BLASTX nr result

ID: Gardenia21_contig00010687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00010687
         (950 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP03467.1| unnamed protein product [Coffea canephora]            122   5e-25
ref|XP_013638264.1| PREDICTED: uncharacterized protein LOC106343...    60   3e-06
ref|XP_006355775.1| PREDICTED: uncharacterized protein LOC102603...    58   1e-05

>emb|CDP03467.1| unnamed protein product [Coffea canephora]
          Length = 98

 Score =  122 bits (305), Expect(2) = 5e-25
 Identities = 60/77 (77%), Positives = 66/77 (85%)
 Frame = -3

Query: 735 KRKKMIRQRLVWFASGFAATSATIGVLVYRDLQAHRNAQYSQANEEYNAVITRVTNLERF 556
           +RKKMIRQRL WFA GF A SATIGV VY+DLQAHRNA +SQANEEYN + TRVTNLER 
Sbjct: 22  QRKKMIRQRLGWFAFGFTAASATIGVFVYKDLQAHRNAHFSQANEEYNVLNTRVTNLERV 81

Query: 555 FLNSPNSNVQSGGSDLQ 505
            LN+P SNVQSGGSDL+
Sbjct: 82  CLNNPKSNVQSGGSDLK 98



 Score = 21.2 bits (43), Expect(2) = 5e-25
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 809 NHRALSPILPSPSLAKE 759
           NHRAL+P  P P   K+
Sbjct: 9   NHRALNPNSPLPLQRKK 25


>ref|XP_013638264.1| PREDICTED: uncharacterized protein LOC106343561 [Brassica oleracea
           var. oleracea] gi|923827963|ref|XP_013696526.1|
           PREDICTED: uncharacterized protein LOC106400703
           [Brassica napus] gi|923832768|ref|XP_013698155.1|
           PREDICTED: uncharacterized protein LOC106402058
           [Brassica napus]
          Length = 86

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 31/69 (44%), Positives = 45/69 (65%)
 Frame = -3

Query: 768 RQREKHHTTKGKRKKMIRQRLVWFASGFAATSATIGVLVYRDLQAHRNAQYSQANEEYNA 589
           R+R K    +G++KKM+R RL+WF  GF+ T A++  LV+RDL A R A  S   E++ A
Sbjct: 7   RRRSKE---EGRKKKMLRTRLLWFTLGFSVTGASVAHLVWRDLYAERFAISSDMKEKFGA 63

Query: 588 VITRVTNLE 562
           + +RV  LE
Sbjct: 64  LESRVAGLE 72


>ref|XP_006355775.1| PREDICTED: uncharacterized protein LOC102603203 [Solanum tuberosum]
          Length = 69

 Score = 58.2 bits (139), Expect = 1e-05
 Identities = 28/68 (41%), Positives = 42/68 (61%)
 Frame = -3

Query: 723 MIRQRLVWFASGFAATSATIGVLVYRDLQAHRNAQYSQANEEYNAVITRVTNLERFFLNS 544
           M+R RLVWF  GF + SA +   ++RDL AH+ +  SQ  E++  + TRV+NLE    ++
Sbjct: 1   MMRIRLVWFTLGFTSASAAMSQFIFRDLWAHQLSLSSQLEEKFGVLGTRVSNLELALHDT 60

Query: 543 PNSNVQSG 520
           PN+    G
Sbjct: 61  PNTQQDEG 68


Top