BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00010901
         (3749 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP00493.1| unnamed protein product [Coffea canephora]           1541   0.0  
ref|XP_012847643.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1478   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1475   0.0  
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1470   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1469   0.0  
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1461   0.0  
ref|XP_009627611.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1461   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]        1459   0.0  
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...  1455   0.0  
ref|NP_001289502.1| DNA-directed RNA polymerase 1, mitochondrial...  1454   0.0  
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer...  1451   0.0  
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1447   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1421   0.0  
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun...  1417   0.0  
ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1410   0.0  
emb|CBI27412.3| unnamed protein product [Vitis vinifera]             1392   0.0  
ref|XP_008389363.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1387   0.0  
ref|XP_009355625.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1386   0.0  
ref|XP_008339743.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1383   0.0  
ref|XP_009356470.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1379   0.0  

>emb|CDP00493.1| unnamed protein product [Coffea canephora]
          Length = 808

 Score = 1541 bits (3991), Expect = 0.0
 Identities = 759/808 (93%), Positives = 773/808 (95%)
 Frame = -3

Query: 2988 MCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAEMMAVIT 2809
            MCEQKLAPNLPYIKSLFLGWFEPLKDAI AEQDLCKDGKNRGAYAQYFDQLPAEMMAVIT
Sbjct: 1    MCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQDLCKDGKNRGAYAQYFDQLPAEMMAVIT 60

Query: 2808 XXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRIHRFLEKTKRKNAMNKNPEEETEPV 2629
                          GSARVVQAACHIGEAIEHEVRIH+FLEKTKRKNAMNKNPE+ETEPV
Sbjct: 61   MHKLMGLLMTGGGYGSARVVQAACHIGEAIEHEVRIHKFLEKTKRKNAMNKNPEKETEPV 120

Query: 2628 AKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQVKVGCRLIQIMMETAYIQP 2449
            AKA+D+LRKKVNVLMKKQKLH VR+IVKHHD SKPWGQDAQVKVGCRLIQIMMETAYIQP
Sbjct: 121  AKAEDRLRKKVNVLMKKQKLHQVREIVKHHDASKPWGQDAQVKVGCRLIQIMMETAYIQP 180

Query: 2448 PVDQFEDGPPEIRPAFVHTLKTVETQRGSRRYGVIECDPLVRKGLERTAKHMVIPYMPML 2269
            PVDQFEDGPP+IRPAFVHTLKTVETQRGSRRYGVIECDPLVRKGLERTAKHMVIPYMPML
Sbjct: 181  PVDQFEDGPPDIRPAFVHTLKTVETQRGSRRYGVIECDPLVRKGLERTAKHMVIPYMPML 240

Query: 2268 VPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLEPVFQALNTLGSTKWRVN 2089
            VPPLNWTG+DRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLEPVFQAL+TLGSTKWRVN
Sbjct: 241  VPPLNWTGYDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLEPVFQALDTLGSTKWRVN 300

Query: 2088 KRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKEIRKWKRKVNTVKKENSERHSQ 1909
            KRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDE+EIRKWK KVN VKKENSERHSQ
Sbjct: 301  KRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEREIRKWKWKVNNVKKENSERHSQ 360

Query: 1908 RCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLG 1729
            RCDIELKLAV RKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLG
Sbjct: 361  RCDIELKLAVARKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLG 420

Query: 1728 KSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSADRPLEGRRWWLNAEDPFQ 1549
             SGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSADRPLEGRRWWLNAED FQ
Sbjct: 421  NSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSADRPLEGRRWWLNAEDSFQ 480

Query: 1548 CLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 1369
            CLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA
Sbjct: 481  CLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA 540

Query: 1368 DVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQVDRKLVKQTVMTSVYGVTYIGAR 1189
            DVYSGIAARVLDIM+RDAARDPASDPNVLRARLLINQVDRKLVKQTVMTSVYGVTYIGAR
Sbjct: 541  DVYSGIAARVLDIMQRDAARDPASDPNVLRARLLINQVDRKLVKQTVMTSVYGVTYIGAR 600

Query: 1188 DQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKVIAMENQ 1009
            DQI RRLKER  I++EAELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKVIAMENQ
Sbjct: 601  DQIKRRLKERCAIEEEAELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKVIAMENQ 660

Query: 1008 PVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGS 829
            PV+WTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVM KRQRTAFPPNFVHSLDGS
Sbjct: 661  PVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGS 720

Query: 828  HMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVELYEAPILENLLDNFQKS 649
            HMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVELYEAPILE+LLDNFQKS
Sbjct: 721  HMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVELYEAPILEDLLDNFQKS 780

Query: 648  XXXXXXXXXPERGDFDLREVLESPYFFN 565
                     PERGDFDLREVLESPYFFN
Sbjct: 781  FPKLKFPPLPERGDFDLREVLESPYFFN 808


>ref|XP_012847643.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Erythranthe
            guttatus] gi|604316708|gb|EYU28900.1| hypothetical
            protein MIMGU_mgv1a000798mg [Erythranthe guttata]
          Length = 983

 Score = 1478 bits (3826), Expect = 0.0
 Identities = 731/985 (74%), Positives = 826/985 (83%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWR ++KQ+ LRNFK  SE+H    +F+     +D  F          S +N+   E+GF
Sbjct: 1    MWRNLSKQSYLRNFKVFSESHPSPNAFSAGKSPKDSIFVENAVPRQLRSCINTCGSELGF 60

Query: 3339 HQSSVLKQKNKEGYRQFGSLSNPCGFGVSGGLRCYXXXXXXXXXXXXXEDVDEIQELIEE 3160
             ++ V  +  +E      ++S+   F   G  R Y              +VDE+QELIEE
Sbjct: 61   RRALVFWRPPREASCPNYAISSHT-FRFFGSTRGYAAAAEALVSTSEE-EVDELQELIEE 118

Query: 3159 MERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIETEAWEQAAKEYEELLEDMCE 2980
            + ++                       KY+ LR+RQ+KIETEAWE AAKEY+ELLEDMCE
Sbjct: 119  INKEINVKSTDNREQKQPKLVGGMGLGKYNSLRRRQIKIETEAWENAAKEYQELLEDMCE 178

Query: 2979 QKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAEMMAVITXXX 2800
            QKLAPNLPYIKSLFLGWFEPL+DAI AEQDLCK+GKNRGAYA YFDQLPAEMMAVIT   
Sbjct: 179  QKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYFDQLPAEMMAVITMHK 238

Query: 2799 XXXXXXXXXXXGSARVVQAACHIGEAIEHEVRIHRFLEKTKRKNAMNKNPEEETEPVAKA 2620
                       GSARVVQAACHIGEAIEHEVRIH+FL+  KRKNA+N+  EE  +P AK 
Sbjct: 239  LMGLLMTGGGNGSARVVQAACHIGEAIEHEVRIHKFLDNCKRKNALNRTSEEGPDPEAKE 298

Query: 2619 QDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQVKVGCRLIQIMMETAYIQPPVD 2440
            QD+LRKKV +LMKKQK+  VR IV+H D  KPWGQDAQVKVGCRLIQI+ +TAYIQPPVD
Sbjct: 299  QDRLRKKVKILMKKQKVQQVRNIVRHQDDLKPWGQDAQVKVGCRLIQILTQTAYIQPPVD 358

Query: 2439 QFEDGPPEIRPAFVHTLKTVETQRGSRRYGVIECDPLVRKGLERTAKHMVIPYMPMLVPP 2260
            Q +DG P+IRPAFVHTLK VET +GSRRYGVIECDPLVRKG+E+TA+HMVIPYMPMLVPP
Sbjct: 359  QRDDGAPDIRPAFVHTLKCVETLKGSRRYGVIECDPLVRKGMEKTARHMVIPYMPMLVPP 418

Query: 2259 LNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLEPVFQALNTLGSTKWRVNKRV 2080
            LNWTG++RGAYLFLPSY+MRTHGAKQQREA++R PKQ+LEP+FQALNTLG+TKWRVNKR+
Sbjct: 419  LNWTGYERGAYLFLPSYMMRTHGAKQQREAVKRTPKQELEPIFQALNTLGNTKWRVNKRI 478

Query: 2079 LGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKEIRKWKRKVNTVKKENSERHSQRCD 1900
            L V+DRIWA+GGRLADLVDR+D+PLPEEPDTEDE EI+KWK KV  VKK NSERHSQRCD
Sbjct: 479  LSVVDRIWANGGRLADLVDREDLPLPEEPDTEDEAEIKKWKWKVKAVKKVNSERHSQRCD 538

Query: 1899 IELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSG 1720
            IELKLAV RK+K+EEGF+YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSG
Sbjct: 539  IELKLAVARKIKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSG 598

Query: 1719 LNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSADRPLEGRRWWLNAEDPFQCLA 1540
            L WLK+HLAN+YGGGVDK S++GR +F ENH+EDIFDSADRPLEG+RWWL AEDPFQCLA
Sbjct: 599  LQWLKVHLANLYGGGVDKFSYDGRISFTENHMEDIFDSADRPLEGKRWWLGAEDPFQCLA 658

Query: 1539 TCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVY 1360
            TCM+L+EALRSP PE+T+S++P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVY
Sbjct: 659  TCMSLTEALRSPYPESTVSYIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVY 718

Query: 1359 SGIAARVLDIMRRDAARDPASDPNVLRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQI 1180
            SGIAARVLDIM+RDAA+DPA DPNV+RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQI
Sbjct: 719  SGIAARVLDIMKRDAAKDPADDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQI 778

Query: 1179 ARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKVIAMENQPVQ 1000
             RRLKER +++D+ ELF+ ACYAAKTTLTALGEMFEAARSIMSWLGDCAK+IA EN PV+
Sbjct: 779  KRRLKERASMEDDTELFACACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIATENHPVR 838

Query: 999  WTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMM 820
            WTTPLGLPVVQPYRKLGRH+IKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMM
Sbjct: 839  WTTPLGLPVVQPYRKLGRHMIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMM 898

Query: 819  MTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVELYEAPILENLLDNFQKSXXX 640
            MTAIAC EAGL+FAGVHDSYWTHACDVD+MN+ILR+KFVELYEAPILENLLD FQ+S   
Sbjct: 899  MTAIACSEAGLSFAGVHDSYWTHACDVDKMNEILREKFVELYEAPILENLLDGFQQSFPK 958

Query: 639  XXXXXXPERGDFDLREVLESPYFFN 565
                  PERGDFDLREVL+S YFFN
Sbjct: 959  LKFPPLPERGDFDLREVLDSTYFFN 983


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score = 1475 bits (3818), Expect = 0.0
 Identities = 744/1006 (73%), Positives = 833/1006 (82%), Gaps = 21/1006 (2%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHF--FSPSFAYKIFLQDY-------------------NFN 3403
            MWRYI+KQA  R  + T ++ F  F+ SF     LQ                       N
Sbjct: 1    MWRYISKQAYSRKLRNTHDSDFLGFAQSFGKTRPLQGLCEEIYRNPNLGVSQSSIFTRVN 60

Query: 3402 GKTRNYSSGSGLNSQYQEVGFHQSSVLKQKNKEGYRQFGSLSNPCGFGVSGGLRCYXXXX 3223
            GK+R        + +   +GF +SS+  +  K  +R  GSL         G LR Y    
Sbjct: 61   GKSRCLDGMCEDSCRNHYLGFSESSIFSRV-KGDFRVCGSL---------GILRSYGSAA 110

Query: 3222 XXXXXXXXXEDVDEIQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKI 3043
                      D+DEIQELIEEM ++N+A++ +                 Y++LR+RQ+K+
Sbjct: 111  EAIASTSEE-DIDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGK-YNLLRRRQIKV 168

Query: 3042 ETEAWEQAAKEYEELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRG 2863
            ETEAWE AAKEY+ELL DMCEQKLAPNLPYIKSLFLGWFEPL+DAI AEQ LC +GKNRG
Sbjct: 169  ETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRG 228

Query: 2862 AYAQYFDQLPAEMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRIHRFLEK 2683
            AYA +FDQLPAEMMAVIT              GSARVVQAA HIGEAIEHE RIHRFLEK
Sbjct: 229  AYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEK 288

Query: 2682 TKRKNAMNKNPEEETEPVAKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQV 2503
            TK KNA++ + EE    + K +++LRKKV +LMKKQKL  VRKIVK  D  KPWGQD  V
Sbjct: 289  TK-KNALDGSLEETAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLV 347

Query: 2502 KVGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTVETQRGSRRYGVIECDPLVR 2323
            KVGC+LIQI++ETAYIQPP DQ +D PP+IRPAF+HTLKTVET +GSRRYGVI+CDPLVR
Sbjct: 348  KVGCKLIQILIETAYIQPPNDQLDDCPPDIRPAFMHTLKTVETVKGSRRYGVIQCDPLVR 407

Query: 2322 KGLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQL 2143
            KGL++TA+HMVIPYMPMLVPP NW+G+DRGAYLFLPSYIMRTHGAKQQREA++R PK+QL
Sbjct: 408  KGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPKKQL 467

Query: 2142 EPVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKEIRK 1963
            EPVFQAL+TLG+TKWRVNKRVLG++DRIWASGGRLADLVDR+D+PLPEEPDTEDE+EI+K
Sbjct: 468  EPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEEPDTEDEEEIKK 527

Query: 1962 WKRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHLNHL 1783
            WK KV   KKEN ERHSQRCDIELKLAV RKMKDEEGF+YPHNLDFRGRAYPMHP+LNHL
Sbjct: 528  WKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 587

Query: 1782 GSDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSA 1603
            GSDLCRGILEF+EGRPLGKSGL WLKIHLANVYGGGVDKLS+EGRAAF+ENH+EDIFDSA
Sbjct: 588  GSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRAAFSENHVEDIFDSA 647

Query: 1602 DRPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALG 1423
            DRPLEGRRWWL AEDPFQCLATC+N+SEALRSPSPET++SH+PIHQDGSCNGLQHYAALG
Sbjct: 648  DRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETSISHMPIHQDGSCNGLQHYAALG 707

Query: 1422 RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQVDRKL 1243
            RDKLGAAAVNLVAG+KPADVYSGIAARVLDIM+RDA +DPA+DPNV+RARLLINQVDRKL
Sbjct: 708  RDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKL 767

Query: 1242 VKQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFEAAR 1063
            VKQTVMTSVYGVTYIGARDQI RRLKERG I+D+ ELFSAACYAAKTTLTALGEMFEAAR
Sbjct: 768  VKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFSAACYAAKTTLTALGEMFEAAR 827

Query: 1062 SIMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMA 883
            SIMSWLGDCAK+IAMENQPV+WTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVM 
Sbjct: 828  SIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMV 887

Query: 882  KRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFV 703
            KRQRTAFPPNFVHSLDGSHMMMTAI C+EAGL+FAGVHDSYWTHA DVDQMNKILR+KFV
Sbjct: 888  KRQRTAFPPNFVHSLDGSHMMMTAITCKEAGLSFAGVHDSYWTHASDVDQMNKILREKFV 947

Query: 702  ELYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            ELY+APILENLL++FQ+S         PERGDFDLREVLESPYFFN
Sbjct: 948  ELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Solanum
            lycopersicum]
          Length = 993

 Score = 1470 bits (3806), Expect = 0.0
 Identities = 743/1006 (73%), Positives = 832/1006 (82%), Gaps = 21/1006 (2%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHF--FSPSFAYKIFLQDY-------------------NFN 3403
            MWRYI+KQ   R  + T ++ F  F+ SF     LQ                       N
Sbjct: 1    MWRYISKQVYSRKLRNTHDSDFLGFAQSFRKTRPLQGLCEEGYRNPNLGVSQSSIFSRVN 60

Query: 3402 GKTRNYSSGSGLNSQYQEVGFHQSSVLKQKNKEGYRQFGSLSNPCGFGVSGGLRCYXXXX 3223
            GK+R        + +   +GF +SS+  +  K  +R  GSL         G LR Y    
Sbjct: 61   GKSRCLDGMCEDSCRNHYLGFSESSIFSRV-KGDFRVCGSL---------GVLRSYGSAA 110

Query: 3222 XXXXXXXXXEDVDEIQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKI 3043
                      D+DEIQELIEEM ++N+A++ +                 Y++LR+RQ+K+
Sbjct: 111  EAIASTSEE-DIDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGK-YNLLRRRQIKV 168

Query: 3042 ETEAWEQAAKEYEELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRG 2863
            ETEAWE AAKEY+ELL DMCEQKLAPNLPYIKSLFLGWFEPLKDAI AEQ LC +GKNRG
Sbjct: 169  ETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQKLCDEGKNRG 228

Query: 2862 AYAQYFDQLPAEMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRIHRFLEK 2683
            AYA +FDQLPAEMMAVIT              GSARVVQAA HIGEAIEHE RIHRFLEK
Sbjct: 229  AYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEK 288

Query: 2682 TKRKNAMNKNPEEETEPVAKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQV 2503
            TK KNA++ + EE    + K +++LRKKV +LMKKQKL  VRKIVK  D  KPWGQD  V
Sbjct: 289  TK-KNALDGSLEETAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLV 347

Query: 2502 KVGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTVETQRGSRRYGVIECDPLVR 2323
            KVGCRLIQI++ETAYIQPP DQ ED PP+IRPAF+HTLKTV+T +GSRRYGVI+CDPLVR
Sbjct: 348  KVGCRLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTVDTVKGSRRYGVIQCDPLVR 407

Query: 2322 KGLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQL 2143
            KGL++TA+HMVIPYMPMLVPP NW+G+DRGAYLFLPSYIMRTHGAKQQREA++R PK+QL
Sbjct: 408  KGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPKKQL 467

Query: 2142 EPVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKEIRK 1963
            EPVFQAL+TLG+TKWRVNKRVLG++DRIWASGGRLADLVDR+D+PLPEEPDTE+E+EI+K
Sbjct: 468  EPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEEPDTENEEEIKK 527

Query: 1962 WKRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHLNHL 1783
            WK KV   KKEN ERHSQRCDIELKLAV RKMKDEEGF+YPHNLDFRGRAYPMHP+LNHL
Sbjct: 528  WKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 587

Query: 1782 GSDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSA 1603
            GSDLCRGILEF+EGRPLGKSGL WLKIHLANVYGGGVDKLS EGRAAF+ENH+EDIFDSA
Sbjct: 588  GSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSCEGRAAFSENHVEDIFDSA 647

Query: 1602 DRPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALG 1423
            DRPLEGRRWWL AEDPFQCLATC+++SEALRSPSPET++SH+PIHQDGSCNGLQHYAALG
Sbjct: 648  DRPLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSISHMPIHQDGSCNGLQHYAALG 707

Query: 1422 RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQVDRKL 1243
            RDKLGAAAVNLVAG+KPADVYSGIAARVLDIM+RDA +DPA+DPNV+RARLLINQVDRKL
Sbjct: 708  RDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKL 767

Query: 1242 VKQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFEAAR 1063
            VKQTVMTSVYGVTYIGARDQI RRLKERG I+D+ ELF+AACYAAKTTLTALGEMFEAAR
Sbjct: 768  VKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFAAACYAAKTTLTALGEMFEAAR 827

Query: 1062 SIMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMA 883
            SIMSWLGDCAK+IAMENQPV+WTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVM 
Sbjct: 828  SIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMV 887

Query: 882  KRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFV 703
            KRQRTAFPPNFVHSLDGSHMMMTAIAC+EAGL+FAGVHDSYWTHA DVDQMNKILR+KFV
Sbjct: 888  KRQRTAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHASDVDQMNKILREKFV 947

Query: 702  ELYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            ELY+APILENLL++FQ+S         PERGDFDLREVLESPYFFN
Sbjct: 948  ELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1469 bits (3804), Expect = 0.0
 Identities = 735/989 (74%), Positives = 818/989 (82%), Gaps = 4/989 (0%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWR + K A  R  + +S+   FSPS     F     F  K R   S   +NS     G 
Sbjct: 1    MWRNLAKHAYTRRLQLSSQHSSFSPSNCTSRFY----FPDKARALESQDHVNSLRPVAGL 56

Query: 3339 HQSSVLK-QKNKEGYRQFGSLSNPCGF-GVSGGLRCYXXXXXXXXXXXXXEDVDEIQELI 3166
             +  VL  Q+++ G   FG    P  F G+ G  + Y               VDE+QEL+
Sbjct: 57   RRIGVLSFQQDELGRPGFGVTKTPVNFFGLFGYQKGYASAAEAIASEEDMSGVDEVQELV 116

Query: 3165 EEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIETEAWEQAAKEYEELLEDM 2986
            EE+ + +K  +                  K+++LR+RQ+K+ETEAWE+AAKEY ELL DM
Sbjct: 117  EEVNKGDKLEK-------QPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDM 169

Query: 2985 CEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAEMMAVITX 2806
            CEQKLAPNLPYIKSLFLGWFEPL+D I AEQDLCK GKNR AYA YFD LPA+MMAVIT 
Sbjct: 170  CEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITM 229

Query: 2805 XXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRIHRFLEKTKRKNAMNKNPEEETEPVA 2626
                         GSARVVQAACHIGEAIEHEVRI RF+EKTK+K+A + NP+  + PV 
Sbjct: 230  HKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPVT 289

Query: 2625 KAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQVKVGCRLIQIMMETAYIQPP 2446
            K Q+KLRKKV++LMKKQKL  VR+IVK  D SKPWGQDA VKVG RLI++++ETAYIQPP
Sbjct: 290  KEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPP 349

Query: 2445 VDQFEDGPPEIRPAFVHTLKTV--ETQRGSRRYGVIECDPLVRKGLERTAKHMVIPYMPM 2272
             DQ  DGPP+IRPAFVHTLKTV  ETQ+G+RRYGVIECDPLVRKGLE+TA+HMVIPYMPM
Sbjct: 350  ADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPM 409

Query: 2271 LVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLEPVFQALNTLGSTKWRV 2092
            LVPPLNWTG+D+GAYLFLPSY+MR HGA+QQREA++R P++ LEP F+ALNTLG+TKWR+
Sbjct: 410  LVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRI 469

Query: 2091 NKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKEIRKWKRKVNTVKKENSERHS 1912
            NKRVLGVIDRIWASGGRLADLVDR+D+PLPEEPDTEDE EIRKWK KV +VKKENSERHS
Sbjct: 470  NKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHS 529

Query: 1911 QRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPL 1732
            QRCDIELKLAV RKMKDE+GFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPL
Sbjct: 530  QRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPL 589

Query: 1731 GKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSADRPLEGRRWWLNAEDPF 1552
            GKSGL WLKIHLANVY GGVDKLS+EGR AF ENHLEDIFDSADRPLEGRRWWL+AEDPF
Sbjct: 590  GKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPF 649

Query: 1551 QCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 1372
            QCLATC+NLSEALRS SPETT+SH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP
Sbjct: 650  QCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKP 709

Query: 1371 ADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQVDRKLVKQTVMTSVYGVTYIGA 1192
            ADVYSGIAARVLDIM+RDA +DPA++PN LRARLLI+QVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 710  ADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGA 769

Query: 1191 RDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKVIAMEN 1012
            RDQI RRLKER  I DE E+FSA+CYAAKTTLTALGEMFEAARSIMSWLGDCAKVIA EN
Sbjct: 770  RDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASEN 829

Query: 1011 QPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDG 832
             PV+W TPLGLPVVQPYRKLGRHLIKTSLQVL+LQRETDKVM KRQRTAFPPNFVHSLDG
Sbjct: 830  HPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDG 889

Query: 831  SHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVELYEAPILENLLDNFQK 652
            SHMMMTA+AC++AGLNFAGVHDSYWTHACDVD+MN+ILR+KFVELY  PILENLL+ FQK
Sbjct: 890  SHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQK 949

Query: 651  SXXXXXXXXXPERGDFDLREVLESPYFFN 565
            S         PERGDFDLREVLESPYFFN
Sbjct: 950  SFPTLNFPPLPERGDFDLREVLESPYFFN 978


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
            [Nicotiana tabacum]
          Length = 1002

 Score = 1461 bits (3783), Expect = 0.0
 Identities = 733/1012 (72%), Positives = 831/1012 (82%), Gaps = 27/1012 (2%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWRYI+K A  R F+ + ++           F Q  +  GKTR        ++ +  +G 
Sbjct: 1    MWRYISKHAYSRKFRNSHDSALLG-------FSQYSSSFGKTRPLQCLCEESTTHPNLGL 53

Query: 3339 HQSSVL-----KQKNKEGYRQFGSLSNP-------------------CG---FGVSGGLR 3241
             Q+S+      K ++ EG  +  S  NP                   CG    G  G LR
Sbjct: 54   SQNSIFSRISRKVRHLEGICEESS-KNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRLR 112

Query: 3240 CYXXXXXXXXXXXXXEDVDEIQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILR 3061
             Y              D+DEIQELIEEM+++N+A++ +                 Y+ LR
Sbjct: 113  SYGSAAEAIVSTSEE-DIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGK-YNFLR 170

Query: 3060 KRQVKIETEAWEQAAKEYEELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCK 2881
            +RQ+K+ETEAWE+AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPL+DAI AEQ LC 
Sbjct: 171  RRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCD 230

Query: 2880 DGKNRGAYAQYFDQLPAEMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRI 2701
            +GKNRGAYA +FDQLPAEMMAVIT              GSARVVQAA +IGEAIEHE RI
Sbjct: 231  EGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARI 290

Query: 2700 HRFLEKTKRKNAMNKNPEEETEPVAKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPW 2521
            HRFLEKTK+ NA++ + EE    + K +++LRKKV +LMKKQKL  VRKIVK  D  KPW
Sbjct: 291  HRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPW 350

Query: 2520 GQDAQVKVGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTVETQRGSRRYGVIE 2341
            GQD  VKVGCRLIQI+METAYIQPP DQ +DGPP+IRPAFVHTLKTVET +GSRRYGVI+
Sbjct: 351  GQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQ 410

Query: 2340 CDPLVRKGLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRR 2161
            CDPLVRKGL++TA+HMVIPYMPMLVPP +W G+D+G YLFLPSYIMRTHGAKQQREA++R
Sbjct: 411  CDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKR 470

Query: 2160 CPKQQLEPVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTED 1981
             PK+QLEPVFQAL+TLG+TKWRVN++VLG++DRIWASGGRLADLVDR+D+PLPE PDTED
Sbjct: 471  VPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTED 530

Query: 1980 EKEIRKWKRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMH 1801
            E EIRKWK KV  VKKEN ERHSQRCDIELKLAV RKMKDE+GF+YPHNLDFRGRAYPMH
Sbjct: 531  EAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMH 590

Query: 1800 PHLNHLGSDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLE 1621
            P+LNHLGSDLCRGILEFAEGRPLG SGL WLKIHLANVYGGGVDKLS+EGR AF+ENHLE
Sbjct: 591  PYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLE 650

Query: 1620 DIFDSADRPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQ 1441
            DIFDSA+RPLEG+RWWL AEDPFQCLATC+N++EALRSPSPET +S++PIHQDGSCNGLQ
Sbjct: 651  DIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQ 710

Query: 1440 HYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLIN 1261
            HYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVLDIM+RDAA+DPA+DPNV+RARLLIN
Sbjct: 711  HYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLIN 770

Query: 1260 QVDRKLVKQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGE 1081
            QVDRKLVKQTVMTSVYGVTYIGARDQI +RLKERG I+D+ ELF+AACYAAKTTLTALGE
Sbjct: 771  QVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGE 830

Query: 1080 MFEAARSIMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRE 901
            MFEAARSIMSWLGDCAK+IAMEN PV+WTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRE
Sbjct: 831  MFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRE 890

Query: 900  TDKVMAKRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKI 721
            TDKVM KRQRTAFPPNFVHSLDGSHMMMTAIAC+E+GL+FAGVHDSYWTHACDVDQMNKI
Sbjct: 891  TDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKI 950

Query: 720  LRQKFVELYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            LR+KFVELY+APILENLL++FQ+S         PERGDFDLREVLESPYFFN
Sbjct: 951  LREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>ref|XP_009627611.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Nicotiana
            tomentosiformis]
          Length = 1002

 Score = 1461 bits (3781), Expect = 0.0
 Identities = 733/1012 (72%), Positives = 831/1012 (82%), Gaps = 27/1012 (2%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWRYI+K A  R F+ + ++           F Q  +  GKTR        ++ +  +G 
Sbjct: 1    MWRYISKHAYSRKFRNSHDSALLG-------FSQYSSSFGKTRPLQCLCEESTTHPNLGL 53

Query: 3339 HQSSVL-----KQKNKEGYRQFGSLSNP-------------------CG---FGVSGGLR 3241
             Q+S+      K ++ EG  +  S  NP                   CG    G  G LR
Sbjct: 54   SQNSIFSRISRKVRHLEGICEESS-KNPHLGLSQNSIFSSVKGDFRICGKRGSGSLGRLR 112

Query: 3240 CYXXXXXXXXXXXXXEDVDEIQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILR 3061
             Y              D+DEIQELIEEM+++N+A++ +                 Y++LR
Sbjct: 113  SYGSAAEAIVSTSEE-DIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGK-YNLLR 170

Query: 3060 KRQVKIETEAWEQAAKEYEELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCK 2881
            +RQ+K+ETEAWE+AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPL+DAI AEQ LC 
Sbjct: 171  RRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCD 230

Query: 2880 DGKNRGAYAQYFDQLPAEMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRI 2701
            +GKNRGAYA +FDQLPAEMMAVIT              GSARVVQAA +IGEAIEHE RI
Sbjct: 231  EGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARI 290

Query: 2700 HRFLEKTKRKNAMNKNPEEETEPVAKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPW 2521
            HRFLEKTK+ NA++ + EE    + K +++LRKKV  LMKKQKL  VRKIVK  D  KPW
Sbjct: 291  HRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKFLMKKQKLQQVRKIVKQQDDEKPW 350

Query: 2520 GQDAQVKVGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTVETQRGSRRYGVIE 2341
            GQD  VKVGCRLIQI+METAYIQPP DQ +DGPP+IRPAFVHTLKTVET +GSRRYGVI+
Sbjct: 351  GQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQ 410

Query: 2340 CDPLVRKGLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRR 2161
            CDPLVRKGL++TA+HMVIPYMPMLVPP +W G+D+G YLFLPSYIMRTHGAKQQREA++R
Sbjct: 411  CDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKR 470

Query: 2160 CPKQQLEPVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTED 1981
             PK+QLEPVFQAL+TLG+TKWRVN++VLG++DRIWASGGRLADLVDR+D+PLPE PDTED
Sbjct: 471  VPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTED 530

Query: 1980 EKEIRKWKRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMH 1801
            E EIRKWK KV  VKKEN ERHSQRCDIELKLAV RKMKDE+GF+YPHNLDFRGRAYPMH
Sbjct: 531  EAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMH 590

Query: 1800 PHLNHLGSDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLE 1621
            P+LNHLGSDLCRGILEFAEGRPLG SGL WLKIHLANVYGGGVDKLS+EGR AF+ENHLE
Sbjct: 591  PYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLE 650

Query: 1620 DIFDSADRPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQ 1441
            DIFDSA+RPLEG+RWWL AEDPFQCLATC+N++EALRSPSPET +S++PIHQDGSCNGLQ
Sbjct: 651  DIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQ 710

Query: 1440 HYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLIN 1261
            HYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVLDIM+RDAA+DPA+DPNV+RARLLIN
Sbjct: 711  HYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLIN 770

Query: 1260 QVDRKLVKQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGE 1081
            QVDRKLVKQTVMTSVYGVTYIGARDQI +RLKERG I+D+ ELF+AACYAAKTTLTALGE
Sbjct: 771  QVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGE 830

Query: 1080 MFEAARSIMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRE 901
            MFEAARSIMSWLGDCAK+IAMEN PV+WTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRE
Sbjct: 831  MFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRE 890

Query: 900  TDKVMAKRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKI 721
            TDKVM KRQRTAFPPNFVHSLDGSHMMMTAIAC+E+GL+FAGVHDSYWTHACDVDQMNKI
Sbjct: 891  TDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKI 950

Query: 720  LRQKFVELYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            LR+KFVELY+APILENLL++FQ+S         PERGDFDLREVLESPYFFN
Sbjct: 951  LREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score = 1459 bits (3778), Expect = 0.0
 Identities = 732/1012 (72%), Positives = 831/1012 (82%), Gaps = 27/1012 (2%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWRYI+K A  R F+ + ++           F Q  +  GKTR        ++ +  +G 
Sbjct: 1    MWRYISKHAYSRKFRNSHDSALLG-------FSQYSSSFGKTRPLQCLCEESTTHPNLGL 53

Query: 3339 HQSSVL-----KQKNKEGYRQFGSLSNP-------------------CG---FGVSGGLR 3241
             Q+S+      K ++ EG  +  S  NP                   CG    G  G LR
Sbjct: 54   SQNSIFSRISRKVRHLEGICEESS-KNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRLR 112

Query: 3240 CYXXXXXXXXXXXXXEDVDEIQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILR 3061
             Y              D+DEIQELIEEM+++N+A++ +                 Y+ LR
Sbjct: 113  SYGSAAEAIVSTSEE-DIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGK-YNFLR 170

Query: 3060 KRQVKIETEAWEQAAKEYEELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCK 2881
            +RQ+K+ETEAWE+AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPL+DAI AEQ LC 
Sbjct: 171  RRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCD 230

Query: 2880 DGKNRGAYAQYFDQLPAEMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRI 2701
            +GKNRGAYA +FDQLPAEMMAVIT              GSARVVQAA +IGEAIEHE RI
Sbjct: 231  EGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARI 290

Query: 2700 HRFLEKTKRKNAMNKNPEEETEPVAKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPW 2521
            HRFLEKTK+ NA++ + EE    + K +++LRKKV +LMKKQKL  VRKIVK  D  KPW
Sbjct: 291  HRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPW 350

Query: 2520 GQDAQVKVGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTVETQRGSRRYGVIE 2341
            GQD  VKVGCRLIQI+METAYIQPP DQ +DGPP+IRPAFVHTLKTVET +GSRRYGVI+
Sbjct: 351  GQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRRYGVIQ 410

Query: 2340 CDPLVRKGLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRR 2161
            CDPLVRKGL++TA+HMVIPYMPMLVPP +W G+D+G YLFLPSYIMRTHGAKQQREA++R
Sbjct: 411  CDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKR 470

Query: 2160 CPKQQLEPVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTED 1981
             PK+QLEPVFQAL+TLG+TKWRVN++VLG+++RIWASGGRLADLVDR+D+PLPE PDTED
Sbjct: 471  VPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVPLPEAPDTED 530

Query: 1980 EKEIRKWKRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMH 1801
            E EIRKWK KV  VKKEN ERHSQRCDIELKLAV RKMKDE+GF+YPHNLDFRGRAYPMH
Sbjct: 531  EAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMH 590

Query: 1800 PHLNHLGSDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLE 1621
            P+LNHLGSDLCRGILEFAEGRPLG SGL WLKIHLANVYGGGVDKLS+EGR AF+ENHLE
Sbjct: 591  PYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLE 650

Query: 1620 DIFDSADRPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQ 1441
            DIFDSA+RPLEG+RWWL AEDPFQCLATC+N++EALRSPSPET +S++PIHQDGSCNGLQ
Sbjct: 651  DIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQ 710

Query: 1440 HYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLIN 1261
            HYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVLDIM+RDAA+DPA+DPNV+RARLLIN
Sbjct: 711  HYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLIN 770

Query: 1260 QVDRKLVKQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGE 1081
            QVDRKLVKQTVMTSVYGVTYIGARDQI +RLKERG I+D+ ELF+AACYAAKTTLTALGE
Sbjct: 771  QVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGE 830

Query: 1080 MFEAARSIMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRE 901
            MFEAARSIMSWLGDCAK+IAMEN PV+WTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRE
Sbjct: 831  MFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRE 890

Query: 900  TDKVMAKRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKI 721
            TDKVM KRQRTAFPPNFVHSLDGSHMMMTAIAC+E+GL+FAGVHDSYWTHACDVDQMNKI
Sbjct: 891  TDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKI 950

Query: 720  LRQKFVELYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            LR+KFVELY+APILENLL++FQ+S         PERGDFDLREVLESPYFFN
Sbjct: 951  LREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
            Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 1; Flags: Precursor [Nicotiana
            sylvestris] gi|15824083|dbj|BAB69431.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1002

 Score = 1455 bits (3767), Expect = 0.0
 Identities = 730/1005 (72%), Positives = 830/1005 (82%), Gaps = 20/1005 (1%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHF-----FSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQY 3355
            MWRYI+KQA  R F+ + ++       +S SF     LQ       T N + G   NS +
Sbjct: 1    MWRYISKQAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCL-CEESTTNPNLGLSQNSIF 59

Query: 3354 QEVGF---HQSSVLKQKNKE---GYRQ---FGSLSNPC------GFGVSGGLRCYXXXXX 3220
              +     H   + ++ +K    G  Q   F S+          G G  G LR Y     
Sbjct: 60   SRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSAAE 119

Query: 3219 XXXXXXXXEDVDEIQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIE 3040
                     D+DEIQELIEEM ++N+A++ +                 Y++LR+RQ+K+E
Sbjct: 120  AIASTSEE-DIDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGK-YNLLRRRQIKVE 177

Query: 3039 TEAWEQAAKEYEELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGA 2860
            TEAWE+AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPL+DAI AEQ LC +GKNRGA
Sbjct: 178  TEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGA 237

Query: 2859 YAQYFDQLPAEMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRIHRFLEKT 2680
            YA +FDQLPAEMMAVIT              GSARVVQAA HIGEAIEHE RIHRFLEKT
Sbjct: 238  YAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKT 297

Query: 2679 KRKNAMNKNPEEETEPVAKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQVK 2500
            K+ NA++ + E+    + K ++++RKKV +LMKKQKL  VRKIVK  D  KPWGQD  VK
Sbjct: 298  KKSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVK 357

Query: 2499 VGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTVETQRGSRRYGVIECDPLVRK 2320
            VGCRLIQI+METAYIQPP DQ +D PP+IRPAFVHTLKTVET +GSRRYGVI+CDPLVRK
Sbjct: 358  VGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRK 417

Query: 2319 GLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLE 2140
            GL++TA+HMVIPYMPMLVPP +W G+D+GAYLFLPSYIMRTHGAKQQREA++R PK+QLE
Sbjct: 418  GLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLE 477

Query: 2139 PVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKEIRKW 1960
            PVFQAL+TLG+TKWR+N++VLG++DRIWASGGRLADLVDR+D+PLPEEPD EDE +IRKW
Sbjct: 478  PVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKW 537

Query: 1959 KRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLG 1780
            K KV  VKKEN ERHSQRCDIELKLAV RKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLG
Sbjct: 538  KWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLG 597

Query: 1779 SDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSAD 1600
            SDLCRGILEFAEGRPLGKSGL WLKIHLANVYGGGVDKLS+EGR AF+ENH+EDIFDSA+
Sbjct: 598  SDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAE 657

Query: 1599 RPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGR 1420
            RPLEG+RWWL AEDPFQCLATC+N++EALRSPSPET +S++PIHQDGSCNGLQHYAALGR
Sbjct: 658  RPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGR 717

Query: 1419 DKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQVDRKLV 1240
            D LGAAAVNLVAG+KPADVYSGIAARVLDIM+RDAA+DPA+DPNV+RARLLINQVDRKLV
Sbjct: 718  DTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLV 777

Query: 1239 KQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFEAARS 1060
            KQTVMTSVYGVTYIGARDQI RRLKERG I+D+ ELF+AACYAAKTTLTALGEMFEAARS
Sbjct: 778  KQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARS 837

Query: 1059 IMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMAK 880
            IMSWLGDCAK+IAMEN PV+WTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVM K
Sbjct: 838  IMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVK 897

Query: 879  RQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVE 700
            RQRTAFPPNFVHSLDGSHMMMTAIAC+E+GL+FAGVHDSYWTHA DVDQMNKILR+KFVE
Sbjct: 898  RQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVE 957

Query: 699  LYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            LY+APILENLL++FQ+S         PERGDFDLREVLESPYFFN
Sbjct: 958  LYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>ref|NP_001289502.1| DNA-directed RNA polymerase 1, mitochondrial [Nicotiana sylvestris]
            gi|21425663|emb|CAC95019.1| mitochondrial RNA polymerase
            [Nicotiana sylvestris]
          Length = 1002

 Score = 1454 bits (3765), Expect = 0.0
 Identities = 730/1005 (72%), Positives = 829/1005 (82%), Gaps = 20/1005 (1%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHF-----FSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQY 3355
            MWRYI+K A  R F+ + ++       +S SF     LQ       T N + G   NS +
Sbjct: 1    MWRYISKHAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCL-CEESTTNPNLGLSQNSIF 59

Query: 3354 QEVGF---HQSSVLKQKNKE---GYRQ---FGSLSNPC------GFGVSGGLRCYXXXXX 3220
              +     H   + ++ +K    G  Q   F S+          G G  G LR Y     
Sbjct: 60   SRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSAAE 119

Query: 3219 XXXXXXXXEDVDEIQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIE 3040
                     D+DEIQELIEEM ++N+A++ +                 Y++LR+RQ+K+E
Sbjct: 120  AIASTSEE-DIDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGK-YNLLRRRQIKVE 177

Query: 3039 TEAWEQAAKEYEELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGA 2860
            TEAWE+AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPL+DAI AEQ LC +GKNRGA
Sbjct: 178  TEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGA 237

Query: 2859 YAQYFDQLPAEMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRIHRFLEKT 2680
            YA +FDQLPAEMMAVIT              GSARVVQAA HIGEAIEHE RIHRFLEKT
Sbjct: 238  YAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKT 297

Query: 2679 KRKNAMNKNPEEETEPVAKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQVK 2500
            K+ NA++ + E+    + K +++LRKKV +LMKKQKL  VRKIVK  D  KPWGQD  VK
Sbjct: 298  KKSNALSGDLEDTPGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVK 357

Query: 2499 VGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTVETQRGSRRYGVIECDPLVRK 2320
            VGCRLIQI+METAYIQPP DQ +D PP+IRPAFVHTLKTVET +GSRRYGVI+CDPLVRK
Sbjct: 358  VGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRK 417

Query: 2319 GLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLE 2140
            GL++TA+HMVIPYMPMLVPP +W G+D+GAYLFLPSYIMRTHGAKQQREA++R PK+QLE
Sbjct: 418  GLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLE 477

Query: 2139 PVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKEIRKW 1960
            PVFQAL+TLG+TKWR+N++VLG++DRIWASGGRLADLVDR+D+PLPEEPD EDE +IRKW
Sbjct: 478  PVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKW 537

Query: 1959 KRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLG 1780
            K KV  VKKEN ERHSQRCDIELKLAV RKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLG
Sbjct: 538  KWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLG 597

Query: 1779 SDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSAD 1600
            SDLCRGILEFAEGRPLGKSGL WLKIHLANVYGGGVDKLS+EGR AF+ENH+EDIFDSA+
Sbjct: 598  SDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAE 657

Query: 1599 RPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGR 1420
            RPLEG+RWWL AEDPFQCLATC+N++EALRSPSPET +S++PIHQDGSCNGLQHYAALGR
Sbjct: 658  RPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGR 717

Query: 1419 DKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQVDRKLV 1240
            D LGAAAVNLVAG+KPADVYSGIAARVLDIM+RDAA+DPA+DPNV+RARLLINQVDRKLV
Sbjct: 718  DTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLV 777

Query: 1239 KQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFEAARS 1060
            KQTVMTSVYGVTYIGARDQI RRLKERG I+D+ ELF+AACYAAKTTLTALGEMFEAARS
Sbjct: 778  KQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARS 837

Query: 1059 IMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMAK 880
            IMSWLGDCAK+IAMEN PV+WTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVM K
Sbjct: 838  IMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVK 897

Query: 879  RQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVE 700
            RQRTAFPPNFVHSLDGSHMMMTAIAC+E+GL+FAGVHDSYWTHA DVDQMNKILR+KFVE
Sbjct: 898  RQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVE 957

Query: 699  LYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            LY+APILENLL++FQ+S         PERGDFDLREVLESPYFFN
Sbjct: 958  LYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris]
          Length = 1002

 Score = 1451 bits (3755), Expect = 0.0
 Identities = 729/1005 (72%), Positives = 828/1005 (82%), Gaps = 20/1005 (1%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHF-----FSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQY 3355
            MWRYI+KQA  R F+ + ++       +S SF     LQ       T N + G   NS +
Sbjct: 1    MWRYISKQAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCL-CEESTTNPNLGLSQNSIF 59

Query: 3354 QEVGF---HQSSVLKQKNKE---GYRQ---FGSLSNPC------GFGVSGGLRCYXXXXX 3220
              +     H   + ++ +K    G  Q   F S+          G G  G LR Y     
Sbjct: 60   SRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSAAE 119

Query: 3219 XXXXXXXXEDVDEIQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIE 3040
                     D DEIQELIEEM ++N+A++ +                 Y++LR+RQ+K+E
Sbjct: 120  AIASTSEE-DTDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGK-YNLLRRRQIKVE 177

Query: 3039 TEAWEQAAKEYEELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGA 2860
            TEAWE+AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPL+DAI AEQ LC +GKNRGA
Sbjct: 178  TEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGA 237

Query: 2859 YAQYFDQLPAEMMAVITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRIHRFLEKT 2680
             A +FDQLPAEMMAVIT              GSARVVQAA HIGEAIEHE RIHRFLEKT
Sbjct: 238  CAPFFDQLPAEMMAVITMHKLMGWLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKT 297

Query: 2679 KRKNAMNKNPEEETEPVAKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQVK 2500
            K+ NA++ + E+    + K ++++RKKV +LMKKQKL  VRKIVK  D  KPWGQD  VK
Sbjct: 298  KKSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVK 357

Query: 2499 VGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTVETQRGSRRYGVIECDPLVRK 2320
            VGCRLIQI+METAYIQPP DQ +D PP+IRPAFVHTLKTVET +GSRRYGVI+CDPLVRK
Sbjct: 358  VGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRK 417

Query: 2319 GLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLE 2140
            GL++TA+HMVIPYMPMLVPP +W G+D+GAYLFLPSYIMRTHGAKQQREA++R PK+QLE
Sbjct: 418  GLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLE 477

Query: 2139 PVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKEIRKW 1960
            PVFQAL+TLG+TKWR+N++VLG++DRIWASGGRLADLVDR+D+PLPEEPD EDE +IRKW
Sbjct: 478  PVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKW 537

Query: 1959 KRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLG 1780
            K KV  VKKEN ERHSQRCDIELKLAV RKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLG
Sbjct: 538  KWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLG 597

Query: 1779 SDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSAD 1600
            SDLCRGILEFAEGRPLGKSGL WLKIHLANVYGGGVDKLS+EGR AF+ENH+EDIFDSA+
Sbjct: 598  SDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAE 657

Query: 1599 RPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGR 1420
            RPLEG+RWWL AEDPFQCLATC+N++EALRSPSPET +S++PIHQDGSCNGLQHYAALGR
Sbjct: 658  RPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGR 717

Query: 1419 DKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQVDRKLV 1240
            D LGAAAVNLVAG+KPADVYSGIAARVLDIM+RDAA+DPA+DPNV+RARLLINQVDRKLV
Sbjct: 718  DTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLV 777

Query: 1239 KQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFEAARS 1060
            KQTVMTSVYGVTYIGARDQI RRLKERG I+D+ ELF+AACYAAKTTLTALGEMFEAARS
Sbjct: 778  KQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARS 837

Query: 1059 IMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMAK 880
            IMSWLGDCAK+IAMEN PV+WTTPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKVM K
Sbjct: 838  IMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVK 897

Query: 879  RQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVE 700
            RQRTAFPPNFVHSLDGSHMMMTAIAC+E+GL+FAGVHDSYWTHA DVDQMNKILR+KFVE
Sbjct: 898  RQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVE 957

Query: 699  LYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            LY+APILENLL++FQ+S         PERGDFDLREVLESPYFFN
Sbjct: 958  LYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1447 bits (3747), Expect = 0.0
 Identities = 725/993 (73%), Positives = 818/993 (82%), Gaps = 8/993 (0%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWR+I ++ASL   + + ++     +F +  F QD   N  TR +   S ++ ++ E  F
Sbjct: 40   MWRHIARRASLTKVRLSRDSSSILRTFGFMGFSQDSILNDTTRPFELKSSMSFRFSERSF 99

Query: 3339 HQSSVLKQKNKE-GYRQFGSLSNPCGFG-VSGGLRCYXXXXXXXXXXXXXED---VDEIQ 3175
             ++  L  K  E G    G   NP     +S   + Y             ED   +DEIQ
Sbjct: 100  LRNGELPSKEDELGRPILGCFRNPISPPRLSNHPKGYASVAEAVCSMDAEEDLSAIDEIQ 159

Query: 3174 ELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIETEAWEQAAKEYEELL 2995
            EL+EEM ++ K  E+                 KY +LR+RQVKIETEAWEQAAKEY ELL
Sbjct: 160  ELLEEMGKEEKK-ELELRDQKQIKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYRELL 218

Query: 2994 EDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAEMMAV 2815
             DMCEQKLAPNLPY+KSLFLGWFEPL+D IVAEQ+LC+ GKNR AYA YFDQLPAEMM+V
Sbjct: 219  MDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKNRTAYAPYFDQLPAEMMSV 278

Query: 2814 ITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRIHRFLEKTKRKNAMNKNPEE-ET 2638
            IT              GS RVVQAAC IGEAIE+EVRIH+FLEKT++K   +K  +  E+
Sbjct: 279  ITMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVRIHKFLEKTRKKTDKDKKADGGES 338

Query: 2637 EPVAKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQVKVGCRLIQIMMETAY 2458
            +PV K Q +LRKKV  LMKKQKL  VR+IVK  D SKPWGQDAQ KVG RLI+++M+TAY
Sbjct: 339  DPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQDDSKPWGQDAQAKVGSRLIELLMQTAY 398

Query: 2457 IQPPVDQFEDGPPEIRPAFVHTLKTV--ETQRGSRRYGVIECDPLVRKGLERTAKHMVIP 2284
            IQPPVDQ  DGPP+IRPAF H+LKTV  E Q+ SRRYGVIECDPLVRKGLERTA+HMVIP
Sbjct: 399  IQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRRYGVIECDPLVRKGLERTARHMVIP 458

Query: 2283 YMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLEPVFQALNTLGST 2104
            YMPMLVPP+NWTG+D+GAYLFLPSY+MRTHGA+QQREA++R P++QLEPVF+AL+TLG+T
Sbjct: 459  YMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFEALDTLGNT 518

Query: 2103 KWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKEIRKWKRKVNTVKKENS 1924
            KWRVNKRVL V+DRIWASGGRLADLVDR+D+P+PEEPDTEDE EI+KWK KV   KKENS
Sbjct: 519  KWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDTEDEAEIKKWKWKVKAAKKENS 578

Query: 1923 ERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAE 1744
            ERHSQRCDIELKLAV R+MKDE+GFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAE
Sbjct: 579  ERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAE 638

Query: 1743 GRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSADRPLEGRRWWLNA 1564
            GRPLGKSGL WLKIHLAN+Y GGVDKLS+EGR AF ENHL+DIFDSADRPLEGRRWWLNA
Sbjct: 639  GRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLNA 698

Query: 1563 EDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGRDKLGAAAVNLVA 1384
            EDPFQCLA C+NLSEALRS SPETT+SH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVA
Sbjct: 699  EDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVA 758

Query: 1383 GEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQVDRKLVKQTVMTSVYGVT 1204
            GEKPADVYSGIAARVLDIMRRDA +DP + PN + AR+LINQVDRKLVKQTVMTSVYGVT
Sbjct: 759  GEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARILINQVDRKLVKQTVMTSVYGVT 818

Query: 1203 YIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKVI 1024
            YIGARDQI RRLKER  I D++ELF A+CYAAKTTLTALGEMFEAARSIMSWLGDCAK+I
Sbjct: 819  YIGARDQIKRRLKERNVIADDSELFGASCYAAKTTLTALGEMFEAARSIMSWLGDCAKII 878

Query: 1023 AMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVH 844
            A ENQPV+WTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVM KRQRTAFPPNFVH
Sbjct: 879  ASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVH 938

Query: 843  SLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVELYEAPILENLLD 664
            SLDGSHMMMTA+ACR+AGLNFAGVHDSYWTHACD+D+MNKILR+KFVELYE PILENLL+
Sbjct: 939  SLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDIDEMNKILREKFVELYEKPILENLLE 998

Query: 663  NFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            +FQ+S         PERGDFDLREVL+SPYFFN
Sbjct: 999  SFQQSFPTLNFPPLPERGDFDLREVLDSPYFFN 1031


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1421 bits (3679), Expect = 0.0
 Identities = 712/993 (71%), Positives = 809/993 (81%), Gaps = 8/993 (0%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWR I KQA   NF F+ ++     +F    + Q   F+ K R +   S +N+ + E  F
Sbjct: 1    MWRNIVKQACSTNF-FSRDSSSMLRTFGVVGYSQYPVFHDKARQFEFKSSINAGFSESCF 59

Query: 3339 HQSSVLKQKNKE-GYRQFGSLSNPCGFG-VSGGLRCYXXXXXXXXXXXXXEDV---DEIQ 3175
             ++     K  + G   FG   N  G    S   + Y             EDV   DEIQ
Sbjct: 60   LRNGESPSKEDDLGILSFGCFRNSMGLSRFSNHPKGYASVAEVLSSTDAEEDVSVVDEIQ 119

Query: 3174 ELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIETEAWEQAAKEYEELL 2995
            EL+EEM ++ K +E S+                Y +LR+RQVKIETEAWEQAAKEY+ELL
Sbjct: 120  ELLEEMSKEEKELEFSHQKQTKLVGGMGQGK--YLLLRRRQVKIETEAWEQAAKEYKELL 177

Query: 2994 EDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAEMMAV 2815
             DMCEQKLAPNLPY+KSLFLGWFEPL+D I AEQ+LC+ GKNR AYA YFDQLPAEMM+V
Sbjct: 178  MDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYAPYFDQLPAEMMSV 237

Query: 2814 ITXXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRIHRFLEKTKRKNAMNKNPEE-ET 2638
            IT              GSARVVQAAC IG+AIE+EVRI++FLEKTK+K   +K  E  E+
Sbjct: 238  ITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKFLEKTKKKTDKDKKAEGGES 297

Query: 2637 EPVAKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQVKVGCRLIQIMMETAY 2458
            +P  K Q +LRKKV  LMKKQKL  VR+IVK  D SKPWGQDAQ KVG  LI+++M+TAY
Sbjct: 298  DPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKPWGQDAQAKVGSHLIELLMQTAY 357

Query: 2457 IQPPVDQFEDGPPEIRPAFVHTLKTV--ETQRGSRRYGVIECDPLVRKGLERTAKHMVIP 2284
            IQ P DQ  DGPP+IRPAF HTLKT+  E+Q+ SRRYG+IECDPLVRKGLERTA+HMVIP
Sbjct: 358  IQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVRKGLERTARHMVIP 417

Query: 2283 YMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLEPVFQALNTLGST 2104
            YMPMLVPPLNWTG+D+GAYLFLPSY+MRTHGA+QQREA++R  ++QLEP+F+AL+TLG+T
Sbjct: 418  YMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQLEPIFEALDTLGNT 477

Query: 2103 KWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKEIRKWKRKVNTVKKENS 1924
            KWR+NKRVLGV+DRIWASGGRLADLVDR+D+PLPEEP+TEDE E++KWK KV  VKKENS
Sbjct: 478  KWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKKWKWKVKAVKKENS 537

Query: 1923 ERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAE 1744
            ERHSQRCD ELKLAV R+MKDE GFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAE
Sbjct: 538  ERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAE 597

Query: 1743 GRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSADRPLEGRRWWLNA 1564
            GRPLGKSGL WLKIHLAN+Y GGVDKLS+EGR AF ENHL+DIFDSADRPLEGRRWWLNA
Sbjct: 598  GRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLNA 657

Query: 1563 EDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGRDKLGAAAVNLVA 1384
            +DPFQCLA C+NLSEALRS SPET +SH+PIHQDGSCNGLQHYAALGRDKLGAAAVNLVA
Sbjct: 658  DDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVA 717

Query: 1383 GEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQVDRKLVKQTVMTSVYGVT 1204
            G+KPADVYSG+AARVLDIMRRDA +DP ++PN + ARLLINQVDRKLVKQTVMTSVYGVT
Sbjct: 718  GDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLLINQVDRKLVKQTVMTSVYGVT 777

Query: 1203 YIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKVI 1024
            YIGARDQI RRLKER  I DE+ELF A+CYAAKTT+TALGEMF+AARSIMSWLGDCAK+I
Sbjct: 778  YIGARDQIKRRLKERNAIADESELFGASCYAAKTTITALGEMFKAARSIMSWLGDCAKII 837

Query: 1023 AMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVH 844
            A ENQPV+WTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVM KRQRTAFPPNF+H
Sbjct: 838  ASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFIH 897

Query: 843  SLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVELYEAPILENLLD 664
            SLDGSHMMMTA+AC+ AGLNFAGVHDS+WTHACDVD+MNKILR+KFVELYE PI+ENLL+
Sbjct: 898  SLDGSHMMMTAVACKRAGLNFAGVHDSFWTHACDVDEMNKILREKFVELYETPIMENLLE 957

Query: 663  NFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            +FQ+S         PE GDFDL EVL SPYFFN
Sbjct: 958  SFQQSFPALSFPPLPECGDFDLHEVLVSPYFFN 990


>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
            gi|462422319|gb|EMJ26582.1| hypothetical protein
            PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score = 1417 bits (3667), Expect = 0.0
 Identities = 702/1009 (69%), Positives = 816/1009 (80%), Gaps = 24/1009 (2%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWR + KQ + R    +S++HF SPS    IF Q+ +F  K R++ +   +N++   +GF
Sbjct: 1    MWRNLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGF 60

Query: 3339 HQSSVLKQKNKEGYRQFGSLSNPCGFGVSG------GLRCYXXXXXXXXXXXXXEDVDEI 3178
             Q   +  + KE   +  SL+    +G+SG      G                    +EI
Sbjct: 61   RQVGDMASQ-KEELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEEDSSGSEEI 119

Query: 3177 QELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIETEAWEQAAKEYEEL 2998
            QE++E++ R+N  +E  +                Y++LRKRQ+K+ETEAW++AAKEY+EL
Sbjct: 120  QEMLEDLIRENNMVESHFKQPKRVVVGMGVGK--YNLLRKRQIKLETEAWQEAAKEYQEL 177

Query: 2997 LEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAEMMA 2818
            L DMCEQKLAPNLPYIKSLFLGWFEPL+DAI A+QD CK   +R ++A YFD LPA+ MA
Sbjct: 178  LADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPADKMA 237

Query: 2817 VITXXXXXXXXXXXXXXG-SARVVQAACHIGEAIEHEVRIHRFLEKTKRK-NAMNKNPEE 2644
            VIT                S RVVQAAC IGEAIEHEVRIHRFLEKTK+K N ++K  E 
Sbjct: 238  VITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTIDKKAEA 297

Query: 2643 ETEPVA--------------KAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQ 2506
            ++ PV               K Q++LRKKVN L+K+QK+  VR IVK  +  KPWGQ+A 
Sbjct: 298  DSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQEAH 357

Query: 2505 VKVGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTV--ETQRGSRRYGVIECDP 2332
            VKVGCRLIQ++M+TAYIQPPVDQ  DGPP+IRPAFVH LKT+  +TQ+ SRRYGVIECDP
Sbjct: 358  VKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGVIECDP 417

Query: 2331 LVRKGLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPK 2152
            +VRKG+E+TA+HMV+PYMPMLVPP+NWTG+DRGAYLFLPSY+MRTHGAKQQRE ++R P+
Sbjct: 418  IVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTPR 477

Query: 2151 QQLEPVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKE 1972
            +QLEPVF+AL+TLGSTKWRVNKRVLGVIDRIWASGGRLADLVDR+D+PLPEEPDTEDE E
Sbjct: 478  KQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAE 537

Query: 1971 IRKWKRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHL 1792
            IRKWK K+   KKENSERHSQRCDIELKLA  RKMKDEEGF+YPHNLDFRGRAYPMHP+L
Sbjct: 538  IRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHPYL 597

Query: 1791 NHLGSDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIF 1612
            NHLGSD+CRGILEF+EGR LGKSGL WLKIHLAN+Y GGVDKLS + RAAF ENH+++IF
Sbjct: 598  NHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHVDEIF 657

Query: 1611 DSADRPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYA 1432
            DSADRPLEGRRWWL AEDPFQCLA C+NL EALRSPSPETT+S++P+HQDGSCNGLQHYA
Sbjct: 658  DSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHYA 717

Query: 1431 ALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQVD 1252
            ALGRDKLGAAAVNLV G+KPADVYSGIAARVLDIMR DA +DPA++PN L ARLLINQVD
Sbjct: 718  ALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLINQVD 777

Query: 1251 RKLVKQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFE 1072
            RKLVKQTVMTSVYGVTY+GARDQI RRLKERG+I D+  LF+AACYAA+TTLTALGEMFE
Sbjct: 778  RKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLTALGEMFE 837

Query: 1071 AARSIMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDK 892
            AARSIMSWLG+CAKVIA ENQPV+W TPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETDK
Sbjct: 838  AARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDK 897

Query: 891  VMAKRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQ 712
            VM KRQRTAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTHACD+D+MN+ILR+
Sbjct: 898  VMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRILRE 957

Query: 711  KFVELYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            KFVELYEAPILENLL+ FQ+S         P+RGDFDLR+VLESPYFFN
Sbjct: 958  KFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006


>ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Prunus mume]
          Length = 1006

 Score = 1410 bits (3651), Expect = 0.0
 Identities = 702/1010 (69%), Positives = 815/1010 (80%), Gaps = 25/1010 (2%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWR + KQ + R    +S++HF SPS    IF Q+ +F  K  ++ +   +N++   +GF
Sbjct: 1    MWRNLAKQVASRKTNLSSQSHFSSPSSTSMIFSQESSFLEKAWHFEARKCINNRILVMGF 60

Query: 3339 HQ-SSVLKQKNKEGYRQFGSLSNPCGFGVSG------GLRCYXXXXXXXXXXXXXEDVDE 3181
             Q   +  QK++ G  +  SL+    +G+SG      G                    +E
Sbjct: 61   RQVGDMASQKDELG--RCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEEDSSGSEE 118

Query: 3180 IQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIETEAWEQAAKEYEE 3001
            IQE++E++ R+N  +E  +                Y++LRKRQ+K+ETEAW++AAKEY+E
Sbjct: 119  IQEMLEDLIRENNMVESHFKQPKRVVVGMGVGK--YNLLRKRQIKLETEAWQEAAKEYQE 176

Query: 3000 LLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAEMM 2821
            LL DMCEQKLAPNLPYIKSLFLGWFEPL+DAI A+QD CK   +R ++A YFD LPA+ M
Sbjct: 177  LLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQTNSRQSHAPYFDHLPADKM 236

Query: 2820 AVITXXXXXXXXXXXXXXG-SARVVQAACHIGEAIEHEVRIHRFLEKTKRK-NAMNKNPE 2647
            AVIT                S RVVQAAC IGEAIEHEVRIHRFLEKTK+K N  +K  E
Sbjct: 237  AVITMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTTDKKAE 296

Query: 2646 EETEPV--------------AKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDA 2509
             ++ PV              A  Q+KLRKKVN L+K+QK+  VR IVK  +  KPWGQ+A
Sbjct: 297  ADSVPVTDEQEKLADEQGKLADEQEKLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQEA 356

Query: 2508 QVKVGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTV--ETQRGSRRYGVIECD 2335
             VKVGCRLIQ++M+TAYIQPPVDQ  DGPP+IRPAFVH LKT+  +TQ+ SRRYGVIECD
Sbjct: 357  HVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITKDTQKTSRRYGVIECD 416

Query: 2334 PLVRKGLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCP 2155
            PLVRKG+++TA+HMV+PYMPMLVPP+NWTG+DRGAYLFLPSY+MRTHGAKQQRE ++R P
Sbjct: 417  PLVRKGMDKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTP 476

Query: 2154 KQQLEPVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEK 1975
            ++QLEPVF+AL+TLGSTKWRVNKRVLGVIDRIWASGGRLADLVDR+D+PLPEEPDTEDE 
Sbjct: 477  RKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEA 536

Query: 1974 EIRKWKRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPH 1795
            EIRKWK K+   KKENSERHSQRCDIELKLA  RKMKDEEGF+YPHNLDFRGRAYPMHP+
Sbjct: 537  EIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHPY 596

Query: 1794 LNHLGSDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDI 1615
            LNHLGSD+CRGILEF+EGR LGKSGL WLKIHLAN+Y GGVDKLS + RAAF ENH+++I
Sbjct: 597  LNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHVDEI 656

Query: 1614 FDSADRPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHY 1435
            FDSADRPLEGRRWWL AEDPFQCLA C+NL EALRSPSPETT+S++P+HQDGSCNGLQHY
Sbjct: 657  FDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHY 716

Query: 1434 AALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQV 1255
            AALGRDKLGAAAVNLV G+KPADVYSGIAARVLDIMR DA +DPA++PN L ARLLINQV
Sbjct: 717  AALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLINQV 776

Query: 1254 DRKLVKQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMF 1075
            DRKLVKQTVMTSVYGVTY+GAR+QI RRLKERG+I D+  LF AACYAA+TTLTALGEMF
Sbjct: 777  DRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGSIADDTALFVAACYAARTTLTALGEMF 836

Query: 1074 EAARSIMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETD 895
            EAARSIMSWLG+CAKVIA ENQPV+W TPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETD
Sbjct: 837  EAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 896

Query: 894  KVMAKRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILR 715
            KVM KRQRTAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTHACD+D+MN+ILR
Sbjct: 897  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRILR 956

Query: 714  QKFVELYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            +KFVELYEAPILENLL+ FQ+S         P+RGDFDLR+VLESPYFFN
Sbjct: 957  EKFVELYEAPILENLLEGFQRSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score = 1392 bits (3603), Expect = 0.0
 Identities = 675/810 (83%), Positives = 734/810 (90%), Gaps = 2/810 (0%)
 Frame = -3

Query: 2988 MCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAEMMAVIT 2809
            MCEQKLAPNLPYIKSLFLGWFEPL+D I AEQDLCK GKNR AYA YFD LPA+MMAVIT
Sbjct: 1    MCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVIT 60

Query: 2808 XXXXXXXXXXXXXXGSARVVQAACHIGEAIEHEVRIHRFLEKTKRKNAMNKNPEEETEPV 2629
                          GSARVVQAACHIGEAIEHEVRI RF+EKTK+K+A + NP+  + PV
Sbjct: 61   MHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPV 120

Query: 2628 AKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQDAQVKVGCRLIQIMMETAYIQP 2449
             K Q+KLRKKV++LMKKQKL  VR+IVK  D SKPWGQDA VKVG RLI++++ETAYIQP
Sbjct: 121  TKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQP 180

Query: 2448 PVDQFEDGPPEIRPAFVHTLKTV--ETQRGSRRYGVIECDPLVRKGLERTAKHMVIPYMP 2275
            P DQ  DGPP+IRPAFVHTLKTV  ETQ+G+RRYGVIECDPLVRKGLE+TA+HMVIPYMP
Sbjct: 181  PADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMP 240

Query: 2274 MLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRRCPKQQLEPVFQALNTLGSTKWR 2095
            MLVPPLNWTG+D+GAYLFLPSY+MR HGA+QQREA++R P++ LEP F+ALNTLG+TKWR
Sbjct: 241  MLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWR 300

Query: 2094 VNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTEDEKEIRKWKRKVNTVKKENSERH 1915
            +NKRVLGVIDRIWASGGRLADLVDR+D+PLPEEPDTEDE EIRKWK KV +VKKENSERH
Sbjct: 301  INKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERH 360

Query: 1914 SQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRP 1735
            SQRCDIELKLAV RKMKDE+GFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRP
Sbjct: 361  SQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRP 420

Query: 1734 LGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLEDIFDSADRPLEGRRWWLNAEDP 1555
            LGKSGL WLKIHLANVY GGVDKLS+EGR AF ENHLEDIFDSADRPLEGRRWWL+AEDP
Sbjct: 421  LGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDP 480

Query: 1554 FQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEK 1375
            FQCLATC+NLSEALRS SPETT+SH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEK
Sbjct: 481  FQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEK 540

Query: 1374 PADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLINQVDRKLVKQTVMTSVYGVTYIG 1195
            PADVYSGIAARVLDIM+RDA +DPA++PN LRARLLI+QVDRKLVKQTVMTSVYGVTYIG
Sbjct: 541  PADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIG 600

Query: 1194 ARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKVIAME 1015
            ARDQI RRLKER  I DE E+FSA+CYAAKTTLTALGEMFEAARSIMSWLGDCAKVIA E
Sbjct: 601  ARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASE 660

Query: 1014 NQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLD 835
            N PV+W TPLGLPVVQPYRKLGRHLIKTSLQVL+LQRETDKVM KRQRTAFPPNFVHSLD
Sbjct: 661  NHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLD 720

Query: 834  GSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKILRQKFVELYEAPILENLLDNFQ 655
            GSHMMMTA+AC++AGLNFAGVHDSYWTHACDVD+MN+ILR+KFVELY  PILENLL+ FQ
Sbjct: 721  GSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQ 780

Query: 654  KSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            KS         PERGDFDLREVLESPYFFN
Sbjct: 781  KSFPTLNFPPLPERGDFDLREVLESPYFFN 810


>ref|XP_008389363.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Malus
            domestica]
          Length = 1007

 Score = 1387 bits (3591), Expect = 0.0
 Identities = 695/1012 (68%), Positives = 810/1012 (80%), Gaps = 27/1012 (2%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWR   K+ + R    +S+ H  S + +   F Q+ +F  KTR++ + +  N+++  +GF
Sbjct: 1    MWRNFAKKVASRKXNLSSQFHLGSATSSSVKFYQESSFLEKTRHFEARNCANNRFLVMGF 60

Query: 3339 HQ-SSVLKQKNKEGYRQFGSLSNPCGFGVSGGLRCYXXXXXXXXXXXXXED-------VD 3184
             Q      QK++ G     SL NP       G   Y              D        +
Sbjct: 61   PQIGDKASQKDELGRC---SLMNPSYSHAVSGFCSYARGYASAAEAIASTDGEEDSSGSE 117

Query: 3183 EIQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIETEAWEQAAKEYE 3004
            EIQEL+E++ R+N  +E  +                Y++LRKRQ+K+ETEAWE+AA EY+
Sbjct: 118  EIQELLEDLIRENNKVESHFKQTKKVVGGMGVGK--YNLLRKRQIKLETEAWEEAANEYQ 175

Query: 3003 ELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAEM 2824
            ELL DMCEQKLAPNLPYIKSLFLGWFEPL++AI  +Q+ C+   +R ++A YFD LPA+ 
Sbjct: 176  ELLVDMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPNSRASHAPYFDHLPADK 235

Query: 2823 MAVITXXXXXXXXXXXXXXG-SARVVQAACHIGEAIEHEVRIHRFLEKTKRK-NAMNKNP 2650
            MAVIT                S RVVQAAC IGEAIE+EVRIHRFLEKTK+K N  +K P
Sbjct: 236  MAVITMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLEKTKKKKNLTDKKP 295

Query: 2649 EEETEPVA---------------KAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQ 2515
            E+E++PVA               K +++LRKKVN L+KKQK+  VR+IVK  +  KPWGQ
Sbjct: 296  EDESDPVAIEQEKLTISEQEKLTKEKERLRKKVNKLIKKQKMKQVREIVKEQEDLKPWGQ 355

Query: 2514 DAQVKVGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTV--ETQRGSRRYGVIE 2341
            +A VKVGCRLIQ++M+TAYIQPPVDQ  D   +IRPAFVH LKTV  +TQ+ SRRYG+IE
Sbjct: 356  EAHVKVGCRLIQLLMDTAYIQPPVDQSGDASLDIRPAFVHVLKTVTKDTQKTSRRYGMIE 415

Query: 2340 CDPLVRKGLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRR 2161
            CDPLV KG+E+TA+HMVIPYMPMLVPP+NWTG+DRGAYLFLPSY+MRTHGAKQQR+ ++R
Sbjct: 416  CDPLVHKGMEKTARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQRQVVKR 475

Query: 2160 CPKQQLEPVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTED 1981
             P+ QLEPVF+AL+TLGSTKWRVNKRVLGVIDRIWA+GG LADLVDR+D+PLPEEPDTED
Sbjct: 476  TPRTQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWANGGHLADLVDREDVPLPEEPDTED 535

Query: 1980 EKEIRKWKRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMH 1801
            E EI+KWK KV   KKENSERHSQRCDIELKLAV RKMKDEEGF+YPHNLDFRGRAYPMH
Sbjct: 536  ETEIKKWKWKVKDAKKENSERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFRGRAYPMH 595

Query: 1800 PHLNHLGSDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLE 1621
            P+LNHLGSD+CRGILEF+EGR LGKSGL WLKIHLAN+Y GGVDKLS +GR AF ENH++
Sbjct: 596  PYLNHLGSDMCRGILEFSEGRRLGKSGLRWLKIHLANLYAGGVDKLSFDGRVAFTENHVD 655

Query: 1620 DIFDSADRPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQ 1441
            +IFDSADR LEGRRWWL AEDPFQCLA C+NL+EALRSPSPETT+S++P+HQDGSCNGLQ
Sbjct: 656  EIFDSADRXLEGRRWWLGAEDPFQCLAACINLAEALRSPSPETTVSYMPVHQDGSCNGLQ 715

Query: 1440 HYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLIN 1261
            HYAALGRDKLGAAAVNLV GEKPADVYSGIAARVLDIMR DA +DPA++PN L ARLL+N
Sbjct: 716  HYAALGRDKLGAAAVNLVGGEKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLVN 775

Query: 1260 QVDRKLVKQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGE 1081
            QVDRKLVKQTVMTSVYGVTY+GARDQI RRLKERG I D++ LF+AACYAA+TTLTALGE
Sbjct: 776  QVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGNIADDSALFAAACYAARTTLTALGE 835

Query: 1080 MFEAARSIMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRE 901
            MFEAARSIMSWLG+CAKVIA EN PV+WTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRE
Sbjct: 836  MFEAARSIMSWLGECAKVIASENHPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRE 895

Query: 900  TDKVMAKRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKI 721
            TDKVM KRQRTAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTHACDVD+MN+I
Sbjct: 896  TDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRI 955

Query: 720  LRQKFVELYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            LR+KFVELYEAPILENLL++FQ+S         P+RGDFDLR+VLESPYFFN
Sbjct: 956  LREKFVELYEAPILENLLESFQESFPNLTFPPLPDRGDFDLRDVLESPYFFN 1007


>ref|XP_009355625.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Pyrus x
            bretschneideri]
          Length = 1007

 Score = 1386 bits (3588), Expect = 0.0
 Identities = 702/1013 (69%), Positives = 808/1013 (79%), Gaps = 28/1013 (2%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHF-FSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVG 3343
            MWR   K+ + R    +S+ H  F+ S + K F Q+ +F  KTR++ + + +N++   +G
Sbjct: 1    MWRNFAKKVASRKANPSSQFHLGFATSSSVK-FSQESSFIEKTRHFDARNCVNNRLLVMG 59

Query: 3342 FHQ-SSVLKQKNKEGYRQFGSLSNPCGFGVSGGLRCYXXXXXXXXXXXXXEDVDE----- 3181
            F Q      QK++ G     SL NP  F    G   Y              D DE     
Sbjct: 60   FRQIGDTASQKDELGRC---SLLNPSYFHGVSGFYGYARGYASAAEAIASTDGDEESSGS 116

Query: 3180 --IQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIETEAWEQAAKEY 3007
              IQEL+E++ R+N  +E  +                Y++LRKRQ+K+ETEAWE+AA EY
Sbjct: 117  EEIQELLEDLIRENNKVESHFKQPKKVVAGIGVGK--YNLLRKRQIKLETEAWEEAANEY 174

Query: 3006 EELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAE 2827
            +ELL DMCEQKLAPNLPYIKSLFLGWFEPL++AI  +Q+ C+   NR ++A Y D LPA+
Sbjct: 175  QELLVDMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPNNRVSHAPYIDHLPAD 234

Query: 2826 MMAVITXXXXXXXXXXXXXXG-SARVVQAACHIGEAIEHEVRIHRFLEKTKRK-NAMNKN 2653
             MAVIT                S RVVQAAC IGEAIE+EVRIHRFLEKTK+K N  +K 
Sbjct: 235  KMAVITMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLEKTKKKKNPTDKK 294

Query: 2652 PEEETEPV---------------AKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWG 2518
            PE+E++PV                K Q +LRKKVN L+KKQK+  VR+IVK  +  KPWG
Sbjct: 295  PEDESDPVIIEQEQLMISEQEKLTKEQQRLRKKVNKLIKKQKMKQVREIVKEQEDLKPWG 354

Query: 2517 QDAQVKVGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTV--ETQRGSRRYGVI 2344
            Q+A VKVGCRLIQ++M+TAYIQPPVDQ  D P +IRPAFVH LKT+  +TQ+ SRRYGVI
Sbjct: 355  QEAHVKVGCRLIQLLMDTAYIQPPVDQSGDDPLDIRPAFVHVLKTITKDTQKTSRRYGVI 414

Query: 2343 ECDPLVRKGLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALR 2164
            ECDPLVRKG+E++A+HMVIPYMPMLVPP+NWTG+DRGAYLFLPSY+MRTHGAKQQR+ ++
Sbjct: 415  ECDPLVRKGMEKSARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQRQVVK 474

Query: 2163 RCPKQQLEPVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTE 1984
            R P+ QLEPVF+AL+TLGSTKWRVNKRVLGVIDRIWASGGRLADLVDR+D+PLPEEPDTE
Sbjct: 475  RTPRTQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTE 534

Query: 1983 DEKEIRKWKRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPM 1804
            DE EI+KWK KV   KKENSERHSQRCDIELKLAV RKMKDEEGF+YPHNLDFRGRAYPM
Sbjct: 535  DETEIKKWKWKVKAAKKENSERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFRGRAYPM 594

Query: 1803 HPHLNHLGSDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHL 1624
            HP+LNHLGSD+CRGILEFAEGRPLGKSGL WLKIHLAN+Y GGVDKLS + R AF ENH+
Sbjct: 595  HPYLNHLGSDMCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSFDERVAFTENHV 654

Query: 1623 EDIFDSADRPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGL 1444
            ++IFDSA RPLEG+RWWL AEDPFQCLA C+NL EALRSPSPETT+S++P+HQDGSCNGL
Sbjct: 655  DEIFDSAVRPLEGKRWWLGAEDPFQCLAACINLYEALRSPSPETTISYMPVHQDGSCNGL 714

Query: 1443 QHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLI 1264
            QHYAALGRDKLGAAAVNLV GEKPADVYSGIAARVLDIMR DA +DPA++PN L ARLLI
Sbjct: 715  QHYAALGRDKLGAAAVNLVGGEKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLI 774

Query: 1263 NQVDRKLVKQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALG 1084
            NQVDRKLVKQTVMTSVYGVTY+GARDQI RRLKER  I D++ LF+AACYAA+TTLTALG
Sbjct: 775  NQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERNNIADDSALFNAACYAARTTLTALG 834

Query: 1083 EMFEAARSIMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQR 904
            EMFEAARSIMSWLG+CAKVIA EN PVQWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQR
Sbjct: 835  EMFEAARSIMSWLGECAKVIASENHPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQR 894

Query: 903  ETDKVMAKRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNK 724
            ETDKVM KRQRTAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTHACDVD+MN 
Sbjct: 895  ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNG 954

Query: 723  ILRQKFVELYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            ILR+KFVELY APILENLL+ FQ+S         P+RGDFDLR+VLESPYFFN
Sbjct: 955  ILREKFVELYNAPILENLLEGFQESFPNMTFPPLPDRGDFDLRDVLESPYFFN 1007


>ref|XP_008339743.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Malus
            domestica]
          Length = 1007

 Score = 1383 bits (3580), Expect = 0.0
 Identities = 698/1012 (68%), Positives = 806/1012 (79%), Gaps = 27/1012 (2%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWR   K+ + R    +S+ H  S + +   F Q+ +F  KTR++ + + +NS+   +GF
Sbjct: 1    MWRNFAKKVASRKANPSSQFHLGSATSSSVKFSQESSFIKKTRHFEARNCVNSRLLVMGF 60

Query: 3339 HQ-SSVLKQKNKEGYRQFGSLSNPCGFGVSGGLRCYXXXXXXXXXXXXXEDVDE------ 3181
             +      QK++ G     SL NP  F    G   Y              D DE      
Sbjct: 61   RKIGDTASQKDELGRC---SLLNPSYFHGVSGFCSYARGYASAAEAIASTDGDEESSGSE 117

Query: 3180 -IQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIETEAWEQAAKEYE 3004
             IQEL+E++ R+N  +E  +                Y+ LRKRQ+K+ETEAWE+AA EY+
Sbjct: 118  EIQELLEDLIRENNKVESHFKQPKKVVAGIGVGK--YNXLRKRQIKLETEAWEEAANEYQ 175

Query: 3003 ELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAEM 2824
            ELL DMCEQKLAPNLPYIKSLFLGWFEPL++AI  +Q+ C+   NR ++A Y D LPA+ 
Sbjct: 176  ELLVDMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPHNRVSHAPYIDLLPADK 235

Query: 2823 MAVITXXXXXXXXXXXXXXG-SARVVQAACHIGEAIEHEVRIHRFLEKTKRK-NAMNKNP 2650
            MAVIT                S RVVQAAC IGEAIE+EVRIHRFL+KTK+K N  +K P
Sbjct: 236  MAVITMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLDKTKKKKNPTDKKP 295

Query: 2649 EEETEPV---------------AKAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQ 2515
            E+E++PV                K Q++LRKKVN L+KKQK+  VR+IVK  +  KPWGQ
Sbjct: 296  EDESDPVIIEQEQLSISEQEKLTKEQERLRKKVNKLIKKQKMKQVREIVKEQEDLKPWGQ 355

Query: 2514 DAQVKVGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTV--ETQRGSRRYGVIE 2341
            +A VKVGCRLIQ++M+TAYIQPPVDQ  D P +IRPAFVH LKT+  +TQ+ SRRYGVIE
Sbjct: 356  EAHVKVGCRLIQLLMDTAYIQPPVDQSGDDPLDIRPAFVHVLKTITKDTQKTSRRYGVIE 415

Query: 2340 CDPLVRKGLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRR 2161
            CDPLVRKG+E++A+HMVIPYMPMLVPP+NWTG+DRGAYLFLPSY+MRTHGAKQQR+ ++R
Sbjct: 416  CDPLVRKGMEKSARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQRQVVKR 475

Query: 2160 CPKQQLEPVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTED 1981
             P+ QLEPVF+AL+TLGSTKWRVNKRVLGVIDRIWASGGRLADLVDR+D+PLPEEPDTED
Sbjct: 476  TPRXQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTED 535

Query: 1980 EKEIRKWKRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMH 1801
            E EI+KWK KV   KKENSERHSQRCDIELKLAV RKMKDEEGF+YPHNLDFRGRAYPMH
Sbjct: 536  ETEIKKWKWKVKAAKKENSERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFRGRAYPMH 595

Query: 1800 PHLNHLGSDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLE 1621
            P+LNHLGSD+CRGILEFAEGR LGKSGL WLKIHLAN+Y GGVDKLS + R AF ENH++
Sbjct: 596  PYLNHLGSDMCRGILEFAEGRRLGKSGLQWLKIHLANLYAGGVDKLSFDERVAFTENHVD 655

Query: 1620 DIFDSADRPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQ 1441
            +IFDSA RPLEGRRWWL AEDPFQCLA C+NL EALRSPSPETT+S++P+HQDGSCNGLQ
Sbjct: 656  EIFDSAVRPLEGRRWWLGAEDPFQCLAACINLYEALRSPSPETTISYMPVHQDGSCNGLQ 715

Query: 1440 HYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLIN 1261
            HYAALGRDKLGAAAVNLV GEKPADVYSGIA RVLDIMR DA +DPA++PN L ARLLIN
Sbjct: 716  HYAALGRDKLGAAAVNLVGGEKPADVYSGIAXRVLDIMRSDAEKDPATNPNALHARLLIN 775

Query: 1260 QVDRKLVKQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGE 1081
            QVDRKLVKQTVMTSVYGVTY+GARDQI RRLKER  I D++ LF+AACYAA+TTLTALGE
Sbjct: 776  QVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERNNIADDSALFAAACYAARTTLTALGE 835

Query: 1080 MFEAARSIMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRE 901
            MFEAARSIMSWLG+CAKVIA EN PVQWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRE
Sbjct: 836  MFEAARSIMSWLGECAKVIASENHPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRE 895

Query: 900  TDKVMAKRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKI 721
            TDKVM KRQRTAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTHACDVD+MN+I
Sbjct: 896  TDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRI 955

Query: 720  LRQKFVELYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            LR+KFVELY+APILENLL+ FQ+S         P+RGDFDLR+VLESPYFFN
Sbjct: 956  LREKFVELYDAPILENLLEGFQESFPNMTFPPLPDRGDFDLRDVLESPYFFN 1007


>ref|XP_009356470.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Pyrus x
            bretschneideri]
          Length = 1007

 Score = 1379 bits (3568), Expect = 0.0
 Identities = 689/1012 (68%), Positives = 808/1012 (79%), Gaps = 27/1012 (2%)
 Frame = -3

Query: 3519 MWRYITKQASLRNFKFTSETHFFSPSFAYKIFLQDYNFNGKTRNYSSGSGLNSQYQEVGF 3340
            MWR   K+ + R    +S+ H  S + +   F Q+ +F  KTR++ + +  N+ +  +GF
Sbjct: 1    MWRNFAKKVASRKANLSSQFHLGSATSSSVKFYQESSFLEKTRHFEARNCANNGFLVMGF 60

Query: 3339 HQ-SSVLKQKNKEGYRQFGSLSNPCGFGVSGGLRCYXXXXXXXXXXXXXED-------VD 3184
             Q      QK++ G     SL NP       G   Y              D        +
Sbjct: 61   RQIGDKASQKDELGRC---SLMNPSYSHAVSGFCSYARGYASAAEAIASTDGEEDSSGSE 117

Query: 3183 EIQELIEEMERQNKAMEVSYXXXXXXXXXXXXXXXKYHILRKRQVKIETEAWEQAAKEYE 3004
            EI+EL++++ R+N  +E  +                Y++LRKRQ+K+ETEAWE+AA EY+
Sbjct: 118  EIEELLDDLIRENNKVESHFKQTKKVVGGMGVGK--YNLLRKRQIKLETEAWEEAANEYQ 175

Query: 3003 ELLEDMCEQKLAPNLPYIKSLFLGWFEPLKDAIVAEQDLCKDGKNRGAYAQYFDQLPAEM 2824
            ELL DMCEQKLAPNLPYIKSLFLGWFEPL++AI  +Q+ C+   +R ++A YFD LPA+ 
Sbjct: 176  ELLVDMCEQKLAPNLPYIKSLFLGWFEPLRNAIAEDQEACRQPNSRVSHAPYFDHLPADK 235

Query: 2823 MAVITXXXXXXXXXXXXXXG-SARVVQAACHIGEAIEHEVRIHRFLEKTKRK-NAMNKNP 2650
            MAVIT                S RVVQAAC IGEAIE+EVRIHRFLEKTK+K N  +K P
Sbjct: 236  MAVITMHKLMGLLMTNNGGVGSVRVVQAACAIGEAIENEVRIHRFLEKTKKKKNLTDKKP 295

Query: 2649 EEETEPVA---------------KAQDKLRKKVNVLMKKQKLHHVRKIVKHHDGSKPWGQ 2515
            E+E++PVA               K +++LRKKVN L+KKQK+  VR+IVK  +  KPWGQ
Sbjct: 296  EDESDPVAIEQEKLTISEQEELTKEKERLRKKVNKLIKKQKMKQVREIVKEQEDLKPWGQ 355

Query: 2514 DAQVKVGCRLIQIMMETAYIQPPVDQFEDGPPEIRPAFVHTLKTV--ETQRGSRRYGVIE 2341
            +A VKVGCRLIQ++M+TAYIQPPVDQ  DG  +IRPAFVH LKT+  +TQ+ SRRYGVI+
Sbjct: 356  EAHVKVGCRLIQLLMDTAYIQPPVDQSGDGSLDIRPAFVHVLKTITKDTQKTSRRYGVIQ 415

Query: 2340 CDPLVRKGLERTAKHMVIPYMPMLVPPLNWTGHDRGAYLFLPSYIMRTHGAKQQREALRR 2161
            CDPLVRKG+E+TA+HMVIPYMPMLVPP+NWTG+DRGAYLFLPSY+MRTHGAKQQR+ ++R
Sbjct: 416  CDPLVRKGMEKTARHMVIPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQRQVVKR 475

Query: 2160 CPKQQLEPVFQALNTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRDDIPLPEEPDTED 1981
             P+ QLEPVF+AL+TLGSTKWRVNKRVLGVIDRIWA+GG LADLVDR+D+PLPEEPDTED
Sbjct: 476  TPRTQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWANGGHLADLVDREDVPLPEEPDTED 535

Query: 1980 EKEIRKWKRKVNTVKKENSERHSQRCDIELKLAVGRKMKDEEGFFYPHNLDFRGRAYPMH 1801
            E EI+KWK KV   KKEN ERHSQRCDIELKLAV RKMKDEEGF+YPHNLDFRGRAYPMH
Sbjct: 536  ETEIKKWKWKVKDAKKENCERHSQRCDIELKLAVSRKMKDEEGFYYPHNLDFRGRAYPMH 595

Query: 1800 PHLNHLGSDLCRGILEFAEGRPLGKSGLNWLKIHLANVYGGGVDKLSHEGRAAFAENHLE 1621
            P+LNHLGSD+CR ILEF+EGR LGK GL WLKIHLAN+Y G VDKLS +GR AF ENH++
Sbjct: 596  PYLNHLGSDMCRSILEFSEGRRLGKLGLRWLKIHLANLYAGAVDKLSFDGRVAFTENHVD 655

Query: 1620 DIFDSADRPLEGRRWWLNAEDPFQCLATCMNLSEALRSPSPETTMSHLPIHQDGSCNGLQ 1441
            +IFDSADRPLEGRRWWL AEDPFQCLA C+NL+EALRSPSPETT+S++P+HQDGSCNGLQ
Sbjct: 656  EIFDSADRPLEGRRWWLGAEDPFQCLAACINLAEALRSPSPETTVSYMPVHQDGSCNGLQ 715

Query: 1440 HYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAARDPASDPNVLRARLLIN 1261
            HYAALGRD+LGAAAVNLV GEKPADVYSGIAARVLDIMR DA +DPA++PN L ARLL+N
Sbjct: 716  HYAALGRDRLGAAAVNLVGGEKPADVYSGIAARVLDIMRSDAEKDPATNPNALHARLLVN 775

Query: 1260 QVDRKLVKQTVMTSVYGVTYIGARDQIARRLKERGTIQDEAELFSAACYAAKTTLTALGE 1081
            QVDRKLVKQTVMTSVYGVTY+GARDQI RRLKERG I D++ LF+AACYAA+TTLTALGE
Sbjct: 776  QVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGNISDDSALFAAACYAARTTLTALGE 835

Query: 1080 MFEAARSIMSWLGDCAKVIAMENQPVQWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRE 901
            MFEAARSIMSWLG+CAKVIA EN PVQWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRE
Sbjct: 836  MFEAARSIMSWLGECAKVIASENHPVQWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRE 895

Query: 900  TDKVMAKRQRTAFPPNFVHSLDGSHMMMTAIACREAGLNFAGVHDSYWTHACDVDQMNKI 721
            TDKVM KRQRTAFPPNFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTHACDVD+MN+I
Sbjct: 896  TDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRI 955

Query: 720  LRQKFVELYEAPILENLLDNFQKSXXXXXXXXXPERGDFDLREVLESPYFFN 565
            LR+KFVELY+APILENLL++FQ+S         P+RGDFDLR+VLESPYFF+
Sbjct: 956  LREKFVELYKAPILENLLESFQESFPNLTFPPLPDRGDFDLRDVLESPYFFH 1007