BLASTX nr result
ID: Gardenia21_contig00027188
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00027188
(1297 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 82 6e-17
gb|ABR16307.1| unknown [Picea sitchensis] 80 6e-15
emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera] 79 1e-14
emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera] 81 4e-14
emb|CAN81437.1| hypothetical protein VITISV_001281 [Vitis vinifera] 85 2e-13
gb|AIC77183.1| polyprotein [Gossypium barbadense] 69 3e-13
emb|CAN82144.1| hypothetical protein VITISV_043495 [Vitis vinifera] 72 2e-12
emb|CAN64476.1| hypothetical protein VITISV_017482 [Vitis vinifera] 80 4e-12
emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera] 72 6e-12
emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera] 75 7e-12
ref|XP_009356290.1| PREDICTED: retrovirus-related Pol polyprotei... 74 7e-12
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 72 1e-11
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera] 67 2e-11
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 78 2e-11
ref|XP_012075839.1| PREDICTED: uncharacterized protein LOC105637... 77 3e-11
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 70 4e-11
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 70 4e-11
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 70 4e-11
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 64 5e-11
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera] 76 6e-11
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 82.0 bits (201), Expect(2) = 6e-17
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +2
Query: 917 FKCSKRKCHSQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSD-EVPSIGGSKYS 1093
FK C + + C+L K HRD GKAWR + LELIH LC + GG++Y
Sbjct: 452 FKSLSYLCKNHMVRVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYF 511
Query: 1094 ITFIDAFSKKTSVYFFKNKFDACDVFKNFKVYRE 1195
ITFID FS+K +YF K K +A FK+FK + E
Sbjct: 512 ITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTE 545
Score = 34.7 bits (78), Expect(2) = 6e-17
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 1191 EKQSGYYIKILRIDRGTKFFMCDDYLTKHGIKH 1289
E QSGY IK LR DRG ++ + ++ + GI H
Sbjct: 545 ENQSGYKIKTLRSDRGGEYIVFGNFFKEQGIHH 577
>gb|ABR16307.1| unknown [Picea sitchensis]
Length = 407
Score = 79.7 bits (195), Expect(2) = 6e-15
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Frame = +2
Query: 890 FARKFRLPKFKCSKRKCHSQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSD-EV 1066
F + LPK S+ C E C+ K+H + +KGK+WR K L L+H L E
Sbjct: 93 FEMVYGLPKISQSQGVC-----EGCMSGKQHMEKFIKGKSWRAKTPLHLVHSDLMGPLEH 147
Query: 1067 PSIGGSKYSITFIDAFSKKTSVYFFKNKFDACDVFKNFKVYREAE 1201
PSI GS+Y +TFID +S++ VYF KNK + + FK FK + E +
Sbjct: 148 PSISGSRYVLTFIDDYSRRIWVYFLKNKDEVFEKFKEFKAFVEKQ 192
Score = 30.0 bits (66), Expect(2) = 6e-15
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKFF--MCDDYLTKHGIK 1286
+EKQSG IKILR D G ++ D Y +GIK
Sbjct: 189 VEKQSGKSIKILRTDNGKEYVNKEFDHYCKYNGIK 223
>emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera]
Length = 338
Score = 79.0 bits (193), Expect(2) = 1e-14
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +2
Query: 944 SQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSD-EVPSIGGSKYSITFIDAFSK 1120
++V + C L K HR LKG AWR K+ LELIH +C +PS G +KY + FID F++
Sbjct: 220 NEVCDGCALGKHHRQSFLKGVAWRAKKVLELIHTDICGPMSIPSQGNNKYFVLFIDDFTR 279
Query: 1121 KTSVYFFKNKFDACDVFKNFKVYREAE 1201
T V+F K K + +FK FK + E +
Sbjct: 280 MTWVFFMKQKSEVFSIFKKFKSFVEKQ 306
Score = 29.6 bits (65), Expect(2) = 1e-14
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKF 1247
+EKQSG YIK LR D+G ++
Sbjct: 303 VEKQSGCYIKTLRSDKGMEY 322
>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
Length = 808
Score = 80.9 bits (198), Expect(2) = 4e-14
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +2
Query: 944 SQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSDEVP-SIGGSKYSITFIDAFSK 1120
SQ+ E CV+ K+HR KGK+W+ + LEL+H +C P S GG +Y ITFID +S+
Sbjct: 12 SQICEECVVGKQHRYQFPKGKSWKANKVLELVHSDICGPINPTSNGGKRYFITFIDDYSR 71
Query: 1121 KTSVYFFKNKFDACDVFKNFKVYREAE 1201
KT VYF + K +A FK+FK+ E E
Sbjct: 72 KTWVYFLQEKSEAFSTFKSFKMLVEKE 98
Score = 26.2 bits (56), Expect(2) = 4e-14
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKFFMCD--DYLTKHGIK 1286
+EK++G IKI R DRG ++ + ++ HGI+
Sbjct: 95 VEKEAGKPIKIFRSDRGGEYTSQEFVNFCENHGIQ 129
>emb|CAN81437.1| hypothetical protein VITISV_001281 [Vitis vinifera]
Length = 1008
Score = 84.7 bits (208), Expect = 2e-13
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +2
Query: 944 SQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSDEVPSI-GGSKYSITFIDAFSK 1120
SQV E CV+ K+HR +GK+WR K LELIH +C PS GG +Y ITFID +++
Sbjct: 340 SQVCEECVVSKQHRSQFPQGKSWRAKSVLELIHSDICGXINPSSNGGKRYLITFIDDYTR 399
Query: 1121 KTSVYFFKNKFDACDVFKNFKVYREAE 1201
KT VYF + K +A FK+FK + E E
Sbjct: 400 KTWVYFLQEKXEAFSAFKSFKAHVENE 426
>gb|AIC77183.1| polyprotein [Gossypium barbadense]
Length = 1369
Score = 68.6 bits (166), Expect(2) = 3e-13
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +2
Query: 947 QVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSD-EVPSIGGSKYSITFIDAFSKK 1123
Q+ E+CV K+HR GK+ R ++ LE++H + ++ S+GG++Y +TFID +S+K
Sbjct: 517 QLCEACVKGKQHRQKFEVGKSRRARRPLEIVHTDISGPYDIESLGGNRYYLTFIDDYSRK 576
Query: 1124 TSVYFFKNKFDACDVFKNFKVYREAE 1201
VYF K K +A + FK FK E +
Sbjct: 577 CWVYFLKAKSEALEKFKEFKAMVEKQ 602
Score = 35.4 bits (80), Expect(2) = 3e-13
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKFF--MCDDYLTKHGIKH 1289
+EKQSG Y+KILR DRG ++ + + + HGI H
Sbjct: 599 VEKQSGRYLKILRSDRGGEYTAKLYESFCKDHGIIH 634
>emb|CAN82144.1| hypothetical protein VITISV_043495 [Vitis vinifera]
Length = 567
Score = 71.6 bits (174), Expect(2) = 2e-12
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +2
Query: 944 SQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSD-EVPSIGGSKYSITFIDAFSK 1120
+++ E C L K HR KG AWR K+ LELIH +C PS G +KY + FID F +
Sbjct: 157 NEICEDCXLGKHHRQSFXKGVAWRAKKVLELIHTDICGPMSTPSHGNNKYFVLFIDDFXR 216
Query: 1121 KTSVYFFKNKFDACDVFKNFKVYREAE 1201
T V+F K +FK FK + E +
Sbjct: 217 ITWVFFVKQTSKVFSIFKKFKTFVEKQ 243
Score = 30.0 bits (66), Expect(2) = 2e-12
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKF 1247
+EKQSG YI LR DRG K+
Sbjct: 240 VEKQSGCYIMTLRSDRGMKY 259
>emb|CAN64476.1| hypothetical protein VITISV_017482 [Vitis vinifera]
Length = 497
Score = 80.1 bits (196), Expect = 4e-12
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Frame = +2
Query: 905 RLPKFKCSKRKCHSQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSD-EVPSIGG 1081
R+P+ S + C E CV+ K+HR+ +GK+W+ K++LEL+H +C + S GG
Sbjct: 4 RIPQITISSQFC-----EECVVSKQHRNQFPQGKSWKVKKALELVHFDICGPITLHSNGG 58
Query: 1082 SKYSITFIDAFSKKTSVYFFKNKFDACDVFKNFKVYREAE 1201
+Y ITFID +++K VYF + KF+A FK++K E E
Sbjct: 59 ERYIITFIDDYNRKIWVYFLQEKFEAFVAFKSYKALVEKE 98
>emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera]
Length = 672
Score = 71.6 bits (174), Expect(2) = 6e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +2
Query: 944 SQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSDEVP-SIGGSKYSITFIDAFSK 1120
SQV E CV+ K+HR +GK+ R K LEL+H +C P S GG KY I FID +S+
Sbjct: 349 SQVCEECVVGKQHRSQFPQGKSRRAKNVLELVHSDICGLINPTSNGGKKYLIIFIDDYSR 408
Query: 1121 KTSVYFFKNKFDACDVFKNFKVYREAE 1201
KT V F + K +A FK+FK E E
Sbjct: 409 KTWVSFLQEKSEAFSAFKSFKARVEKE 435
Score = 28.1 bits (61), Expect(2) = 6e-12
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKF------FMCDD 1262
+EK++G IKILR DRG ++ CDD
Sbjct: 432 VEKETGRSIKILRTDRGGEYCSNEFEHFCDD 462
>emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]
Length = 1041
Score = 74.7 bits (182), Expect(2) = 7e-12
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +2
Query: 944 SQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSDEVPSIGGSK-YSITFIDAFSK 1120
SQ E CV+ K+H + + K+WR K++LEL+H +C +P+ GSK Y ITFID +S+
Sbjct: 271 SQFCEECVVSKQHCNQFPQVKSWRAKKALELVHSDICGPIIPNSNGSKRYIITFIDDYSR 330
Query: 1121 KTSVYFFKNKFDACDVFKNFKVYREAE 1201
K VYF + K +A FK++K E E
Sbjct: 331 KIWVYFLQEKSEAFVAFKSYKALVEKE 357
Score = 24.6 bits (52), Expect(2) = 7e-12
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKFFMCD--DYLTKHGIK 1286
+EK+ G IK R+DRG ++ + ++ HGI+
Sbjct: 354 VEKEVGNPIKFFRMDRGGEYNSHEFANFCENHGIR 388
>ref|XP_009356290.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Pyrus x bretschneideri]
Length = 798
Score = 74.3 bits (181), Expect(2) = 7e-12
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +2
Query: 908 LPKFKCSKRKCHSQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSD-EVPSIGGS 1084
LP+ + +K C E C+L K HRD G AWR Q L+LIH +C + P++ G+
Sbjct: 499 LPEIQETKEPC-----EGCILGKHHRDSFETGTAWRASQPLDLIHTDVCGPMKTPTLSGN 553
Query: 1085 KYSITFIDAFSKKTSVYFFKNKFDACDVFKNFKVYREAE 1201
+Y + FID ++ VYF +NK + +FK FKV E +
Sbjct: 554 RYFLLFIDDCTRMVWVYFMRNKSEVFTIFKKFKVMVELQ 592
Score = 25.0 bits (53), Expect(2) = 7e-12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKF 1247
+E QSG IK LR DRG +F
Sbjct: 589 VELQSGLKIKRLRSDRGGEF 608
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 72.0 bits (175), Expect(2) = 1e-11
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Frame = +2
Query: 806 KLRFGTQDVLLHLASGLLIEGNSETNFFFARKFRLPKFKCSKRKCHSQVSESCVLEKKHR 985
K+ + + L HL G L G E +RK + C +QV E C+L K+ +
Sbjct: 458 KMCYKEESWLWHLRFGHLNFGGLE---LLSRKEMVRGLPCINHP--NQVCEGCLLGKQFK 512
Query: 986 DPCLKGKAWRTKQSLELIHLYLCSDEVP-SIGGSKYSITFIDAFSKKTSVYFFKNKFDAC 1162
K + R ++SLELIH +C P S+G S Y + FID FS+KT VYF K K +
Sbjct: 513 MSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVF 572
Query: 1163 DVFKNFKVYREAE 1201
++FK FK + E E
Sbjct: 573 EIFKKFKAHVEKE 585
Score = 26.9 bits (58), Expect(2) = 1e-11
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKF 1247
+EK+SG IK +R DRG +F
Sbjct: 582 VEKESGLVIKTMRSDRGGEF 601
>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
Length = 1424
Score = 67.4 bits (163), Expect(2) = 2e-11
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +2
Query: 962 CVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSD-EVPSIGGSKYSITFIDAFSKKTSVYF 1138
C + HR KG AWR K+ LEL+H +C PS G +KY + FID F++ T V+F
Sbjct: 570 CQRKMHHRQSFPKGVAWRAKKVLELVHTDICGPMSTPSQGNNKYFVLFIDDFTRMTWVFF 629
Query: 1139 FKNKFDACDVFKNFKVYREAE 1201
K K + +FK FK + E +
Sbjct: 630 MKQKSEVFSIFKKFKSFVEKQ 650
Score = 30.8 bits (68), Expect(2) = 2e-11
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKF 1247
+EKQSG YIK LR DRG ++
Sbjct: 647 VEKQSGCYIKTLRSDRGMEY 666
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 77.8 bits (190), Expect = 2e-11
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +2
Query: 944 SQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSDEVP-SIGGSKYSITFIDAFSK 1120
SQ+ E CV+ K+HR KGK+WR + LEL+H +C P S GG +Y ITFI +S
Sbjct: 457 SQICEECVVGKQHRYQFPKGKSWRXNKVLELVHSDICGPINPTSNGGKRYFITFIXDYSX 516
Query: 1121 KTSVYFFKNKFDACDVFKNFKVYREAE 1201
KT VYF + K +A FK+FK+ E E
Sbjct: 517 KTWVYFLQEKSEAFSTFKSFKMLVEKE 543
>ref|XP_012075839.1| PREDICTED: uncharacterized protein LOC105637051 [Jatropha curcas]
Length = 740
Score = 77.0 bits (188), Expect = 3e-11
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +2
Query: 947 QVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSD-EVPSIGGSKYSITFIDAFSKK 1123
QV E+C+ K HR P +K + W TK LEL+H +C + SIGG+KY +TFID FSKK
Sbjct: 449 QVCEACIFGKNHRMPFVK-EPWHTKFPLELVHTNVCGPMNISSIGGNKYFLTFIDDFSKK 507
Query: 1124 TSVYFFKNKFDACDVFKNFKVYREAE 1201
T VY ++K + FK FK + E +
Sbjct: 508 TWVYLLRSKDEVFHYFKLFKAFVERQ 533
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 70.1 bits (170), Expect(2) = 4e-11
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Frame = +2
Query: 806 KLRFGTQDVLLHLASGLLIEGNSETNFFFARKFRLPKFKCSKRKCHSQVSESCVLEKKHR 985
K+ + + L HL G L G E +RK + C +QV E C+L K+ +
Sbjct: 458 KMCYKEESWLWHLRFGHLNFGGLE---LLSRKEMVRGLPCINHP--NQVCEGCLLGKQFK 512
Query: 986 DPCLKGKAWRTKQSLELIHLYLCSDEVP-SIGGSKYSITFIDAFSKKTSVYFFKNKFDAC 1162
K + R ++ LELIH +C P S+G S Y + FID FS+KT VYF K K +
Sbjct: 513 MSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVF 572
Query: 1163 DVFKNFKVYREAE 1201
++FK FK + E E
Sbjct: 573 EIFKKFKAHVEKE 585
Score = 26.9 bits (58), Expect(2) = 4e-11
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKF 1247
+EK+SG IK +R DRG +F
Sbjct: 582 VEKESGLVIKTMRSDRGGEF 601
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 70.1 bits (170), Expect(2) = 4e-11
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Frame = +2
Query: 806 KLRFGTQDVLLHLASGLLIEGNSETNFFFARKFRLPKFKCSKRKCHSQVSESCVLEKKHR 985
K+ + + L HL G L G E +RK + C +QV E C+L K+ +
Sbjct: 458 KMCYKEESWLWHLRFGHLNFGGLE---LLSRKEMVRGLPCINHP--NQVCEGCLLGKQFK 512
Query: 986 DPCLKGKAWRTKQSLELIHLYLCSDEVP-SIGGSKYSITFIDAFSKKTSVYFFKNKFDAC 1162
K + R ++ LELIH +C P S+G S Y + FID FS+KT VYF K K +
Sbjct: 513 MSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVF 572
Query: 1163 DVFKNFKVYREAE 1201
++FK FK + E E
Sbjct: 573 EIFKKFKAHVEKE 585
Score = 26.9 bits (58), Expect(2) = 4e-11
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKF 1247
+EK+SG IK +R DRG +F
Sbjct: 582 VEKESGLVIKTMRSDRGGEF 601
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 70.1 bits (170), Expect(2) = 4e-11
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Frame = +2
Query: 806 KLRFGTQDVLLHLASGLLIEGNSETNFFFARKFRLPKFKCSKRKCHSQVSESCVLEKKHR 985
K+ + + L HL G L G E +RK + C +QV E C+L K+ +
Sbjct: 458 KMCYKEESWLWHLRFGHLNFGGLE---LLSRKEMVRGLPCINHP--NQVCEGCLLGKQFK 512
Query: 986 DPCLKGKAWRTKQSLELIHLYLCSDEVP-SIGGSKYSITFIDAFSKKTSVYFFKNKFDAC 1162
K + R ++ LELIH +C P S+G S Y + FID FS+KT VYF K K +
Sbjct: 513 MSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVF 572
Query: 1163 DVFKNFKVYREAE 1201
++FK FK + E E
Sbjct: 573 EIFKKFKAHVEKE 585
Score = 26.9 bits (58), Expect(2) = 4e-11
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKF 1247
+EK+SG IK +R DRG +F
Sbjct: 582 VEKESGLVIKTMRSDRGGEF 601
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 63.9 bits (154), Expect(2) = 5e-11
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +2
Query: 944 SQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSD-EVPSIGGSKYSITFIDAFSK 1120
+Q+ E+C+L K R K R K+ L+L++ +C PS G +KY + FID +S+
Sbjct: 190 NQLCEACLLGKHARRSFPKEANSRAKEPLQLVYTDVCGPINPPSCGNNKYFLLFIDDYSR 249
Query: 1121 KTSVYFFKNKFDACDVFKNFKVYREAE 1201
KT VYF K K +A FKNFK E E
Sbjct: 250 KTWVYFLKQKSEAFVAFKNFKALVEKE 276
Score = 32.7 bits (73), Expect(2) = 5e-11
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +3
Query: 1188 IEKQSGYYIKILRIDRGTKFFM--CDDYLTKHGIK 1286
+EK+SGY IK LR DRG +F +++ K+GI+
Sbjct: 273 VEKESGYVIKALRSDRGGEFTSKEFNEFCEKYGIR 307
>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
Length = 1246
Score = 76.3 bits (186), Expect = 6e-11
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +2
Query: 944 SQVSESCVLEKKHRDPCLKGKAWRTKQSLELIHLYLCSDEVP-SIGGSKYSITFIDAFSK 1120
SQ+ E CV K+HR KGK+WR + LEL+H +C P S GG +Y ITFI +S
Sbjct: 457 SQICEECVXGKQHRYQFPKGKSWRXNKVLELVHSDICGPINPTSNGGKRYFITFIXDYSW 516
Query: 1121 KTSVYFFKNKFDACDVFKNFKVYREAE 1201
KT VYF + K +A FK+FK+ E E
Sbjct: 517 KTWVYFLQEKSEAFSTFKSFKMLVEKE 543