BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00012233
         (3104 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s...  1426   0.0  
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s...  1421   0.0  
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...  1408   0.0  
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s...  1402   0.0  
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...  1401   0.0  
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...  1348   0.0  
ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III s...  1320   0.0  
ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III s...  1320   0.0  
ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III s...  1319   0.0  
ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1314   0.0  
gb|KCW52757.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus g...  1314   0.0  
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...  1306   0.0  
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s...  1305   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...  1304   0.0  
ref|XP_010092991.1| DNA-directed RNA polymerase III subunit RPC1...  1304   0.0  
ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1304   0.0  
ref|XP_012854429.1| PREDICTED: DNA-directed RNA polymerase III s...  1300   0.0  
ref|XP_012854428.1| PREDICTED: DNA-directed RNA polymerase III s...  1300   0.0  
gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Erythra...  1300   0.0  
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...  1299   0.0  

>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
            DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris]
          Length = 1390

 Score = 1426 bits (3692), Expect = 0.0
 Identities = 727/967 (75%), Positives = 807/967 (83%), Gaps = 9/967 (0%)
 Frame = -1

Query: 3104 EISLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRF 2925
            EISL FSSRKRHADELKFGYIVDRHLEDGD++LFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 425  EISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 484

Query: 2924 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTS 2772
            NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG         +GEILVASTQDFLTS
Sbjct: 485  NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTS 544

Query: 2771 SFLITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKM 2592
            SFLITRKDTFYDRASFSL+CSYMGDGMD IDLPTPAL+KPVELWTGKQLF VLLRP++KM
Sbjct: 545  SFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGVLLRPYSKM 604

Query: 2591 KVYLNLTVTEKNYQKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 2412
            +VY+NLTVTEK+Y    ETMC +DGFV FRNSELISGQLGKATLGNGNKDGLYSVLLRDY
Sbjct: 605  RVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 664

Query: 2411 NPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKY 2232
              HAA+ CMNRLAKLSARWIGNHGFSIGIDDV P + L+  K E+I   Y KC++ IQ++
Sbjct: 665  KSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQEEIYQNYKKCEDRIQQF 724

Query: 2231 NKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPIN 2052
            N+G+L +QPG DAA TLEA++T  LN +RD   K C+  LHWRNSPLIM+QCGSKGSPIN
Sbjct: 725  NEGKLAVQPGCDAAQTLEAEVTMALNKVRDDIGKICMKALHWRNSPLIMSQCGSKGSPIN 784

Query: 2051 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHT 1872
            ISQM+ACVGQQSVGGRRAP+GFIDRSLPHFP KSK P A+GFVA+SF+ GL+ATEFFFHT
Sbjct: 785  ISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATEFFFHT 844

Query: 1871 MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQ 1692
            MGGREGLVDTAVKTADTGYMSRRLMKALEDL+++YDNTVRNAS+ I+QF+YGDDGMD SQ
Sbjct: 845  MGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASASIIQFMYGDDGMDPSQ 904

Query: 1691 MEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEAFRD 1512
            MEEK G PLNF RL MKVKATCP   +K LS S+IC+  +ERLS  DM+PEGGCSEAFR 
Sbjct: 905  MEEKKGRPLNFSRLFMKVKATCPPRGEKGLSYSEICEIVNERLSYHDMSPEGGCSEAFRA 964

Query: 1511 SLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRVCIS 1332
            SLS FL     E+LK+  E L   E+Q     +            IT +QL+VFL +CIS
Sbjct: 965  SLSDFLIKNLAETLKRLREALLLGEEQYAGGDREYLENVALNISGITKKQLQVFLNMCIS 1024

Query: 1331 RYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRI 1152
            RYH K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK+I
Sbjct: 1025 RYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKI 1084

Query: 1151 STPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEIIQAS 972
            +TPII+AKL    +   A + KARIEKTLLGQVAK +KIVM++RLASI ITLDME IQ S
Sbjct: 1085 NTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIAITLDMETIQVS 1144

Query: 971  RLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFELHTLKNKLPSVV 792
            +LC DAY VK+SILQTP+IKLK+Q VKVLN RKLEV PQ +K KLHFELH LKNKLP+VV
Sbjct: 1145 QLCIDAYTVKQSILQTPKIKLKEQQVKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVV 1204

Query: 791  VTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSNHIME 612
            V GI T++R V+NKE+E+D  +    G  Y L  EGTGLL VMG +GV+G  TKSNHIME
Sbjct: 1205 VKGITTVQRAVVNKEQERDR-KSDVKGETYELLVEGTGLLAVMGIDGVDGRNTKSNHIME 1263

Query: 611  VQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKD 432
            VQQ LGIEAAR SIIDEI +TMSSHGMTID+RHMMLLADLMT+KGEVLGITRHGVQKMKD
Sbjct: 1264 VQQRLGIEAARISIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 1323

Query: 431  SVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQQVELNY 252
            SVLMLASFEKT DHLF+ASVNGRDDKIEGVSECIIMGIPMQIGTGM K+RQ VQQVELNY
Sbjct: 1324 SVLMLASFEKTTDHLFSASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVQQVELNY 1383

Query: 251  GLDPILS 231
              +P+LS
Sbjct: 1384 QSEPMLS 1390


>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Nicotiana tomentosiformis]
            gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 1390

 Score = 1421 bits (3679), Expect = 0.0
 Identities = 727/967 (75%), Positives = 806/967 (83%), Gaps = 9/967 (0%)
 Frame = -1

Query: 3104 EISLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRF 2925
            EISL FSSRKRHADELKFGYIVDRHLEDGD++LFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 425  EISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 484

Query: 2924 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTS 2772
            NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG         +GEILVASTQDFLTS
Sbjct: 485  NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTS 544

Query: 2771 SFLITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKM 2592
            SFLITRKDTFY+RASFSL+CSYMGDGMD IDLPTPAL+KPVELWTGKQLF VLLRP++KM
Sbjct: 545  SFLITRKDTFYERASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGVLLRPYSKM 604

Query: 2591 KVYLNLTVTEKNYQKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 2412
            +VY+NLTVTEK+Y    ETMC +DGFV FRNSELISGQLGKATLGNGNKDGLYSVLLRDY
Sbjct: 605  RVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 664

Query: 2411 NPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKY 2232
              HAA+ CMNRLAKLSARWIGNHGFSIGIDDV P + L+  K E+I   Y KC++ IQ++
Sbjct: 665  KSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGEILVKQKLEEIHQNYKKCEDRIQQF 724

Query: 2231 NKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPIN 2052
            N+G+L +QPG DAA TLEA++T  LN +RD   K C+  LHWRNSPLIM+QCGSKGSPIN
Sbjct: 725  NEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALHWRNSPLIMSQCGSKGSPIN 784

Query: 2051 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHT 1872
            ISQM+ACVGQQSVGGRRAP+GFIDRSLPHFP KSK P A+GFVA+SF+ GL+ATEFFFHT
Sbjct: 785  ISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATEFFFHT 844

Query: 1871 MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQ 1692
            MGGREGLVDTAVKTADTGYMSRRLMKALEDL+++YDNTVRNAS+ I+QF+YGDDGMD SQ
Sbjct: 845  MGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASTSIIQFMYGDDGMDPSQ 904

Query: 1691 MEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEAFRD 1512
            MEEK G PLNF RL MKVKATCP   +KSLS S+IC+  +ERLS  DM+PEGGCSEAFR 
Sbjct: 905  MEEKKGRPLNFSRLFMKVKATCPPRGEKSLSYSEICEIVNERLSYHDMSPEGGCSEAFRA 964

Query: 1511 SLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRVCIS 1332
            SLS FL     E+LK+  E L    +Q     +            IT +QL+VFL +CIS
Sbjct: 965  SLSDFLIKHLAETLKRLREALLLDGEQYAGGDREYLENIALNISGITKKQLQVFLNMCIS 1024

Query: 1331 RYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRI 1152
            RYH K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK+I
Sbjct: 1025 RYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKI 1084

Query: 1151 STPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEIIQAS 972
            +TPII+AKL    +   A + KARIEKTLLGQVAK +KIVM++RLASI ITLDME IQ S
Sbjct: 1085 NTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIAITLDMETIQVS 1144

Query: 971  RLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFELHTLKNKLPSVV 792
            +LC DAY VK+SILQTP+IKLK+Q VKVLN RKLEV PQ +K KLHFELH LKNKLP VV
Sbjct: 1145 QLCIDAYTVKQSILQTPKIKLKEQQVKVLNHRKLEVFPQANKDKLHFELHRLKNKLPVVV 1204

Query: 791  VTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSNHIME 612
            V GI T++R V+NKE+E+D  +    G  Y L  EGTGLL VMG +GV+G  TKSNHIME
Sbjct: 1205 VKGITTVQRAVVNKEQERDR-KSDVKGETYELLVEGTGLLAVMGIDGVDGRNTKSNHIME 1263

Query: 611  VQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKD 432
            VQQ LGIEAAR SIIDEI +TMSSHGMTID+RHMMLLADLMT+KGEVLGITRHGVQKMKD
Sbjct: 1264 VQQRLGIEAARISIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 1323

Query: 431  SVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQQVELNY 252
            SVLMLASFEKT DHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGM K+RQ VQQVELNY
Sbjct: 1324 SVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVQQVELNY 1383

Query: 251  GLDPILS 231
              +P+LS
Sbjct: 1384 QSEPMLS 1390


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score = 1408 bits (3645), Expect = 0.0
 Identities = 717/966 (74%), Positives = 800/966 (82%), Gaps = 9/966 (0%)
 Frame = -1

Query: 3104 EISLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRF 2925
            EISL F+SRKRHADELKFGYIVDRHLEDGD++LFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 424  EISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 483

Query: 2924 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTS 2772
            NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG         +GEILVASTQDFLTS
Sbjct: 484  NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTS 543

Query: 2771 SFLITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKM 2592
            SFLITRKDTFY+RASFSL+CSYMGD MD  DLP+PA +KPVELWTGKQLF +LLRP++KM
Sbjct: 544  SFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRPYSKM 603

Query: 2591 KVYLNLTVTEKNYQKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 2412
            +VY+NLTVTEK+Y    ETMC +DGFV FRNSELISGQLGKATLGNGNKDGLYSVLLRDY
Sbjct: 604  RVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 663

Query: 2411 NPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKY 2232
              HAA+ CMNRLAKLSARWIGNHGFSIGIDDV P + L+  K  +I   Y KC++ I ++
Sbjct: 664  KSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQF 723

Query: 2231 NKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPIN 2052
            N+G+L +QPG DAA TLEA++T  LN +RD   K C+  L WRNSPLIM+QCGSKGSPIN
Sbjct: 724  NEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPIN 783

Query: 2051 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHT 1872
            ISQM+ACVGQQSVGGRRAP+GFIDRSLPHFP KSK P A+GFVA+SF+ GL+ATEFFFHT
Sbjct: 784  ISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFHT 843

Query: 1871 MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQ 1692
            MGGREGLVDTAVKTADTGYMSRRLMKALEDL+++YD+TVRNAS+CIVQF+YGDDGMD SQ
Sbjct: 844  MGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPSQ 903

Query: 1691 MEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEAFRD 1512
            MEEK G PLNF RL MKVKATCP G +KSLS S+IC+  +ERLS  DMTPEGGCSEAFR 
Sbjct: 904  MEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRS 963

Query: 1511 SLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRVCIS 1332
            SLS FL     E+LK   E+L   E+Q   D +            IT RQL+VFL  CIS
Sbjct: 964  SLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQVFLNTCIS 1023

Query: 1331 RYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRI 1152
            RYH K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK+I
Sbjct: 1024 RYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKI 1083

Query: 1151 STPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEIIQAS 972
            +TPII+ KL    +   A + KARIEKTLLGQVAK +KIV+++RLASI I+LDME IQ S
Sbjct: 1084 TTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVS 1143

Query: 971  RLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFELHTLKNKLPSVV 792
            +LC DAY VK+SILQT +IKLK+  +KVLN RKLEV PQ +K KLHFELH LKNKLP+VV
Sbjct: 1144 QLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVV 1203

Query: 791  VTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSNHIME 612
            V GI T++R V+NKE++KD  +    G  Y L  EGTGLL VMG EGV+G  TKSNHIME
Sbjct: 1204 VKGITTVQRAVVNKEQQKDR-KNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIME 1262

Query: 611  VQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKD 432
            VQ TLGIEAAR SIIDEI +TMSSHGMTID+RHMMLLADLMT+KGEVLGITRHGVQKMKD
Sbjct: 1263 VQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 1322

Query: 431  SVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQQVELNY 252
            SVLMLASFEKT DHLFNASVNGRDDKIEGV+ECIIMGIPM IGTGM K+RQRV+QVELNY
Sbjct: 1323 SVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRVEQVELNY 1382

Query: 251  GLDPIL 234
              DPI+
Sbjct: 1383 QPDPII 1388


>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Nicotiana tomentosiformis]
            gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 1375

 Score = 1402 bits (3628), Expect = 0.0
 Identities = 716/951 (75%), Positives = 793/951 (83%), Gaps = 9/951 (0%)
 Frame = -1

Query: 3104 EISLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRF 2925
            EISL FSSRKRHADELKFGYIVDRHLEDGD++LFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 425  EISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 484

Query: 2924 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTS 2772
            NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG         +GEILVASTQDFLTS
Sbjct: 485  NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTS 544

Query: 2771 SFLITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKM 2592
            SFLITRKDTFY+RASFSL+CSYMGDGMD IDLPTPAL+KPVELWTGKQLF VLLRP++KM
Sbjct: 545  SFLITRKDTFYERASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGVLLRPYSKM 604

Query: 2591 KVYLNLTVTEKNYQKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 2412
            +VY+NLTVTEK+Y    ETMC +DGFV FRNSELISGQLGKATLGNGNKDGLYSVLLRDY
Sbjct: 605  RVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 664

Query: 2411 NPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKY 2232
              HAA+ CMNRLAKLSARWIGNHGFSIGIDDV P + L+  K E+I   Y KC++ IQ++
Sbjct: 665  KSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGEILVKQKLEEIHQNYKKCEDRIQQF 724

Query: 2231 NKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPIN 2052
            N+G+L +QPG DAA TLEA++T  LN +RD   K C+  LHWRNSPLIM+QCGSKGSPIN
Sbjct: 725  NEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALHWRNSPLIMSQCGSKGSPIN 784

Query: 2051 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHT 1872
            ISQM+ACVGQQSVGGRRAP+GFIDRSLPHFP KSK P A+GFVA+SF+ GL+ATEFFFHT
Sbjct: 785  ISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATEFFFHT 844

Query: 1871 MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQ 1692
            MGGREGLVDTAVKTADTGYMSRRLMKALEDL+++YDNTVRNAS+ I+QF+YGDDGMD SQ
Sbjct: 845  MGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASTSIIQFMYGDDGMDPSQ 904

Query: 1691 MEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEAFRD 1512
            MEEK G PLNF RL MKVKATCP   +KSLS S+IC+  +ERLS  DM+PEGGCSEAFR 
Sbjct: 905  MEEKKGRPLNFSRLFMKVKATCPPRGEKSLSYSEICEIVNERLSYHDMSPEGGCSEAFRA 964

Query: 1511 SLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRVCIS 1332
            SLS FL     E+LK+  E L    +Q     +            IT +QL+VFL +CIS
Sbjct: 965  SLSDFLIKHLAETLKRLREALLLDGEQYAGGDREYLENIALNISGITKKQLQVFLNMCIS 1024

Query: 1331 RYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRI 1152
            RYH K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK+I
Sbjct: 1025 RYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKI 1084

Query: 1151 STPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEIIQAS 972
            +TPII+AKL    +   A + KARIEKTLLGQVAK +KIVM++RLASI ITLDME IQ S
Sbjct: 1085 NTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIAITLDMETIQVS 1144

Query: 971  RLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFELHTLKNKLPSVV 792
            +LC DAY VK+SILQTP+IKLK+Q VKVLN RKLEV PQ +K KLHFELH LKNKLP VV
Sbjct: 1145 QLCIDAYTVKQSILQTPKIKLKEQQVKVLNHRKLEVFPQANKDKLHFELHRLKNKLPVVV 1204

Query: 791  VTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSNHIME 612
            V GI T++R V+NKE+E+D  +    G  Y L  EGTGLL VMG +GV+G  TKSNHIME
Sbjct: 1205 VKGITTVQRAVVNKEQERDR-KSDVKGETYELLVEGTGLLAVMGIDGVDGRNTKSNHIME 1263

Query: 611  VQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKD 432
            VQQ LGIEAAR SIIDEI +TMSSHGMTID+RHMMLLADLMT+KGEVLGITRHGVQKMKD
Sbjct: 1264 VQQRLGIEAARISIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 1323

Query: 431  SVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQ 279
            SVLMLASFEKT DHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGM K+RQ
Sbjct: 1324 SVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQ 1374


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Solanum
            lycopersicum]
          Length = 1390

 Score = 1401 bits (3627), Expect = 0.0
 Identities = 713/966 (73%), Positives = 800/966 (82%), Gaps = 9/966 (0%)
 Frame = -1

Query: 3104 EISLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRF 2925
            E+SL FSSRKR+ADELKFGYIVDRHLEDGD++LFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 424  EMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 483

Query: 2924 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTS 2772
            NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG         +GEILVASTQDFLTS
Sbjct: 484  NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDFLTS 543

Query: 2771 SFLITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKM 2592
            SFLITRKDTFY+RASFSL+CSYMGD MD  DLP+PA +KPVELWTGKQLF VLLRP++KM
Sbjct: 544  SFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHVLLRPYSKM 603

Query: 2591 KVYLNLTVTEKNYQKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 2412
            +VY+NLT+TEK+Y    ETMC +DGFV FRNSELISGQLGKATLGNGNKDGLYSVLLRDY
Sbjct: 604  RVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 663

Query: 2411 NPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKY 2232
              HAA+ CMNRLAKLSARWIGNHGFSIGIDDV P + L+  K  +I   Y KC++ I ++
Sbjct: 664  ESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCITQF 723

Query: 2231 NKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPIN 2052
            N+G+L +QPG DAA TLEA++T  LN +RD   K C+  L WRNSPLIM+QCGSKGSPIN
Sbjct: 724  NEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGSPIN 783

Query: 2051 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHT 1872
            ISQM+ACVGQQSVGGRRAP+GFIDRSLPHFP KSK P A+GFVA+SF+ GL+ATEFFFHT
Sbjct: 784  ISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFFFHT 843

Query: 1871 MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQ 1692
            MGGREGLVDTAVKTADTGYMSRRLMKALEDL+++YD+TVRNAS+CIVQF+YGDDGMD S+
Sbjct: 844  MGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMDPSR 903

Query: 1691 MEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEAFRD 1512
            MEEK G PLNF RL MKVKATCP G +KSLS S+IC+  +ERLS  DMTPEGGCSEAFR 
Sbjct: 904  MEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRA 963

Query: 1511 SLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRVCIS 1332
            SLS FL     E+LK   E+L   E+Q   D +            IT +QL+VFL  CIS
Sbjct: 964  SLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISGITKKQLQVFLNTCIS 1023

Query: 1331 RYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRI 1152
            RYH K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK+I
Sbjct: 1024 RYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKI 1083

Query: 1151 STPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEIIQAS 972
            +TPII+AKL    +   A + KARIEKTLLGQVAK +KIV+++RLASI I+LDME IQ S
Sbjct: 1084 TTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVS 1143

Query: 971  RLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFELHTLKNKLPSVV 792
            +LC DAY VK+SILQT +IKLK+  +KVLN RKLEV PQ +K KLHFELH LKNKLP+VV
Sbjct: 1144 QLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVV 1203

Query: 791  VTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSNHIME 612
            V GI T++R V+NKE++KD  +    G  Y L  EGTGLL VMG EGV+G  TKSNHIME
Sbjct: 1204 VKGITTVQRAVVNKEQQKDR-KNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIME 1262

Query: 611  VQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKD 432
            VQ TLGIEAAR SIIDEI +TMSSHGMTID+RHMMLLADLMT+KGEVLGITRHGVQKMKD
Sbjct: 1263 VQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 1322

Query: 431  SVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQQVELNY 252
            SVLMLASFEKT DHLFNASVNGRDDKIEGV+ECIIMGIPM IGTGM K+RQRV+ VELNY
Sbjct: 1323 SVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRVEHVELNY 1382

Query: 251  GLDPIL 234
              DP++
Sbjct: 1383 QPDPMM 1388


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
            vinifera]
          Length = 1383

 Score = 1348 bits (3488), Expect = 0.0
 Identities = 706/968 (72%), Positives = 791/968 (81%), Gaps = 12/968 (1%)
 Frame = -1

Query: 3098 SLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFNE 2919
            SL FS RKR ADELK+GYIV+RHLEDGDV+LFNRQPSLHRMSIMCHRARIMPWRTLRFNE
Sbjct: 429  SLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 488

Query: 2918 SVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTSSF 2766
            SVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG         NGEILVASTQDFLTSSF
Sbjct: 489  SVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 548

Query: 2765 LITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKMKV 2586
            LITRKDTFYDRA+FSLMCSYMGDGMD +DLPTPA++KPVELWTGKQLF VLLRP A ++V
Sbjct: 549  LITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRPHANVRV 608

Query: 2585 YLNLTVTEKNYQKP--EETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 2412
            YLNLTV EK Y K   +ETMC +DGFV FRNSELISGQLGKATLGNGNKDGL+SVLLRDY
Sbjct: 609  YLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDY 668

Query: 2411 NPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKY 2232
            N HAA+ CMNRLAKLSARWIGNHGFSIGIDDVQP   L   K ++I  GY  C ELIQ+Y
Sbjct: 669  NAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQY 728

Query: 2231 NKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPIN 2052
            NKG+L+LQPG +AA TLEA+IT VLN IR+  A  C+  LHWRNSPLIM+QCGSKGSPIN
Sbjct: 729  NKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGSPIN 788

Query: 2051 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHT 1872
            ISQM+ACVGQQSVGGRRAP+GFIDR+LPHFPRKSK P A+GFVA+SFY+GLTATEFFFHT
Sbjct: 789  ISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATEFFFHT 848

Query: 1871 MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQ 1692
            MGGREGLVDTAVKTADTGYMSRRLMKALEDLSI YD TVRNA+  IVQF+YGDDGMD ++
Sbjct: 849  MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDGMDPAR 908

Query: 1691 MEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEAFRD 1512
            ME K G PLNF+RL +KVKATCPAG+  SLS   I ++T +RL E + + E GCS+AF+ 
Sbjct: 909  MEGKDGFPLNFNRLFLKVKATCPAGENASLSALQI-EETVKRLKEHNTSAE-GCSDAFKT 966

Query: 1511 SLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRVCIS 1332
            +LS FL+ +C E  K T E L    +  GE+              ITS+QL+VFL  CIS
Sbjct: 967  NLSGFLE-ECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQVFLDTCIS 1025

Query: 1331 RYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRI 1152
            RY  K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AKRI
Sbjct: 1026 RYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRI 1085

Query: 1151 STPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEIIQAS 972
            STPII+A LE  ++ K A + K RIE+T LGQVAK IKIV+++RLA I + LDME IQAS
Sbjct: 1086 STPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQAS 1145

Query: 971  RLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFELHTLKNKLPSVV 792
            +L  D+  V+ESIL+  RIKLK QH+KVL++ KLEV PQ D+S +HFELH LKN LP+VV
Sbjct: 1146 QLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKNLLPTVV 1205

Query: 791  VTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSNHIME 612
            V GI T+ER VINK          D+  KY L  EGTGL  VMGTEGV G ET SNHI+E
Sbjct: 1206 VKGIETVERAVINK----------DNKVKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIE 1255

Query: 611  VQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKD 432
            VQQTLGIEAAR  II+EI++TM+SHGM+IDIRHMMLLADLMTF+GEVLGITR G+QKM  
Sbjct: 1256 VQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDK 1315

Query: 431  SVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQQV-ELN 255
            SVLMLASFEKTADHLFNASV+GRDDKIEGVSECIIMGIPMQ+GTG+LKVRQR+QQV EL+
Sbjct: 1316 SVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVPELS 1375

Query: 254  YGLDPILS 231
            YGLDPI+S
Sbjct: 1376 YGLDPIIS 1383


>ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Gossypium raimondii]
          Length = 1395

 Score = 1320 bits (3415), Expect = 0.0
 Identities = 684/971 (70%), Positives = 779/971 (80%), Gaps = 21/971 (2%)
 Frame = -1

Query: 3080 RKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY 2901
            RKR ADELKFG IVDRHLEDGD++LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY
Sbjct: 433  RKRLADELKFGCIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY 492

Query: 2900 NADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTSSFLITRKD 2748
            NADFDGDEMNMHVPQTEEARTEALMLMG         NGE+LVASTQDFLTSSFLITR+D
Sbjct: 493  NADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEVLVASTQDFLTSSFLITRRD 552

Query: 2747 TFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKMKVYLNLTV 2568
            TFYDRA+FSL+CSYMGD MD IDLPTP LLKPVELWTGKQLF VLLRP A ++VYLNLTV
Sbjct: 553  TFYDRATFSLICSYMGDAMDLIDLPTPTLLKPVELWTGKQLFNVLLRPHASVRVYLNLTV 612

Query: 2567 TEKNYQKP-----------EETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLL 2421
             E+NY +             ETMC NDGFV  RNSEL+ GQLGKATLGNGNKDGLYS+LL
Sbjct: 613  KERNYSRKIAKRIGDKEIEVETMCPNDGFVYIRNSELLCGQLGKATLGNGNKDGLYSILL 672

Query: 2420 RDYNPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELI 2241
            RDYN HAA+ CMNRLAK+SARWIGNHGFSIGIDDVQP  RL  AK   +SG Y KCDE I
Sbjct: 673  RDYNAHAAATCMNRLAKMSARWIGNHGFSIGIDDVQPGKRLNDAKGVTLSGNYKKCDEQI 732

Query: 2240 QKYNKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGS 2061
            Q +N+G+L+L+PG DAA TLEA IT+VLN IRD   K C+  LHWRNSPLIM+QCGSKGS
Sbjct: 733  QMFNEGKLQLKPGCDAAQTLEANITEVLNKIRDETGKVCMRELHWRNSPLIMSQCGSKGS 792

Query: 2060 PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFF 1881
             INISQM+ACVGQQSVGGRRAPNGFIDRSLPHF R SK P A+GFVANSFYSGLTATEFF
Sbjct: 793  AINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFF 852

Query: 1880 FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMD 1701
            FHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDLSIHYDNT RNAS CIVQF+YGDDGMD
Sbjct: 853  FHTMGGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTCRNASGCIVQFIYGDDGMD 912

Query: 1700 SSQMEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEA 1521
             + ME KSG PLNFDRLLMKVKATCP  DQK L    I +  +E++ + D  P+G CSEA
Sbjct: 913  PASMEGKSGFPLNFDRLLMKVKATCPPVDQKYLPADAIPQMLEEQVVKHD--PDGVCSEA 970

Query: 1520 FRDSLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRV 1341
            F+ SL  FL+ +  E LK+ ++ +          +             IT RQLEVF+R+
Sbjct: 971  FKKSLKGFLEGQKNE-LKRVMQLV-----SNSAQKSEILEDVSHKICGITDRQLEVFIRI 1024

Query: 1340 CISRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA 1161
            CI RY +K                GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIINAA
Sbjct: 1025 CIGRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAA 1084

Query: 1160 KRISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEII 981
            K+ISTPII+A+LE + +  VA + K RIEKT+LGQVAK IKIVM++RLAS+VI+LDME I
Sbjct: 1085 KKISTPIITAELEFDSNVNVARMVKGRIEKTVLGQVAKSIKIVMTSRLASVVISLDMERI 1144

Query: 980  QASRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFELHTLKNKLP 801
            Q ++L  DA  VKESILQTP++KLK+QHVKVL+ +KLEVVP  D+S++HFELH+LKN LP
Sbjct: 1145 QDAQLHIDANVVKESILQTPKLKLKEQHVKVLDVKKLEVVPPADRSRIHFELHSLKNLLP 1204

Query: 800  SVVVTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSNH 621
             VVV GI T+ERVVI ++++ +  +  ++   Y LF EG GL  VMG EG++G +T SNH
Sbjct: 1205 LVVVKGIKTVERVVIAEKKKDNKSQNKEAKKLYQLFVEGMGLQTVMGVEGIDGRKTMSNH 1264

Query: 620  IMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQK 441
            +ME+ Q LGIEAARS II+EI  TM+SHGM+IDIRHMMLL D+MTF+GEVLGITR G+QK
Sbjct: 1265 VMEMLQILGIEAARSCIINEIAATMASHGMSIDIRHMMLLGDVMTFRGEVLGITRFGIQK 1324

Query: 440  MKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQQVE 261
            M  S+LMLASFEKT DHLFNASVNGRDDKIEGV+ECIIMGIPMQ+GTG+LKV QRV  + 
Sbjct: 1325 MDKSILMLASFEKTGDHLFNASVNGRDDKIEGVTECIIMGIPMQLGTGILKVMQRVDPLP 1384

Query: 260  -LNYGLDPILS 231
             L YG DP+LS
Sbjct: 1385 LLQYGADPVLS 1395


>ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Gossypium raimondii] gi|763752836|gb|KJB20224.1|
            hypothetical protein B456_003G139100 [Gossypium
            raimondii]
          Length = 1398

 Score = 1320 bits (3415), Expect = 0.0
 Identities = 684/971 (70%), Positives = 779/971 (80%), Gaps = 21/971 (2%)
 Frame = -1

Query: 3080 RKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY 2901
            RKR ADELKFG IVDRHLEDGD++LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY
Sbjct: 436  RKRLADELKFGCIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY 495

Query: 2900 NADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTSSFLITRKD 2748
            NADFDGDEMNMHVPQTEEARTEALMLMG         NGE+LVASTQDFLTSSFLITR+D
Sbjct: 496  NADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEVLVASTQDFLTSSFLITRRD 555

Query: 2747 TFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKMKVYLNLTV 2568
            TFYDRA+FSL+CSYMGD MD IDLPTP LLKPVELWTGKQLF VLLRP A ++VYLNLTV
Sbjct: 556  TFYDRATFSLICSYMGDAMDLIDLPTPTLLKPVELWTGKQLFNVLLRPHASVRVYLNLTV 615

Query: 2567 TEKNYQKP-----------EETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLL 2421
             E+NY +             ETMC NDGFV  RNSEL+ GQLGKATLGNGNKDGLYS+LL
Sbjct: 616  KERNYSRKIAKRIGDKEIEVETMCPNDGFVYIRNSELLCGQLGKATLGNGNKDGLYSILL 675

Query: 2420 RDYNPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELI 2241
            RDYN HAA+ CMNRLAK+SARWIGNHGFSIGIDDVQP  RL  AK   +SG Y KCDE I
Sbjct: 676  RDYNAHAAATCMNRLAKMSARWIGNHGFSIGIDDVQPGKRLNDAKGVTLSGNYKKCDEQI 735

Query: 2240 QKYNKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGS 2061
            Q +N+G+L+L+PG DAA TLEA IT+VLN IRD   K C+  LHWRNSPLIM+QCGSKGS
Sbjct: 736  QMFNEGKLQLKPGCDAAQTLEANITEVLNKIRDETGKVCMRELHWRNSPLIMSQCGSKGS 795

Query: 2060 PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFF 1881
             INISQM+ACVGQQSVGGRRAPNGFIDRSLPHF R SK P A+GFVANSFYSGLTATEFF
Sbjct: 796  AINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFF 855

Query: 1880 FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMD 1701
            FHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDLSIHYDNT RNAS CIVQF+YGDDGMD
Sbjct: 856  FHTMGGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTCRNASGCIVQFIYGDDGMD 915

Query: 1700 SSQMEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEA 1521
             + ME KSG PLNFDRLLMKVKATCP  DQK L    I +  +E++ + D  P+G CSEA
Sbjct: 916  PASMEGKSGFPLNFDRLLMKVKATCPPVDQKYLPADAIPQMLEEQVVKHD--PDGVCSEA 973

Query: 1520 FRDSLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRV 1341
            F+ SL  FL+ +  E LK+ ++ +          +             IT RQLEVF+R+
Sbjct: 974  FKKSLKGFLEGQKNE-LKRVMQLV-----SNSAQKSEILEDVSHKICGITDRQLEVFIRI 1027

Query: 1340 CISRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA 1161
            CI RY +K                GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIINAA
Sbjct: 1028 CIGRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAA 1087

Query: 1160 KRISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEII 981
            K+ISTPII+A+LE + +  VA + K RIEKT+LGQVAK IKIVM++RLAS+VI+LDME I
Sbjct: 1088 KKISTPIITAELEFDSNVNVARMVKGRIEKTVLGQVAKSIKIVMTSRLASVVISLDMERI 1147

Query: 980  QASRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFELHTLKNKLP 801
            Q ++L  DA  VKESILQTP++KLK+QHVKVL+ +KLEVVP  D+S++HFELH+LKN LP
Sbjct: 1148 QDAQLHIDANVVKESILQTPKLKLKEQHVKVLDVKKLEVVPPADRSRIHFELHSLKNLLP 1207

Query: 800  SVVVTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSNH 621
             VVV GI T+ERVVI ++++ +  +  ++   Y LF EG GL  VMG EG++G +T SNH
Sbjct: 1208 LVVVKGIKTVERVVIAEKKKDNKSQNKEAKKLYQLFVEGMGLQTVMGVEGIDGRKTMSNH 1267

Query: 620  IMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQK 441
            +ME+ Q LGIEAARS II+EI  TM+SHGM+IDIRHMMLL D+MTF+GEVLGITR G+QK
Sbjct: 1268 VMEMLQILGIEAARSCIINEIAATMASHGMSIDIRHMMLLGDVMTFRGEVLGITRFGIQK 1327

Query: 440  MKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQQVE 261
            M  S+LMLASFEKT DHLFNASVNGRDDKIEGV+ECIIMGIPMQ+GTG+LKV QRV  + 
Sbjct: 1328 MDKSILMLASFEKTGDHLFNASVNGRDDKIEGVTECIIMGIPMQLGTGILKVMQRVDPLP 1387

Query: 260  -LNYGLDPILS 231
             L YG DP+LS
Sbjct: 1388 LLQYGADPVLS 1398


>ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Sesamum
            indicum]
          Length = 1405

 Score = 1319 bits (3413), Expect = 0.0
 Identities = 702/988 (71%), Positives = 779/988 (78%), Gaps = 31/988 (3%)
 Frame = -1

Query: 3104 EISLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRF 2925
            EISL FSSRKRHADELK+GYIVDRHLEDGD++LFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 428  EISLMFSSRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 487

Query: 2924 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTS 2772
            NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG         NGEILVASTQDFLTS
Sbjct: 488  NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 547

Query: 2771 SFLITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKM 2592
            SFLITRKDTFYDRASFSLMCSYMGD MD IDLPTPAL+KPVELWTGKQLF+VLLRP AKM
Sbjct: 548  SFLITRKDTFYDRASFSLMCSYMGDAMDPIDLPTPALVKPVELWTGKQLFSVLLRPHAKM 607

Query: 2591 KVYLNLTVTEKNYQKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 2412
            +VYLNLTV EK+Y K  ETMC  DGFV  RNSELISGQLGKAT+GNG+KDGLYSVLLRDY
Sbjct: 608  RVYLNLTVAEKSYGKSRETMCPKDGFVYIRNSELISGQLGKATVGNGSKDGLYSVLLRDY 667

Query: 2411 NPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKY 2232
            + HAA+ CMNRLAKLSARWIGNHGFSIGI+DV P D L   K   I   Y +C + I+ Y
Sbjct: 668  SAHAAATCMNRLAKLSARWIGNHGFSIGINDVTPGDVLNKEKKLTIDKEYGQCTDYIESY 727

Query: 2231 NKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPIN 2052
            N G+LEL PG + A TLEAKIT  LN+IR+  A  C+  L+WRNSPLIM+QCGSKGSPIN
Sbjct: 728  NSGKLELLPGCNRAETLEAKITGTLNNIRERTANVCMKNLNWRNSPLIMSQCGSKGSPIN 787

Query: 2051 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHT 1872
            I QM+ACVGQQSVGGRRAPNGF+DR+LPHF R +K P A+GFV NSFY+GL+ATEFFFHT
Sbjct: 788  ICQMIACVGQQSVGGRRAPNGFVDRTLPHFERGAKDPDAKGFVQNSFYTGLSATEFFFHT 847

Query: 1871 MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQ 1692
            MGGREGLVDTAVKTADTGYMSRRLMKALEDLS+ YDNTVRNAS  IVQFVYG DGMD +Q
Sbjct: 848  MGGREGLVDTAVKTADTGYMSRRLMKALEDLSVQYDNTVRNASGSIVQFVYGGDGMDPAQ 907

Query: 1691 MEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSER----DMTPEGGC-- 1530
            MEEKSG PLNF+RL MK KATCPA ++KSL+  +I K  +E + ER     M  E  C  
Sbjct: 908  MEEKSGLPLNFERLFMKAKATCPAAEEKSLNTEEIKKIVNEMIEERLPKSTMDLEEECLK 967

Query: 1529 ------SEAFRDSLSKFLKVKCVESLKKTIETLEPPED---------QQGEDQKXXXXXX 1395
                  + + +++L  F K     SLK  IE   P  D           GEDQ       
Sbjct: 968  DPPPSDTPSKKETLETFDK-----SLKSFIEKKHPSSDLMLKLNEGGYSGEDQ-VSLEKL 1021

Query: 1394 XXXXXXITSRQLEVFLRVCISRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVA 1215
                  IT  QL VFL  CI+RY++K                GEPGTQMTLKTFHFAGVA
Sbjct: 1022 ASNVSGITRNQLVVFLETCITRYNSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVA 1081

Query: 1214 SMNVTLGVPRIKEIINAAKRISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKI 1035
            SMNVTLGVPRIKEIINAAKRI+TPII+  L+   +  +A L K RIEKTLL QVAK IK 
Sbjct: 1082 SMNVTLGVPRIKEIINAAKRINTPIITTALQSNDNDIIAKLVKGRIEKTLLEQVAKSIKT 1141

Query: 1034 VMSARLASIVITLDMEIIQASRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQ 855
              ++R ASIVITLDM+ IQ ++L  DAY VKES+LQTPR+KLK+Q VKVLN RKLEVV Q
Sbjct: 1142 SQASRSASIVITLDMKRIQGAQLSIDAYTVKESVLQTPRMKLKEQQVKVLNPRKLEVVLQ 1201

Query: 854  TDKSKLHFELHTLKNKLPSVVVTGINTIERVVI-NKEEEKDSGEVPDSGPKYLLFAEGTG 678
             D+SKLHFE+H +KNKL  VVV GIN++ERV+I N+ +EKD      +  K  L  EGTG
Sbjct: 1202 ADRSKLHFEVHAIKNKLSKVVVKGINSVERVIIVNEAKEKD-----PTRKKLKLLVEGTG 1256

Query: 677  LLGVMGTEGVNGYETKSNHIMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLA 498
            LL VMGT+GV+G  T SNHI+EVQQTLGIEAAR  II+EI  TMSSHGMTIDIRHMMLLA
Sbjct: 1257 LLSVMGTDGVDGKNTTSNHIIEVQQTLGIEAARKKIIEEIHFTMSSHGMTIDIRHMMLLA 1316

Query: 497  DLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGI 318
            DLMTFKGEVLGITRHGVQ+M+DSVLMLASFEKTADHLFNASV+GR D+IEGVSECIIMGI
Sbjct: 1317 DLMTFKGEVLGITRHGVQRMRDSVLMLASFEKTADHLFNASVSGRVDRIEGVSECIIMGI 1376

Query: 317  PMQIGTGMLKVRQRVQQVELNYGLDPIL 234
            PMQIGTGMLKVRQ VQ VELNYG DPI+
Sbjct: 1377 PMQIGTGMLKVRQSVQPVELNYGPDPII 1404


>ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1 [Eucalyptus grandis]
          Length = 1402

 Score = 1314 bits (3400), Expect = 0.0
 Identities = 676/971 (69%), Positives = 778/971 (80%), Gaps = 19/971 (1%)
 Frame = -1

Query: 3086 SSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCN 2907
            S RKR ADEL FG IVDRHLEDGDV+LFNRQPSLHRMSIMCHRAR+MPWRTLRFNESVCN
Sbjct: 432  SFRKRLADELGFGVIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCN 491

Query: 2906 PYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTSSFLITR 2754
            PYNADFDGDEMNMHVPQTEEAR EALMLMG         NGEILVASTQDFLTSSFLITR
Sbjct: 492  PYNADFDGDEMNMHVPQTEEARAEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITR 551

Query: 2753 KDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKMKVYLNL 2574
            KD FYDRA+FSL+CSYMGDGMD IDLPTPA++KP+ELWTGKQ+F+VLLRP A+M+V++NL
Sbjct: 552  KDIFYDRAAFSLICSYMGDGMDLIDLPTPAIIKPIELWTGKQIFSVLLRPNARMRVFVNL 611

Query: 2573 TVTEKNYQKPE-------ETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRD 2415
            T+ EKNY KP+       ETMC NDGFV FRNSELISGQLGKATLGNGNKDGLYS+LLRD
Sbjct: 612  TLKEKNYSKPKNASERELETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSILLRD 671

Query: 2414 YNPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQK 2235
            YN HAA+ CMNRLAKLSARWIGNHGFSIGIDDVQP + L   K E I  GY  CDE I+ 
Sbjct: 672  YNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPDNDLNERKRETILNGYNSCDEKIEL 731

Query: 2234 YNKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPI 2055
            YNKG+L+LQPG DAA TLEA IT +LN IR+   + C+  LHWRNSPLIM+QCGSKGSPI
Sbjct: 732  YNKGKLDLQPGCDAAQTLEAVITGILNQIRNETGQVCMKKLHWRNSPLIMSQCGSKGSPI 791

Query: 2054 NISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFH 1875
            NISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPR+SK P A+GFVANSFYSGLTATEFFFH
Sbjct: 792  NISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRQSKTPAAKGFVANSFYSGLTATEFFFH 851

Query: 1874 TMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSS 1695
            TMGGREGLVDTAVKTADTGYMSRRL+KALEDLSIHYDNTVRNAS CIVQF+YGDDGMD +
Sbjct: 852  TMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFLYGDDGMDPA 911

Query: 1694 QMEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEAFR 1515
             ME K+G PLNFDRL MKVKATCP+ + K LSP +I    +++L E + TP+GG S+A +
Sbjct: 912  LMEGKNGFPLNFDRLFMKVKATCPSREHKYLSPVEISALIEQKLPESESTPDGGLSDASK 971

Query: 1514 DSLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRVCI 1335
             +  K +K   +E  +K  E +    +    + +            IT  QL  F+  C+
Sbjct: 972  -AFKKSVKAFLLEEHEKGSEIIMKFGEDATVENQETVIRVAQKIGGITEGQLRAFIDTCM 1030

Query: 1334 SRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKR 1155
            SRYH K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+
Sbjct: 1031 SRYHLKRIEAGSAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKK 1090

Query: 1154 ISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEIIQA 975
            I TPII+A+L+ + +  +A + KARI+KT+LGQ+AK IK VM++RL SIVITLDM  I+ 
Sbjct: 1091 ILTPIITAELDRDDNVNIARMVKARIDKTVLGQIAKSIKTVMTSRLGSIVITLDMNRIED 1150

Query: 974  SRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFELHTLKNKLPSV 795
            S+LC DA  V+ESI+QTP+IK K   + VL+  KLEVVP  D+ KLHFELH+LKN LP+V
Sbjct: 1151 SQLCIDANTVRESIMQTPKIKPKQLQINVLDVTKLEVVPLVDRGKLHFELHSLKNMLPNV 1210

Query: 794  VVTGINTIERVVINKEEEK---DSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSN 624
            +V GI T+ER V+NK +EK     G+V +   KY L  EGTGL  VMGTEGV+G +TKSN
Sbjct: 1211 IVKGIKTVERAVVNKGKEKYKDKEGKVKER-EKYSLVVEGTGLQEVMGTEGVDGRKTKSN 1269

Query: 623  HIMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQ 444
            HI+E+QQTLGIEAAR  II+EI+  MS+HGM+IDIRHMMLLADLMTF+GEVLGITR G+Q
Sbjct: 1270 HIIEIQQTLGIEAARWCIIEEIQFIMSNHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQ 1329

Query: 443  KMKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQQV 264
            KM  SVLMLASFEKT+DHLF+AS +G+ DKIEGVSECIIMG+PMQ+GTG+LKV QR ++ 
Sbjct: 1330 KMDKSVLMLASFEKTSDHLFHASASGKADKIEGVSECIIMGVPMQLGTGILKVIQRDEKP 1389

Query: 263  ELNYGLDPILS 231
            EL Y  DPI+S
Sbjct: 1390 ELTYASDPIIS 1400


>gb|KCW52757.1| hypothetical protein EUGRSUZ_J02108 [Eucalyptus grandis]
          Length = 1184

 Score = 1314 bits (3400), Expect = 0.0
 Identities = 676/971 (69%), Positives = 778/971 (80%), Gaps = 19/971 (1%)
 Frame = -1

Query: 3086 SSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCN 2907
            S RKR ADEL FG IVDRHLEDGDV+LFNRQPSLHRMSIMCHRAR+MPWRTLRFNESVCN
Sbjct: 214  SFRKRLADELGFGVIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCN 273

Query: 2906 PYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTSSFLITR 2754
            PYNADFDGDEMNMHVPQTEEAR EALMLMG         NGEILVASTQDFLTSSFLITR
Sbjct: 274  PYNADFDGDEMNMHVPQTEEARAEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITR 333

Query: 2753 KDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKMKVYLNL 2574
            KD FYDRA+FSL+CSYMGDGMD IDLPTPA++KP+ELWTGKQ+F+VLLRP A+M+V++NL
Sbjct: 334  KDIFYDRAAFSLICSYMGDGMDLIDLPTPAIIKPIELWTGKQIFSVLLRPNARMRVFVNL 393

Query: 2573 TVTEKNYQKPE-------ETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRD 2415
            T+ EKNY KP+       ETMC NDGFV FRNSELISGQLGKATLGNGNKDGLYS+LLRD
Sbjct: 394  TLKEKNYSKPKNASERELETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSILLRD 453

Query: 2414 YNPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQK 2235
            YN HAA+ CMNRLAKLSARWIGNHGFSIGIDDVQP + L   K E I  GY  CDE I+ 
Sbjct: 454  YNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPDNDLNERKRETILNGYNSCDEKIEL 513

Query: 2234 YNKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPI 2055
            YNKG+L+LQPG DAA TLEA IT +LN IR+   + C+  LHWRNSPLIM+QCGSKGSPI
Sbjct: 514  YNKGKLDLQPGCDAAQTLEAVITGILNQIRNETGQVCMKKLHWRNSPLIMSQCGSKGSPI 573

Query: 2054 NISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFH 1875
            NISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPR+SK P A+GFVANSFYSGLTATEFFFH
Sbjct: 574  NISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRQSKTPAAKGFVANSFYSGLTATEFFFH 633

Query: 1874 TMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSS 1695
            TMGGREGLVDTAVKTADTGYMSRRL+KALEDLSIHYDNTVRNAS CIVQF+YGDDGMD +
Sbjct: 634  TMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFLYGDDGMDPA 693

Query: 1694 QMEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEAFR 1515
             ME K+G PLNFDRL MKVKATCP+ + K LSP +I    +++L E + TP+GG S+A +
Sbjct: 694  LMEGKNGFPLNFDRLFMKVKATCPSREHKYLSPVEISALIEQKLPESESTPDGGLSDASK 753

Query: 1514 DSLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRVCI 1335
             +  K +K   +E  +K  E +    +    + +            IT  QL  F+  C+
Sbjct: 754  -AFKKSVKAFLLEEHEKGSEIIMKFGEDATVENQETVIRVAQKIGGITEGQLRAFIDTCM 812

Query: 1334 SRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKR 1155
            SRYH K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+
Sbjct: 813  SRYHLKRIEAGSAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKK 872

Query: 1154 ISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEIIQA 975
            I TPII+A+L+ + +  +A + KARI+KT+LGQ+AK IK VM++RL SIVITLDM  I+ 
Sbjct: 873  ILTPIITAELDRDDNVNIARMVKARIDKTVLGQIAKSIKTVMTSRLGSIVITLDMNRIED 932

Query: 974  SRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFELHTLKNKLPSV 795
            S+LC DA  V+ESI+QTP+IK K   + VL+  KLEVVP  D+ KLHFELH+LKN LP+V
Sbjct: 933  SQLCIDANTVRESIMQTPKIKPKQLQINVLDVTKLEVVPLVDRGKLHFELHSLKNMLPNV 992

Query: 794  VVTGINTIERVVINKEEEK---DSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSN 624
            +V GI T+ER V+NK +EK     G+V +   KY L  EGTGL  VMGTEGV+G +TKSN
Sbjct: 993  IVKGIKTVERAVVNKGKEKYKDKEGKVKER-EKYSLVVEGTGLQEVMGTEGVDGRKTKSN 1051

Query: 623  HIMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQ 444
            HI+E+QQTLGIEAAR  II+EI+  MS+HGM+IDIRHMMLLADLMTF+GEVLGITR G+Q
Sbjct: 1052 HIIEIQQTLGIEAARWCIIEEIQFIMSNHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQ 1111

Query: 443  KMKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQQV 264
            KM  SVLMLASFEKT+DHLF+AS +G+ DKIEGVSECIIMG+PMQ+GTG+LKV QR ++ 
Sbjct: 1112 KMDKSVLMLASFEKTSDHLFHASASGKADKIEGVSECIIMGVPMQLGTGILKVIQRDEKP 1171

Query: 263  ELNYGLDPILS 231
            EL Y  DPI+S
Sbjct: 1172 ELTYASDPIIS 1182


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score = 1306 bits (3380), Expect = 0.0
 Identities = 687/981 (70%), Positives = 772/981 (78%), Gaps = 31/981 (3%)
 Frame = -1

Query: 3080 RKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY 2901
            RKR ADELKFG +VDRHLEDGD++LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY
Sbjct: 432  RKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY 491

Query: 2900 NADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTSSFLITRKD 2748
            NADFDGDEMNMHVPQTEEARTEALMLMG         NGEILVASTQDFLTSSFLITRKD
Sbjct: 492  NADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD 551

Query: 2747 TFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKMKVYLNLTV 2568
             FYDRA+FSL+CSYMGDGMD IDLPTPALLKP+ELWTGKQLF+VLLRP A ++VYLNL V
Sbjct: 552  IFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRPHASVRVYLNLIV 611

Query: 2567 TEKNYQKP-----------EETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLL 2421
             E+NY K             ETMC +DGFV  RNSELI GQLGKATLGNGNKDGLYSVLL
Sbjct: 612  KERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATLGNGNKDGLYSVLL 671

Query: 2420 RDYNPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELI 2241
            RDYN HAA+ CMNRLAKLSARWIGNHGFSIGIDDVQP  RL   K   ISG Y KCDE I
Sbjct: 672  RDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKALTISGDYKKCDEEI 731

Query: 2240 QKYNKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGS 2061
            Q +N+G+L+ +PG+DAA TLEA +T +LN+IRD   K C+  LHWRNSPLIM+QCGSKGS
Sbjct: 732  QTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNSPLIMSQCGSKGS 791

Query: 2060 PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFF 1881
             INISQM+ACVGQQSVGGRRAPNGFIDRSLPHF R SK P A+GFVANSFYSGLTATEFF
Sbjct: 792  AINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANSFYSGLTATEFF 851

Query: 1880 FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMD 1701
            FHTM GREGLVDTAVKTA+TGYMSRRL+KALEDLSIHYDNTVRNAS CIVQF+YGDDGMD
Sbjct: 852  FHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFIYGDDGMD 911

Query: 1700 SSQMEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEA 1521
             + ME KSG PLNFDRLLMKVKATCP  +QK L    I +  +E+L++ D  P G CSEA
Sbjct: 912  PACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLAKHD--PAGVCSEA 969

Query: 1520 FRDSLSKFLK---------VKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITS 1368
            F+ SL  FLK         +K V +  +  E LE                       I+ 
Sbjct: 970  FKKSLKGFLKSQTNELDRVMKLVNNCAQKSEILE---------------KVGHKISGISD 1014

Query: 1367 RQLEVFLRVCISRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVP 1188
            RQLEVF+  CISRY +K                GEPGTQMTLKTFHFAGVASMN+T GVP
Sbjct: 1015 RQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVP 1074

Query: 1187 RIKEIINAAKRISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASI 1008
            RIKEIINAAKRISTP+I+A+LE + +  +A + K RIEKT+LGQVAK IKIV+++R AS+
Sbjct: 1075 RIKEIINAAKRISTPVITAELEFDDNPNIAQIVKGRIEKTVLGQVAKSIKIVITSRSASV 1134

Query: 1007 VITLDMEIIQASRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFE 828
            VITLDMEII  + L  DA  VKESILQTP+IKLK+QHVKVL+ RKLEVVP  D+S++HFE
Sbjct: 1135 VITLDMEIILDAELYIDANIVKESILQTPKIKLKEQHVKVLDGRKLEVVPPADRSQIHFE 1194

Query: 827  LHTLKNKLPSVVVTGINTIER-VVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTEG 651
            LH+LKN LP VVV GI T+ER VV +K +EK + +  ++   + L  EGTGL  VMG EG
Sbjct: 1195 LHSLKNLLPLVVVKGIKTVERTVVYDKNKEKKNQKEEETTKHFQLLVEGTGLQAVMGIEG 1254

Query: 650  VNGYETKSNHIMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEV 471
            ++G  T SNH+ME++Q LGIEAAR  IIDEI  TM  HGMTID RHMMLLAD+MTF+GEV
Sbjct: 1255 IDGRRTWSNHVMEMEQILGIEAARKCIIDEIAQTMEHHGMTIDRRHMMLLADVMTFRGEV 1314

Query: 470  LGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGML 291
            LGITR G+QKM  S+LMLASFE+TADHLFNA+VNGRDDKIEGV+ECIIMGIPMQIGTG+L
Sbjct: 1315 LGITRFGIQKMDKSILMLASFERTADHLFNAAVNGRDDKIEGVTECIIMGIPMQIGTGIL 1374

Query: 290  KVRQRVQQVE-LNYGLDPILS 231
            KV QRV     L YG DP+LS
Sbjct: 1375 KVIQRVDPPPMLRYGPDPVLS 1395


>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
            nucifera]
          Length = 1392

 Score = 1305 bits (3376), Expect = 0.0
 Identities = 679/968 (70%), Positives = 776/968 (80%), Gaps = 11/968 (1%)
 Frame = -1

Query: 3101 ISLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFN 2922
            ++L+FS+RKR ADELK+GYIV+RHLEDGD++LFNRQPSLHRMSIM HRARIMPWRTLRFN
Sbjct: 437  MNLRFSARKRAADELKYGYIVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFN 496

Query: 2921 ESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTSS 2769
            ESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG         NG ILVASTQDFLTS+
Sbjct: 497  ESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGAILVASTQDFLTSA 556

Query: 2768 FLITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKMK 2589
            FLITRKDTFYDRA+FSLMCSYMGDGMD +DLPTPAL+KP+ELWTGKQLF+VL+RP A M+
Sbjct: 557  FLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGKQLFSVLVRPHAHMR 616

Query: 2588 VYLNLTVTEKNYQKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDYN 2409
            VYLNLTV EKN  K +ETMC NDGFV FRNSELI GQLGKATLGNGNKDGL+SVLLRDYN
Sbjct: 617  VYLNLTVLEKNCVKQKETMCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYN 676

Query: 2408 PHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKYN 2229
             HAA+ CMNR+AKLSARWIGNHGFSIGIDDVQP + L   K E I  GY  CDELI  YN
Sbjct: 677  AHAAASCMNRIAKLSARWIGNHGFSIGIDDVQPGELLKDKKKETIEDGYKACDELIHSYN 736

Query: 2228 KGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPINI 2049
            KG LEL+PG DAA TLEA+IT+ LN+IR+  A  C+  LHWRNSPLIM+QCGSKGSPINI
Sbjct: 737  KGNLELEPGCDAAQTLEAQITRKLNEIREETAAVCMQELHWRNSPLIMSQCGSKGSPINI 796

Query: 2048 SQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHTM 1869
            SQM+ACVGQQSVGGRRAPNGFIDRSLPHFPRKSK P A+GFVANSFY+GLTATEFFFHTM
Sbjct: 797  SQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFYTGLTATEFFFHTM 856

Query: 1868 GGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQM 1689
            GGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNAS  +VQF+YGDDG+D + M
Sbjct: 857  GGREGLVDTAVKTADTGYMSRRLIKALEDLAVYYDDTVRNASGGVVQFLYGDDGLDPANM 916

Query: 1688 EEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEAFRDS 1509
            E K G PLN +R+ +K KATCP+G   SL PS+I K  D+R+S  DMTP+GGCS AF+  
Sbjct: 917  EGKKGIPLNLERVYLKTKATCPSGTNASLCPSEIVKILDDRISRYDMTPDGGCSSAFKKL 976

Query: 1508 LSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRVCISR 1329
            L  F++ + +  L+ T + L   E+   +D              IT++QL+VFL  CISR
Sbjct: 977  LVDFIQNR-ISILRNTRKALGLDEEYAKKDNSDILEHIAANISGITTQQLKVFLETCISR 1035

Query: 1328 YHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRIS 1149
            YH K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK IS
Sbjct: 1036 YHLKRIEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNIS 1095

Query: 1148 TPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEIIQASR 969
            TPII+A LE + + K A + K  IEKT+LG+VAK IKIVM+ R ASIVI+LDM  I+A++
Sbjct: 1096 TPIITATLECDDNVKSARIVKGCIEKTVLGEVAKSIKIVMTQRQASIVISLDMARIEAAQ 1155

Query: 968  LCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVP-QTDKSKLHFELHTLKNKLPSVV 792
            L   A  VKESIL+    K K + + V    KL V+P ++D+SKLHFELH LK  LP V+
Sbjct: 1156 LKISADSVKESILKHLNPKFKPK-IVVDKGYKLIVIPTESDRSKLHFELHNLKAVLPQVI 1214

Query: 791  VTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSNHIME 612
            V GI+T++R VINK ++           KY L  EGT LLGVMGT GV+G +T SNHI+E
Sbjct: 1215 VKGISTVQRAVINKSKD----------GKYNLLVEGTNLLGVMGTPGVDGCKTTSNHIIE 1264

Query: 611  VQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKD 432
            VQ TLGIEAAR  IIDEI++TM  HGM IDIRHMMLLADLMT+KGEVLGITR G+QKMK+
Sbjct: 1265 VQGTLGIEAARRCIIDEIQYTMGKHGMDIDIRHMMLLADLMTYKGEVLGITRTGIQKMKE 1324

Query: 431  SVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQQV-ELN 255
            SVLMLASFEKTADHLFNASVNGRDDKIEGVSECII+GIPMQIGTG+LKV QR  QV +L+
Sbjct: 1325 SVLMLASFEKTADHLFNASVNGRDDKIEGVSECIILGIPMQIGTGILKVIQRYPQVPQLS 1384

Query: 254  YGLDPILS 231
            Y  DPI+S
Sbjct: 1385 YKPDPIIS 1392


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Cucumis
            sativus]
          Length = 1400

 Score = 1304 bits (3375), Expect = 0.0
 Identities = 683/982 (69%), Positives = 770/982 (78%), Gaps = 26/982 (2%)
 Frame = -1

Query: 3098 SLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFNE 2919
            SL  S RKR ADELK+G IV+RHLEDGDV+LFNRQPSLHRMSIMCHR R+MPWRTLRFNE
Sbjct: 425  SLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNE 484

Query: 2918 SVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTSSF 2766
            SVCNPYNADFDGDEMNMHVPQTEEARTEA++LMG         NGEILVASTQDFLTSSF
Sbjct: 485  SVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSF 544

Query: 2765 LITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKMKV 2586
            LITRKDTFYDRA+FSLMCSYMGDGMD +DLPTPAL+KP+ELWTGKQLF+VL+RP A MKV
Sbjct: 545  LITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMKV 604

Query: 2585 YLNLTVTEKNY------QKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVL 2424
            YLNLTV EK+Y      +K  ETMC NDGFV FRNSELISGQ+GKATLGNGNKDGLYSVL
Sbjct: 605  YLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSVL 664

Query: 2423 LRDYNPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDEL 2244
            LRDY  HAA+VCMNRLAKLSARWIGNHGFSIGIDDVQP D+L+  K   I  GY  CD+ 
Sbjct: 665  LRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILEGYRDCDKQ 724

Query: 2243 IQKYNKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKG 2064
            I  +N G L  + G DAA +LE+KIT++LN IR+  A  C+  LHWRNSPLIM+QCGSKG
Sbjct: 725  INLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLIMSQCGSKG 784

Query: 2063 SPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEF 1884
            SPINISQMVACVGQQSVGGRRAP+GFIDRSLPHF RK+K P A+GFVANSFYSGLTATEF
Sbjct: 785  SPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLTATEF 844

Query: 1883 FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGM 1704
            FFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSIHYD++VRNA  CIVQF YGDDGM
Sbjct: 845  FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGM 904

Query: 1703 DSSQMEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSE 1524
            D +QME KSG PLNF+RL +K KATCP+   K LSPS+  +  ++RLS+ D +PE GCS 
Sbjct: 905  DPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDRLSKDDASPECGCSP 964

Query: 1523 AFRDSLSKFLKVKCVESLKKTIETLEPPED---------QQGEDQKXXXXXXXXXXXXIT 1371
            AF  SL  FL  K VE+ KK+  TL    +             D              +T
Sbjct: 965  AFVGSLKIFLN-KYVEAQKKSWGTLLADNESAVDKSIISSSDNDNIVIRNKVVQNIAGVT 1023

Query: 1370 SRQLEVFLRVCISRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1191
             RQL+VFL  C+SRYHTK                GEPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1024 HRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1083

Query: 1190 PRIKEIINAAKRISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLAS 1011
            PRIKEIIN AKRISTPI++A L  + +  +A + KARIEKT LGQ+AK I+IVMS+R A 
Sbjct: 1084 PRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSAL 1143

Query: 1010 IVITLDMEIIQASRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQ-TDKSKLH 834
            I I LDME I+ + L  DA  VK++IL TP++KLK +H+ VL+ RKL V+PQ  D++KLH
Sbjct: 1144 IEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLH 1203

Query: 833  FELHTLKNKLPSVVVTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTE 654
            F LH LKN LP VVV GI T+ R VI +E++K       +  K+ L  EGTGL  VMGTE
Sbjct: 1204 FNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDK-----ARNAKKFSLLVEGTGLQAVMGTE 1258

Query: 653  GVNGYETKSNHIMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGE 474
            GV+G  TKSNHI+EVQQ LGIEAAR  II+EIK+TM SHGM+IDIRHMMLL DLMTF+GE
Sbjct: 1259 GVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGE 1318

Query: 473  VLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGM 294
            VLGITR G+QKM  SVLMLASFEKTADHLFNASVNGRDDKIEGVSEC+IMGIPM +GTGM
Sbjct: 1319 VLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGM 1378

Query: 293  LKVRQRVQ-QVELNYGLDPILS 231
            LKVRQRV    +L YG   ILS
Sbjct: 1379 LKVRQRVSVPQQLPYGPPAILS 1400


>ref|XP_010092991.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
            gi|587863463|gb|EXB53229.1| DNA-directed RNA polymerase
            III subunit RPC1 [Morus notabilis]
          Length = 1179

 Score = 1304 bits (3374), Expect = 0.0
 Identities = 670/969 (69%), Positives = 776/969 (80%), Gaps = 18/969 (1%)
 Frame = -1

Query: 3083 SRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNP 2904
            SRKR ADELK+G IV+RHLEDGD++LFNRQPSLHRMSIMCHRAR+MPWRTLRFNESVCNP
Sbjct: 215  SRKRLADELKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESVCNP 274

Query: 2903 YNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTSSFLITRK 2751
            YNADFDGDEMNMHVPQTEEARTEA++LMG         NGEILVASTQDFLTSSFLITRK
Sbjct: 275  YNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK 334

Query: 2750 DTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKMKVYLNLT 2571
            DTFYDRA+FSLMCSYMGD M+  DLPTPA++KPVELWTGKQLF+VL+RP A ++V+LNLT
Sbjct: 335  DTFYDRAAFSLMCSYMGDAMEHNDLPTPAVIKPVELWTGKQLFSVLVRPNANVRVFLNLT 394

Query: 2570 VTEKNY-------QKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 2412
            V EKNY       ++  ETMC  DGFVCFRNSELISGQLGK TLGNGNKDGLYS+LLRDY
Sbjct: 395  VREKNYSNKLQENEREFETMCPADGFVCFRNSELISGQLGKGTLGNGNKDGLYSILLRDY 454

Query: 2411 NPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKY 2232
              HAA+ CMNRLAKLSARWIGNHGFSIGIDDVQP D+L   KD+KI+ G   CD+ I+ Y
Sbjct: 455  KAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPSDKLRDEKDQKINEGAKDCDDKIKSY 514

Query: 2231 NKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPIN 2052
             +G L  +PG DAA +LEA IT +LN IR+   K C+  L WRNSPLIM+QCGSKGS IN
Sbjct: 515  KEGNLPPEPGCDAAQSLEAVITGILNKIREETGKLCMKALPWRNSPLIMSQCGSKGSLIN 574

Query: 2051 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHT 1872
            ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRK K P A+GFV++SFY GL+ATEFFFHT
Sbjct: 575  ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKDKTPAAKGFVSHSFYDGLSATEFFFHT 634

Query: 1871 MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQ 1692
            MGGREGLVDTAVKTADTGYMSRRL+KALEDL +HYDNTVRNAS+CI+QF YGDDGMD + 
Sbjct: 635  MGGREGLVDTAVKTADTGYMSRRLIKALEDLFVHYDNTVRNASACIIQFCYGDDGMDPAH 694

Query: 1691 MEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEAFRD 1512
            ME K+G PLNF+RL +K KATCPAG  + LSP  + +  + RLS++DMTPEGGCS AF++
Sbjct: 695  MEGKNGAPLNFERLFLKAKATCPAGGTEKLSPEKVSELVESRLSKKDMTPEGGCSAAFKN 754

Query: 1511 SLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRVCIS 1332
            SL  FL    V++ K+T +  E  E     +               T+RQLEVFL  CIS
Sbjct: 755  SLKSFLD-NYVKAFKRTWDPCESTEGHAKMENSATTKNIVLQLSGATARQLEVFLDTCIS 813

Query: 1331 RYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRI 1152
            RYH+K                GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+I
Sbjct: 814  RYHSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKI 873

Query: 1151 STPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEIIQAS 972
            STPII+A LE +++   A + + RIEK  LGQVAK IK VM++R+AS+VITLDME IQ +
Sbjct: 874  STPIITAILECDNNVNFARIVRGRIEKISLGQVAKSIKTVMTSRVASVVITLDMERIQDA 933

Query: 971  RLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVP-QTDKSKLHFELHTLKNKLPSV 795
             L  DA  V++SILQTPRIKLK +H++VL+ +KLE++P ++++SKL+  L  L   L ++
Sbjct: 934  LLSIDANVVRDSILQTPRIKLKKEHIRVLDFKKLEILPYESNRSKLYHHLQFLAKMLQNI 993

Query: 794  VVTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTEGVNGYETKSNHIM 615
            +V GI T+ER VI+ E++K +    D   KY L  EGTGLLGVMGTEGV+G  TK+NHI+
Sbjct: 994  LVKGIKTVERAVISSEKDKKT----DISKKYKLLVEGTGLLGVMGTEGVDGRNTKTNHII 1049

Query: 614  EVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMK 435
            EVQQTLGIEAAR+ IIDEI++TM SHGM+ID RHMMLLAD+MT +GEVLGITR G+QKM 
Sbjct: 1050 EVQQTLGIEAARTCIIDEIEYTMKSHGMSIDTRHMMLLADVMTSRGEVLGITRFGIQKMD 1109

Query: 434  DSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQ-QVEL 258
             SVLMLASFEKTADHLFNASVNGR+DKIEGVSECIIMGIPMQIGTGM+KVRQRV     L
Sbjct: 1110 KSVLMLASFEKTADHLFNASVNGREDKIEGVSECIIMGIPMQIGTGMIKVRQRVDVPPML 1169

Query: 257  NYGLDPILS 231
            +YG  PILS
Sbjct: 1170 SYGPKPILS 1178


>ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1 [Cucumis melo]
          Length = 1400

 Score = 1304 bits (3374), Expect = 0.0
 Identities = 683/982 (69%), Positives = 770/982 (78%), Gaps = 26/982 (2%)
 Frame = -1

Query: 3098 SLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFNE 2919
            SL  S RKR ADELK+G IV+RHLEDGDV+LFNRQPSLHRMSIMCHR R+MPWRTLRFNE
Sbjct: 425  SLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNE 484

Query: 2918 SVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTSSF 2766
            SVCNPYNADFDGDEMNMHVPQTEEARTEA++LMG         NGEILVASTQDFLTSSF
Sbjct: 485  SVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSF 544

Query: 2765 LITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKMKV 2586
            LITRKDTFYDRA+FSLMCSYMGDGMD IDLPTPAL+KP+ELWTGKQLF+VL+RP A MKV
Sbjct: 545  LITRKDTFYDRAAFSLMCSYMGDGMDLIDLPTPALIKPIELWTGKQLFSVLVRPHASMKV 604

Query: 2585 YLNLTVTEKNY------QKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVL 2424
            YLNLTV EK+Y      +K  ETMC NDGFV FRNSELISGQ+GKATLGNGNKDGLYSVL
Sbjct: 605  YLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSVL 664

Query: 2423 LRDYNPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDEL 2244
            LRDY  HAA+VCMNRLAKLSARWIGNHGFSIGIDDVQP D+L+  K   I  GY  CD+ 
Sbjct: 665  LRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVXKKQTTILEGYRDCDKQ 724

Query: 2243 IQKYNKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKG 2064
            I  +N G L  + G DAA +LEAKIT++LN IR+  A  C+  LHWRNSPLIM+QCGSKG
Sbjct: 725  INLFNTGNLPPEAGCDAAQSLEAKITQILNGIREATANVCMQNLHWRNSPLIMSQCGSKG 784

Query: 2063 SPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEF 1884
            SPINISQMVACVGQQSVGGRRAP+GFIDRSLPHF RK+K P A+GFVANSFYSGLTATEF
Sbjct: 785  SPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLTATEF 844

Query: 1883 FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGM 1704
            FFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI+YD++VRNA  CIVQF YGDDGM
Sbjct: 845  FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIYYDSSVRNAGGCIVQFCYGDDGM 904

Query: 1703 DSSQMEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSE 1524
            D +QME KSG PLNF+RL +K KATCP+   K LSPS+  +  ++RLS+ D +PE GCS 
Sbjct: 905  DPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDRLSKDDASPECGCSP 964

Query: 1523 AFRDSLSKFLKVKCVESLKKTIETLEPPED---------QQGEDQKXXXXXXXXXXXXIT 1371
            AF  SL  FL  K +E+ KK+  TL    +             D              +T
Sbjct: 965  AFIGSLKIFLN-KYIEAQKKSWSTLLADNETAVDKSIISSSDNDNIVIRNNVVQNIAGVT 1023

Query: 1370 SRQLEVFLRVCISRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1191
             RQL+VFL  C+SRYHTK                GEPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1024 HRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1083

Query: 1190 PRIKEIINAAKRISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLAS 1011
            PRIKEIIN AKRISTPI++A L  + +  +A + KARIEKT LGQ+AK I+IVMS+R A 
Sbjct: 1084 PRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSAL 1143

Query: 1010 IVITLDMEIIQASRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQ-TDKSKLH 834
            I I LDME I+ + L  DA  VK++IL TP++KLK +H+ VL+ RKL V+PQ  D++KLH
Sbjct: 1144 IEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLH 1203

Query: 833  FELHTLKNKLPSVVVTGINTIERVVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTE 654
            F LH LKN LP VVV GI T+ R VI +E++K       +  K+ L  EGTGL  VMGTE
Sbjct: 1204 FNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDK-----ARNAKKFSLLVEGTGLQAVMGTE 1258

Query: 653  GVNGYETKSNHIMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGE 474
            GV+G  TKSNHI+EVQQ LGIEAAR  II+EIK+TM SHGM+IDIRHMMLL DLMTF+GE
Sbjct: 1259 GVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGE 1318

Query: 473  VLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGM 294
            VLGITR G+QKM  SVLMLASFEKTADHLFNASVNGRDDKIEGVSEC+IMGIPM +GTGM
Sbjct: 1319 VLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGM 1378

Query: 293  LKVRQRVQ-QVELNYGLDPILS 231
            LKVRQRV    +L YG   ILS
Sbjct: 1379 LKVRQRVSVPRQLPYGPPAILS 1400


>ref|XP_012854429.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Erythranthe guttatus]
            gi|848912313|ref|XP_012854431.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1-like isoform X2
            [Erythranthe guttatus] gi|848912315|ref|XP_012854432.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Erythranthe guttatus]
            gi|848912317|ref|XP_012854433.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1-like isoform X2
            [Erythranthe guttatus] gi|848912319|ref|XP_012854434.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Erythranthe guttatus]
          Length = 1405

 Score = 1300 bits (3364), Expect = 0.0
 Identities = 685/981 (69%), Positives = 772/981 (78%), Gaps = 23/981 (2%)
 Frame = -1

Query: 3104 EISLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRF 2925
            EISL    R RHAD+LK+GYIV RHL+DGD+ILFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 429  EISLTSKVRHRHADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIMSHRARIMPWRTLRF 488

Query: 2924 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTS 2772
            NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG         NGEILVASTQDFLTS
Sbjct: 489  NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 548

Query: 2771 SFLITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKM 2592
            S+LITRKDTFYDRASFSL+CSYMGD MD IDLPTPAL+KPVELWTGKQLF++LLRP AKM
Sbjct: 549  SYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTGKQLFSILLRPHAKM 608

Query: 2591 KVYLNLTVTEKNYQKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 2412
            +VY+NLTV EKNY K  ETMC  DGFV  RNSELISGQLGKATLGNG+KDGLYSVLLRDY
Sbjct: 609  RVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLGNGSKDGLYSVLLRDY 668

Query: 2411 NPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKY 2232
            + HAA+ CMNRLAKLSARWIGNHGFSIGI+DVQP   L   K   I  GY +C + I  Y
Sbjct: 669  SAHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGIVLNKEKKVTIDKGYGQCIDYIGSY 728

Query: 2231 NKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPIN 2052
              G L+L PG + A TLEA IT  LN+IR+  A  C+  LHWRNSPLIM+QCGSKGSPIN
Sbjct: 729  KSGSLDLLPGCNNAETLEANITGTLNNIRERTANVCMNNLHWRNSPLIMSQCGSKGSPIN 788

Query: 2051 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHT 1872
            I+QMVACVGQQSVGGRRAPNGF+DR+LPHF R++K P A+GFV NSFY+GL+ATEFFFHT
Sbjct: 789  IAQMVACVGQQSVGGRRAPNGFVDRTLPHFEREAKDPDAKGFVQNSFYTGLSATEFFFHT 848

Query: 1871 MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQ 1692
            MGGREGLVDTAVKTADTGYM+RRLMKALEDLS+HYD TVRNAS CIVQFVYG D MD  Q
Sbjct: 849  MGGREGLVDTAVKTADTGYMARRLMKALEDLSVHYDGTVRNASVCIVQFVYGGDAMDPGQ 908

Query: 1691 MEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDE----RLSERDMTPEGGCSE 1524
            MEEKSG PLNF+RL MK KATCPA +QKSLS  +I K  DE    RLSE   TPEG  S+
Sbjct: 909  MEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTMDEIIGDRLSESTGTPEGESSQ 968

Query: 1523 AFRDSLSKFLKVKCVE-SLKKTIETLEPPED--------QQGEDQKXXXXXXXXXXXXIT 1371
            AF  S +K   ++  + SL+K I+   P  D        +  ++ K            +T
Sbjct: 969  AFSASSNKEGGMETFDNSLRKFIQKKYPNSDLMLKLNGKEHPDEDKGYLEKIASNICGVT 1028

Query: 1370 SRQLEVFLRVCISRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1191
             +QL VFL  CISRY  K                GEPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1029 RQQLMVFLETCISRYSLKKIEGGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGV 1088

Query: 1190 PRIKEIINAAKRISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLAS 1011
            PRIKEIINAAK+I+TPII+  L+ +++  +A + K RIEKTLL QVAK IK   ++R AS
Sbjct: 1089 PRIKEIINAAKKINTPIITTALQSDNNEIIAKIVKGRIEKTLLEQVAKSIKTSQASRSAS 1148

Query: 1010 IVITLDMEIIQASRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHF 831
            IVITLDM  IQ + L  DAY VKESIL+T R+KLK+Q VKVL+ RKLE+V   DK KL F
Sbjct: 1149 IVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQQVKVLDHRKLEIVMHADKKKLQF 1208

Query: 830  ELHTLKNKLPSVVVTGINTIER-VVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTE 654
            ELH LKNK+  VVV GI+T+ER +++N+ +EKD    P +  K  L  EGTGLL VMG E
Sbjct: 1209 ELHGLKNKISKVVVKGIDTVERAIILNEAKEKD----PSANKKMKLLVEGTGLLSVMGIE 1264

Query: 653  GVNGYETKSNHIMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGE 474
            GV G +T SNHI+EVQ TLGIEAAR  IIDEI++TMSSHGMTIDIRHMMLLADLMTFKGE
Sbjct: 1265 GVEGRKTTSNHIIEVQHTLGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGE 1324

Query: 473  VLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGM 294
            VLGITR+GVQKMKDSVLMLASFE+T+DHLFNAS +G+ DKIEGVSECIIMGIP+QIGTGM
Sbjct: 1325 VLGITRYGVQKMKDSVLMLASFERTSDHLFNASAHGKVDKIEGVSECIIMGIPVQIGTGM 1384

Query: 293  LKVRQRVQQVELNYGLDPILS 231
            LKVRQ V+ +EL YG DPI+S
Sbjct: 1385 LKVRQSVKPIELTYGPDPIIS 1405


>ref|XP_012854428.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Erythranthe guttatus]
          Length = 1412

 Score = 1300 bits (3364), Expect = 0.0
 Identities = 685/981 (69%), Positives = 772/981 (78%), Gaps = 23/981 (2%)
 Frame = -1

Query: 3104 EISLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRF 2925
            EISL    R RHAD+LK+GYIV RHL+DGD+ILFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 436  EISLTSKVRHRHADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIMSHRARIMPWRTLRF 495

Query: 2924 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTS 2772
            NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG         NGEILVASTQDFLTS
Sbjct: 496  NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 555

Query: 2771 SFLITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKM 2592
            S+LITRKDTFYDRASFSL+CSYMGD MD IDLPTPAL+KPVELWTGKQLF++LLRP AKM
Sbjct: 556  SYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTGKQLFSILLRPHAKM 615

Query: 2591 KVYLNLTVTEKNYQKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 2412
            +VY+NLTV EKNY K  ETMC  DGFV  RNSELISGQLGKATLGNG+KDGLYSVLLRDY
Sbjct: 616  RVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLGNGSKDGLYSVLLRDY 675

Query: 2411 NPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKY 2232
            + HAA+ CMNRLAKLSARWIGNHGFSIGI+DVQP   L   K   I  GY +C + I  Y
Sbjct: 676  SAHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGIVLNKEKKVTIDKGYGQCIDYIGSY 735

Query: 2231 NKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPIN 2052
              G L+L PG + A TLEA IT  LN+IR+  A  C+  LHWRNSPLIM+QCGSKGSPIN
Sbjct: 736  KSGSLDLLPGCNNAETLEANITGTLNNIRERTANVCMNNLHWRNSPLIMSQCGSKGSPIN 795

Query: 2051 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHT 1872
            I+QMVACVGQQSVGGRRAPNGF+DR+LPHF R++K P A+GFV NSFY+GL+ATEFFFHT
Sbjct: 796  IAQMVACVGQQSVGGRRAPNGFVDRTLPHFEREAKDPDAKGFVQNSFYTGLSATEFFFHT 855

Query: 1871 MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQ 1692
            MGGREGLVDTAVKTADTGYM+RRLMKALEDLS+HYD TVRNAS CIVQFVYG D MD  Q
Sbjct: 856  MGGREGLVDTAVKTADTGYMARRLMKALEDLSVHYDGTVRNASVCIVQFVYGGDAMDPGQ 915

Query: 1691 MEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDE----RLSERDMTPEGGCSE 1524
            MEEKSG PLNF+RL MK KATCPA +QKSLS  +I K  DE    RLSE   TPEG  S+
Sbjct: 916  MEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTMDEIIGDRLSESTGTPEGESSQ 975

Query: 1523 AFRDSLSKFLKVKCVE-SLKKTIETLEPPED--------QQGEDQKXXXXXXXXXXXXIT 1371
            AF  S +K   ++  + SL+K I+   P  D        +  ++ K            +T
Sbjct: 976  AFSASSNKEGGMETFDNSLRKFIQKKYPNSDLMLKLNGKEHPDEDKGYLEKIASNICGVT 1035

Query: 1370 SRQLEVFLRVCISRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1191
             +QL VFL  CISRY  K                GEPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1036 RQQLMVFLETCISRYSLKKIEGGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGV 1095

Query: 1190 PRIKEIINAAKRISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLAS 1011
            PRIKEIINAAK+I+TPII+  L+ +++  +A + K RIEKTLL QVAK IK   ++R AS
Sbjct: 1096 PRIKEIINAAKKINTPIITTALQSDNNEIIAKIVKGRIEKTLLEQVAKSIKTSQASRSAS 1155

Query: 1010 IVITLDMEIIQASRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHF 831
            IVITLDM  IQ + L  DAY VKESIL+T R+KLK+Q VKVL+ RKLE+V   DK KL F
Sbjct: 1156 IVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQQVKVLDHRKLEIVMHADKKKLQF 1215

Query: 830  ELHTLKNKLPSVVVTGINTIER-VVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTE 654
            ELH LKNK+  VVV GI+T+ER +++N+ +EKD    P +  K  L  EGTGLL VMG E
Sbjct: 1216 ELHGLKNKISKVVVKGIDTVERAIILNEAKEKD----PSANKKMKLLVEGTGLLSVMGIE 1271

Query: 653  GVNGYETKSNHIMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGE 474
            GV G +T SNHI+EVQ TLGIEAAR  IIDEI++TMSSHGMTIDIRHMMLLADLMTFKGE
Sbjct: 1272 GVEGRKTTSNHIIEVQHTLGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGE 1331

Query: 473  VLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGM 294
            VLGITR+GVQKMKDSVLMLASFE+T+DHLFNAS +G+ DKIEGVSECIIMGIP+QIGTGM
Sbjct: 1332 VLGITRYGVQKMKDSVLMLASFERTSDHLFNASAHGKVDKIEGVSECIIMGIPVQIGTGM 1391

Query: 293  LKVRQRVQQVELNYGLDPILS 231
            LKVRQ V+ +EL YG DPI+S
Sbjct: 1392 LKVRQSVKPIELTYGPDPIIS 1412


>gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Erythranthe guttata]
          Length = 1109

 Score = 1300 bits (3364), Expect = 0.0
 Identities = 685/981 (69%), Positives = 772/981 (78%), Gaps = 23/981 (2%)
 Frame = -1

Query: 3104 EISLKFSSRKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRF 2925
            EISL    R RHAD+LK+GYIV RHL+DGD+ILFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 133  EISLTSKVRHRHADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIMSHRARIMPWRTLRF 192

Query: 2924 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTS 2772
            NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG         NGEILVASTQDFLTS
Sbjct: 193  NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 252

Query: 2771 SFLITRKDTFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKM 2592
            S+LITRKDTFYDRASFSL+CSYMGD MD IDLPTPAL+KPVELWTGKQLF++LLRP AKM
Sbjct: 253  SYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTGKQLFSILLRPHAKM 312

Query: 2591 KVYLNLTVTEKNYQKPEETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLLRDY 2412
            +VY+NLTV EKNY K  ETMC  DGFV  RNSELISGQLGKATLGNG+KDGLYSVLLRDY
Sbjct: 313  RVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLGNGSKDGLYSVLLRDY 372

Query: 2411 NPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELIQKY 2232
            + HAA+ CMNRLAKLSARWIGNHGFSIGI+DVQP   L   K   I  GY +C + I  Y
Sbjct: 373  SAHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGIVLNKEKKVTIDKGYGQCIDYIGSY 432

Query: 2231 NKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGSPIN 2052
              G L+L PG + A TLEA IT  LN+IR+  A  C+  LHWRNSPLIM+QCGSKGSPIN
Sbjct: 433  KSGSLDLLPGCNNAETLEANITGTLNNIRERTANVCMNNLHWRNSPLIMSQCGSKGSPIN 492

Query: 2051 ISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFFFHT 1872
            I+QMVACVGQQSVGGRRAPNGF+DR+LPHF R++K P A+GFV NSFY+GL+ATEFFFHT
Sbjct: 493  IAQMVACVGQQSVGGRRAPNGFVDRTLPHFEREAKDPDAKGFVQNSFYTGLSATEFFFHT 552

Query: 1871 MGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMDSSQ 1692
            MGGREGLVDTAVKTADTGYM+RRLMKALEDLS+HYD TVRNAS CIVQFVYG D MD  Q
Sbjct: 553  MGGREGLVDTAVKTADTGYMARRLMKALEDLSVHYDGTVRNASVCIVQFVYGGDAMDPGQ 612

Query: 1691 MEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDE----RLSERDMTPEGGCSE 1524
            MEEKSG PLNF+RL MK KATCPA +QKSLS  +I K  DE    RLSE   TPEG  S+
Sbjct: 613  MEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTMDEIIGDRLSESTGTPEGESSQ 672

Query: 1523 AFRDSLSKFLKVKCVE-SLKKTIETLEPPED--------QQGEDQKXXXXXXXXXXXXIT 1371
            AF  S +K   ++  + SL+K I+   P  D        +  ++ K            +T
Sbjct: 673  AFSASSNKEGGMETFDNSLRKFIQKKYPNSDLMLKLNGKEHPDEDKGYLEKIASNICGVT 732

Query: 1370 SRQLEVFLRVCISRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1191
             +QL VFL  CISRY  K                GEPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 733  RQQLMVFLETCISRYSLKKIEGGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGV 792

Query: 1190 PRIKEIINAAKRISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLAS 1011
            PRIKEIINAAK+I+TPII+  L+ +++  +A + K RIEKTLL QVAK IK   ++R AS
Sbjct: 793  PRIKEIINAAKKINTPIITTALQSDNNEIIAKIVKGRIEKTLLEQVAKSIKTSQASRSAS 852

Query: 1010 IVITLDMEIIQASRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHF 831
            IVITLDM  IQ + L  DAY VKESIL+T R+KLK+Q VKVL+ RKLE+V   DK KL F
Sbjct: 853  IVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQQVKVLDHRKLEIVMHADKKKLQF 912

Query: 830  ELHTLKNKLPSVVVTGINTIER-VVINKEEEKDSGEVPDSGPKYLLFAEGTGLLGVMGTE 654
            ELH LKNK+  VVV GI+T+ER +++N+ +EKD    P +  K  L  EGTGLL VMG E
Sbjct: 913  ELHGLKNKISKVVVKGIDTVERAIILNEAKEKD----PSANKKMKLLVEGTGLLSVMGIE 968

Query: 653  GVNGYETKSNHIMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGE 474
            GV G +T SNHI+EVQ TLGIEAAR  IIDEI++TMSSHGMTIDIRHMMLLADLMTFKGE
Sbjct: 969  GVEGRKTTSNHIIEVQHTLGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGE 1028

Query: 473  VLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGM 294
            VLGITR+GVQKMKDSVLMLASFE+T+DHLFNAS +G+ DKIEGVSECIIMGIP+QIGTGM
Sbjct: 1029 VLGITRYGVQKMKDSVLMLASFERTSDHLFNASAHGKVDKIEGVSECIIMGIPVQIGTGM 1088

Query: 293  LKVRQRVQQVELNYGLDPILS 231
            LKVRQ V+ +EL YG DPI+S
Sbjct: 1089 LKVRQSVKPIELTYGPDPIIS 1109


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score = 1299 bits (3362), Expect = 0.0
 Identities = 686/974 (70%), Positives = 771/974 (79%), Gaps = 24/974 (2%)
 Frame = -1

Query: 3080 RKRHADELKFGYIVDRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY 2901
            R + A ELK G IVDRHLEDGDV+LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY
Sbjct: 439  RNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPY 498

Query: 2900 NADFDGDEMNMHVPQTEEARTEALMLMG---------NGEILVASTQDFLTSSFLITRKD 2748
            NADFDGDEMNMHVPQTEEARTEAL+LMG         NGEILVASTQDFLTSSFLITRKD
Sbjct: 499  NADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD 558

Query: 2747 TFYDRASFSLMCSYMGDGMDQIDLPTPALLKPVELWTGKQLFTVLLRPFAKMKVYLNLTV 2568
            TFYDRA+FSLMC YMGDGMD++DLPTPA+LKPVELWTGKQLF+VL+RP A M+VY+NLTV
Sbjct: 559  TFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLIRPHANMRVYVNLTV 618

Query: 2567 TEKNYQKPE-----------ETMCRNDGFVCFRNSELISGQLGKATLGNGNKDGLYSVLL 2421
             EK Y               ETMC NDGFV FRNSELISGQLGKATLGNGNKDGLYSVLL
Sbjct: 619  KEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLL 678

Query: 2420 RDYNPHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPPDRLITAKDEKISGGYAKCDELI 2241
            RDY  HA S CMNRLAKLSARWIGNHGFSIGIDDVQP   L   K + IS  Y  C+  I
Sbjct: 679  RDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKI 738

Query: 2240 QKYNKGELELQPGHDAALTLEAKITKVLNDIRDIAAKECLTCLHWRNSPLIMAQCGSKGS 2061
            ++YN+G+L+L+PG DAA TLEA IT +LN IR+ A K C+  L WRNSPLIM+QCGSKGS
Sbjct: 739  KEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGS 798

Query: 2060 PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKSKIPKARGFVANSFYSGLTATEFF 1881
            PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRK+K P A+GFVANSFYSGL+ATEFF
Sbjct: 799  PINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFF 858

Query: 1880 FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDNTVRNASSCIVQFVYGDDGMD 1701
            FHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YDN+VRNA  CIVQF+YGDDGMD
Sbjct: 859  FHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMD 918

Query: 1700 SSQMEEKSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDMTPEGGCSEA 1521
             + ME KSG PLNFDRLLMKVKATCP   Q+ LSP  + +  +++L+      +  CSEA
Sbjct: 919  PANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLAAYG---KESCSEA 975

Query: 1520 FRDSLSKFLKVKCVESLKKTIETLEPPEDQQGEDQKXXXXXXXXXXXXITSRQLEVFLRV 1341
            F +SL KF + +  + L K I+ +   ED   +D+             IT +QLEVF++ 
Sbjct: 976  FLNSLRKFFEGQ-QDKLDKKIKFV---EDIGWDDKSQILEEVTHKTSGITEKQLEVFIQT 1031

Query: 1340 CISRYHTKTXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA 1161
            C SRYH K                GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIIN A
Sbjct: 1032 CFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGA 1091

Query: 1160 KRISTPIISAKLEDEHDAKVASLAKARIEKTLLGQVAKGIKIVMSARLASIVITLDMEII 981
            KRISTPII+A+LE   +   A + K RIEKTLLGQVAK IKIVM++RLASIVI LDME I
Sbjct: 1092 KRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETI 1151

Query: 980  QASRLCTDAYRVKESILQTPRIKLKDQHVKVLNSRKLEVVPQTDKSKLHFELHTLKNKLP 801
            Q + LC +A  VKESI+QTP+IKLK QH+KVL+ RKLE+ P  DKSK+HFEL++LKN LP
Sbjct: 1152 QDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLP 1211

Query: 800  SVVVTGINTIERVVINKEEEKDSGEVPDSG--PKYLLFAEGTGLLGVMGTEGVNGYETKS 627
             V+V GI T+ERVVI  E+EK+  +V ++G   KY L  EGTGL  VMG EG++G +TKS
Sbjct: 1212 MVIVKGIKTVERVVI-AEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKS 1270

Query: 626  NHIMEVQQTLGIEAARSSIIDEIKHTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGV 447
            NHI EVQQTLGIEAAR  IIDEI  TM +HGM+ID RHMMLLADLMTF+GEVLGITR G+
Sbjct: 1271 NHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGI 1330

Query: 446  QKMKDSVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQR-VQ 270
            QKM  SVLMLASFEKTADHLFNASVNGRDD+IEGVSECIIMGIPM +GTG+LK+RQR   
Sbjct: 1331 QKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQRDAV 1390

Query: 269  QVELNYGL-DPILS 231
               L YG  DPI+S
Sbjct: 1391 PPMLKYGAPDPIMS 1404