BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00017194
         (766 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP02357.1| unnamed protein product [Coffea canephora]            232   2e-58
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   127   1e-26
ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [The...   114   6e-23
ref|XP_011085577.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   109   2e-21
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   105   3e-20
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   105   4e-20
gb|KJB42980.1| hypothetical protein B456_007G178100 [Gossypium r...   102   2e-19
ref|XP_012491228.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   102   2e-19
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...    99   4e-18
ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic...    99   4e-18
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...    98   7e-18
ref|XP_008230318.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    96   3e-17
ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    96   3e-17
ref|XP_009373754.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    96   3e-17
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...    92   4e-16
ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    91   1e-15
ref|XP_010694421.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    90   2e-15
ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    87   1e-14
emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]       87   1e-14
ref|XP_009378288.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    85   6e-14

>emb|CDP02357.1| unnamed protein product [Coffea canephora]
          Length = 1040

 Score =  232 bits (591), Expect = 2e-58
 Identities = 118/146 (80%), Positives = 125/146 (85%), Gaps = 3/146 (2%)
 Frame = -1

Query: 430 MSNTIPPISLNINIDHLIPNPVYKPRIFLLKPPEISTVMWRNIAKQASSRT---PKFGSI 260
           MS+T  PISLNINI  L PNPVYKPRIFLLKPPEISTVMW+NIAK  SSRT    +FGSI
Sbjct: 1   MSSTKSPISLNINIGRLTPNPVYKPRIFLLKPPEISTVMWKNIAKLVSSRTLRTQEFGSI 60

Query: 259 FNPNSLPRAYSFLGFSRDSIFPEKFKFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGR 80
           FNP+SLPR YSFLGFS+DSIFPEKFKF TLDFN CSG+GFLE G RKVGEFSTRDE L R
Sbjct: 61  FNPHSLPRTYSFLGFSQDSIFPEKFKFSTLDFNPCSGNGFLEQGFRKVGEFSTRDEFLAR 120

Query: 79  PTLNSVRNQISINGLCQKSYASLAEA 2
           P+LN  RNQISINGL QKSYASLAEA
Sbjct: 121 PSLNFARNQISINGLSQKSYASLAEA 146


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|731418092|ref|XP_010660553.1| PREDICTED: DNA-directed
           RNA polymerase 2, chloroplastic/mitochondrial [Vitis
           vinifera] gi|298204431|emb|CBI16911.3| unnamed protein
           product [Vitis vinifera]
          Length = 1035

 Score =  127 bits (318), Expect = 1e-26
 Identities = 67/144 (46%), Positives = 89/144 (61%)
 Frame = -1

Query: 433 LMSNTIPPISLNINIDHLIPNPVYKPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFN 254
           + S   P +S N+  D  +     KP  F   P +  TVMWRNIAK+A  R P+     +
Sbjct: 1   MSSGKTPILSANLGRDLDLIISFEKPTNFRPNPLKKPTVMWRNIAKRAIPRAPRKCVYLD 60

Query: 253 PNSLPRAYSFLGFSRDSIFPEKFKFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPT 74
              L R YSFLGFS+D IFPE  KF T + +SCS SGF E G R++GE S+R++ +GRP+
Sbjct: 61  SQPLSRRYSFLGFSQDLIFPEIMKFGTFEPSSCSSSGFSEMGFRRIGEISSREDAVGRPS 120

Query: 73  LNSVRNQISINGLCQKSYASLAEA 2
              +RNQ+  +G C KSYAS+AEA
Sbjct: 121 FGCLRNQMGFSGFCPKSYASVAEA 144


>ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508711950|gb|EOY03847.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 1100

 Score =  114 bits (286), Expect = 6e-23
 Identities = 69/151 (45%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
 Frame = -1

Query: 451 PFISQNLMSNTIPPISLNINIDHLIPNPVYKPRIFLLKPPEISTVMWRNIAKQASSRTPK 272
           P IS NL+             DH +P     P I    PP+IS VMWRNIAK A SR   
Sbjct: 7   PLISSNLLDK----------FDHFVPLDNRNPSILYQNPPKISIVMWRNIAKHAISRRTH 56

Query: 271 FGSIFNPNSLPRAYSFLGFSRDSIFPEKFKFRTLDFNS-CSGSGFLEPGLRKVGEFSTRD 95
               F      R YSFLG S+DSIF EK KFR L F S CS S FL+ G R++GE  T  
Sbjct: 57  SFQCF-----ARTYSFLGTSQDSIFHEKSKFRGLKFGSFCSNSRFLDMGGRRIGEVLTNV 111

Query: 94  ELLGRPTLNSVRNQISINGLCQKSYASLAEA 2
           E +G+ +  S RN+I  +GLC + Y S+AEA
Sbjct: 112 EYIGKQSFGSPRNEIGCSGLCPRGYVSVAEA 142


>ref|XP_011085577.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Sesamum indicum]
          Length = 1032

 Score =  109 bits (273), Expect = 2e-21
 Identities = 71/144 (49%), Positives = 88/144 (61%), Gaps = 1/144 (0%)
 Frame = -1

Query: 430 MSNTIPPISLNINIDHLIPNPVYKPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNP 251
           MS++  PIS    ID+    P +KP + +L P     VMWRNI KQ SSRTP      N 
Sbjct: 1   MSSSKTPISFGFKIDNS-RTPFHKP-VLILNPYRDCRVMWRNIVKQVSSRTP-LKLCRNS 57

Query: 250 NSLPRAYSFLGFSRDSIFPEKFKFRTL-DFNSCSGSGFLEPGLRKVGEFSTRDELLGRPT 74
            SL R  SFLG +++S FP+KFKFR L + NS     F E G +K+G+FS+RDE    P 
Sbjct: 58  ESLSRTCSFLGSAQESAFPDKFKFRPLFELNSRPTFCFPELGFQKLGDFSSRDEFSPFP- 116

Query: 73  LNSVRNQISINGLCQKSYASLAEA 2
               RNQI+ NGLC KSYAS+AEA
Sbjct: 117 ---ARNQINWNGLCFKSYASVAEA 137


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Solanum lycopersicum]
          Length = 1022

 Score =  105 bits (263), Expect = 3e-20
 Identities = 63/143 (44%), Positives = 83/143 (58%)
 Frame = -1

Query: 430 MSNTIPPISLNINIDHLIPNPVYKPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNP 251
           MS T  PISL I  D                P  IS +MWRNI KQ S+RTP+   + + 
Sbjct: 1   MSCTKTPISLTIRFDQFTDLET--------NPYHISPIMWRNIVKQFSTRTPQKILLTSK 52

Query: 250 NSLPRAYSFLGFSRDSIFPEKFKFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTL 71
           N    AYS+LGF   S+F +K   R+    SCS SGFLE G + +GEF   DE L RP L
Sbjct: 53  N---HAYSYLGFGLHSVFKDKRTLRSFIPVSCSNSGFLEMGFQNLGEFLPGDEFLRRPLL 109

Query: 70  NSVRNQISINGLCQKSYASLAEA 2
            ++++Q+S N +C+K+YAS+AEA
Sbjct: 110 CAMKSQVSNNDICRKNYASVAEA 132


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score =  105 bits (261), Expect = 4e-20
 Identities = 65/143 (45%), Positives = 85/143 (59%)
 Frame = -1

Query: 430 MSNTIPPISLNINIDHLIPNPVYKPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNP 251
           MS T  PISL I  +                P + S +MWRNI KQ SSRTP+   + + 
Sbjct: 1   MSCTKTPISLTIKFNQFTNLET--------NPYQNSPIMWRNIVKQFSSRTPQKILLTSK 52

Query: 250 NSLPRAYSFLGFSRDSIFPEKFKFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTL 71
           N   R YSFLGF +DS+F +K   R+    SCS SGFLE G + +GEF   DE L RP L
Sbjct: 53  N---RTYSFLGFGQDSVFKDKRILRSFIPVSCSNSGFLEMGFQNLGEF---DEFLRRPLL 106

Query: 70  NSVRNQISINGLCQKSYASLAEA 2
            ++++Q+S N +C+KSYAS+AEA
Sbjct: 107 CAMKSQVSNNDICRKSYASVAEA 129


>gb|KJB42980.1| hypothetical protein B456_007G178100 [Gossypium raimondii]
          Length = 744

 Score =  102 bits (255), Expect = 2e-19
 Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
 Frame = -1

Query: 361 KPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNPNSLPRAYSFLGFSRDSIFPEKFK 182
           KP      PP IS +MWRNIAK A SRT +    F     PR YSFLG ++DS+FPEK K
Sbjct: 27  KPTTLYQNPPRISRIMWRNIAKHAISRT-RCSQWF-----PRTYSFLGVTQDSVFPEKLK 80

Query: 181 FRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTLNSVRNQIS--INGLCQKSYASLA 8
           F +     CS SGFL+ G RK+GE    ++ +G+P    +RN+I   + GLC   YAS+A
Sbjct: 81  FGSF----CSSSGFLDMGGRKIGEVLGNEDCMGKPNFGLLRNEIGCRLRGLCPNGYASVA 136

Query: 7   E 5
           E
Sbjct: 137 E 137


>ref|XP_012491228.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial isoform X1 [Gossypium
           raimondii] gi|763775856|gb|KJB42979.1| hypothetical
           protein B456_007G178100 [Gossypium raimondii]
          Length = 1028

 Score =  102 bits (255), Expect = 2e-19
 Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
 Frame = -1

Query: 361 KPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNPNSLPRAYSFLGFSRDSIFPEKFK 182
           KP      PP IS +MWRNIAK A SRT +    F     PR YSFLG ++DS+FPEK K
Sbjct: 27  KPTTLYQNPPRISRIMWRNIAKHAISRT-RCSQWF-----PRTYSFLGVTQDSVFPEKLK 80

Query: 181 FRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTLNSVRNQIS--INGLCQKSYASLA 8
           F +     CS SGFL+ G RK+GE    ++ +G+P    +RN+I   + GLC   YAS+A
Sbjct: 81  FGSF----CSSSGFLDMGGRKIGEVLGNEDCMGKPNFGLLRNEIGCRLRGLCPNGYASVA 136

Query: 7   E 5
           E
Sbjct: 137 E 137


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris] gi|17221595|dbj|BAB78465.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score = 98.6 bits (244), Expect = 4e-18
 Identities = 63/143 (44%), Positives = 83/143 (58%)
 Frame = -1

Query: 430 MSNTIPPISLNINIDHLIPNPVYKPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNP 251
           MS+T  PISL I ++        KP    + P   S +MWRNI KQ SSRTP+     + 
Sbjct: 1   MSSTKTPISLTIKLNQFTD----KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSK 56

Query: 250 NSLPRAYSFLGFSRDSIFPEKFKFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTL 71
           N   R YSFLGF +DSIF +  KFR+L   SCS    +  G + +GE+   DE L RP  
Sbjct: 57  N---RTYSFLGFGQDSIFKDNTKFRSLIPISCSN---IVMGFQNLGEYLPGDEFLSRPL- 109

Query: 70  NSVRNQISINGLCQKSYASLAEA 2
             ++NQ++ N  C+KSYAS+AEA
Sbjct: 110 --IKNQVNNNFCCRKSYASVAEA 130


>ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Nicotiana sylvestris]
           gi|90111039|sp|Q8VWF8.2|RPOT2_NICSY RecName:
           Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor [Nicotiana sylvestris]
           gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score = 98.6 bits (244), Expect = 4e-18
 Identities = 63/143 (44%), Positives = 83/143 (58%)
 Frame = -1

Query: 430 MSNTIPPISLNINIDHLIPNPVYKPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNP 251
           MS+T  PISL I ++        KP    + P   S +MWRNI KQ SSRTP+     + 
Sbjct: 1   MSSTKTPISLTIKLNQFTD----KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSK 56

Query: 250 NSLPRAYSFLGFSRDSIFPEKFKFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTL 71
           N   R YSFLGF +DSIF +  KFR+L   SCS    +  G + +GE+   DE L RP  
Sbjct: 57  N---RTYSFLGFGQDSIFKDNTKFRSLIPISCSN---IVMGFQNLGEYLPGDEFLSRPL- 109

Query: 70  NSVRNQISINGLCQKSYASLAEA 2
             ++NQ++ N  C+KSYAS+AEA
Sbjct: 110 --IKNQVNNNFCCRKSYASVAEA 130


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
           gi|462411068|gb|EMJ16117.1| hypothetical protein
           PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score = 97.8 bits (242), Expect = 7e-18
 Identities = 55/121 (45%), Positives = 70/121 (57%)
 Frame = -1

Query: 364 YKPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNPNSLPRAYSFLGFSRDSIFPEKF 185
           + P IF   P  IST +WRN AKQA SR  +F    N  S  RAYS LG  ++S+FP  F
Sbjct: 20  HSPLIFHKNPSMISTTVWRNFAKQAISRKQRFH--INSQSFSRAYSLLGICQESVFPGNF 77

Query: 184 KFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTLNSVRNQISINGLCQKSYASLAE 5
           K    + +SCS   F E G R  G  S+ ++ + +P+  SVRN I  NG C K YAS+AE
Sbjct: 78  K--PFELSSCSSLRFSEVGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVAE 135

Query: 4   A 2
           A
Sbjct: 136 A 136


>ref|XP_008230318.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial isoform X2 [Prunus mume]
          Length = 862

 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 54/121 (44%), Positives = 69/121 (57%)
 Frame = -1

Query: 364 YKPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNPNSLPRAYSFLGFSRDSIFPEKF 185
           + P IF   P  IST +WRN AKQA SR  +F    N  S  RAYS L   ++S+FP  F
Sbjct: 20  HSPLIFHKNPSMISTTVWRNFAKQAISRKQRFH--INSQSFSRAYSLLRICQESVFPGNF 77

Query: 184 KFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTLNSVRNQISINGLCQKSYASLAE 5
           K    + +SCS   F E G R  G  S+ ++ + +P+  SVRN I  NG C K YAS+AE
Sbjct: 78  K--PFELSSCSSLRFSEVGFRGKGTISSPEDCMCKPSFWSVRNPIGFNGFCPKGYASVAE 135

Query: 4   A 2
           A
Sbjct: 136 A 136


>ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial isoform X1 [Prunus mume]
          Length = 1024

 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 54/121 (44%), Positives = 69/121 (57%)
 Frame = -1

Query: 364 YKPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNPNSLPRAYSFLGFSRDSIFPEKF 185
           + P IF   P  IST +WRN AKQA SR  +F    N  S  RAYS L   ++S+FP  F
Sbjct: 20  HSPLIFHKNPSMISTTVWRNFAKQAISRKQRFH--INSQSFSRAYSLLRICQESVFPGNF 77

Query: 184 KFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTLNSVRNQISINGLCQKSYASLAE 5
           K    + +SCS   F E G R  G  S+ ++ + +P+  SVRN I  NG C K YAS+AE
Sbjct: 78  K--PFELSSCSSLRFSEVGFRGKGTISSPEDCMCKPSFWSVRNPIGFNGFCPKGYASVAE 135

Query: 4   A 2
           A
Sbjct: 136 A 136


>ref|XP_009373754.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Pyrus x
           bretschneideri]
          Length = 1024

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 56/119 (47%), Positives = 70/119 (58%)
 Frame = -1

Query: 358 PRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNPNSLPRAYSFLGFSRDSIFPEKFKF 179
           P +F   P  IST +WRN+AKQA S   +     +  S+ RAYS L FSR+S+F EKFK 
Sbjct: 22  PIVFHKSPSMISTSLWRNLAKQAISGNQRCR--LSSQSISRAYSLLRFSRESVFSEKFK- 78

Query: 178 RTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTLNSVRNQISINGLCQKSYASLAEA 2
              +  SC   GF E G    GE S+ +  +G P+L SVRN I  NG C K YAS+AEA
Sbjct: 79  -PFETGSCL-KGFPEVGFCGKGEISSGESYMGNPSLGSVRNPIGFNGFCPKGYASIAEA 135


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
           [Nicotiana tabacum] gi|21425665|emb|CAC95020.1|
           mitochondrial and chloroplast RNA polymerase [Nicotiana
           tabacum]
          Length = 1021

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 62/144 (43%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
 Frame = -1

Query: 430 MSNTIPPISLNINIDHLIPNPVYKPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNP 251
           MS+T  PISL I ++        KP    +     S +MWRNI KQ SSRTP+     + 
Sbjct: 1   MSSTKTPISLTIKLNQFTD----KPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSK 56

Query: 250 NSLPRAYSFLGFSRDSIFPEKFKFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTL 71
           N   R YSFLGF +DS+F +  KFR+L   SCS    +  G + +GE+   DE L RP L
Sbjct: 57  N---RTYSFLGFGQDSVFKDNTKFRSLIPISCSN---IVMGFQNLGEYLPGDEFLSRPLL 110

Query: 70  NSVRNQISINGL-CQKSYASLAEA 2
              +NQ++ N   C+KSYAS+AEA
Sbjct: 111 ---KNQVNSNDFCCRKSYASVAEA 131


>ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 1021

 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 62/143 (43%), Positives = 80/143 (55%)
 Frame = -1

Query: 430 MSNTIPPISLNINIDHLIPNPVYKPRIFLLKPPEISTVMWRNIAKQASSRTPKFGSIFNP 251
           MS+T  PISL I ++        KP    +     S +MWRNI KQ SSRTP+     + 
Sbjct: 1   MSSTKTPISLTIKLNQFTD----KPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSK 56

Query: 250 NSLPRAYSFLGFSRDSIFPEKFKFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTL 71
           N   R YSFLGF +DS+F +  KFR+L   SCS    +  G + +GE+   DE L RP L
Sbjct: 57  N---RTYSFLGFGQDSVFKDNTKFRSLIPISCSN---IVMGFQNLGEYLPGDEFLSRPLL 110

Query: 70  NSVRNQISINGLCQKSYASLAEA 2
            S  N  S +  C+KSYAS+AEA
Sbjct: 111 KSQVN--SNDFCCRKSYASVAEA 131


>ref|XP_010694421.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Beta vulgaris subsp.
           vulgaris] gi|870867851|gb|KMT18720.1| hypothetical
           protein BVRB_2g028430 [Beta vulgaris subsp. vulgaris]
          Length = 1036

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 57/138 (41%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
 Frame = -1

Query: 412 PISLNINIDHLIPNPVYKPRI-FLLKPPEISTVMWRNIAKQASSRTPKFGSIFNPNSLPR 236
           P +L+   D  I   ++K R  F++ P   STVMW N AKQA SRTP+    F   SL R
Sbjct: 10  PANLSQKFDPSIQ--IHKSRSNFVINPFFNSTVMWENFAKQAISRTPRL--CFKSFSLSR 65

Query: 235 AYSFLGFSRDSIFPEKFKFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTLNSVRN 56
            YSFLG S DS+  EK KFR  +   C    F E G  + G    ++E+  RP    + N
Sbjct: 66  NYSFLGVSCDSVIAEKLKFRPFELGFCKNVNFPELGFCRKGGPLVKEEMGERPIFGCLSN 125

Query: 55  QISINGLCQKSYASLAEA 2
           Q ++  LC K YAS+ EA
Sbjct: 126 QPNLKVLCPKGYASVVEA 143


>ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Malus domestica]
          Length = 1025

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 52/115 (45%), Positives = 62/115 (53%)
 Frame = -1

Query: 349 FLLKPPEISTVMWRNIAKQASSRTPKFGSIFNPNSLPRAYSFLGFSRDSIFPEKFKFRTL 170
           F   P  IST +WRN+AKQA  R  +     N  S+ RAYS L FS +S+ P+ FK    
Sbjct: 25  FHKNPSMISTSLWRNLAKQAIPRNQR--GRLNSQSISRAYSLLCFSXESVSPQXFK--PF 80

Query: 169 DFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTLNSVRNQISINGLCQKSYASLAE 5
              S S  GF E G    GE ST +  LG P+  SVR  I  NG C K YAS+AE
Sbjct: 81  QLGSYSNMGFPEVGFPGKGEISTSESYLGNPSYWSVRTPIGFNGFCAKGYASVAE 135


>emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 1036

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
 Frame = -1

Query: 412 PISLNINIDHLIPNPVYKPRI-FLLKPPEISTVMWRNIAKQASSRTPKFGSIFNPNSLPR 236
           P  L+ N D  I   +YK R  FL+ P   ST+MWRN AKQA SRTP         S+ R
Sbjct: 10  PAVLSQNFDPYIQ--IYKSRSNFLINPCFDSTIMWRNFAKQAISRTPNL--CLRKFSISR 65

Query: 235 AYSFLGFSRDSIFPEKFKFRTLDFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTLNSVRN 56
           +YSFLG + D  F ++ KFR  +   C    F E G  + G    ++ +  RP    + N
Sbjct: 66  SYSFLGGTHDCGFSDRLKFRPFELGFCKNRSFSEVGFCREGGSLVKEGIGERPVSGCLGN 125

Query: 55  QISINGLCQKSYASLAEA 2
           +++ N +C K YAS+ EA
Sbjct: 126 RLNFNVVCPKGYASVVEA 143


>ref|XP_009378288.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Pyrus x bretschneideri]
          Length = 1025

 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 50/115 (43%), Positives = 62/115 (53%)
 Frame = -1

Query: 349 FLLKPPEISTVMWRNIAKQASSRTPKFGSIFNPNSLPRAYSFLGFSRDSIFPEKFKFRTL 170
           F   P  I T +WRN+AKQA  R  +     N  S+ RAYS LGFSR+S+ P+ FK    
Sbjct: 25  FHKNPSMIFTSLWRNLAKQAIPRNQR--GRLNSQSISRAYSLLGFSRESVSPQSFK--PF 80

Query: 169 DFNSCSGSGFLEPGLRKVGEFSTRDELLGRPTLNSVRNQISINGLCQKSYASLAE 5
              S S  GF E G    GE ST +  +G P+  SVR  I  NG   + YAS+AE
Sbjct: 81  QLGSYSNMGFPEVGFPGKGEISTGESYMGNPSYWSVRTPIGFNGFFPRGYASVAE 135