BLASTX nr result

ID: Gardenia21_contig00026559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00026559
         (201 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173482.1| hypothetical protein NitaMp145 [Nicotiana tabac...    52   2e-09
ref|YP_006291826.1| orf42 (mitochondrion) [Daucus carota subsp. ...    52   5e-09
ref|YP_009049760.1| hypothetical protein (mitochondrion) [Capsic...    52   1e-08
gb|KJB09782.1| hypothetical protein B456_001G165500 [Gossypium r...    50   2e-08
ref|YP_004842085.1| hypothetical protein BemaM_p038 [Beta macroc...    62   2e-07
ref|NP_064035.1| orf110a gene product (mitochondrion) [Beta vulg...    53   1e-06

>ref|YP_173482.1| hypothetical protein NitaMp145 [Nicotiana tabacum]
           gi|56806647|dbj|BAD83548.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 103

 Score = 52.0 bits (123), Expect(2) = 2e-09
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -3

Query: 88  GLVRTQSSLVRQNWIKKRECSTGTTANKL 2
           GLVR+QS LVR+NW KKRECSTGTTAN +
Sbjct: 73  GLVRSQSCLVRRNWTKKRECSTGTTANNV 101



 Score = 36.6 bits (83), Expect(2) = 2e-09
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -1

Query: 135 RYRFILRTWFSLTTLRG 85
           RYRFILRTW SLTTLRG
Sbjct: 57  RYRFILRTWSSLTTLRG 73


>ref|YP_006291826.1| orf42 (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081988|gb|AEY81180.1| orf42 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 133

 Score = 52.4 bits (124), Expect(2) = 5e-09
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 88  GLVRTQSSLVRQNWIKKRECSTGTTANK 5
           GLVR+QS LVR+NW KK+ECSTGTTANK
Sbjct: 71  GLVRSQSCLVRRNWAKKKECSTGTTANK 98



 Score = 34.7 bits (78), Expect(2) = 5e-09
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -1

Query: 135 RYRFILRTWFSLTTLRG 85
           RYRFIL TW SLTTLRG
Sbjct: 55  RYRFILHTWSSLTTLRG 71


>ref|YP_009049760.1| hypothetical protein (mitochondrion) [Capsicum annuum]
           gi|667751875|gb|AIG89962.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
           gi|667752032|gb|AIG90118.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
          Length = 103

 Score = 52.0 bits (123), Expect(2) = 1e-08
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -3

Query: 88  GLVRTQSSLVRQNWIKKRECSTGTTANKL 2
           GLVR+QS LVR+NW KKRECSTGTTAN +
Sbjct: 73  GLVRSQSCLVRRNWTKKRECSTGTTANNV 101



 Score = 33.9 bits (76), Expect(2) = 1e-08
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -1

Query: 135 RYRFILRTWFSLTTLRG 85
           RYRFI RTW SLTTLRG
Sbjct: 57  RYRFIPRTWSSLTTLRG 73


>gb|KJB09782.1| hypothetical protein B456_001G165500 [Gossypium raimondii]
          Length = 732

 Score = 49.7 bits (117), Expect(2) = 2e-08
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -3

Query: 88  GLVRTQSSLVRQNWIKKRECSTGTTANK 5
           GLVR+QS LVR+NW KKREC TGTT NK
Sbjct: 160 GLVRSQSCLVRRNWTKKRECLTGTTVNK 187



 Score = 35.4 bits (80), Expect(2) = 2e-08
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -1

Query: 135 RYRFILRTWFSLTTLRG 85
           RYRFILRTW +LTTLRG
Sbjct: 144 RYRFILRTWSNLTTLRG 160


>ref|YP_004842085.1| hypothetical protein BemaM_p038 [Beta macrocarpa]
           gi|345500071|emb|CBX24887.1| hypothetical protein [Beta
           macrocarpa]
          Length = 160

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 35/58 (60%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = +2

Query: 5   FVGRCSGRALSFLYPILSYQRRLSSYQP-RRVVRLNHVRRMNLYLICTLSRRLSVQMS 175
           FVGRCSGRALSFL  I SYQ R +SYQP +   RLN VRRMNLYL   ++ R  +  S
Sbjct: 98  FVGRCSGRALSFLCLIPSYQTRRTSYQPVKGCERLNQVRRMNLYLCTEVAGRRPLNCS 155


>ref|NP_064035.1| orf110a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|9049336|dbj|BAA99346.1| orf110a
           (mitochondrion) [Beta vulgaris subsp. vulgaris]
          Length = 110

 Score = 52.8 bits (125), Expect(2) = 1e-06
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = +1

Query: 4   ICWPLFRSSTLFSLSNSVLPKKTEFLPTPKSCE 102
           +C PLFR STL SLSNSVLP KT+FLPT + CE
Sbjct: 32  LCRPLFRPSTLLSLSNSVLPDKTDFLPTREGCE 64



 Score = 26.6 bits (57), Expect(2) = 1e-06
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +2

Query: 101 RLNHVRRMNLYLICT 145
           RLN VRRMNLYL CT
Sbjct: 65  RLNQVRRMNLYL-CT 78


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