BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00030117
         (542 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011397368.1| Chlorophyll a-b binding protein of LHCII typ...   252   7e-65
ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa s...   252   9e-65
ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa s...   243   5e-62
ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa s...   240   3e-61
ref|XP_011398059.1| Chlorophyll a-b binding protein of LHCII typ...   238   1e-60
gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2....   237   3e-60
sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding prot...   236   4e-60
gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2....   236   4e-60
ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding pro...   235   8e-60
ref|XP_005651359.1| major light-harvesting complex II protein m1...   234   2e-59
ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvo...   233   3e-59
ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volv...   233   3e-59
ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvo...   232   7e-59
gb|AAB70556.1| chlorophyll a/b binding protein [Tetraselmis sp. ...   231   2e-58
ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvo...   231   2e-58
ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type...   229   8e-58
ref|XP_001695466.1| chlorophyll a-b binding protein of LHCII [Ch...   228   1e-57
gb|ABD37913.1| light-harvesting chlorophyll-a/b binding protein ...   227   3e-57
sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding prot...   226   4e-57
ref|XP_002957491.1| hypothetical protein VOLCADRAFT_84135 [Volvo...   226   5e-57

>ref|XP_011397368.1| Chlorophyll a-b binding protein of LHCII type I, chloroplastic
           [Auxenochlorella protothecoides]
           gi|675352040|gb|KFM24480.1| Chlorophyll a-b binding
           protein of LHCII type I, chloroplastic [Auxenochlorella
           protothecoides]
          Length = 250

 Score =  252 bits (644), Expect = 7e-65
 Identities = 116/159 (72%), Positives = 136/159 (85%)
 Frame = -3

Query: 477 AQKSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFAGDY 298
           A ++ +G+TLR   PT G+GTRQVTRAA EFYGP R KWLGPFS ++TPDYL GE+ GDY
Sbjct: 4   AMRATMGTTLRSAVPTAGRGTRQVTRAAAEFYGPNRVKWLGPFSGDSTPDYLKGEYPGDY 63

Query: 297 GWDTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKSGAA 118
           GWDTAGLSADPETF+RYRELE+IHARWA+LGALGI+TPELL + G   F E +WFK+G+ 
Sbjct: 64  GWDTAGLSADPETFARYRELEVIHARWALLGALGIITPELLERNGAASFGEAVWFKAGSQ 123

Query: 117 IFASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           IF S GL+YLGNPSLVHAQSI+ATL +QV+LMGLVEGYR
Sbjct: 124 IFQSGGLDYLGNPSLVHAQSIVATLISQVILMGLVEGYR 162


>ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
           gi|384246503|gb|EIE19993.1| chlorophyll a/b-binding
           protein [Coccomyxa subellipsoidea C-169]
          Length = 254

 Score =  252 bits (643), Expect = 9e-65
 Identities = 119/164 (72%), Positives = 142/164 (86%)
 Frame = -3

Query: 492 MTSALAQKSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGE 313
           M SAL   SF+ S  R V+  + KG +QVTRA++E+YGP+R K+LGP+S+ ATP YL GE
Sbjct: 1   MASALLSNSFVVSARRTVSSPKSKG-KQVTRASIEWYGPDRPKFLGPYSDGATPSYLKGE 59

Query: 312 FAGDYGWDTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWF 133
           + GDYGWDTAGLSADPETFSRYRE+E+IH+RWA+LG LGIVTPELL KYGGVKFQE +WF
Sbjct: 60  YPGDYGWDTAGLSADPETFSRYREIEVIHSRWALLGTLGIVTPELLEKYGGVKFQEAVWF 119

Query: 132 KSGAAIFASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           K+GA IF++DGLNYLGNPSLVHAQSIIAT+ATQV+L+GL EGYR
Sbjct: 120 KAGAQIFSADGLNYLGNPSLVHAQSIIATVATQVILLGLAEGYR 163


>ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
           gi|384253398|gb|EIE26873.1| chlorophyll a/b-binding
           protein [Coccomyxa subellipsoidea C-169]
          Length = 250

 Score =  243 bits (619), Expect = 5e-62
 Identities = 121/164 (73%), Positives = 135/164 (82%)
 Frame = -3

Query: 492 MTSALAQKSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGE 313
           M SAL   SF G++LR   PT GKG RQVTRAA+EFYGP+RA +LGPF++  TP YL GE
Sbjct: 1   MASALLCNSFAGASLRSAVPTAGKGNRQVTRAAIEFYGPDRATFLGPFTD--TPSYLNGE 58

Query: 312 FAGDYGWDTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWF 133
           F GDYGWDTAGLSADPETF+RYRE+E+IHARWAMLGALG VTPELL+K  GV F E +WF
Sbjct: 59  FPGDYGWDTAGLSADPETFARYREIEVIHARWAMLGALGCVTPELLAK-NGVSFGEAVWF 117

Query: 132 KSGAAIFASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           K+GA IF SDGLNYLGN SLVHAQSIIATLA QV+LMG  E YR
Sbjct: 118 KAGAQIFGSDGLNYLGNSSLVHAQSIIATLACQVILMGGAEAYR 161


>ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
           gi|384252962|gb|EIE26437.1| chlorophyll a/b-binding
           protein [Coccomyxa subellipsoidea C-169]
          Length = 245

 Score =  240 bits (612), Expect = 3e-61
 Identities = 117/157 (74%), Positives = 135/157 (85%)
 Frame = -3

Query: 471 KSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFAGDYGW 292
           +SFLG++LR   PT+G+G +QVTRAA+EFYGP+RA +LGPF+E+  P YL GEF GDYGW
Sbjct: 3   QSFLGASLRSAVPTKGQGNKQVTRAAIEFYGPDRAGFLGPFTES--PSYLKGEFPGDYGW 60

Query: 291 DTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKSGAAIF 112
           DTAGLSADPETF+RYRE+E+IHARWAMLGALG VTPELL+K  GV F E +WFK+GA IF
Sbjct: 61  DTAGLSADPETFARYREIEVIHARWAMLGALGCVTPELLAK-NGVSFGEAVWFKAGAQIF 119

Query: 111 ASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
            SDGLNYLGNPSLVHAQSIIATLA QV+LMG  E YR
Sbjct: 120 GSDGLNYLGNPSLVHAQSIIATLACQVILMGGAEAYR 156


>ref|XP_011398059.1| Chlorophyll a-b binding protein of LHCII type I, chloroplastic
           [Auxenochlorella protothecoides]
           gi|675352728|gb|KFM25168.1| Chlorophyll a-b binding
           protein of LHCII type I, chloroplastic [Auxenochlorella
           protothecoides]
          Length = 252

 Score =  238 bits (607), Expect = 1e-60
 Identities = 113/159 (71%), Positives = 131/159 (82%), Gaps = 2/159 (1%)
 Frame = -3

Query: 471 KSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFAGDYGW 292
           +SF+G+ +R V P  GKG RQVTRAAVEFYGP RAK+LGPFSE  TP YL GE+ GDYGW
Sbjct: 3   RSFVGTNIRQVVPKAGKGPRQVTRAAVEFYGPNRAKFLGPFSEGVTPSYLKGEYPGDYGW 62

Query: 291 DTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKF--QEPIWFKSGAA 118
           DTAGLSADP+TF+RYR++ELIH+RWA+LGALGI+ PELL + G V F     +WFK+G+ 
Sbjct: 63  DTAGLSADPQTFARYRDIELIHSRWALLGALGILVPELLQRNGAVAFPGDTSVWFKAGSG 122

Query: 117 IFASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           IF SDGLNYLGNPSLVHAQSI+ATLA QVVLMG  E YR
Sbjct: 123 IFGSDGLNYLGNPSLVHAQSIVATLAAQVVLMGGAEAYR 161


>gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
           salina] gi|90191875|gb|ABD91649.1| major
           light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
           salina]
          Length = 253

 Score =  237 bits (604), Expect = 3e-60
 Identities = 112/147 (76%), Positives = 129/147 (87%)
 Frame = -3

Query: 441 VAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFAGDYGWDTAGLSADPE 262
           +  T+ +    V RAAVEFYGP+RAK+LGPFSEN TP+YLTGEF GDYGWDTAGLSADP+
Sbjct: 15  IRQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQ 74

Query: 261 TFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKSGAAIFASDGLNYLGN 82
           TF+RYRE+ELIHARWA+LGALGI+TPELLS+Y GV+F EP+WFK+GA IFA+ GLNYLGN
Sbjct: 75  TFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFAAGGLNYLGN 134

Query: 81  PSLVHAQSIIATLATQVVLMGLVEGYR 1
            SL+HAQSIIATLA QVVLMGL E YR
Sbjct: 135 ESLIHAQSIIATLAVQVVLMGLAEAYR 161


>sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
           chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
           gi|167985|gb|AAA62772.1| 28.5 kDa LHCII apoprotein
           [Dunaliella tertiolecta]
          Length = 253

 Score =  236 bits (603), Expect = 4e-60
 Identities = 112/147 (76%), Positives = 128/147 (87%)
 Frame = -3

Query: 441 VAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFAGDYGWDTAGLSADPE 262
           +  T+ +    V RAAVEFYGP+RAK+LGPFSEN TP+YLTGEF GDYGWDTAGLSADP+
Sbjct: 15  IRQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQ 74

Query: 261 TFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKSGAAIFASDGLNYLGN 82
           TF+RYRE+ELIHARWA+LGALGI+TPELLS+Y GV+F EP+WFK+GA IFA  GLNYLGN
Sbjct: 75  TFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGN 134

Query: 81  PSLVHAQSIIATLATQVVLMGLVEGYR 1
            SL+HAQSIIATLA QVVLMGL E YR
Sbjct: 135 ESLIHAQSIIATLAVQVVLMGLAEAYR 161


>gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
           salina] gi|90191873|gb|ABD91648.1| major
           light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
           salina]
          Length = 253

 Score =  236 bits (603), Expect = 4e-60
 Identities = 112/147 (76%), Positives = 128/147 (87%)
 Frame = -3

Query: 441 VAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFAGDYGWDTAGLSADPE 262
           +  T+ +    V RAAVEFYGP+RAK+LGPFSEN TP+YLTGEF GDYGWDTAGLSADP+
Sbjct: 15  IRQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQ 74

Query: 261 TFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKSGAAIFASDGLNYLGN 82
           TF+RYRE+ELIHARWA+LGALGI+TPELLS+Y GV+F EP+WFK+GA IFA  GLNYLGN
Sbjct: 75  TFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGN 134

Query: 81  PSLVHAQSIIATLATQVVLMGLVEGYR 1
            SL+HAQSIIATLA QVVLMGL E YR
Sbjct: 135 ESLIHAQSIIATLAVQVVLMGLAEAYR 161


>ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
           nagariensis] gi|300262048|gb|EFJ46257.1|
           light-harvesting chlorophyll a/b-binding protein [Volvox
           carteri f. nagariensis]
          Length = 251

 Score =  235 bits (600), Expect = 8e-60
 Identities = 118/161 (73%), Positives = 130/161 (80%)
 Frame = -3

Query: 483 ALAQKSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFAG 304
           A+  KS L S++RP A    +  R V RAA+E+YGP+R K+LGPFSE  TP YLTGEF G
Sbjct: 2   AVVAKSALRSSVRP-ATVASRAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPG 60

Query: 303 DYGWDTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKSG 124
           DYGWDTAGLSADPETF RYRELELIHARWAMLGALG VTPELLSKY GV F E +WFK+G
Sbjct: 61  DYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAG 120

Query: 123 AAIFASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           A IFA  GLNYLGN +LVHAQSIIATLA QVV+MGL E YR
Sbjct: 121 AQIFAEGGLNYLGNENLVHAQSIIATLAFQVVVMGLAEAYR 161


>ref|XP_005651359.1| major light-harvesting complex II protein m10 [Coccomyxa
           subellipsoidea C-169] gi|384253340|gb|EIE26815.1| major
           light-harvesting complex II protein m10 [Coccomyxa
           subellipsoidea C-169]
          Length = 250

 Score =  234 bits (597), Expect = 2e-59
 Identities = 112/164 (68%), Positives = 137/164 (83%)
 Frame = -3

Query: 492 MTSALAQKSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGE 313
           M S +  K+FLG++L    PT GKGT+QVTRAA+EFYGP RA +LGPF+++  P YL GE
Sbjct: 1   MASTMMAKTFLGASLAKAVPTSGKGTKQVTRAAIEFYGPNRAGYLGPFTKS--PSYLNGE 58

Query: 312 FAGDYGWDTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWF 133
           + GDYGWDTAGLSADPETF+RYRE+E+IHARWAMLGALG VTPELL+K  GV F E +W+
Sbjct: 59  YPGDYGWDTAGLSADPETFARYREIEVIHARWAMLGALGCVTPELLAK-NGVSFGEAVWW 117

Query: 132 KSGAAIFASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           K+G+ IFA  GL+YLGNPSL+HAQSIIA + +QV+LMGL+EGYR
Sbjct: 118 KAGSQIFAPGGLDYLGNPSLIHAQSIIAIVFSQVLLMGLIEGYR 161


>ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
           nagariensis] gi|300265820|gb|EFJ50010.1| hypothetical
           protein VOLCADRAFT_80470 [Volvox carteri f. nagariensis]
          Length = 252

 Score =  233 bits (595), Expect = 3e-59
 Identities = 115/162 (70%), Positives = 130/162 (80%)
 Frame = -3

Query: 486 SALAQKSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFA 307
           SA+ + +   +++RP  P   +  R V RAA+E+YGP+R K+LGPFSE  TP YLTGEF 
Sbjct: 2   SAVVKSAVRSTSVRPT-PVGSRAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFP 60

Query: 306 GDYGWDTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKS 127
           GDYGWDTAGLSADPETF RYRELELIHARWAMLGALG VTPELLSKY GV F E +WFK+
Sbjct: 61  GDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKA 120

Query: 126 GAAIFASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           GA IFA  GLNYLGN +LVHAQSIIATLA QVV+MGL E YR
Sbjct: 121 GAQIFAEGGLNYLGNENLVHAQSIIATLAFQVVVMGLAEAYR 162


>ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
           nagariensis] gi|300263246|gb|EFJ47448.1| hypothetical
           protein VOLCADRAFT_109135 [Volvox carteri f.
           nagariensis]
          Length = 251

 Score =  233 bits (595), Expect = 3e-59
 Identities = 117/161 (72%), Positives = 129/161 (80%)
 Frame = -3

Query: 483 ALAQKSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFAG 304
           A   KS + S++RP A    +  R V RAA+E+YGP+R K+LGPFSE  TP YLTGEF G
Sbjct: 2   AAIPKSAVRSSVRP-ATASSRAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPG 60

Query: 303 DYGWDTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKSG 124
           DYGWDTAGLSADPETF RYRELELIHARWAMLGALG VTPELLSKY GV F E +WFK+G
Sbjct: 61  DYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAG 120

Query: 123 AAIFASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           A IFA  GLNYLGN +LVHAQSIIATLA QVV+MGL E YR
Sbjct: 121 AQIFAEGGLNYLGNENLVHAQSIIATLAFQVVVMGLAEAYR 161


>ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
           nagariensis] gi|300261970|gb|EFJ46179.1| hypothetical
           protein VOLCADRAFT_81918 [Volvox carteri f. nagariensis]
          Length = 251

 Score =  232 bits (592), Expect = 7e-59
 Identities = 116/157 (73%), Positives = 127/157 (80%)
 Frame = -3

Query: 471 KSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFAGDYGW 292
           KS   S++RPV     +  R V RAA+E+YGP+R K+LGPFSE  TP YLTGEF GDYGW
Sbjct: 6   KSAARSSVRPVT-VASRAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGW 64

Query: 291 DTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKSGAAIF 112
           DTAGLSADPETF RYRELELIHARWAMLGALG VTPELLSKY GV F E +WFK+GA IF
Sbjct: 65  DTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIF 124

Query: 111 ASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           A  GLNYLGN +LVHAQSIIATLA QVV+MGL E YR
Sbjct: 125 AEGGLNYLGNENLVHAQSIIATLAFQVVVMGLAEAYR 161


>gb|AAB70556.1| chlorophyll a/b binding protein [Tetraselmis sp. RG-15]
          Length = 251

 Score =  231 bits (588), Expect = 2e-58
 Identities = 115/162 (70%), Positives = 132/162 (81%)
 Frame = -3

Query: 486 SALAQKSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFA 307
           +A+A +SF  +    V  +  +G +QVTRAAVEFYGP+RAKWLGPFS++ TP YLTGEF 
Sbjct: 2   AAVAARSFAATVAGQVGAS-ARGQKQVTRAAVEFYGPDRAKWLGPFSDD-TPSYLTGEFP 59

Query: 306 GDYGWDTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKS 127
           GDYGWDTAGLSADPETF+ YRELELIHARWAMLGALG VTPELLSKY GV+F E +WFK+
Sbjct: 60  GDYGWDTAGLSADPETFASYRELELIHARWAMLGALGCVTPELLSKYAGVEFGEAVWFKA 119

Query: 126 GAAIFASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           GA IFA  GL+YLGN SLVHAQSI+A L  QVVLMG  E +R
Sbjct: 120 GAQIFADGGLDYLGNSSLVHAQSILAILGCQVVLMGGAEAFR 161


>ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
           nagariensis] gi|300258258|gb|EFJ42496.1| hypothetical
           protein VOLCADRAFT_77072 [Volvox carteri f. nagariensis]
          Length = 250

 Score =  231 bits (588), Expect = 2e-58
 Identities = 115/161 (71%), Positives = 128/161 (79%)
 Frame = -3

Query: 483 ALAQKSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGEFAG 304
           A   KS + S++RP   +  +  R V RAA+E+YGP+R K+LGPFSE   P YLTGEF G
Sbjct: 2   AAIAKSAVRSSVRPTVAS--RAARVVPRAAIEWYGPDRPKFLGPFSEGDVPSYLTGEFPG 59

Query: 303 DYGWDTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKSG 124
           DYGWDTAGLSADPETF RYRELELIHARWAMLGALG VTPELLSKY GV F E +WFK+G
Sbjct: 60  DYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAG 119

Query: 123 AAIFASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           A IFA  GLNYLGN +LVHAQSIIATLA QVV+MGL E YR
Sbjct: 120 AQIFAEGGLNYLGNENLVHAQSIIATLAFQVVVMGLAEAYR 160


>ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type I, chloroplast
           precursor [Chlamydomonas reinhardtii]
           gi|158275836|gb|EDP01611.1| chloropyll a-b binding
           protein of LHCII type I, chloroplast precursor
           [Chlamydomonas reinhardtii]
          Length = 253

 Score =  229 bits (583), Expect = 8e-58
 Identities = 112/164 (68%), Positives = 126/164 (76%)
 Frame = -3

Query: 492 MTSALAQKSFLGSTLRPVAPTQGKGTRQVTRAAVEFYGPERAKWLGPFSENATPDYLTGE 313
           M  ALA +  L  T +               + VEFYGP RAKWLGP+SENATP YLTGE
Sbjct: 1   MAFALASRKALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGE 60

Query: 312 FAGDYGWDTAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWF 133
           F GDYGWDTAGLSADPETF RYRELELIHARWAMLGALG +TPELL+K  G KF E +WF
Sbjct: 61  FPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCLTPELLAK-SGTKFGEAVWF 119

Query: 132 KSGAAIFASDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
           K+GA IF+  GL+YLGNPSLVHAQ+I+ATLA QV+LMGL+EGYR
Sbjct: 120 KAGAQIFSEGGLDYLGNPSLVHAQNIVATLAVQVILMGLIEGYR 163


>ref|XP_001695466.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
           reinhardtii] gi|19423287|gb|AAL88457.1|AF479778_1 major
           light-harvesting complex II protein m9 [Chlamydomonas
           reinhardtii] gi|158275949|gb|EDP01724.1| chlorophyll a-b
           binding protein of LHCII [Chlamydomonas reinhardtii]
          Length = 254

 Score =  228 bits (582), Expect = 1e-57
 Identities = 108/133 (81%), Positives = 118/133 (88%)
 Frame = -3

Query: 399 AAVEFYGPERAKWLGPFSENATPDYLTGEFAGDYGWDTAGLSADPETFSRYRELELIHAR 220
           A +EFYGP RAKWLGP+SEN+TP YLTGEF GDYGWDTAGLSADPETF RYRELELIHAR
Sbjct: 33  AGIEFYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHAR 92

Query: 219 WAMLGALGIVTPELLSKYGGVKFQEPIWFKSGAAIFASDGLNYLGNPSLVHAQSIIATLA 40
           WAMLGALGIVTPELL K  GV+F E +WFK+GA IF   GLNYLGNPSL+HAQ+I+ATLA
Sbjct: 93  WAMLGALGIVTPELLQK-NGVQFGEAVWFKAGAQIFQEGGLNYLGNPSLIHAQNIVATLA 151

Query: 39  TQVVLMGLVEGYR 1
            QVVL+GLVEGYR
Sbjct: 152 VQVVLLGLVEGYR 164


>gb|ABD37913.1| light-harvesting chlorophyll-a/b binding protein LhcbM8
           [Chlamydomonas incerta]
          Length = 245

 Score =  227 bits (578), Expect = 3e-57
 Identities = 107/133 (80%), Positives = 118/133 (88%)
 Frame = -3

Query: 399 AAVEFYGPERAKWLGPFSENATPDYLTGEFAGDYGWDTAGLSADPETFSRYRELELIHAR 220
           + VEFYGP RAKWLGP+SEN+TP YLTGEF GDYGWDTAGLSADPETF RYRELELIHAR
Sbjct: 24  SGVEFYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFQRYRELELIHAR 83

Query: 219 WAMLGALGIVTPELLSKYGGVKFQEPIWFKSGAAIFASDGLNYLGNPSLVHAQSIIATLA 40
           WAMLGALGIVTPELL+K  GV F E +WFK+GA IF   GLNYLGNPSL+HAQ+I+ATLA
Sbjct: 84  WAMLGALGIVTPELLAK-NGVPFGEAVWFKAGAQIFQEGGLNYLGNPSLIHAQNIVATLA 142

Query: 39  TQVVLMGLVEGYR 1
            QV+L+GLVEGYR
Sbjct: 143 VQVILLGLVEGYR 155


>sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
           chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
           gi|18063|emb|CAA38635.1| chlorophyll a/b-binding protein
           [Chlamydomonas moewusii]
          Length = 256

 Score =  226 bits (577), Expect = 4e-57
 Identities = 108/156 (69%), Positives = 129/156 (82%), Gaps = 5/156 (3%)
 Frame = -3

Query: 453 TLRPVAPTQGKGTRQVTRA-----AVEFYGPERAKWLGPFSENATPDYLTGEFAGDYGWD 289
           T++  A  +  GT+Q   A      +E+YGP+RAKWLGPFS N TP YLTGEF GDYGWD
Sbjct: 12  TVKVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTN-TPAYLTGEFPGDYGWD 70

Query: 288 TAGLSADPETFSRYRELELIHARWAMLGALGIVTPELLSKYGGVKFQEPIWFKSGAAIFA 109
           TAGLSADPETF +YRELE+IHARWA+LGALGI+TPELLS Y GVKF EP+WFK+GA IF+
Sbjct: 71  TAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFS 130

Query: 108 SDGLNYLGNPSLVHAQSIIATLATQVVLMGLVEGYR 1
             GL+YLG+P+L+HAQ+I+ATLA QVVLMGL+EGYR
Sbjct: 131 EGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYR 166


>ref|XP_002957491.1| hypothetical protein VOLCADRAFT_84135 [Volvox carteri f.
           nagariensis] gi|300257133|gb|EFJ41385.1| hypothetical
           protein VOLCADRAFT_84135 [Volvox carteri f. nagariensis]
          Length = 254

 Score =  226 bits (576), Expect = 5e-57
 Identities = 108/133 (81%), Positives = 118/133 (88%)
 Frame = -3

Query: 399 AAVEFYGPERAKWLGPFSENATPDYLTGEFAGDYGWDTAGLSADPETFSRYRELELIHAR 220
           A +E+YGP RAKWLGP+SENATP YLTGEF GDYGWDTAGLSADPETF RYRELELIHAR
Sbjct: 33  AGIEWYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHAR 92

Query: 219 WAMLGALGIVTPELLSKYGGVKFQEPIWFKSGAAIFASDGLNYLGNPSLVHAQSIIATLA 40
           WAMLGALG VTPELLSK  GV+F E +WFK+GA IF   GL+YLGNPSLVHAQ+I+ATLA
Sbjct: 93  WAMLGALGCVTPELLSK-NGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLA 151

Query: 39  TQVVLMGLVEGYR 1
            QV+LMGLVEGYR
Sbjct: 152 CQVILMGLVEGYR 164