BLASTX nr result

ID: Gardenia21_contig00030252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00030252
         (395 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP16284.1| unnamed protein product [Coffea canephora]            119   9e-25
emb|CDP16289.1| unnamed protein product [Coffea canephora]             87   4e-15
ref|XP_010088193.1| hypothetical protein L484_005539 [Morus nota...    61   4e-07
ref|XP_012467190.1| PREDICTED: pentatricopeptide repeat-containi...    61   4e-07
ref|XP_007045272.1| Tetratricopeptide repeat (TPR)-like superfam...    59   1e-06
ref|XP_010513901.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06
ref|XP_010275860.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06

>emb|CDP16284.1| unnamed protein product [Coffea canephora]
          Length = 558

 Score =  119 bits (298), Expect = 9e-25
 Identities = 56/59 (94%), Positives = 57/59 (96%)
 Frame = -2

Query: 199 MTKESLKFFAYSLQRFKASRKFPDRHDFNKSLHSLTRSNCGDLSLKLLVTFISKGYFPH 23
           MTKE+LKFFAY LQRFKASRKFPDRHDFNKSLHSLTRSNCGDLSLKLLV FISKGYFPH
Sbjct: 1   MTKEALKFFAYGLQRFKASRKFPDRHDFNKSLHSLTRSNCGDLSLKLLVAFISKGYFPH 59


>emb|CDP16289.1| unnamed protein product [Coffea canephora]
          Length = 65

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 46/56 (82%), Positives = 47/56 (83%), Gaps = 2/56 (3%)
 Frame = -2

Query: 199 MTKESLKFFAY--SLQRFKASRKFPDRHDFNKSLHSLTRSNCGDLSLKLLVTFISK 38
           MTKE+LKFFAY  SLQRFKASRKFPD HDFN SLHSLTRSN GDLSLKLLV    K
Sbjct: 1   MTKEALKFFAYTYSLQRFKASRKFPDHHDFNMSLHSLTRSNYGDLSLKLLVILYFK 56


>ref|XP_010088193.1| hypothetical protein L484_005539 [Morus notabilis]
           gi|587841736|gb|EXB32333.1| hypothetical protein
           L484_005539 [Morus notabilis]
          Length = 548

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 29/59 (49%), Positives = 40/59 (67%)
 Frame = -2

Query: 199 MTKESLKFFAYSLQRFKASRKFPDRHDFNKSLHSLTRSNCGDLSLKLLVTFISKGYFPH 23
           M +E+L+FFA+     + + +FP    FNK LH LT +NCGDLSLK+L  F++K Y PH
Sbjct: 1   MVRETLQFFAH----LRRTSRFPTPFTFNKLLHHLTSANCGDLSLKILSHFLTKRYVPH 55


>ref|XP_012467190.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
           [Gossypium raimondii] gi|823134781|ref|XP_012467191.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740 [Gossypium raimondii]
           gi|763747904|gb|KJB15343.1| hypothetical protein
           B456_002G171900 [Gossypium raimondii]
           gi|763747905|gb|KJB15344.1| hypothetical protein
           B456_002G171900 [Gossypium raimondii]
          Length = 583

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
 Frame = -2

Query: 178 FFAYSLQRF---KASRKFPDRHDFNKSLHSLTRSNCGDLSLKLLVTFISKGYFPH 23
           +F   LQ F   K + K+PD + FNK LH LT S+CG LSLKLL  F+SKGY PH
Sbjct: 35  YFGSPLQFFSDLKKTSKYPDPYSFNKLLHKLTASDCGALSLKLLSFFLSKGYTPH 89


>ref|XP_007045272.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508709207|gb|EOY01104.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 597

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = -2

Query: 157 RFKASRKFPDRHDFNKSLHSLTRSNCGDLSLKLLVTFISKGYFPH 23
           + K + K+PD   FNK LH LT SNCG LSLKLL  F+SKGY PH
Sbjct: 48  QLKKTSKYPDPFFFNKLLHRLTASNCGTLSLKLLSFFLSKGYTPH 92


>ref|XP_010513901.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
           [Camelina sativa]
          Length = 559

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 29/59 (49%), Positives = 36/59 (61%)
 Frame = -2

Query: 199 MTKESLKFFAYSLQRFKASRKFPDRHDFNKSLHSLTRSNCGDLSLKLLVTFISKGYFPH 23
           M +E+L+F    L R + S  FPD    NK +H L  SNCG LSLKLL   +S+GY PH
Sbjct: 1   MVREALQF----LSRLRKSSNFPDPFTCNKHIHQLINSNCGVLSLKLLAYLVSRGYTPH 55


>ref|XP_010275860.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01740
           [Nelumbo nucifera] gi|720064141|ref|XP_010275861.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740 [Nelumbo nucifera]
           gi|720064145|ref|XP_010275862.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g01740
           [Nelumbo nucifera]
          Length = 546

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 28/59 (47%), Positives = 38/59 (64%)
 Frame = -2

Query: 199 MTKESLKFFAYSLQRFKASRKFPDRHDFNKSLHSLTRSNCGDLSLKLLVTFISKGYFPH 23
           MT++ L+FF+      + + +FPD    NK LH +  SNCGDLSLK+L   IS+GY PH
Sbjct: 1   MTRKVLEFFS----GLRRNARFPDSWTCNKLLHQIITSNCGDLSLKILFDMISRGYTPH 55


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