BLASTX nr result
ID: Gardenia21_contig00020635
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00020635
(225 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa s... 129 1e-27
ref|XP_005651359.1| major light-harvesting complex II protein m1... 124 4e-26
ref|XP_005651078.1| chlorophyll a/b-binding protein P25 [Coccomy... 124 4e-26
ref|XP_001693987.1| light-harvesting protein of photosystem II [... 120 4e-25
ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Ch... 120 4e-25
ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa s... 120 4e-25
gb|ABD37910.1| light-harvesting chlorophyll-a/b binding protein ... 120 4e-25
gb|ABD37911.1| light-harvesting chlorophyll-a/b binding protein ... 120 4e-25
ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa s... 120 5e-25
sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding prot... 119 7e-25
ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type... 119 7e-25
ref|XP_001695344.1| chloropyll a-b binding protein of LHCII [Chl... 119 7e-25
emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta] 119 9e-25
emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta] 119 9e-25
emb|CDP19007.1| unnamed protein product [Coffea canephora] 119 9e-25
ref|XP_012081439.1| PREDICTED: chlorophyll a-b binding protein 1... 119 9e-25
gb|AAB19041.1| type 1 light-harvesting chlorophyll a/b-binding p... 119 9e-25
sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding pro... 119 9e-25
ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvo... 119 9e-25
ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volv... 119 9e-25
>ref|XP_005644537.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384246503|gb|EIE19993.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 254
Score = 129 bits (323), Expect = 1e-27
Identities = 60/71 (84%), Positives = 64/71 (90%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAEL+VKEIKNGRLA F+ GFFVQAIVTGKGPIQNL+DHLADPF N
Sbjct: 182 FDPLGLADDPDTFAELKVKEIKNGRLAQFAALGFFVQAIVTGKGPIQNLEDHLADPFAVN 241
Query: 40 GFTVGATKFVP 8
GFT+GA KFVP
Sbjct: 242 GFTIGAQKFVP 252
>ref|XP_005651359.1| major light-harvesting complex II protein m10 [Coccomyxa
subellipsoidea C-169] gi|384253340|gb|EIE26815.1| major
light-harvesting complex II protein m10 [Coccomyxa
subellipsoidea C-169]
Length = 250
Score = 124 bits (310), Expect = 4e-26
Identities = 62/72 (86%), Positives = 64/72 (88%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPI+NL DHLA+P N
Sbjct: 180 FDPLGLADDPDTFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLANPSVNN 239
Query: 40 GFTVGATKFVPS 5
GF ATKFVPS
Sbjct: 240 GF-AAATKFVPS 250
>ref|XP_005651078.1| chlorophyll a/b-binding protein P25 [Coccomyxa subellipsoidea
C-169] gi|384253059|gb|EIE26534.1| chlorophyll
a/b-binding protein P25 [Coccomyxa subellipsoidea C-169]
Length = 234
Score = 124 bits (310), Expect = 4e-26
Identities = 60/72 (83%), Positives = 64/72 (88%)
Frame = -3
Query: 223 YFDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKT 44
YFDPLGLADDPD FAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGP++NL+ HLADP
Sbjct: 164 YFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLESHLADPSVN 223
Query: 43 NGFTVGATKFVP 8
NGF ATKFVP
Sbjct: 224 NGF-AAATKFVP 234
>ref|XP_001693987.1| light-harvesting protein of photosystem II [Chlamydomonas
reinhardtii] gi|15430556|dbj|BAB64413.1|
light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii] gi|15430564|dbj|BAB64417.1|
light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii] gi|158277154|gb|EDP02923.1|
light-harvesting protein of photosystem II
[Chlamydomonas reinhardtii]
Length = 249
Score = 120 bits (301), Expect = 4e-25
Identities = 60/72 (83%), Positives = 62/72 (86%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNL DHLA+P N
Sbjct: 178 FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVN 237
Query: 40 GFTVGATKFVPS 5
F ATKF PS
Sbjct: 238 AFAY-ATKFTPS 248
>ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii] gi|12658406|gb|AAK01125.1|AF330793_1
light-harvesting complex II protein precursor
[Chlamydomonas reinhardtii] gi|158277282|gb|EDP03051.1|
chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 249
Score = 120 bits (301), Expect = 4e-25
Identities = 60/72 (83%), Positives = 62/72 (86%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNL DHLA+P N
Sbjct: 178 FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVN 237
Query: 40 GFTVGATKFVPS 5
F ATKF PS
Sbjct: 238 AFAY-ATKFTPS 248
>ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384253398|gb|EIE26873.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 250
Score = 120 bits (301), Expect = 4e-25
Identities = 59/71 (83%), Positives = 62/71 (87%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD F+EL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPI+NL DHLADP N
Sbjct: 181 FDPLGLADDPDTFSELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPGVNN 240
Query: 40 GFTVGATKFVP 8
GF ATKF P
Sbjct: 241 GF-AAATKFAP 250
>gb|ABD37910.1| light-harvesting chlorophyll-a/b binding protein LhcbM2a
[Chlamydomonas incerta]
Length = 246
Score = 120 bits (301), Expect = 4e-25
Identities = 60/72 (83%), Positives = 62/72 (86%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNL DHLA+P N
Sbjct: 175 FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVN 234
Query: 40 GFTVGATKFVPS 5
F ATKF PS
Sbjct: 235 AFAY-ATKFTPS 245
>gb|ABD37911.1| light-harvesting chlorophyll-a/b binding protein LhcbM2b
[Chlamydomonas incerta]
Length = 229
Score = 120 bits (301), Expect = 4e-25
Identities = 60/72 (83%), Positives = 62/72 (86%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNL DHLA+P N
Sbjct: 158 FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVN 217
Query: 40 GFTVGATKFVPS 5
F ATKF PS
Sbjct: 218 AFAY-ATKFTPS 228
>ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384252962|gb|EIE26437.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 120 bits (300), Expect = 5e-25
Identities = 59/71 (83%), Positives = 61/71 (85%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAEL+ KEIKNGRLAMFSMFGFFVQAIVTGKGPI+NL DHLADP N
Sbjct: 176 FDPLGLADDPDTFAELKTKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPGVNN 235
Query: 40 GFTVGATKFVP 8
GF ATKF P
Sbjct: 236 GF-AAATKFAP 245
>sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|18063|emb|CAA38635.1| chlorophyll a/b-binding protein
[Chlamydomonas moewusii]
Length = 256
Score = 119 bits (299), Expect = 7e-25
Identities = 60/72 (83%), Positives = 61/72 (84%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAEL+VKEIKNGRLAMFS FGFFVQAIVTGKGPIQNL DHLADP N
Sbjct: 185 FDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNN 244
Query: 40 GFTVGATKFVPS 5
F ATKF PS
Sbjct: 245 AF-AAATKFTPS 255
>ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type I, chloroplast
precursor [Chlamydomonas reinhardtii]
gi|158275836|gb|EDP01611.1| chloropyll a-b binding
protein of LHCII type I, chloroplast precursor
[Chlamydomonas reinhardtii]
Length = 253
Score = 119 bits (299), Expect = 7e-25
Identities = 59/72 (81%), Positives = 62/72 (86%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGP+QNL DHLA+P N
Sbjct: 182 FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNN 241
Query: 40 GFTVGATKFVPS 5
F ATKF PS
Sbjct: 242 AFAF-ATKFTPS 252
>ref|XP_001695344.1| chloropyll a-b binding protein of LHCII [Chlamydomonas reinhardtii]
gi|158275827|gb|EDP01602.1| chloropyll a-b binding
protein of LHCII [Chlamydomonas reinhardtii]
Length = 254
Score = 119 bits (299), Expect = 7e-25
Identities = 59/72 (81%), Positives = 62/72 (86%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGP+QNL DHLA+P N
Sbjct: 183 FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNN 242
Query: 40 GFTVGATKFVPS 5
F ATKF PS
Sbjct: 243 AFAF-ATKFTPS 253
>emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 119 bits (298), Expect = 9e-25
Identities = 59/71 (83%), Positives = 62/71 (87%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPDAFAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPI+NL DHLADP N
Sbjct: 203 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNN 262
Query: 40 GFTVGATKFVP 8
+ AT FVP
Sbjct: 263 AWAY-ATNFVP 272
>emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 119 bits (298), Expect = 9e-25
Identities = 59/71 (83%), Positives = 62/71 (87%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPDAFAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPI+NL DHLADP N
Sbjct: 203 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNN 262
Query: 40 GFTVGATKFVP 8
+ AT FVP
Sbjct: 263 AWAY-ATNFVP 272
>emb|CDP19007.1| unnamed protein product [Coffea canephora]
Length = 265
Score = 119 bits (298), Expect = 9e-25
Identities = 60/71 (84%), Positives = 62/71 (87%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPDAFAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNL DHLADP N
Sbjct: 194 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLIDHLADPVTNN 253
Query: 40 GFTVGATKFVP 8
+ AT FVP
Sbjct: 254 AWAY-ATNFVP 263
>ref|XP_012081439.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic
[Jatropha curcas] gi|643718813|gb|KDP29912.1|
hypothetical protein JCGZ_18481 [Jatropha curcas]
Length = 265
Score = 119 bits (298), Expect = 9e-25
Identities = 59/71 (83%), Positives = 62/71 (87%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPDAFAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPI+NL DHLADP N
Sbjct: 194 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANN 253
Query: 40 GFTVGATKFVP 8
+ AT FVP
Sbjct: 254 AWAY-ATNFVP 263
>gb|AAB19041.1| type 1 light-harvesting chlorophyll a/b-binding polypeptide,
partial [Pinus palustris]
Length = 95
Score = 119 bits (298), Expect = 9e-25
Identities = 59/71 (83%), Positives = 62/71 (87%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPDAFAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPI+NL DHLADP N
Sbjct: 24 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 83
Query: 40 GFTVGATKFVP 8
+ AT FVP
Sbjct: 84 AWAY-ATNFVP 93
>sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1A,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1A; Short=CAB; AltName: Full=LHCP;
Flags: Precursor gi|20661|emb|CAA32657.1| unnamed
protein product [Pinus sylvestris]
Length = 278
Score = 119 bits (298), Expect = 9e-25
Identities = 59/71 (83%), Positives = 62/71 (87%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPDAFAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPI+NL DHLADP N
Sbjct: 207 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
Query: 40 GFTVGATKFVP 8
+ AT FVP
Sbjct: 267 AWAY-ATNFVP 276
>ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis] gi|300265820|gb|EFJ50010.1| hypothetical
protein VOLCADRAFT_80470 [Volvox carteri f. nagariensis]
Length = 252
Score = 119 bits (298), Expect = 9e-25
Identities = 59/72 (81%), Positives = 62/72 (86%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPI+NL DHLA+P N
Sbjct: 181 FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVN 240
Query: 40 GFTVGATKFVPS 5
F ATKF PS
Sbjct: 241 AFAY-ATKFTPS 251
>ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis] gi|300263246|gb|EFJ47448.1| hypothetical
protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
Length = 251
Score = 119 bits (298), Expect = 9e-25
Identities = 59/72 (81%), Positives = 62/72 (86%)
Frame = -3
Query: 220 FDPLGLADDPDAFAELRVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLQDHLADPFKTN 41
FDPLGLADDPD FAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPI+NL DHLA+P N
Sbjct: 180 FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVN 239
Query: 40 GFTVGATKFVPS 5
F ATKF PS
Sbjct: 240 AFAY-ATKFTPS 250