BLASTX nr result

ID: Gardenia21_contig00020679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00020679
         (319 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844...    67   4e-09
ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    60   6e-07
gb|AID60103.1| hypothetical protein [Brassica napus]                   60   6e-07
ref|XP_013710279.1| PREDICTED: uncharacterized protein LOC106414...    58   3e-06
ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein A...    57   4e-06
ref|XP_008237302.1| PREDICTED: putative ribonuclease H protein A...    56   9e-06
ref|XP_007031938.1| Ribonuclease H protein [Theobroma cacao] gi|...    56   9e-06

>ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844431 [Brassica rapa]
          Length = 1834

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
 Frame = -3

Query: 245  LVRHGRLLTNAQLQAKKLHPNGQCGACQAKKETALHALRDCKWIKTLWKKLVHPAHWRRF 66
            LV H  ++TN + + + L  NG C  C++  ET LH LRDC     LW++LV P+  +RF
Sbjct: 1520 LVSHQVIMTNMERKRRHLSDNGMCQLCKSGNETILHTLRDCPASMGLWRRLVDPSRQQRF 1579

Query: 65   RTQSLRQWVDWNI--MQSEVGKR 3
              QSL QW+  N+   QS  G+R
Sbjct: 1580 FDQSLLQWLYENLTSAQSANGER 1602


>ref|XP_009126860.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103851737
            [Brassica rapa]
          Length = 1638

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/73 (38%), Positives = 42/73 (57%)
 Frame = -3

Query: 245  LVRHGRLLTNAQLQAKKLHPNGQCGACQAKKETALHALRDCKWIKTLWKKLVHPAHWRRF 66
            LV H  ++TN + + + +  NG C  C++  ET LH LRDC     LW+KLV P   +RF
Sbjct: 1484 LVTHQVIMTNMERKRRHISENGTCPLCKSGDETILHVLRDCPAAAGLWRKLVLPTRQQRF 1543

Query: 65   RTQSLRQWVDWNI 27
               +L +W+  N+
Sbjct: 1544 FNLTLFEWLYENL 1556


>gb|AID60103.1| hypothetical protein [Brassica napus]
          Length = 620

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 28/73 (38%), Positives = 42/73 (57%)
 Frame = -3

Query: 245 LVRHGRLLTNAQLQAKKLHPNGQCGACQAKKETALHALRDCKWIKTLWKKLVHPAHWRRF 66
           LV H  ++TN + + + +  NG C  C++  ET LH LRDC     LW+KLV P   +RF
Sbjct: 306 LVTHQVIMTNMERKRRHISENGTCPLCKSGDETILHVLRDCPAAAGLWRKLVLPTRQQRF 365

Query: 65  RTQSLRQWVDWNI 27
              +L +W+  N+
Sbjct: 366 FNLTLFEWLYENL 378


>ref|XP_013710279.1| PREDICTED: uncharacterized protein LOC106414114 [Brassica napus]
          Length = 1895

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 29/79 (36%), Positives = 40/79 (50%)
 Frame = -3

Query: 245  LVRHGRLLTNAQLQAKKLHPNGQCGACQAKKETALHALRDCKWIKTLWKKLVHPAHWRRF 66
            LV H  ++TN + + + L  NG C  C+   ET LH LRDC     LW K V P+   RF
Sbjct: 1581 LVSHQVIMTNMERKRRHLSDNGVCSLCKNGDETILHVLRDCPAAAGLWTKSVMPSRQHRF 1640

Query: 65   RTQSLRQWVDWNIMQSEVG 9
             +  L +W+  N+     G
Sbjct: 1641 FSLPLLEWLYDNLASDRSG 1659


>ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 491

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = -3

Query: 245 LVRHGRLLTNAQLQAKKLHPNGQCGACQAKKETALHALRDCKWIKTLWKKLVHPAHWRR- 69
           L  H RL T A++  + +H +  C  C    ET LH LRDC   K LW +L+ P+ WR+ 
Sbjct: 294 LALHDRLKTKAEIGRRHIHIDWTCDHCGVASETTLHVLRDCFMAKRLWNQLL-PSEWRQV 352

Query: 68  FRTQSLRQWVDWNIMQSE 15
           F + +L  W+  N+  ++
Sbjct: 353 FFSSNLLDWLTLNLRSNQ 370


>ref|XP_008237302.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 394

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/78 (34%), Positives = 42/78 (53%)
 Frame = -3

Query: 245 LVRHGRLLTNAQLQAKKLHPNGQCGACQAKKETALHALRDCKWIKTLWKKLVHPAHWRRF 66
           LV  G++L+N Q   ++L  +  CG+C    E+ LH LRDC   K +W  L++ +   RF
Sbjct: 79  LVFQGKILSNEQRVRRQLSLDASCGSCHWPMESILHILRDCVKAKKVWNALLNSSQSARF 138

Query: 65  RTQSLRQWVDWNIMQSEV 12
            T   + W+  N+M   V
Sbjct: 139 FTMDFQPWLRVNLMSKIV 156


>ref|XP_007031938.1| Ribonuclease H protein [Theobroma cacao]
           gi|508710967|gb|EOY02864.1| Ribonuclease H protein
           [Theobroma cacao]
          Length = 660

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 26/75 (34%), Positives = 41/75 (54%)
 Frame = -3

Query: 236 HGRLLTNAQLQAKKLHPNGQCGACQAKKETALHALRDCKWIKTLWKKLVHPAHWRRFRTQ 57
           HGRLLTN +   ++L  +  C  C+ + ET  H LRDC    +LW K++       F T 
Sbjct: 346 HGRLLTNRERLHRQLTTDSLCPQCRMEDETVTHVLRDCMVATSLWVKIIPQHEQNDFFTF 405

Query: 56  SLRQWVDWNIMQSEV 12
            LR+W+  N+ + ++
Sbjct: 406 PLREWLVSNLQKQQL 420


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