BLASTX nr result
ID: Gardenia21_contig00027142
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00027142
(297 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012849237.1| PREDICTED: pentatricopeptide repeat-containi... 66 3e-09
gb|EYU27680.1| hypothetical protein MIMGU_mgv1a022067mg, partial... 66 3e-09
ref|XP_009625289.1| PREDICTED: pentatricopeptide repeat-containi... 62 7e-08
ref|XP_009625290.1| PREDICTED: pentatricopeptide repeat-containi... 62 7e-08
ref|XP_009773981.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-07
ref|XP_009773982.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-07
emb|CDP17864.1| unnamed protein product [Coffea canephora] 62 2e-07
ref|XP_006373596.1| hypothetical protein POPTR_0016s01140g [Popu... 59 7e-07
ref|XP_010271319.1| PREDICTED: pentatricopeptide repeat-containi... 55 4e-06
>ref|XP_012849237.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like isoform X2 [Erythranthe guttatus]
Length = 555
Score = 65.9 bits (159), Expect(2) = 3e-09
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Frame = -2
Query: 284 MRRDCGELPRGKHYAVMVDML----------DFVKISHCKDHPVV*SV*NEGCKYHGDVD 135
M RD G PRGKHYA+MVD+L +FV++S CKDHP V C+ HG++D
Sbjct: 384 MLRDYGVRPRGKHYAIMVDLLGRAGRLEEAYEFVQVSPCKDHPAVWGALLGACRIHGNMD 443
Query: 134 LVNLVANNF 108
+V + A NF
Sbjct: 444 IVKIAAKNF 452
Score = 21.9 bits (45), Expect(2) = 3e-09
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 109 FELEPQNAG 83
FELEP+NAG
Sbjct: 453 FELEPENAG 461
>gb|EYU27680.1| hypothetical protein MIMGU_mgv1a022067mg, partial [Erythranthe
guttata]
Length = 473
Score = 65.9 bits (159), Expect(2) = 3e-09
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Frame = -2
Query: 284 MRRDCGELPRGKHYAVMVDML----------DFVKISHCKDHPVV*SV*NEGCKYHGDVD 135
M RD G PRGKHYA+MVD+L +FV++S CKDHP V C+ HG++D
Sbjct: 252 MLRDYGVRPRGKHYAIMVDLLGRAGRLEEAYEFVQVSPCKDHPAVWGALLGACRIHGNMD 311
Query: 134 LVNLVANNF 108
+V + A NF
Sbjct: 312 IVKIAAKNF 320
Score = 21.9 bits (45), Expect(2) = 3e-09
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 109 FELEPQNAG 83
FELEP+NAG
Sbjct: 321 FELEPENAG 329
>ref|XP_009625289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
isoform X1 [Nicotiana tomentosiformis]
Length = 545
Score = 62.4 bits (150), Expect(2) = 7e-08
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Frame = -2
Query: 284 MRRDCGELPRGKHYAVMVDML----------DFVKISHCKDHPVV*SV*NEGCKYHGDVD 135
M RD G PRGKHYA +VD+L +FVK S C +HPV+ CK HGD++
Sbjct: 385 MMRDYGLRPRGKHYAAIVDLLGRAGRLQEAHEFVKNSRCGEHPVLWGALLGACKIHGDIE 444
Query: 134 LVNLVANNF 108
+V L A NF
Sbjct: 445 MVKLAARNF 453
Score = 20.8 bits (42), Expect(2) = 7e-08
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3
Query: 109 FELEPQNAG 83
F+LEP+NAG
Sbjct: 454 FDLEPENAG 462
>ref|XP_009625290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
isoform X2 [Nicotiana tomentosiformis]
Length = 308
Score = 62.4 bits (150), Expect(2) = 7e-08
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Frame = -2
Query: 284 MRRDCGELPRGKHYAVMVDML----------DFVKISHCKDHPVV*SV*NEGCKYHGDVD 135
M RD G PRGKHYA +VD+L +FVK S C +HPV+ CK HGD++
Sbjct: 148 MMRDYGLRPRGKHYAAIVDLLGRAGRLQEAHEFVKNSRCGEHPVLWGALLGACKIHGDIE 207
Query: 134 LVNLVANNF 108
+V L A NF
Sbjct: 208 MVKLAARNF 216
Score = 20.8 bits (42), Expect(2) = 7e-08
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3
Query: 109 FELEPQNAG 83
F+LEP+NAG
Sbjct: 217 FDLEPENAG 225
>ref|XP_009773981.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
isoform X1 [Nicotiana sylvestris]
Length = 546
Score = 60.8 bits (146), Expect(2) = 2e-07
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Frame = -2
Query: 284 MRRDCGELPRGKHYAVMVDML----------DFVKISHCKDHPVV*SV*NEGCKYHGDVD 135
M RD G PRGKHYA +VD+L +FV+ S C +HPV+ CK HGD++
Sbjct: 386 MMRDYGLRPRGKHYAAIVDLLGRAGRLQEAHEFVQNSRCGEHPVLWGALLGACKIHGDIE 445
Query: 134 LVNLVANNF 108
+V L A NF
Sbjct: 446 MVKLAARNF 454
Score = 20.8 bits (42), Expect(2) = 2e-07
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3
Query: 109 FELEPQNAG 83
F+LEP+NAG
Sbjct: 455 FDLEPENAG 463
>ref|XP_009773982.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
isoform X2 [Nicotiana sylvestris]
Length = 320
Score = 60.8 bits (146), Expect(2) = 2e-07
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Frame = -2
Query: 284 MRRDCGELPRGKHYAVMVDML----------DFVKISHCKDHPVV*SV*NEGCKYHGDVD 135
M RD G PRGKHYA +VD+L +FV+ S C +HPV+ CK HGD++
Sbjct: 160 MMRDYGLRPRGKHYAAIVDLLGRAGRLQEAHEFVQNSRCGEHPVLWGALLGACKIHGDIE 219
Query: 134 LVNLVANNF 108
+V L A NF
Sbjct: 220 MVKLAARNF 228
Score = 20.8 bits (42), Expect(2) = 2e-07
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3
Query: 109 FELEPQNAG 83
F+LEP+NAG
Sbjct: 229 FDLEPENAG 237
>emb|CDP17864.1| unnamed protein product [Coffea canephora]
Length = 705
Score = 61.6 bits (148), Expect = 2e-07
Identities = 33/69 (47%), Positives = 39/69 (56%), Gaps = 10/69 (14%)
Frame = -2
Query: 284 MRRDCGELPRGKHYAVMVDML----------DFVKISHCKDHPVV*SV*NEGCKYHGDVD 135
M RD G P+GKHYA MVD+L +FV S CKDHPVV CK HG++D
Sbjct: 375 MTRDYGIQPKGKHYAAMVDLLGRAGRLADAYEFVVNSPCKDHPVVWGALLGACKNHGNMD 434
Query: 134 LVNLVANNF 108
L + A NF
Sbjct: 435 LAKIAAKNF 443
>ref|XP_006373596.1| hypothetical protein POPTR_0016s01140g [Populus trichocarpa]
gi|550320530|gb|ERP51393.1| hypothetical protein
POPTR_0016s01140g [Populus trichocarpa]
Length = 509
Score = 58.9 bits (141), Expect(2) = 7e-07
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 10/69 (14%)
Frame = -2
Query: 284 MRRDCGELPRGKHYAVMVDML----------DFVKISHCKDHPVV*SV*NEGCKYHGDVD 135
MRRD G PRGKHYA MVD+L +FV + CK+H V+ CK HGD+D
Sbjct: 348 MRRDYGIQPRGKHYAAMVDLLGRAGRLKEAYEFVVNAPCKEHSVLWGALLGACKIHGDMD 407
Query: 134 LVNLVANNF 108
L+ L A +
Sbjct: 408 LIELAARKY 416
Score = 20.8 bits (42), Expect(2) = 7e-07
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3
Query: 109 FELEPQNAG 83
FEL+P+NAG
Sbjct: 417 FELDPENAG 425
>ref|XP_010271319.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
[Nelumbo nucifera]
Length = 439
Score = 55.5 bits (132), Expect(2) = 4e-06
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Frame = -2
Query: 284 MRRDCGELPRGKHYAVMVDML----------DFVKISHCKDHPVV*SV*NEGCKYHGDVD 135
M RD G PRGKHYA MVD+L +FV S C+DH V+ C+ HG+++
Sbjct: 279 MSRDYGIRPRGKHYAAMVDLLGRAGRLNEAYEFVLNSPCEDHSVIWGALLGACRIHGNLE 338
Query: 134 LVNLVANNF 108
LV L A F
Sbjct: 339 LVKLAAKKF 347
Score = 21.9 bits (45), Expect(2) = 4e-06
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 109 FELEPQNAG 83
FELEP+NAG
Sbjct: 348 FELEPENAG 356