BLASTX nr result
ID: Gardenia21_contig00027646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00027646
(538 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD93813.1| RNA polymerase beta chain, partial (chloroplast) ... 291 1e-76
ref|YP_817472.1| RNA polymerase beta' subunit [Coffea arabica] g... 291 1e-76
gb|AEM44881.1| RNA polymerase beta chain, partial [Petalonyx par... 278 1e-72
gb|AEM44884.1| RNA polymerase beta chain, partial [Hydrophyllum ... 277 2e-72
gb|AIW05425.1| RNA polymerase beta chain [Neobracea bahamensis] 277 3e-72
ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [H... 276 4e-72
gb|ADD31152.1| RNA polymerase beta'' subunit protein (chloroplas... 276 4e-72
ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea s... 276 4e-72
emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp... 276 4e-72
ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea s... 276 4e-72
gb|AHE41665.1| RNA polymerase beta' subunit, partial (chloroplas... 276 6e-72
gb|AKZ23924.1| RNA polymerase beta'' subunit (plastid) [Ellisia ... 275 7e-72
ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana s... 275 7e-72
gb|ADO13882.1| RNA polymerase beta subunit, partial (chloroplast... 275 7e-72
gb|ADD31150.1| RNA polymerase beta'' subunit protein (chloroplas... 275 1e-71
gb|ABV65725.1| RNA polymerase beta'' subunit (chloroplast) [Corn... 275 1e-71
gb|ABD93753.1| RNA polymerase beta chain, partial (chloroplast) ... 275 1e-71
gb|AHW52174.1| RNA polymerase beta' subunit (chloroplast) [Rhazy... 274 2e-71
ref|YP_009041077.1| RNA polymerase beta' subunit [Rhazya stricta... 274 2e-71
gb|AHE41660.1| RNA polymerase beta' subunit, partial (chloroplas... 274 2e-71
>gb|ABD93813.1| RNA polymerase beta chain, partial (chloroplast) [Coffea arabica]
Length = 850
Score = 291 bits (746), Expect = 1e-76
Identities = 145/165 (87%), Positives = 148/165 (89%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILVTNYLQLDN+KETFQVIKYYSMDENGKIY NWYFRHHNYCEET
Sbjct: 541 QILVTNYLQLDNIKETFQVIKYYSMDENGKIYNPDPCNNIILNPLNLNWYFRHHNYCEET 600
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KNRPHLK GQVIFVQVDSVVIRSAKPYLATPGATVHGHYGE L
Sbjct: 601 STIISLGQFICENVCIAKNRPHLKPGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGETL 660
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGDILVTFIYEKSRSGDITQGLPKVEQ+LEVRSIDSISMNLQKR
Sbjct: 661 YEGDILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLQKR 705
>ref|YP_817472.1| RNA polymerase beta' subunit [Coffea arabica]
gi|122153611|sp|A0A325.1|RPOC2_COFAR RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
(chloroplast) [Coffea arabica]
gi|116242154|gb|ABJ89669.1| RNA polymerase beta' subunit
[Coffea arabica]
Length = 1391
Score = 291 bits (746), Expect = 1e-76
Identities = 145/165 (87%), Positives = 148/165 (89%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILVTNYLQLDN+KETFQVIKYYSMDENGKIY NWYFRHHNYCEET
Sbjct: 1007 QILVTNYLQLDNIKETFQVIKYYSMDENGKIYNPDPCNNIILNPLNLNWYFRHHNYCEET 1066
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KNRPHLK GQVIFVQVDSVVIRSAKPYLATPGATVHGHYGE L
Sbjct: 1067 STIISLGQFICENVCIAKNRPHLKPGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGETL 1126
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGDILVTFIYEKSRSGDITQGLPKVEQ+LEVRSIDSISMNLQKR
Sbjct: 1127 YEGDILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLQKR 1171
>gb|AEM44881.1| RNA polymerase beta chain, partial [Petalonyx parryi]
Length = 515
Score = 278 bits (710), Expect = 1e-72
Identities = 137/165 (83%), Positives = 144/165 (87%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILVTNYLQLDNLK+TF+V+KYY MDENGK Y NWYF HHNYCEET
Sbjct: 251 QILVTNYLQLDNLKQTFEVLKYYLMDENGKFYNPDPCSNIILNPFNLNWYFLHHNYCEET 310
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQV+ VQ+DSVVIRSAKPYLATPGATVHGHYGEIL
Sbjct: 311 STIISLGQFICENVCIAKNGPHLKSGQVLIVQIDSVVIRSAKPYLATPGATVHGHYGEIL 370
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 371 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 415
>gb|AEM44884.1| RNA polymerase beta chain, partial [Hydrophyllum fendleri]
Length = 455
Score = 277 bits (709), Expect = 2e-72
Identities = 139/165 (84%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILVTNYLQLDN K+TFQVIKYY MDENGKIY NWYF HHN CEET
Sbjct: 190 QILVTNYLQLDNFKQTFQVIKYYLMDENGKIYNPDPGGNIILNPFHLNWYFLHHNCCEET 249
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
TIISLGQFICENVCI+KNRPHLKSGQVI VQVDS+VIRSAKPYLATPGATVHGHYGEIL
Sbjct: 250 FTIISLGQFICENVCIAKNRPHLKSGQVILVQVDSIVIRSAKPYLATPGATVHGHYGEIL 309
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 310 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 354
>gb|AIW05425.1| RNA polymerase beta chain [Neobracea bahamensis]
Length = 1385
Score = 277 bits (708), Expect = 3e-72
Identities = 139/165 (84%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QIL+TNYLQLDNLK TFQVIKYYSMDE+GK Y NWYF HNYCEET
Sbjct: 1001 QILLTNYLQLDNLKRTFQVIKYYSMDESGKFYNPDPCSNIIFNPFNLNWYFLRHNYCEET 1060
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQVIFVQ DSVVIRSAKPYLATPGATVHGHYGEIL
Sbjct: 1061 STIISLGQFICENVCIAKNGPHLKSGQVIFVQADSVVIRSAKPYLATPGATVHGHYGEIL 1120
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1121 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1165
>ref|YP_009110592.1| RNA polymerase beta'' chain (chloroplast) [Hesperelaea palmeri]
gi|725798276|emb|CED79752.1| RNA polymerase beta'' chain
(chloroplast) [Hesperelaea palmeri]
Length = 1394
Score = 276 bits (706), Expect = 4e-72
Identities = 138/165 (83%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILV NYLQLDNLK+TFQVIKYY MDEN KIY NWYF HHNYC+ET
Sbjct: 1010 QILVNNYLQLDNLKQTFQVIKYYLMDENEKIYNPEPGSNIILNPFNLNWYFLHHNYCQET 1069
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQVI VQVDSVVIRSAKPYLATPGATVHGHYGEIL
Sbjct: 1070 STIISLGQFICENVCIAKNAPHLKSGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEIL 1129
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD L+TFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1130 YEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1174
>gb|ADD31152.1| RNA polymerase beta'' subunit protein (chloroplast) [Ehretia
acuminata]
Length = 1381
Score = 276 bits (706), Expect = 4e-72
Identities = 139/165 (84%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILVT+YLQLDNLK TFQVIKYY MDENGKIY NWYF HHN CEET
Sbjct: 1006 QILVTHYLQLDNLKHTFQVIKYYLMDENGKIYNPDPGSNIILNPFHLNWYFLHHNCCEET 1065
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
TIISLGQFICENVCI+KNRPHLKSGQVI VQVDS+VIRSAKPYLATPGATVHGHYGEIL
Sbjct: 1066 FTIISLGQFICENVCIAKNRPHLKSGQVILVQVDSIVIRSAKPYLATPGATVHGHYGEIL 1125
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1126 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1170
>ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea subsp. cuspidata]
gi|334084940|emb|CBJ04288.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 276 bits (706), Expect = 4e-72
Identities = 138/165 (83%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILV NYLQLDNLK+TFQVIKYY MDEN KIY NWYF HHNYC+ET
Sbjct: 1010 QILVNNYLQLDNLKQTFQVIKYYLMDENEKIYNPEPGSNIILNPFNLNWYFLHHNYCQET 1069
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQVI VQVDSVVIRSAKPYLATPGATVHGHYGEIL
Sbjct: 1070 STIISLGQFICENVCIAKNAPHLKSGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEIL 1129
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD L+TFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1130 YEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1174
>emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
Length = 1394
Score = 276 bits (706), Expect = 4e-72
Identities = 138/165 (83%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILV NYLQLDNLK+TFQVIKYY MDEN KIY NWYF HHNYC+ET
Sbjct: 1010 QILVNNYLQLDNLKQTFQVIKYYLMDENEKIYNPEPGSNIILNPFNLNWYFLHHNYCQET 1069
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQVI VQVDSVVIRSAKPYLATPGATVHGHYGEIL
Sbjct: 1070 STIISLGQFICENVCIAKNAPHLKSGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEIL 1129
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD L+TFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1130 YEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1174
>ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
gi|334701878|ref|YP_004564487.1| RNA polymerase beta''
chain [Olea europaea subsp. maroccana]
gi|328795423|emb|CBR30304.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|334084391|emb|CBR23819.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
gi|334084854|emb|CBS29226.1| RNA polymerase beta'' chain
[Olea europaea subsp. maroccana]
gi|334085026|emb|CBR23728.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 276 bits (706), Expect = 4e-72
Identities = 138/165 (83%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILV NYLQLDNLK+TFQVIKYY MDEN KIY NWYF HHNYC+ET
Sbjct: 1010 QILVNNYLQLDNLKQTFQVIKYYLMDENEKIYNPEPGSNIILNPFNLNWYFLHHNYCQET 1069
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQVI VQVDSVVIRSAKPYLATPGATVHGHYGEIL
Sbjct: 1070 STIISLGQFICENVCIAKNAPHLKSGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEIL 1129
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD L+TFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1130 YEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1174
>gb|AHE41665.1| RNA polymerase beta' subunit, partial (chloroplast) [Philadelphus
coronarius]
Length = 1368
Score = 276 bits (705), Expect = 6e-72
Identities = 137/165 (83%), Positives = 144/165 (87%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILVTNYLQLDNLK+TFQV+KYY MDENGKIY NWYF HNYCEET
Sbjct: 984 QILVTNYLQLDNLKQTFQVLKYYLMDENGKIYNPDPCSNIILNPFNLNWYFLDHNYCEET 1043
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQV+ VQ+DSVVIRSAKPYLATPGATVHGHYG+IL
Sbjct: 1044 STIISLGQFICENVCIAKNGPHLKSGQVLIVQIDSVVIRSAKPYLATPGATVHGHYGQIL 1103
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1104 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1148
>gb|AKZ23924.1| RNA polymerase beta'' subunit (plastid) [Ellisia nyctelea]
Length = 1379
Score = 275 bits (704), Expect = 7e-72
Identities = 137/165 (83%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILVTNYLQLDNLK+TFQVIKY+ MDENGKIY NWYF HHN CEET
Sbjct: 1004 QILVTNYLQLDNLKQTFQVIKYFLMDENGKIYNPDPGSNIILNPFHLNWYFLHHNCCEET 1063
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
TIISLGQFICENVCI+KNRPHLKSGQVI VQ+DS+VIRSAKPYLATPGATVHGHYGEI
Sbjct: 1064 FTIISLGQFICENVCIAKNRPHLKSGQVILVQIDSIVIRSAKPYLATPGATVHGHYGEIF 1123
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1124 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1168
>ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana subsp. woodiana]
gi|334084649|emb|CBS29340.1| RNA polymerase beta'' chain
[Olea woodiana subsp. woodiana]
Length = 1394
Score = 275 bits (704), Expect = 7e-72
Identities = 137/165 (83%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILV NYLQLDNLK+TFQVIKYY MDEN KIY NWYF HHNYC+ET
Sbjct: 1010 QILVNNYLQLDNLKQTFQVIKYYLMDENEKIYNPEPGSNIILNPFNLNWYFLHHNYCQET 1069
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQV+ VQVDSVVIRSAKPYLATPGATVHGHYGEIL
Sbjct: 1070 STIISLGQFICENVCIAKNAPHLKSGQVLLVQVDSVVIRSAKPYLATPGATVHGHYGEIL 1129
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD L+TFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1130 YEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1174
>gb|ADO13882.1| RNA polymerase beta subunit, partial (chloroplast) [Citronella
suaveolens]
Length = 1169
Score = 275 bits (704), Expect = 7e-72
Identities = 136/165 (82%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILVTNYLQLDNLK+TFQV+KYY MDENGK Y NW+F HHNYCEET
Sbjct: 979 QILVTNYLQLDNLKQTFQVLKYYLMDENGKFYNPDPCSNIILNPFNLNWHFLHHNYCEET 1038
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQV+ VQVDSVVIRSAKPYLATPGATVHGHYGEI
Sbjct: 1039 STIISLGQFICENVCIAKNGPHLKSGQVLIVQVDSVVIRSAKPYLATPGATVHGHYGEIF 1098
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD LVTFIYEKSRSGDITQGLPKVEQVLEVRS+DSISMNL+KR
Sbjct: 1099 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSVDSISMNLEKR 1143
>gb|ADD31150.1| RNA polymerase beta'' subunit protein (chloroplast) [Aucuba japonica]
Length = 1390
Score = 275 bits (703), Expect = 1e-71
Identities = 138/165 (83%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QILVTNYLQLDNLK+TFQ +KYY MDENGKIY NWYF HHNYCEET
Sbjct: 1006 QILVTNYLQLDNLKQTFQGLKYYLMDENGKIYNPDPCSNIILNPFNLNWYFLHHNYCEET 1065
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQV+ VQVDSVVIRSAK YLATPGATVHGHYGEIL
Sbjct: 1066 STIISLGQFICENVCIAKNGPHLKSGQVLIVQVDSVVIRSAKSYLATPGATVHGHYGEIL 1125
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1126 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1170
>gb|ABV65725.1| RNA polymerase beta'' subunit (chloroplast) [Cornus florida]
Length = 1391
Score = 275 bits (702), Expect = 1e-71
Identities = 135/165 (81%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
Q+LVTNYLQLDNLK+ FQV+KYY MDENGKIY NWYF HHNYCEET
Sbjct: 1006 QLLVTNYLQLDNLKQAFQVLKYYLMDENGKIYNPDPCSNIFLNPLNLNWYFLHHNYCEET 1065
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQV+ VQ+DS+VIRSAKPYLATPGATVHGHYGE L
Sbjct: 1066 STIISLGQFICENVCIAKNGPHLKSGQVLIVQIDSLVIRSAKPYLATPGATVHGHYGETL 1125
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1126 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1170
>gb|ABD93753.1| RNA polymerase beta chain, partial (chloroplast) [Cornus florida]
Length = 812
Score = 275 bits (702), Expect = 1e-71
Identities = 135/165 (81%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
Q+LVTNYLQLDNLK+ FQV+KYY MDENGKIY NWYF HHNYCEET
Sbjct: 503 QLLVTNYLQLDNLKQAFQVLKYYLMDENGKIYNPDPCSNIFLNPLNLNWYFLHHNYCEET 562
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQV+ VQ+DS+VIRSAKPYLATPGATVHGHYGE L
Sbjct: 563 STIISLGQFICENVCIAKNGPHLKSGQVLIVQIDSLVIRSAKPYLATPGATVHGHYGETL 622
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 623 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 667
>gb|AHW52174.1| RNA polymerase beta' subunit (chloroplast) [Rhazya stricta]
Length = 1390
Score = 274 bits (700), Expect = 2e-71
Identities = 136/165 (82%), Positives = 145/165 (87%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QIL+TNYLQLDNLK+TFQVIKYYSMDE+GK Y NWYF HNYCEET
Sbjct: 1004 QILLTNYLQLDNLKQTFQVIKYYSMDESGKSYNPDPCSNIICNPFNLNWYFLRHNYCEET 1063
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STII+LGQFICENVCI+KN PHLKSGQVIFVQ+DSVVIRSA+PYLATPGATVHGHYGEIL
Sbjct: 1064 STIINLGQFICENVCIAKNGPHLKSGQVIFVQIDSVVIRSARPYLATPGATVHGHYGEIL 1123
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
+EGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1124 HEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1168
>ref|YP_009041077.1| RNA polymerase beta' subunit [Rhazya stricta]
gi|645929199|gb|AIB08723.1| RNA polymerase beta' subunit
(plastid) [Rhazya stricta]
Length = 1386
Score = 274 bits (700), Expect = 2e-71
Identities = 136/165 (82%), Positives = 145/165 (87%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
QIL+TNYLQLDNLK+TFQVIKYYSMDE+GK Y NWYF HNYCEET
Sbjct: 1000 QILLTNYLQLDNLKQTFQVIKYYSMDESGKSYNPDPCSNIICNPFNLNWYFLRHNYCEET 1059
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STII+LGQFICENVCI+KN PHLKSGQVIFVQ+DSVVIRSA+PYLATPGATVHGHYGEIL
Sbjct: 1060 STIINLGQFICENVCIAKNGPHLKSGQVIFVQIDSVVIRSARPYLATPGATVHGHYGEIL 1119
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
+EGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1120 HEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1164
>gb|AHE41660.1| RNA polymerase beta' subunit, partial (chloroplast) [Exbucklandia
populnea]
Length = 1368
Score = 274 bits (700), Expect = 2e-71
Identities = 136/165 (82%), Positives = 143/165 (86%)
Frame = -2
Query: 495 QILVTNYLQLDNLKETFQVIKYYSMDENGKIYXXXXXXXXXXXXXXXNWYFRHHNYCEET 316
+ILVT YLQLDNLK+TFQV+ YY MDENG+IY NWYF HHNYCEET
Sbjct: 984 KILVTKYLQLDNLKQTFQVLNYYLMDENGRIYNPDPCSNIILNSFNLNWYFLHHNYCEET 1043
Query: 315 STIISLGQFICENVCISKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGEIL 136
STIISLGQFICENVCI+KN PHLKSGQV+ VQVDSVVIRSAKPYLATPGATVHGHYGEIL
Sbjct: 1044 STIISLGQFICENVCIAKNGPHLKSGQVLIVQVDSVVIRSAKPYLATPGATVHGHYGEIL 1103
Query: 135 YEGDILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLQKR 1
YEGD LVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNL+KR
Sbjct: 1104 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR 1148