BLASTX nr result
ID: Gardenia21_contig00030118
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00030118
(349 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB70556.1| chlorophyll a/b binding protein [Tetraselmis sp. ... 194 2e-47
ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa s... 191 2e-46
ref|XP_011397368.1| Chlorophyll a-b binding protein of LHCII typ... 187 2e-45
ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa s... 187 3e-45
ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa s... 187 3e-45
gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2.... 186 6e-45
sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding prot... 186 8e-45
gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2.... 186 8e-45
ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvo... 185 1e-44
ref|XP_005843949.1| hypothetical protein CHLNCDRAFT_59790 [Chlor... 184 2e-44
tpg|DAA05914.1| TPA_inf: chloroplast light-harvesting complex II... 183 4e-44
gb|AAC79711.1| chlorophyll a/b binding protein [Acetabularia ace... 183 5e-44
ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volv... 183 5e-44
ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding pro... 183 5e-44
ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvo... 183 5e-44
ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvo... 182 1e-43
ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type... 181 2e-43
gb|ABD37899.1| light-harvesting chlorophyll-a/b binding protein ... 181 2e-43
sp|P14273.1|CB2_CHLRE RecName: Full=Chlorophyll a-b binding prot... 180 4e-43
gb|AAD03731.1| light harvesting complex II protein precursor [Ch... 180 4e-43
>gb|AAB70556.1| chlorophyll a/b binding protein [Tetraselmis sp. RG-15]
Length = 251
Score = 194 bits (494), Expect = 2e-47
Identities = 89/112 (79%), Positives = 102/112 (91%)
Frame = -2
Query: 336 KGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRYR 157
+G KQVTRAAVEFYGP+RAKWLGPFSD+ TP YLTGEF GDYGWDTAGLSADPETF+ YR
Sbjct: 22 RGQKQVTRAAVEFYGPDRAKWLGPFSDD-TPSYLTGEFPGDYGWDTAGLSADPETFASYR 80
Query: 156 ELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
ELELIHARWAMLGALGCVTPELL++Y+G++F E +WFK+GA IF+ GL+YL
Sbjct: 81 ELELIHARWAMLGALGCVTPELLSKYAGVEFGEAVWFKAGAQIFADGGLDYL 132
>ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384253398|gb|EIE26873.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 250
Score = 191 bits (484), Expect = 2e-46
Identities = 89/116 (76%), Positives = 102/116 (87%)
Frame = -2
Query: 348 PTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETF 169
PT GKG +QVTRAA+EFYGP+RA +LGPF+D TP YL GEF GDYGWDTAGLSADPETF
Sbjct: 20 PTAGKGNRQVTRAAIEFYGPDRATFLGPFTD--TPSYLNGEFPGDYGWDTAGLSADPETF 77
Query: 168 SRYRELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
+RYRE+E+IHARWAMLGALGCVTPELLA+ +G+ F E +WFK+GA IF SDGLNYL
Sbjct: 78 ARYREIEVIHARWAMLGALGCVTPELLAK-NGVSFGEAVWFKAGAQIFGSDGLNYL 132
>ref|XP_011397368.1| Chlorophyll a-b binding protein of LHCII type I, chloroplastic
[Auxenochlorella protothecoides]
gi|675352040|gb|KFM24480.1| Chlorophyll a-b binding
protein of LHCII type I, chloroplastic [Auxenochlorella
protothecoides]
Length = 250
Score = 187 bits (476), Expect = 2e-45
Identities = 84/116 (72%), Positives = 97/116 (83%)
Frame = -2
Query: 348 PTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETF 169
PT G+GT+QVTRAA EFYGP R KWLGPFS ++TPDYL GE+ GDYGWDTAGLSADPETF
Sbjct: 18 PTAGRGTRQVTRAAAEFYGPNRVKWLGPFSGDSTPDYLKGEYPGDYGWDTAGLSADPETF 77
Query: 168 SRYRELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
+RYRELE+IHARWA+LGALG +TPELL R F E +WFK+G+ IF S GL+YL
Sbjct: 78 ARYRELEVIHARWALLGALGIITPELLERNGAASFGEAVWFKAGSQIFQSGGLDYL 133
>ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384252962|gb|EIE26437.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 187 bits (475), Expect = 3e-45
Identities = 87/116 (75%), Positives = 103/116 (88%)
Frame = -2
Query: 348 PTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETF 169
PT+G+G KQVTRAA+EFYGP+RA +LGPF+++ P YL GEF GDYGWDTAGLSADPETF
Sbjct: 15 PTKGQGNKQVTRAAIEFYGPDRAGFLGPFTES--PSYLKGEFPGDYGWDTAGLSADPETF 72
Query: 168 SRYRELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
+RYRE+E+IHARWAMLGALGCVTPELLA+ +G+ F E +WFK+GA IF SDGLNYL
Sbjct: 73 ARYREIEVIHARWAMLGALGCVTPELLAK-NGVSFGEAVWFKAGAQIFGSDGLNYL 127
>ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384246503|gb|EIE19993.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 254
Score = 187 bits (474), Expect = 3e-45
Identities = 82/109 (75%), Positives = 98/109 (89%)
Frame = -2
Query: 327 KQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRYRELE 148
KQVTRA++E+YGP+R K+LGP+SD ATP YL GE+ GDYGWDTAGLSADPETFSRYRE+E
Sbjct: 26 KQVTRASIEWYGPDRPKFLGPYSDGATPSYLKGEYPGDYGWDTAGLSADPETFSRYREIE 85
Query: 147 LIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
+IH+RWA+LG LG VTPELL +Y G+KFQE +WFK+GA IFS+DGLNYL
Sbjct: 86 VIHSRWALLGTLGIVTPELLEKYGGVKFQEAVWFKAGAQIFSADGLNYL 134
>gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina] gi|90191875|gb|ABD91649.1| major
light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina]
Length = 253
Score = 186 bits (472), Expect = 6e-45
Identities = 82/107 (76%), Positives = 100/107 (93%)
Frame = -2
Query: 321 VTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRYRELELI 142
V RAAVEFYGP+RAK+LGPFS+N TP+YLTGEF GDYGWDTAGLSADP+TF+RYRE+ELI
Sbjct: 26 VPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELI 85
Query: 141 HARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
HARWA+LGALG +TPELL++Y+G++F EP+WFK+GA IF++ GLNYL
Sbjct: 86 HARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFAAGGLNYL 132
>sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167985|gb|AAA62772.1| 28.5 kDa LHCII apoprotein
[Dunaliella tertiolecta]
Length = 253
Score = 186 bits (471), Expect = 8e-45
Identities = 82/107 (76%), Positives = 99/107 (92%)
Frame = -2
Query: 321 VTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRYRELELI 142
V RAAVEFYGP+RAK+LGPFS+N TP+YLTGEF GDYGWDTAGLSADP+TF+RYRE+ELI
Sbjct: 26 VPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELI 85
Query: 141 HARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
HARWA+LGALG +TPELL++Y+G++F EP+WFK+GA IF+ GLNYL
Sbjct: 86 HARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYL 132
>gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina] gi|90191873|gb|ABD91648.1| major
light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina]
Length = 253
Score = 186 bits (471), Expect = 8e-45
Identities = 82/107 (76%), Positives = 99/107 (92%)
Frame = -2
Query: 321 VTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRYRELELI 142
V RAAVEFYGP+RAK+LGPFS+N TP+YLTGEF GDYGWDTAGLSADP+TF+RYRE+ELI
Sbjct: 26 VPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELI 85
Query: 141 HARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
HARWA+LGALG +TPELL++Y+G++F EP+WFK+GA IF+ GLNYL
Sbjct: 86 HARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYL 132
>ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis] gi|300265820|gb|EFJ50010.1| hypothetical
protein VOLCADRAFT_80470 [Volvox carteri f. nagariensis]
Length = 252
Score = 185 bits (469), Expect = 1e-44
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = -2
Query: 348 PTQGKGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETF 169
P + + V RAA+E+YGP+R K+LGPFS+ TP YLTGEF GDYGWDTAGLSADPETF
Sbjct: 18 PVGSRAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETF 77
Query: 168 SRYRELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
RYRELELIHARWAMLGALGCVTPELL++Y+G+ F E +WFK+GA IF+ GLNYL
Sbjct: 78 KRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYL 133
>ref|XP_005843949.1| hypothetical protein CHLNCDRAFT_59790 [Chlorella variabilis]
gi|307103588|gb|EFN51847.1| hypothetical protein
CHLNCDRAFT_59790 [Chlorella variabilis]
Length = 251
Score = 184 bits (467), Expect = 2e-44
Identities = 84/113 (74%), Positives = 97/113 (85%), Gaps = 1/113 (0%)
Frame = -2
Query: 336 KGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRYR 157
+G++QVTRA+VEFYGP+RAKWLGPFSD A P YL GEF GDYGWD+AGLSADPETF+RYR
Sbjct: 19 RGSRQVTRASVEFYGPDRAKWLGPFSDGAVPSYLKGEFPGDYGWDSAGLSADPETFARYR 78
Query: 156 ELELIHARWAMLGALGCVTPELLARYSGIKFQE-PIWFKSGAAIFSSDGLNYL 1
E+E+IHARWAMLGALGC+TPELL F E +WFK+GA+IFS DGLNYL
Sbjct: 79 EIEVIHARWAMLGALGCLTPELLQNNGAADFGEAAVWFKAGASIFSDDGLNYL 131
>tpg|DAA05914.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Acetabularia acetabulum]
Length = 248
Score = 183 bits (465), Expect = 4e-44
Identities = 84/116 (72%), Positives = 97/116 (83%), Gaps = 1/116 (0%)
Frame = -2
Query: 345 TQGKGTKQVT-RAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETF 169
T KG K+V+ +AAVE+YGP+RAKWLGP+SD A P YLTGEF GDYGWDTAGLSADPETF
Sbjct: 14 TLPKGNKRVSVQAAVEWYGPDRAKWLGPYSDGAVPSYLTGEFPGDYGWDTAGLSADPETF 73
Query: 168 SRYRELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
+YRE ELIHARWAMLGALGCVTPE+LA+Y G F E +WF++GA IF GL+YL
Sbjct: 74 KKYRETELIHARWAMLGALGCVTPEILAKYGGTSFGESVWFRAGAQIFKDGGLDYL 129
>gb|AAC79711.1| chlorophyll a/b binding protein [Acetabularia acetabulum]
Length = 251
Score = 183 bits (464), Expect = 5e-44
Identities = 83/113 (73%), Positives = 96/113 (84%), Gaps = 1/113 (0%)
Frame = -2
Query: 336 KGTKQVT-RAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRY 160
KG K+V+ +AAVE+YGP+RAKWLGP+SD A P YLTGEF GDYGWDTAGLSADPETF +Y
Sbjct: 20 KGNKRVSVQAAVEWYGPDRAKWLGPYSDGAVPSYLTGEFPGDYGWDTAGLSADPETFKKY 79
Query: 159 RELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
RE ELIHARWAMLGALGCVTPE+LA+Y G F E +WF++GA IF GL+YL
Sbjct: 80 RETELIHARWAMLGALGCVTPEILAKYGGTSFGESVWFRAGAQIFKDGGLDYL 132
>ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis] gi|300263246|gb|EFJ47448.1| hypothetical
protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
Length = 251
Score = 183 bits (464), Expect = 5e-44
Identities = 82/112 (73%), Positives = 96/112 (85%)
Frame = -2
Query: 336 KGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRYR 157
+ + V RAA+E+YGP+R K+LGPFS+ TP YLTGEF GDYGWDTAGLSADPETF RYR
Sbjct: 21 RAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYR 80
Query: 156 ELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
ELELIHARWAMLGALGCVTPELL++Y+G+ F E +WFK+GA IF+ GLNYL
Sbjct: 81 ELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYL 132
>ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis] gi|300262048|gb|EFJ46257.1|
light-harvesting chlorophyll a/b-binding protein [Volvox
carteri f. nagariensis]
Length = 251
Score = 183 bits (464), Expect = 5e-44
Identities = 82/112 (73%), Positives = 96/112 (85%)
Frame = -2
Query: 336 KGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRYR 157
+ + V RAA+E+YGP+R K+LGPFS+ TP YLTGEF GDYGWDTAGLSADPETF RYR
Sbjct: 21 RAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYR 80
Query: 156 ELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
ELELIHARWAMLGALGCVTPELL++Y+G+ F E +WFK+GA IF+ GLNYL
Sbjct: 81 ELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYL 132
>ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
nagariensis] gi|300261970|gb|EFJ46179.1| hypothetical
protein VOLCADRAFT_81918 [Volvox carteri f. nagariensis]
Length = 251
Score = 183 bits (464), Expect = 5e-44
Identities = 82/112 (73%), Positives = 96/112 (85%)
Frame = -2
Query: 336 KGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRYR 157
+ + V RAA+E+YGP+R K+LGPFS+ TP YLTGEF GDYGWDTAGLSADPETF RYR
Sbjct: 21 RAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYR 80
Query: 156 ELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
ELELIHARWAMLGALGCVTPELL++Y+G+ F E +WFK+GA IF+ GLNYL
Sbjct: 81 ELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYL 132
>ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
nagariensis] gi|300258258|gb|EFJ42496.1| hypothetical
protein VOLCADRAFT_77072 [Volvox carteri f. nagariensis]
Length = 250
Score = 182 bits (461), Expect = 1e-43
Identities = 81/112 (72%), Positives = 95/112 (84%)
Frame = -2
Query: 336 KGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRYR 157
+ + V RAA+E+YGP+R K+LGPFS+ P YLTGEF GDYGWDTAGLSADPETF RYR
Sbjct: 20 RAARVVPRAAIEWYGPDRPKFLGPFSEGDVPSYLTGEFPGDYGWDTAGLSADPETFKRYR 79
Query: 156 ELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
ELELIHARWAMLGALGCVTPELL++Y+G+ F E +WFK+GA IF+ GLNYL
Sbjct: 80 ELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYL 131
>ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type I, chloroplast
precursor [Chlamydomonas reinhardtii]
gi|158275836|gb|EDP01611.1| chloropyll a-b binding
protein of LHCII type I, chloroplast precursor
[Chlamydomonas reinhardtii]
Length = 253
Score = 181 bits (459), Expect = 2e-43
Identities = 88/117 (75%), Positives = 96/117 (82%), Gaps = 6/117 (5%)
Frame = -2
Query: 333 GTKQVTRAA------VEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPET 172
G K +AA VEFYGP RAKWLGP+S+NATP YLTGEF GDYGWDTAGLSADPET
Sbjct: 19 GKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPET 78
Query: 171 FSRYRELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
F RYRELELIHARWAMLGALGC+TPELLA+ SG KF E +WFK+GA IFS GL+YL
Sbjct: 79 FKRYRELELIHARWAMLGALGCLTPELLAK-SGTKFGEAVWFKAGAQIFSEGGLDYL 134
>gb|ABD37899.1| light-harvesting chlorophyll-a/b binding protein LhcbM2
[Acutodesmus obliquus]
Length = 249
Score = 181 bits (458), Expect = 2e-43
Identities = 81/112 (72%), Positives = 99/112 (88%)
Frame = -2
Query: 336 KGTKQVTRAAVEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPETFSRYR 157
+ T+QVTRAA+E+YGP+R K+LGPFS+ TP YLTGEFAGDYGWDTAGLSADP+TF++YR
Sbjct: 17 RATRQVTRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFAGDYGWDTAGLSADPQTFAKYR 76
Query: 156 ELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
E+E+IHARWAMLGALGC+TPELLA+ +G+ F E +WFK+GA IF GLNYL
Sbjct: 77 EIEVIHARWAMLGALGCITPELLAK-NGVPFGEAVWFKAGAQIFQDGGLNYL 127
>sp|P14273.1|CB2_CHLRE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|20269802|gb|AAM18056.1|AF495472_1 major
light-harvesting complex II protein m6 [Chlamydomonas
reinhardtii] gi|167409|gb|AAA33082.1| chlorophyll
a/b-binding protein [Chlamydomonas reinhardtii]
Length = 253
Score = 180 bits (456), Expect = 4e-43
Identities = 88/117 (75%), Positives = 95/117 (81%), Gaps = 6/117 (5%)
Frame = -2
Query: 333 GTKQVTRAA------VEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPET 172
G K +AA VEFYGP RAKWLGP+S+NATP YLTGEF GDYGWDTAGLSADPET
Sbjct: 19 GKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPET 78
Query: 171 FSRYRELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
F RYRELELIHARWAMLGALGC TPELLA+ SG KF E +WFK+GA IFS GL+YL
Sbjct: 79 FKRYRELELIHARWAMLGALGCQTPELLAK-SGTKFGEAVWFKAGAQIFSEGGLDYL 134
>gb|AAD03731.1| light harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
Length = 254
Score = 180 bits (456), Expect = 4e-43
Identities = 87/117 (74%), Positives = 96/117 (82%), Gaps = 6/117 (5%)
Frame = -2
Query: 333 GTKQVTRAA------VEFYGPERAKWLGPFSDNATPDYLTGEFAGDYGWDTAGLSADPET 172
G K +AA VEFYGP RAKWLGP+S+N+TP YLTGEF GDYGWDTAGLSADPET
Sbjct: 20 GKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPET 79
Query: 171 FSRYRELELIHARWAMLGALGCVTPELLARYSGIKFQEPIWFKSGAAIFSSDGLNYL 1
F RYRELELIHARWAMLGALGC+TPELLA+ SG KF E +WFK+GA IFS GL+YL
Sbjct: 80 FKRYRELELIHARWAMLGALGCLTPELLAK-SGTKFGEAVWFKAGAQIFSEGGLDYL 135