMKTE-VSGGTAGSNSFQLSTMKQGVQ 76
K G P SSSE + S+++ + + G S+SF T +Q V
Sbjct: 589 GKSKH------DGVP-------TSSSEGVQVKSEIQQDGEADGIKPSSSF---TSEQAV- 631
Query: 75 TPTIGAGGHSSCSKFPQNEGWEELE 1
+GAG ++CSK QN EELE
Sbjct: 632 -GVVGAGNEATCSKIQQNGDLEELE 655
>ref|XP_011070741.1| PREDICTED: nuclear poly(A) polymerase 1 isoform X1 [Sesamum indicum]
gi|747049394|ref|XP_011070742.1| PREDICTED: nuclear
poly(A) polymerase 1 isoform X1 [Sesamum indicum]
Length = 729
Score = 79.0 bits (193), Expect = 2e-12
Identities = 64/222 (28%), Positives = 97/222 (43%), Gaps = 18/222 (8%)
Frame = -2
Query: 612 MWIKVCHVRRKNIPVFVFSGGIRPCQQAKVAAQGCLGKRLPGNNFLHADDAVSRKRRKQA 433
MWI VCHV+RK+IP FVF GG+RP + AA ++ +N A+ +SRK+RK
Sbjct: 470 MWINVCHVKRKDIPNFVFPGGVRPPPPPRTAADSRSVRKSLRSNSPQAEAVMSRKKRKLD 529
Query: 432 VVNHGIHXXXXXXXXXXXXXXXLQIEAGQEERSEADIANTTRNTNYCKNMTSSDQEPEGS 253
+N G+ E ++ D N T N + +N++S E G
Sbjct: 530 EINRGVSLTESSSTGVCISDATSLDETMGRKQIGPDF-NATANGGFSENISSDGPEIPGF 588
Query: 252 INCKS---PLCSNP--KGAPPMEKCVADSSSEEIV---GLSDMKTEVSGGTAGSNSFQLS 97
K P S+ G+ MEK + S +I+ G S++ + G + Q
Sbjct: 589 GKSKHDGVPTSSSGALSGSLTMEKPFTEHYSSQIINPQGPSEVLDGLVEGVQVKSEIQQD 648
Query: 96 TMKQGVQTPT----------IGAGGHSSCSKFPQNEGWEELE 1
G++ + +GAG ++CSK QN EELE
Sbjct: 649 GEADGIKPSSSFTSEQAVGVVGAGNEATCSKIQQNGDLEELE 690
>ref|XP_010662635.1| PREDICTED: nuclear poly(A) polymerase 1-like isoform X2 [Vitis
vinifera]
Length = 678
Score = 76.6 bits (187), Expect = 1e-11
Identities = 69/222 (31%), Positives = 96/222 (43%), Gaps = 18/222 (8%)
Frame = -2
Query: 612 MWIKVCHVRRKNIPVFVFSGGIRPCQQAKVAA-QGCLGKRLPGNNFLHADDAVSRKRRKQ 436
MWI VCH+RRKNIP FVF GG+RP Q KVA QG + K + N+ ++RK+
Sbjct: 432 MWIHVCHIRRKNIPNFVFPGGVRPPQPMKVAGEQGQVSKPMGFNS----------QKRKR 481
Query: 435 AVVNHGIH-XXXXXXXXXXXXXXXLQIEAGQEERSEADIANTTRNTNYCKNMTSSDQEPE 259
++ G H +++ Q E + D + T+ +N + + E E
Sbjct: 482 DEIDAGSHPRESTSLVENVESDLQGEVKLEQVEVNVGD--SLTKVICSSENSSHNSIELE 539
Query: 258 GSINCKSPL--CSNPKGA--------------PPMEKCVADSSSEEIVGLSDMKTEVSGG 127
G C PL S+ G+ P + +C + E VGL D G
Sbjct: 540 GYARCSQPLGAASSASGSLSLGRALVIETTSEPLVHQCSSKEVGESQVGLVDQVQNFDVG 599
Query: 126 TAGSNSFQLSTMKQGVQTPTIGAGGHSSCSKFPQNEGWEELE 1
N Q ST ++G+ G G S CS QN G EELE
Sbjct: 600 KR-VNCVQSSTAERGMAAAAAGQ-GFSPCSSLFQNGGLEELE 639
>ref|XP_010662582.1| PREDICTED: nuclear poly(A) polymerase 1-like isoform X1 [Vitis
vinifera]
Length = 716
Score = 76.6 bits (187), Expect = 1e-11
Identities = 69/222 (31%), Positives = 96/222 (43%), Gaps = 18/222 (8%)
Frame = -2
Query: 612 MWIKVCHVRRKNIPVFVFSGGIRPCQQAKVAA-QGCLGKRLPGNNFLHADDAVSRKRRKQ 436
MWI VCH+RRKNIP FVF GG+RP Q KVA QG + K + N+ ++RK+
Sbjct: 470 MWIHVCHIRRKNIPNFVFPGGVRPPQPMKVAGEQGQVSKPMGFNS----------QKRKR 519
Query: 435 AVVNHGIH-XXXXXXXXXXXXXXXLQIEAGQEERSEADIANTTRNTNYCKNMTSSDQEPE 259
++ G H +++ Q E + D + T+ +N + + E E
Sbjct: 520 DEIDAGSHPRESTSLVENVESDLQGEVKLEQVEVNVGD--SLTKVICSSENSSHNSIELE 577
Query: 258 GSINCKSPL--CSNPKGA--------------PPMEKCVADSSSEEIVGLSDMKTEVSGG 127
G C PL S+ G+ P + +C + E VGL D G
Sbjct: 578 GYARCSQPLGAASSASGSLSLGRALVIETTSEPLVHQCSSKEVGESQVGLVDQVQNFDVG 637
Query: 126 TAGSNSFQLSTMKQGVQTPTIGAGGHSSCSKFPQNEGWEELE 1
N Q ST ++G+ G G S CS QN G EELE
Sbjct: 638 KR-VNCVQSSTAERGMAAAAAGQ-GFSPCSSLFQNGGLEELE 677
>emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 76.6 bits (187), Expect = 1e-11
Identities = 69/222 (31%), Positives = 96/222 (43%), Gaps = 18/222 (8%)
Frame = -2
Query: 612 MWIKVCHVRRKNIPVFVFSGGIRPCQQAKVAA-QGCLGKRLPGNNFLHADDAVSRKRRKQ 436
MWI VCH+RRKNIP FVF GG+RP Q KVA QG + K + N+ ++RK+
Sbjct: 470 MWIHVCHIRRKNIPNFVFPGGVRPPQPMKVAGEQGQVSKPMGFNS----------QKRKR 519
Query: 435 AVVNHGIH-XXXXXXXXXXXXXXXLQIEAGQEERSEADIANTTRNTNYCKNMTSSDQEPE 259
++ G H +++ Q E + D + T+ +N + + E E
Sbjct: 520 DEIDAGSHPRESTSLVENVESDLQGEVKLEQVEVNVGD--SLTKVICSSENSSHNSIELE 577
Query: 258 GSINCKSPL--CSNPKGA--------------PPMEKCVADSSSEEIVGLSDMKTEVSGG 127
G C PL S+ G+ P + +C + E VGL D G
Sbjct: 578 GYARCSQPLGAASSASGSLSLGRALVIETTSEPLVHQCSSKEVGESQVGLVDQVQNFDVG 637
Query: 126 TAGSNSFQLSTMKQGVQTPTIGAGGHSSCSKFPQNEGWEELE 1
N Q ST ++G+ G G S CS QN G EELE
Sbjct: 638 KR-VNCVQSSTAERGMAAAAAGQ-GFSPCSSLFQNGGLEELE 677
>ref|XP_009774205.1| PREDICTED: poly(A) polymerase type 3 [Nicotiana sylvestris]
Length = 706
Score = 68.2 bits (165), Expect = 3e-09
Identities = 70/224 (31%), Positives = 92/224 (41%), Gaps = 20/224 (8%)
Frame = -2
Query: 612 MWIKVCHVRRKNIPVFVFSGGIRPCQQAKVAAQGCLGKRLPGNNFLHADDAVSRKRRKQA 433
MWI VCHVRRK++P FVF GG+RP Q A+ ++ + K L D A SRK RK
Sbjct: 460 MWIHVCHVRRKDLPNFVFPGGVRPAQPARSESRS-VSKSLGSAKATSVDAAFSRK-RKHD 517
Query: 432 VVNHGIHXXXXXXXXXXXXXXXLQIEAGQEERSEADIANTTRNTNYCKNMTSSDQEPEGS 253
VN G E + +R EADI +T + N
Sbjct: 518 EVNTGFTSKESCLAMSSSDASSPG-ETRELKRFEADIGDTLNSGGLVDNQI--------D 568
Query: 252 INCKSPLCSNPKGAPPMEKCVADSSSEEIVG---------LSDMKTEVSGGTA---GSNS 109
++ KS L GA E S+E VG + EV+ G G+N
Sbjct: 569 VSVKSTLPVPSSGAAVTETIAVKQSAEPTVGHQSGSHGFEAPGDELEVTNGVKHFDGANE 628
Query: 108 FQLS--TMKQGVQTPT------IGAGGHSSCSKFPQNEGWEELE 1
Q+ T ++ V+ T IG H K Q+EG EELE
Sbjct: 629 LQMEPPTAEEMVEATTSEEKDRIGGSSH----KVLQSEGLEELE 668
>ref|XP_009607410.1| PREDICTED: poly(A) polymerase type 3 [Nicotiana tomentosiformis]
gi|697094661|ref|XP_009607414.1| PREDICTED: poly(A)
polymerase type 3 [Nicotiana tomentosiformis]
Length = 706
Score = 63.2 bits (152), Expect = 1e-07
Identities = 68/224 (30%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Frame = -2
Query: 612 MWIKVCHVRRKNIPVFVFSGGIRPCQQAKVAAQGCLGKRLPGNNFLHADDAVSRKRRKQA 433
MWI VCHVRRK++P FVF GG+RP Q A+ ++ + K L D A SRK RK
Sbjct: 460 MWIHVCHVRRKDLPNFVFPGGVRPAQPARSESRS-VSKSLGSAKATSVDAAFSRK-RKHD 517
Query: 432 VVNHGIHXXXXXXXXXXXXXXXLQIEAGQEERSEADIANTTRNTNYCKNMTSSDQEPEGS 253
VN G E + +R EADI +T + N
Sbjct: 518 EVNTGFTSKESCLAMSSSDASSPG-ETRELKRFEADIGDTLNSGGLVDNQI--------E 568
Query: 252 INCKSPLCSNPKGAPPMEKCVADSSSEEIVGLSD---------MKTEVSGGTA---GSNS 109
++ KS L A E S+E VG + E++ G G+N
Sbjct: 569 VSVKSMLPVPSSCAAVTETIAVKQSAEPTVGHQSGSHGFEDPGDELELTNGVKHFDGANE 628
Query: 108 FQLS--TMKQGVQTPT------IGAGGHSSCSKFPQNEGWEELE 1
Q+ T ++ V+ T IG H K Q+EG EELE
Sbjct: 629 LQMEPPTAEEMVEATTSEEKDRIGGSSH----KVLQSEGLEELE 668
>ref|XP_006344187.1| PREDICTED: poly(A) polymerase-like [Solanum tuberosum]
Length = 695
Score = 60.5 bits (145), Expect = 7e-07
Identities = 39/104 (37%), Positives = 54/104 (51%)
Frame = -2
Query: 612 MWIKVCHVRRKNIPVFVFSGGIRPCQQAKVAAQGCLGKRLPGNNFLHADDAVSRKRRKQA 433
M I VCHVRRK++P FVFSGG+RP Q AK ++ G R G+ + DA S ++RK
Sbjct: 460 MGIHVCHVRRKDLPDFVFSGGVRPAQPAKSESRS--GSRSLGSAKTTSPDAASSRKRKHD 517
Query: 432 VVNHGIHXXXXXXXXXXXXXXXLQIEAGQEERSEADIANTTRNT 301
VN G E+ + +R +ADI +T+ T
Sbjct: 518 EVNTGFSPKGSDASSPG--------ESRELKRFDADIGDTSSTT 553
>ref|XP_004238881.1| PREDICTED: poly(A) polymerase type 3 [Solanum lycopersicum]
Length = 682
Score = 59.7 bits (143), Expect = 1e-06
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = -2
Query: 612 MWIKVCHVRRKNIPVFVFSGGIRPCQQAKVAAQGCLGKRLPGNNFLHADDAVSRKRRKQA 433
MWI VCHVRRK++P FVF GG+RP Q AK ++ G R G+ + DA S ++RK
Sbjct: 460 MWINVCHVRRKDLPDFVFPGGVRPAQPAKSESRS--GSRSLGSAKTTSPDAASSRKRKHD 517
Query: 432 VVNHGI 415
V G+
Sbjct: 518 EVVAGL 523