BLASTX nr result
ID: Gardenia21_contig00010618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00010618
(2862 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP18669.1| unnamed protein product [Coffea canephora] 1482 0.0
ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 630 e-177
ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 624 e-175
ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V sub... 568 e-158
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 567 e-158
ref|XP_011020393.1| PREDICTED: DNA-directed RNA polymerase V sub... 559 e-156
ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V sub... 535 e-149
ref|XP_008348940.1| PREDICTED: DNA-directed RNA polymerase V sub... 527 e-146
ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V sub... 523 e-145
gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas] 523 e-145
ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V sub... 521 e-144
ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V sub... 503 e-139
gb|KRH13386.1| hypothetical protein GLYMA_15G235900 [Glycine max... 499 e-138
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 499 e-138
ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V sub... 498 e-137
gb|KHG00588.1| DNA-directed RNA polymerase E subunit 1 -like pro... 496 e-137
ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps... 492 e-136
gb|KRH20723.1| hypothetical protein GLYMA_13G196900 [Glycine max] 491 e-135
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 490 e-135
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi... 486 e-134
>emb|CDP18669.1| unnamed protein product [Coffea canephora]
Length = 1946
Score = 1482 bits (3836), Expect = 0.0
Identities = 734/866 (84%), Positives = 762/866 (87%), Gaps = 2/866 (0%)
Frame = -2
Query: 2861 DAVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMM 2682
DAVK TGDAWR+VMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVM+
Sbjct: 1081 DAVKQTGDAWRVVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVML 1140
Query: 2681 VTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAA 2502
VTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAA
Sbjct: 1141 VTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAA 1200
Query: 2501 EKCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSS 2322
EKCHV+SLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQ AGI+VYDFLQLVRGSS
Sbjct: 1201 EKCHVDSLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQPAGIDVYDFLQLVRGSSG 1260
Query: 2321 GDETNTACLGAEIENLDMEDEAMTFDLSPVRDSDQPTFEDRHEFENNLANPRSKESIQRE 2142
GDETNT CLGAEIENLD+EDEAMTFDLSPVRDSDQPTFEDRHE ENNLANPRSKESIQRE
Sbjct: 1261 GDETNTTCLGAEIENLDLEDEAMTFDLSPVRDSDQPTFEDRHELENNLANPRSKESIQRE 1320
Query: 2141 LSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSKMAKEDSL 1962
L WERDSPQTAEL GGWE V KEDNFS MAKEDS
Sbjct: 1321 LGWERDSPQTAELGGGWEKASKAQNTSANVLVSDSAWASWGGGTVGKEDNFSTMAKEDSR 1380
Query: 1961 SFGEWNSKQPDSLKQSGSSSAWGKMVDNESDSSFAAEPRRSWEQSADKSGNVWTAKNVXX 1782
SF +WNS QP SLKQSGSSS WGKMVDNE DSSFAAEPR SWEQ+ADKSGNVWT K V
Sbjct: 1381 SFTDWNSTQPGSLKQSGSSSVWGKMVDNERDSSFAAEPRSSWEQAADKSGNVWTGKKVSD 1440
Query: 1781 XXXXXXXXSPVDKEASFSNRVQ--SPKYGEWGAKEPQSTGEQSESSPAWKKIDSLGNLPL 1608
SPVDKEA FSN VQ SPKYGEWGAKE +STG+QSESSPAWKKIDSLGNLPL
Sbjct: 1441 SAWSSWGSSPVDKEARFSNGVQKNSPKYGEWGAKELRSTGKQSESSPAWKKIDSLGNLPL 1500
Query: 1607 TAKASGGWDQKFDKDQKHAAQTTSLNSAWSSWNNCEPVKIDSFSKRVQEKSSCDGEWGEK 1428
TAKASGGWDQKFDKDQ+HAAQTT+L+ WSSWNNCEPV+ DSFSKRVQE+SS DGEWG+K
Sbjct: 1501 TAKASGGWDQKFDKDQRHAAQTTALDPGWSSWNNCEPVERDSFSKRVQERSSSDGEWGKK 1560
Query: 1427 SQDTAKQSGSSFAWEKKFEAGSASPLXXXXXXXXXXXGWELAIDKAQRLVCQATIMDSSW 1248
SQDTAKQSGSSF W KKFEAGS SPL GWELA+DKAQRLV QAT+ D +W
Sbjct: 1561 SQDTAKQSGSSFGWGKKFEAGSNSPLTTNGSASCGSGGWELALDKAQRLVSQATVSDPTW 1620
Query: 1247 SSWGRGETNKEERLSNSGQEDASNDHKWGAKESQSMGKQSGFSSGWGRKVSSNENKADEN 1068
SSWG GETNKEE + NSGQ D SNDHKWGAKES+S GKQ GFSSGWG KVSSNENK DEN
Sbjct: 1621 SSWGSGETNKEEIILNSGQGDTSNDHKWGAKESESTGKQLGFSSGWGTKVSSNENKTDEN 1680
Query: 1067 KDPARVATGNYSDWSKMNTDLVQGERSLATNAEEGSWRSGGAIGINIDGERSKSAGTRAW 888
KDP V T NYSDWSKMNTD VQGERSL TN+EEGSWRSGGA+GI+ DGER+KS GT AW
Sbjct: 1681 KDPVTVTTENYSDWSKMNTDAVQGERSLPTNSEEGSWRSGGAVGIDTDGERNKSTGTHAW 1740
Query: 887 ENKKDAHSQRGPRKWFKGDGNESSRGWGSPSNGDWRNQRNRPAKAVDNFSAGGTFTLTKQ 708
ENKKDAHSQRGPRKWFKG+GNESSRGWGSPSNGDWRNQRNRPAKAVDN A GTFTLTKQ
Sbjct: 1741 ENKKDAHSQRGPRKWFKGNGNESSRGWGSPSNGDWRNQRNRPAKAVDNVGASGTFTLTKQ 1800
Query: 707 RLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKELK 528
RLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEK LK
Sbjct: 1801 RLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKVLK 1860
Query: 527 IGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKHPDKADAFLAKYF 348
IGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFAR K+PDKADAFLAKYF
Sbjct: 1861 IGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARKKYPDKADAFLAKYF 1920
Query: 347 SRKPSRPGWSRDHASTPDDAGSQQEQ 270
SRKP RPGWSRDHASTPD+AGS+QEQ
Sbjct: 1921 SRKPPRPGWSRDHASTPDEAGSRQEQ 1946
>ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1 [Nicotiana tomentosiformis]
Length = 1983
Score = 630 bits (1626), Expect = e-177
Identities = 395/932 (42%), Positives = 513/932 (55%), Gaps = 77/932 (8%)
Frame = -2
Query: 2861 DAVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMM 2682
+AVK GDAWRI+MD+CLP LIDT RSIPYAIKQVQEL+GISCAFEQAV+RLSTSV M
Sbjct: 1083 EAVKQRGDAWRILMDSCLPFIHLIDTRRSIPYAIKQVQELIGISCAFEQAVKRLSTSVTM 1142
Query: 2681 VTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAA 2502
VTKGVLKDHLVLLANSMTCAGNLIGFN GGIKALSR+L+VQ+PFTEATL PRKCFERAA
Sbjct: 1143 VTKGVLKDHLVLLANSMTCAGNLIGFNAGGIKALSRALNVQIPFTEATLFTPRKCFERAA 1202
Query: 2501 EKCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSS 2322
EKCHV+SLSS+V SCSWGKHVAVGTGSPF++L +TK VELN +VY FL LVR SS+
Sbjct: 1203 EKCHVDSLSSIVASCSWGKHVAVGTGSPFEVLWNTKNVELNIPDAHDVYSFLHLVRSSSA 1262
Query: 2321 GDETNTACLGAEIENLDMEDEAMTFDLSPVRD--SDQPTFEDRHEFENNLANPRSKESIQ 2148
+ T+CLGAE+E L++EDE M LSP RD SD+PTFEDR EF+N + N E
Sbjct: 1263 QEVEGTSCLGAEVEELEVEDEDMGLYLSPDRDSGSDKPTFEDRAEFDNGIENENLDEGKL 1322
Query: 2147 RELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSKMA--K 1974
+WE+ S + + G W+ VD+ +N + +
Sbjct: 1323 SGSAWEKASSENVKSGGSWD--MAKTQNGAEKAVNQSDSWSSWGRKVDEAENNPRQSGNG 1380
Query: 1973 EDSLSFGEW---------NSKQPDSLKQSGSSSAWGKMVD------NESDSSFAAEPRRS 1839
E S+ W N +Q + QSGS SAWGK VD +S + + S
Sbjct: 1381 EQLESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGSLSS 1440
Query: 1838 WEQSADKSGNVWTAKNVXXXXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKEPQSTGEQS 1659
W + +K G W K V +K S S+ WG K +
Sbjct: 1441 WGKKVEKDGGSW-GKRVEETENHNHQSGKDEKSGSLSS---------WGKK------VEK 1484
Query: 1658 ESSPAWKKIDSLGNLPLTAKA--SGG--WDQKFDKDQKHAAQT--TSLNSAWSSW-NNCE 1500
+ +W K++ G K GG W +K ++ + H+ Q+ + + SSW E
Sbjct: 1485 DGDSSWGKVEIDGGSSWGKKVEIDGGSSWGKKVEEAENHSHQSGKEEKSESLSSWGKKVE 1544
Query: 1499 PVKIDSFSKRVQEKSSCDGEWGEK-------SQDTAKQ--SGSSFAWEKKFEAGSASPLX 1347
+ S+ K+V++ G WG+K SQ + K+ S S +W K+ E S
Sbjct: 1545 KDGVSSWGKKVEKDG---GSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGS--- 1598
Query: 1346 XXXXXXXXXXGWELAIDK------AQRLVCQATIMDS-------SWSSWGRGETNKEERL 1206
W ++K +++ + T S SWSSWG+ + ++
Sbjct: 1599 SWGKQVEKGGSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQSGSWSSWGK-QVKEDGGA 1657
Query: 1205 SNSGQEDASNDHKWGAK--------ESQSMGKQSGFSSGWGRKVSSNENKADENKDPARV 1050
S + + WG K G+Q G S WG+KV + D K
Sbjct: 1658 SWGEKVEKDGGSSWGKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQ---- 1713
Query: 1049 ATGNYSDWSKMNTDLVQGERSLATNAEEGSWRSGGAIGINIDGERSKSAGTR-------- 894
+ + S W K G + N +G + NI G+ + TR
Sbjct: 1714 -SNSESSWGKTTKGGGFGSAAAEGNRRVDQLVNGWS--SNISGDEQLNEPTRDDYKSWWL 1770
Query: 893 ------------AWENKKDAHSQRGPRKW-FKGDGNESSRGWGSPSNGDWRNQRNRPAKA 753
W + D Q G R+ +GD ++SRGWGS S G+W+ NRPA++
Sbjct: 1771 EFFNSWWLEFSEGWCXESDKQPQWGQRRRNTRGDFRDNSRGWGSSSGGEWKG--NRPARS 1828
Query: 752 VDNFSAGGTFTLTKQRLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSY 573
D+ + GG FT T+QR+D FTAEEQDILS+ + +M NIRRI+HQTGYNDGDPLSADDQSY
Sbjct: 1829 ADDSNRGGNFTATRQRMDIFTAEEQDILSNVDPIMLNIRRIMHQTGYNDGDPLSADDQSY 1888
Query: 572 VVDNVLNYHPEKELKIGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFAR 393
++D VLNYHP+K +K+GAG+ YI VSKH FQ+SRCFYVVSTD KQDFS RK LENF R
Sbjct: 1889 IIDTVLNYHPDKAVKMGAGLDYITVSKHTEFQDSRCFYVVSTDGAKQDFSTRKCLENFIR 1948
Query: 392 VKHPDKADAFLAKYFSRKPSRPGWSRDHASTP 297
K+PDKA+ F KYF K +P +R+ + +P
Sbjct: 1949 SKYPDKAETFNGKYF--KKPQPRSTRNASPSP 1978
>ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1 [Nicotiana sylvestris]
Length = 2055
Score = 624 bits (1610), Expect = e-175
Identities = 401/988 (40%), Positives = 528/988 (53%), Gaps = 133/988 (13%)
Frame = -2
Query: 2861 DAVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMM 2682
+AVK GDAWRI+MD+CLP LIDT RSIPYAIKQVQEL+GISCAFEQAV+RLSTSV M
Sbjct: 1083 EAVKQRGDAWRILMDSCLPFIHLIDTRRSIPYAIKQVQELIGISCAFEQAVKRLSTSVTM 1142
Query: 2681 VTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAA 2502
VTKGVLKDHLVLLANSMTCAGNLIGFN GGIKALSRSL++Q+PFTEATL PRKCFERAA
Sbjct: 1143 VTKGVLKDHLVLLANSMTCAGNLIGFNAGGIKALSRSLNMQIPFTEATLFTPRKCFERAA 1202
Query: 2501 EKCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSS 2322
EKCHV+SLSS+V SCSWGKHVAVGTGSPF+++ +TK VELN +VY FL LVR SS+
Sbjct: 1203 EKCHVDSLSSIVASCSWGKHVAVGTGSPFEVIWNTKNVELNIPDAHDVYSFLHLVRSSSA 1262
Query: 2321 GDETNTACLGAEIENLDMEDEAMTFDLSPVRD--SDQPTFEDRHEFENNLANPRSKESIQ 2148
+ T+CLGAE+E L++EDE M LSP RD SD+PTFEDR EF+N + N E
Sbjct: 1263 QEVEGTSCLGAEVEELEVEDEDMGLYLSPDRDSGSDKPTFEDRAEFDNGIENENLDEGKL 1322
Query: 2147 RELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSKMAKED 1968
+WE+ S + + G W+ D E+N + +
Sbjct: 1323 SGSAWEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVD-DAENNPRQSGNGE 1381
Query: 1967 SL-SFGEW---------NSKQPDSLKQSGSSSAWGKMVDNESDSSFAAEPR----RSWEQ 1830
L S+ W N +Q + QSGS SAWGK VD +S E + SW +
Sbjct: 1382 QLESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSQSGNEEQSGSLSSWGK 1441
Query: 1829 SA------------------------DKSGNV--WTAKNVXXXXXXXXXXSPVDKEASFS 1728
+KSG++ W K +D +S+
Sbjct: 1442 KVEKDTGSWGKKVEEMESHNPQSGKDEKSGSLSSWGKKVEKDGDSSWGKKVEIDGGSSWG 1501
Query: 1727 NRVQSPKYGEWGAKEPQSTG--------EQSESSPAW-------------KKIDSLGNL- 1614
+V+ WG K ++ E+SES +W KK+++ G
Sbjct: 1502 KKVEIDGGSSWGKKVEEAENYSHQSGKEEKSESLSSWGKKVEKDGVSSWGKKVENDGVSS 1561
Query: 1613 --PLTAKASGGWDQKFDKDQKHAAQT-----TSLNSAW---------SSW-NNCEPVKID 1485
K G W +K ++ + H+ Q+ + S+W SSW E +
Sbjct: 1562 WGKKVEKDGGSWGKKVEQAENHSHQSWKEEKSESLSSWGKKVEKDGVSSWGKKVENDGVS 1621
Query: 1484 SFSKRVQEKSSCDGEWGEKSQDTAKQSGSSF---------AWEKKFEAGSASPLXXXXXX 1332
S+ K+V++ G WG+K + S S+ +W KK E S
Sbjct: 1622 SWGKKVEKDG---GSWGKKVEQAENHSHQSWKEEKSESLSSWGKKVEKDGVSS-WGKKGE 1677
Query: 1331 XXXXXGWELAIDK------AQRLVCQATIMDS-------SWSSWGRGETNKEERLSNSGQ 1191
W ++K +++ + T S SWSSWG+ KE+ ++SG+
Sbjct: 1678 NDGVSSWGKKVEKDGGSSWGEKVESENTPRPSGKGEQSGSWSSWGK--QVKEDGGASSGK 1735
Query: 1190 E-DASNDHKWGAK--------ESQSMGKQSGFSSGWGRKVSSNENKADENKDPARVATGN 1038
+ + WG K G+QSG S WG+KV + D K + +
Sbjct: 1736 KVEKDGGSSWGKKVDEPEDKPHQSGNGEQSGSWSSWGKKVEKDGGSLDGPKQ-----SNS 1790
Query: 1037 YSDWSKMNTDLVQGERSLATNAEEGSWRSGGAIGINIDGERSK----------------- 909
S W K G + N +GG+ I+ D + ++
Sbjct: 1791 ESSWGKTTKGGGFGSAAAEGNRRVDQLVNGGSSSISGDEQLNEPTRDDYKSWWLEFFNSW 1850
Query: 908 ----SAGTRAWENKKDAHSQRGPRKWFKGDGNESSRGWGSPSNGDWRNQRNRPAKAVDNF 741
S G +K+ QR R+ +GD ++SRGWGS S G+W+ NRPA++ D+
Sbjct: 1851 WLEFSEGCIEENDKQPQWGQR--RRNTRGDFRDNSRGWGSSSGGEWKG--NRPARSADDS 1906
Query: 740 SAGGTFTLTKQRLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDN 561
+ GG FT T+QR+D FT EEQDILS+ + +M NIRRI+HQTGYNDGDPLSADDQSY++D
Sbjct: 1907 NRGGNFTATRQRMDIFTEEEQDILSNVDPIMLNIRRIMHQTGYNDGDPLSADDQSYIIDT 1966
Query: 560 VLNYHPEKELKIGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKHP 381
VLNYHP+K +K+GAG+ YI VSKH FQ+SRCFYVVSTD KQDFS RK LENF R K+P
Sbjct: 1967 VLNYHPDKAVKMGAGLDYITVSKHTEFQDSRCFYVVSTDGAKQDFSTRKCLENFVRSKYP 2026
Query: 380 DKADAFLAKYFSRKPSRPGWSRDHASTP 297
DKA+ F KYF K +P +R+ + +P
Sbjct: 2027 DKAETFNGKYF--KKPQPRNTRNASPSP 2052
>ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum indicum]
Length = 2096
Score = 568 bits (1463), Expect = e-158
Identities = 372/976 (38%), Positives = 510/976 (52%), Gaps = 126/976 (12%)
Frame = -2
Query: 2861 DAVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMM 2682
+AV+ +GDAWR+VMD+CLPV LIDT RSIPYAIKQVQELLGISCAFEQAV+RLSTSV M
Sbjct: 1067 EAVRKSGDAWRVVMDSCLPVIHLIDTRRSIPYAIKQVQELLGISCAFEQAVQRLSTSVTM 1126
Query: 2681 VTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAA 2502
VTKGVLKDHL+LL NSMTCAG LIGFN GGIKALS+SL VQVPF ATL PRKCFERAA
Sbjct: 1127 VTKGVLKDHLLLLGNSMTCAGTLIGFNAGGIKALSKSLSVQVPFMNATLFTPRKCFERAA 1186
Query: 2501 EKCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSS 2322
EKCHV++LSS+VGSC+WGKHV+VGTGSPF+IL DT+K EL+ I+VY+FL LV SS
Sbjct: 1187 EKCHVDNLSSIVGSCAWGKHVSVGTGSPFEILWDTRKAELSPDKEIDVYNFLHLVNSSSK 1246
Query: 2321 GDETNTACLGAEIENLDMEDEAMTFDLSPVRDS--DQPTFEDRHEFENNLANPRSKESIQ 2148
++ T+CLGAEIE+LD ED+ M +D SPVRD D+PTFED E+ N + +
Sbjct: 1247 PEDMATSCLGAEIEDLDQEDDFMEYDPSPVRDPGLDKPTFEDGIEYR---LNGDDNDGLS 1303
Query: 2147 RELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSK----- 1983
+E E G W +E++++K
Sbjct: 1304 KE--------DAKEPEGSWSSWTKKVDFEENDWTKKAGQSTWEKNVNTEENDWTKKPEQS 1355
Query: 1982 -MAKEDSLSFGEWNSK---QPDSLKQSGSSSAWGKMVDNESDSSFAAEPRRSWEQSADKS 1815
K+ + +WN K + + + S WGK V++E + + +W + +
Sbjct: 1356 TWGKKVNSEENDWNKKVNSEENDWNKKPEQSTWGKKVNSEENDWTEKPEQSTWGKKVNSE 1415
Query: 1814 GNVWTAKNVXXXXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKEPQST-GEQSESSPAW- 1641
N WT K +E+++ +V S + +W QS E++++ AW
Sbjct: 1416 ENDWTNK---------------PEESTWGKQVASEE-NDWKKMGEQSAWAEEAQNGSAWG 1459
Query: 1640 KKIDS-----------------LGNLPLTAKAS-------GGW----------DQKFDKD 1563
KK+DS G+ ++S GGW + +D
Sbjct: 1460 KKVDSDVGRGWAKKDEENKWDRSGSSERRGQSSHSRDSNKGGWGKASTPKTNNQSSWGRD 1519
Query: 1562 QKHAAQTTSLNSAWSSWNNC-------------EPVKIDSFSKRVQEKSSCDGEWGEKSQ 1422
A ++ + SW++ EP + D WG K
Sbjct: 1520 TTQAEYVSAESQEDGSWSSASVARRETALDVSSEPAGWNKLGSGTSSLEVLDDPWGAKVA 1579
Query: 1421 DTAKQSGSSFAWEKKFEAGS-ASPLXXXXXXXXXXXGWELAIDKAQRLVCQATI------ 1263
+ A S S AW + G S W +Q+ + +T+
Sbjct: 1580 NQATHSKPSNAWGSSKDVGKFDSEPATEQKKESPSNNW----SSSQKQLNDSTVDKVWGS 1635
Query: 1262 ----------MDSSWSSWGRGETNKEERLSNSGQED---ASNDHKWGAKESQS---MGKQ 1131
M S W G E ++ +S + AS+D WG SQS K+
Sbjct: 1636 PHVNTPSEKDMQSQWGKKGSWEAKVADQAIHSKPSNTWGASDD--WGKLGSQSPTGKKKE 1693
Query: 1130 SGFSS---------------GWG-RKVSSN-----------ENKADENKDPARV-----A 1047
S F++ GWG KV ++ EN D+ D A A
Sbjct: 1694 SPFNNWGSSQEQPNDSVAVQGWGSTKVDTSAEKDVLSQLEKENPWDKVGDQATESKPSNA 1753
Query: 1046 TGNYSDWSKMNTDLVQGERSLATNAEEGSWRSGGAIGINIDGERSKSAGTRAWENKK-DA 870
G+ +DW K ++ G++ + +W S + +++ + W + K D
Sbjct: 1754 WGSSADWGKADSQSPSGQKQ---ESSFNNWSSR-------QKQSNETTVGQGWGSPKVDN 1803
Query: 869 HSQRGPR-KWFKGDG---------NESSRGWGSPSNGDWRNQRNRPAKAVDNFSAGGTFT 720
S++ R +W +G G ESS+G G ++G+W+N++ R AVD+ +A F+
Sbjct: 1804 SSEKDVRPQWGRGKGRGWGRGGRSRESSQGRGFTNDGEWKNKKPR---AVDDPNAPALFS 1860
Query: 719 LTKQRLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPE 540
+T+QRLDSFT EEQD LS+ E +M+NIR+I++QTGYNDGDPLS DDQ+Y++DNV +YHP+
Sbjct: 1861 VTRQRLDSFTVEEQDALSEIEPIMKNIRKIMNQTGYNDGDPLSTDDQTYIIDNVFSYHPD 1920
Query: 539 KELKIGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKHPDKADAFL 360
K LK+GAGI YIMVS+H FQ+SRCFY VS D K DFSYRK LENF + K+PDKA+AF+
Sbjct: 1921 KALKMGAGIDYIMVSRHGEFQDSRCFYAVSVDGSKADFSYRKCLENFIKGKYPDKAEAFI 1980
Query: 359 AKYFSRKPSRPGWSRD 312
KYF + R GW+RD
Sbjct: 1981 TKYFKKSQPRAGWNRD 1996
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 567 bits (1461), Expect = e-158
Identities = 375/923 (40%), Positives = 501/923 (54%), Gaps = 61/923 (6%)
Frame = -2
Query: 2855 VKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMVT 2676
VK +GDAWRIV+D+CLPV LI+T RSIPYAIKQVQELLG+SCAF+ AV+RLS SV MV
Sbjct: 1085 VKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLGVSCAFDTAVQRLSKSVTMVA 1144
Query: 2675 KGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAEK 2496
KGVLK+HL+LL NSMTCAG+LIGF GG K LSRSLD+QVPFTEATL PRKCFE+AAEK
Sbjct: 1145 KGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPFTEATLFTPRKCFEKAAEK 1204
Query: 2495 CHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSSGD 2316
CH +SLSS+V SC+WGKHV VGTGS FD+L DTK+ LN + ++VY FL +VR ++ G+
Sbjct: 1205 CHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPEGSMDVYSFLNMVRSTAGGE 1264
Query: 2315 ETNTACLGAEIENLDMEDEAMTFDLSPVRD--SDQPTFEDRHEFENNLANPRSKESIQRE 2142
E+ TACLGAE+++L +EDE ++LSP + SD+PTFED EF++ L N + E
Sbjct: 1265 ESVTACLGAEVDDLMLEDE--DWNLSPEHNSSSDKPTFEDSAEFQDFLGNQPA------E 1316
Query: 2141 LSWERDS--PQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSKMAKED 1968
+WE+ S + SG W+ VDK D KE
Sbjct: 1317 SNWEKISSLKDRSRSSGNWD--------------------------VDKNDG---AVKEK 1347
Query: 1967 SLSFGEWNSKQPDSLKQSGSSSAWGKMVDNESDSSFAAEPRRSWEQSADKSGNVWTAKNV 1788
S G N+ + + + SG +A + +N +S + QS SG W K
Sbjct: 1348 PWSLG-MNTAEANDVASSGWDTAAARTTNNSWNS------ENNVAQSNSFSG--WATKK- 1397
Query: 1787 XXXXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKEPQST-GEQSESSPAWKKI---DSLG 1620
+ V +E + SN + WG K+ + E + S W K+ D G
Sbjct: 1398 --PEPHNGFATKVQEEPTTSNDWDAG--AAWGRKDRDNKFAETNASKSWWGKVTDGDESG 1453
Query: 1619 NLPLTAK-------ASGGWDQKFDKDQ-------KHAAQTTSLNSAWSSWNNCEPVKIDS 1482
K + GWD K +DQ K + T+ + W S N P
Sbjct: 1454 QNKSKNKRPEDQDVGTHGWDDKMSQDQSISGWASKTTQEATTESLGWDSKGNSNPGDAAC 1513
Query: 1481 FSKRVQ----EKSSCDGEWGEKSQDTAKQSGSSFAWEKKFEAGSASPLXXXXXXXXXXXG 1314
K E + D WG+ + ++ Q+ ++ W K SP
Sbjct: 1514 GWKAASTWGAENTDGDKLWGK--EVSSNQADTASGWGK-----PKSP------------- 1553
Query: 1313 WELAIDKAQRLVCQATIMDSSW--SSWGRGETNKEERLSNSGQEDASNDHKWGAKESQSM 1140
I ++ D W SS G G K E S +GQ S WG K + +
Sbjct: 1554 ---EISLGWGSTKESVKSDRGWGVSSSGGGRDKKTENQSLAGQGKESGG--WGNKVTSN- 1607
Query: 1139 GKQSGFSSGWGRKVSSNENKA-----DENKDPARVATGNYSDWSKMNTDLVQGERSLATN 975
Q+ +SGWG+ SS ++ + K+ N + + T+ +SL
Sbjct: 1608 --QADTASGWGKPKSSENSQGWGLSKESGKEVHEWGVPNSAGGNGSETNNNNENQSLVEQ 1665
Query: 974 AEEGSW-------RSGGAIGINIDGERSKSAGTRAW----ENKKDAHSQRGP-------- 852
+E W + G A G G+ A + W E K H P
Sbjct: 1666 GKESGWDNKASSNQEGTASGW---GKPKSPALSEGWGSPREPVKAVHGWGVPNSGGGNGS 1722
Query: 851 ---RKW------FKGDGNESSRGWGSPSNGDWRNQRNRPAKAVDNFSAGGTFTLTKQRLD 699
++W FK D E SRGWGS +NGDW+N+RNRP+K ++ +A G FT T+QRLD
Sbjct: 1723 GRDQQWGQQSREFKKDRFEGSRGWGS-NNGDWKNKRNRPSKPHEDLNASGIFTTTRQRLD 1781
Query: 698 SFTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKELKIGA 519
FT++EQDILSD E +M +IRRI+HQTGYNDGDPLSADDQSYV+DNV +YHP+K +K+GA
Sbjct: 1782 VFTSQEQDILSDIEPLMLSIRRIMHQTGYNDGDPLSADDQSYVLDNVFHYHPDKAVKMGA 1841
Query: 518 GIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKHPDKADAFLAKYFSRK 339
GI ++ VS+H++FQESRCFY+VSTD KQDFSYRK LENF + K+PD AD F+AKYF+R+
Sbjct: 1842 GIDHVTVSRHSNFQESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPDLADEFIAKYFARR 1901
Query: 338 PSRPGWSRDHASTPDDAGSQQEQ 270
+R TP G+++E+
Sbjct: 1902 GNR-------QRTPAPEGTEEEK 1917
>ref|XP_011020393.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Populus
euphratica] gi|743817375|ref|XP_011020394.1| PREDICTED:
DNA-directed RNA polymerase V subunit 1-like [Populus
euphratica] gi|743817379|ref|XP_011020395.1| PREDICTED:
DNA-directed RNA polymerase V subunit 1-like [Populus
euphratica] gi|743817383|ref|XP_011020396.1| PREDICTED:
DNA-directed RNA polymerase V subunit 1-like [Populus
euphratica]
Length = 1916
Score = 559 bits (1441), Expect = e-156
Identities = 365/916 (39%), Positives = 502/916 (54%), Gaps = 54/916 (5%)
Frame = -2
Query: 2855 VKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMVT 2676
VK +GDAWRIV+D+CLPV LI+T RSIPYAIKQVQELLG+SCAF+ AV+RLS SV MV
Sbjct: 1081 VKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLGVSCAFDTAVQRLSKSVTMVA 1140
Query: 2675 KGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAEK 2496
KGVLK+HL+LL NSMTCAG+LIGF GG K LSRSLD+QVPFTEATL PRKCFE+AAEK
Sbjct: 1141 KGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPFTEATLFTPRKCFEKAAEK 1200
Query: 2495 CHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSSGD 2316
CH +SLSS+V SC+WGKHV VGTGS FD+L DTK+ LN + ++ Y FL +VR ++ G+
Sbjct: 1201 CHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPEGSMDAYSFLNMVRSTAGGE 1260
Query: 2315 ETNTACLGAEIENLDMEDEAMTFDLSPVRD--SDQPTFEDRHEFENNLANPRSKESIQRE 2142
E+ TACLGAE+++L +EDE ++LSP + SD+PTFED EF++ L N + ES +
Sbjct: 1261 ESVTACLGAEVDDLMLEDE--DWNLSPEHNSSSDKPTFEDSAEFQDFLGN-QPAESNWEK 1317
Query: 2141 LSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSKMAKEDSL 1962
+S +D P++ SG W+ VDK D KE
Sbjct: 1318 ISSLKDRPRS---SGNWD--------------------------VDKNDG---AVKEKPW 1345
Query: 1961 SFGEWNSKQPDSLKQSGSSSAWGKMVDNESDSSFAAEPRRSWEQSADKSGNVWTAKNVXX 1782
S G N+ + + + SG +A +M +N + + QS SG W K
Sbjct: 1346 SLG-MNTAEANDVASSGWDTATARMTNNSWNL------ENNVAQSNSFSG--WATKK--- 1393
Query: 1781 XXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKEPQST-GEQSESSPAWKKI---DSLGNL 1614
+ V +E + SN + WG K+ + E + + W K+ D G
Sbjct: 1394 HEPHNGFVTKVQEEPTTSNDWDAG--AAWGRKDRDNKFAETNTTKSWWGKVTDGDESGQN 1451
Query: 1613 PLTAK-------ASGGWDQKFDKDQ-------KHAAQTTSLNSAWSSWNNCEPVKIDSFS 1476
K + GW K +DQ K + T+ + +W S N P
Sbjct: 1452 KSKNKRPEDQDVGTHGWVDKMSQDQLISGWASKTTREATTESLSWDSKGNSNPGDAACGW 1511
Query: 1475 KRVQ----EKSSCDGEWGEKSQDTAKQSGSSFAWEKKFEAGSASPLXXXXXXXXXXXGWE 1308
K E ++ D WG+ + ++ Q+ ++ W K SP E
Sbjct: 1512 KAASTWGAENTAGDKLWGK--EVSSNQADTASGWGK-----PKSP--------------E 1550
Query: 1307 LAIDKAQRLVCQATIMDSSWSSWGRGETNKEERLSNSGQEDASNDHKWGAKESQSMGKQS 1128
+++ ++ SS G G K E S +GQ + WG K + + Q+
Sbjct: 1551 ISLGWGSPKESVKSVRGWGASSSGGGRDKKTENQSLAGQGKEAGG--WGNKLTSN---QA 1605
Query: 1127 GFSSGWGRKVSSNENKA-----DENKDPARVATGNYSDWSKMNTDLVQGERSLATNAEEG 963
SGWG+ SS ++ + K+ N + ++ T+ +SL +E
Sbjct: 1606 DTGSGWGKPKSSENSQGWGLSKESGKEVHGWGVPNSAGGNRSGTNNKNENQSLVEQGKES 1665
Query: 962 SWRSGGAIGINID----GERSKSAGTRAWENKKD----------AHSQRG-----PRKW- 843
W + + G+ A + W + ++ HS G ++W
Sbjct: 1666 GWDNKASSNQEAMASGWGKPKSPALSEGWGSPREPVKAVHGWGVPHSGGGNGSGRDQQWG 1725
Query: 842 -----FKGDGNESSRGWGSPSNGDWRNQRNRPAKAVDNFSAGGTFTLTKQRLDSFTAEEQ 678
FK D E SRGWG +NGDW+N+RNRP+K ++ +A FT T+QRLD FT +EQ
Sbjct: 1726 QQSREFKKDRFEGSRGWGL-NNGDWKNKRNRPSKLQEDLNASSIFTTTRQRLDLFTTQEQ 1784
Query: 677 DILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKELKIGAGIKYIMV 498
DILSD E +M +IRRI+HQTGYNDGDPLSADDQSYV+DNV +YHP+K +KIGAGI ++ V
Sbjct: 1785 DILSDIEPLMLSIRRIMHQTGYNDGDPLSADDQSYVLDNVFHYHPDKAVKIGAGIDHVTV 1844
Query: 497 SKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKHPDKADAFLAKYFSRKPSRPGWS 318
S+H++FQESRCFY+VSTD KQDFSYRK LENF + K+PD AD F+AKYF+R+ +R
Sbjct: 1845 SRHSNFQESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPDLADEFIAKYFARRGNR---- 1900
Query: 317 RDHASTPDDAGSQQEQ 270
TP G+++E+
Sbjct: 1901 ---QRTPAPEGTEEEK 1913
>ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
gi|778702723|ref|XP_011655251.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Cucumis sativus]
gi|700195913|gb|KGN51090.1| hypothetical protein
Csa_5G435050 [Cucumis sativus]
Length = 1963
Score = 535 bits (1378), Expect = e-149
Identities = 353/917 (38%), Positives = 479/917 (52%), Gaps = 68/917 (7%)
Frame = -2
Query: 2858 AVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMV 2679
AVK GDAWR V+D CLPV LIDT RS+PYAIKQVQELLGISCAF+Q ++RLS SV MV
Sbjct: 1082 AVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMV 1141
Query: 2678 TKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAE 2499
+KGVL DHL+LLANSMTC GN+IGFN GG KALSR+L++QVPFTEATL PRKCFE+AAE
Sbjct: 1142 SKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTPRKCFEKAAE 1201
Query: 2498 KCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSSG 2319
KCH +SLSS+V SCSWGKHVAVGTGS FDIL D K++ Q ++VY+FL +VR S
Sbjct: 1202 KCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVVDVYNFLHMVR-SGKS 1260
Query: 2318 DETNTACLGAEIENLDMEDE--AMTFDLSPVRDSDQPTFEDRHEFENNLANPRSKESIQR 2145
+E +ACLG EIE++ +EDE +T P S++P FED EFE+ L N
Sbjct: 1261 EEPTSACLGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFEHCLDN------YPG 1314
Query: 2144 ELSWERDSPQTAELSGG--WEXXXXXXXXXXXXXXXXXXXXXXXXXAV---DKEDNFSKM 1980
E WE+ A +GG WE V + ++N S
Sbjct: 1315 ESKWEKAPSLGAVSTGGGQWESNENGKATNSSDGNDWSGWGRKAEPDVTVTNAQENTSNS 1374
Query: 1979 AKEDSLSFGEWNSKQPDSLKQSGSSSAWGKMVDNESDSSFAAEPRR-SWEQSADKSGNVW 1803
A + + S W +K +S + S+ K V+ +S +S P+ W+ S + W
Sbjct: 1375 AWDTTSS---WGNKATNSSNDNDWSNCSTKEVERDSFTSMEKTPKSGGWD-----SASTW 1426
Query: 1802 TAKNVXXXXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKEPQSTGEQSESSPAWKKIDSL 1623
K K+ SF K +W + +++E+ A+ K +
Sbjct: 1427 GTKT---------------KDDSFKRETAPKKSSQWSGLQK----DKAETQDAFHKKAEM 1467
Query: 1622 GNLPLTAKASGGWDQKFDKDQKHAAQTTSLNSAWSSWNNCEPVKIDSFSKRVQEKSSCDG 1443
A SGGW+ K A + + +W++ K +SF +VQE SS
Sbjct: 1468 ------ASKSGGWEDK--------AWSRGTSKTEDNWSSQVKDKAESFQVQVQEVSSKTN 1513
Query: 1442 EWGEKSQDTAKQSGSSFAWEKKFEAGSASPLXXXXXXXXXXXGWELAIDKAQRLVCQATI 1263
WG T K SG E + G AS W+ Q+L T
Sbjct: 1514 GWGSTGGWT-KNSGGDHQSEAGWNDGQAS-----MDREKVSDRWDR--KATQKLESHQT- 1564
Query: 1262 MDSSWSSWGRGETNKEERLSNSGQEDASNDHKWGAKES---------------------- 1149
SSW S G++ D+ +H W ++S
Sbjct: 1565 --SSWGSPTVGDSKDSFPSKAVDHSDSVVNHSWDRQKSPEASQGFGNDAWGQQKSRDVIK 1622
Query: 1148 QSMGKQSGFSSGWGRKVSSNE------------------------NKADENKDPARVATG 1041
S+ SGWG ++ SNE K D+ D +
Sbjct: 1623 PSLANNESNLSGWGSQIESNEGSDHGFDQVTNEQKSSDTRGWDSQEKTDKPWDKQKSLEA 1682
Query: 1040 NYSDWSKMNTDL---VQGERSLATNAEEGSWRSGGAIG------INIDGERSKSAG-TRA 891
+ S W N L Q +R+ + E S ++ E+ KS +
Sbjct: 1683 SQS-WGSQNDSLGSWGQPQRASEECSRESQDDSSTQFSQLKPPETSLGWEQQKSPEVSHG 1741
Query: 890 WENKKDAHSQRGPRKWFKGDGNESSRGWGSPSNGDWRNQRNRPAKAV----DNFSAGGTF 723
W + K++ Q W K N+ S+GWG + G+W+N++NRP K+ D+ + +
Sbjct: 1742 WGSNKESSEQTSSHGWDK--KNQGSKGWGG-NAGEWKNRKNRPPKSPGMSNDDANLRALY 1798
Query: 722 TLTKQRLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHP 543
T + QRLD FT+EEQDIL+D E +MQ+IR+++HQ+GYNDGDPLSA+DQS+V+ +V N+HP
Sbjct: 1799 TASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHP 1858
Query: 542 EKELKIGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKHPDKADAF 363
+K K+GAGI + MVS+H+SFQESRCFYVV+TD HK+DFSYRK L+NF + K+PD A+ F
Sbjct: 1859 DKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMF 1918
Query: 362 LAKYFSRKPSRPGWSRD 312
+AKYF RKP RP +RD
Sbjct: 1919 VAKYF-RKP-RPNRNRD 1933
>ref|XP_008348940.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Malus
domestica]
Length = 904
Score = 527 bits (1357), Expect = e-146
Identities = 344/894 (38%), Positives = 486/894 (54%), Gaps = 41/894 (4%)
Frame = -2
Query: 2855 VKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMVT 2676
VK +GDAWRIV+D+CLPV LIDT RSIPYAIKQ+QELLG+SCAF+QAV+RL+T+V MV
Sbjct: 60 VKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFDQAVQRLATAVTMVA 119
Query: 2675 KGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAEK 2496
KGVLK+HL+LLANSMTCAGN +GFN G KALSR+L++QVPFTEATL PR+CFERAAEK
Sbjct: 120 KGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEATLFTPRRCFERAAEK 179
Query: 2495 CHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSSGD 2316
CH++SLSS+V SCSWGKHVAVGTGS FDIL DT++ LNQ+ G++V++FL +V +++G+
Sbjct: 180 CHMDSLSSIVASCSWGKHVAVGTGSRFDILWDTREGGLNQEGGLDVFNFLHMV-STANGE 238
Query: 2315 ETNTACLGAEIENLDMEDEAMTFDLSPVRDS--DQPTFEDRHEFENNLANPRSKESIQRE 2142
E T LGAE+++L + DE LSP DS D+P FED EFE + E++ +
Sbjct: 239 EATTGALGAEVDDLMVVDELADSCLSPELDSGLDKPVFEDIIEFEES-------ETLPGK 291
Query: 2141 LSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSKMAKEDSL 1962
SWE+D S W +ED S K D+
Sbjct: 292 SSWEKD-------SSVWGTNR------------------------TREDATSSWDKNDTS 320
Query: 1961 SFGEWNSKQPDSLKQSGSSSAWG-----KMVDNESDSSFAAEPRRS-WEQSADKSGNVWT 1800
S+ + +K+P ++S WG ++ ++ A E S W ++ + + + W
Sbjct: 321 SWDKTPAKEP-------ATSTWGIGKAAEVTTPAWRANTAGEASTSAWGETGEPTTSAWG 373
Query: 1799 AK---NVXXXXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKEPQ----------STGEQS 1659
A +P+D + + + K WGA P+ S+G+Q
Sbjct: 374 ASKGGENDWSGRVAEKVAPIDLQPTI--KAVDEKDNGWGAVSPRETETGNDXAWSSGQQK 431
Query: 1658 ESS----PAW--KKIDSLGNLPLTAKASGGWDQKFDKDQKHAAQTTSLNSAWSSWNNCEP 1497
+SS +W K P A +SG + D Q S + SSW
Sbjct: 432 KSSEISTSSWGQKNPPETETQPWGAVSSGETETGNDNAWSSGQQKKSSEISTSSWG---- 487
Query: 1496 VKIDSFSKRVQEKSS--CDGEWGEKSQDTAKQSGSSFAWEKKFEAGSASPLXXXXXXXXX 1323
+ +++S Q+KSS WG+K+ + + E G+A+
Sbjct: 488 -QKNAWSSGQQKKSSEISTSSWGQKNPPETETQPWGAVSSGETETGNAN----------- 535
Query: 1322 XXGWELAIDKAQRLVCQATIMDSSWSSWGRGETNKEERLSNS-GQEDASNDHKWGAKESQ 1146
W K + I SSW ET + + S G+ + ND W + + +
Sbjct: 536 --AWSSGQQKK-----SSEISTSSWGQKNPPETETQPWGAVSYGETETGNDKAWSSGQQK 588
Query: 1145 SMGKQSGFSSGWGRK-VSSNENKADENKDPARVATGNYSDWSKMNTDLVQGERSLATNAE 969
+ S +S WG+K E + +GN + WS G++ ++
Sbjct: 589 KSSEIS--TSSWGQKNPPVIETQPWGAVSSGETESGNDNAWS-------SGQQKKSSEIS 639
Query: 968 EGSWRSGGAIGINIDGERSKSAGTRAWE------NKKDAHSQRGPRKWFKGDGNESSRGW 807
SW N ++ A W+ N + H Q G K + +G S+ W
Sbjct: 640 TSSWGQK-----NPPETETQPASLSGWDSPSGDGNTGERHHQWGQNKKSRFEG---SKSW 691
Query: 806 GSPSNGDWRNQRNRPAK----AVDNFSAGGTFTLTKQRLDSFTAEEQDILSDFEQMMQNI 639
S S G+W+N +NRPAK DN S G +T T+QRLD F +EEQD+LS E +M++I
Sbjct: 692 VS-SPGEWKN-KNRPAKPPGMVNDNSSVVGLYTATRQRLDMFPSEEQDVLSKIEPVMRSI 749
Query: 638 RRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKELKIGAGIKYIMVSKHASFQESRCFY 459
RRI+HQ+GYNDGDPLSADDQS+++DNVLNYHP+K +K+G+GI ++ V +H SFQ+SRCF+
Sbjct: 750 RRIMHQSGYNDGDPLSADDQSFILDNVLNYHPDKAVKMGSGIGHLTVDRHGSFQDSRCFF 809
Query: 458 VVSTDDHKQDFSYRKSLENFARVKHPDKADAFLAKYFSRKPSRPGWSRDHASTP 297
VV+TD HK+DFSYRK LEN+ + K+ D A+ F+ KYF+R+ G +R+ TP
Sbjct: 810 VVTTDGHKEDFSYRKCLENYIKEKYADVAETFIGKYFTRR----GGNRERNPTP 859
>ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha curcas]
Length = 1980
Score = 523 bits (1348), Expect = e-145
Identities = 351/882 (39%), Positives = 473/882 (53%), Gaps = 39/882 (4%)
Frame = -2
Query: 2858 AVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMV 2679
AVK +GDAWRIV+D+CLPV LIDT RSIPYAIKQ+QELLG+SCAF+QAV+RLSTSV +V
Sbjct: 1088 AVKQSGDAWRIVLDSCLPVLHLIDTTRSIPYAIKQIQELLGVSCAFDQAVQRLSTSVTIV 1147
Query: 2678 TKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAE 2499
KGVLK+HL+LLANSMTCAGNL+GFN GG K+LSRSLDVQVPFT+ATL PRKCFERAAE
Sbjct: 1148 AKGVLKEHLILLANSMTCAGNLVGFNSGGYKSLSRSLDVQVPFTDATLFTPRKCFERAAE 1207
Query: 2498 KCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSSG 2319
KCHV++LSS+V SCSWGK+VAVGTGS FD+L D K+ L+Q+ I+VY+FL +VR S++G
Sbjct: 1208 KCHVDTLSSIVASCSWGKNVAVGTGSRFDVLWDKKEACLDQEGSIDVYEFLNMVRCSANG 1267
Query: 2318 DETNTACLGAEIENLDMEDEAMTFDLSPVRD--SDQPTFEDRHEFENNLANPRSKESIQR 2145
+E +TACLGA++++L ++D ++LSP + SD+PTFEDR EF+N L N +
Sbjct: 1268 EE-STACLGADVDDLMLDDGMDDWNLSPEHNFGSDKPTFEDRAEFQNCLDN--------Q 1318
Query: 2144 ELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSKMAKEDS 1965
WE+ S S G A + ++ S A E+S
Sbjct: 1319 PADWEKASYAVNGSSSG----GNWGGDKNMETDKENSWSGWGRNAAETQNALSTKAHEES 1374
Query: 1964 LSFGEW----------NSKQPDSLKQSGSSSAWG-----------KMVDNESDSSFAAEP 1848
W N K +++ ++ S S WG K V ES+ S +
Sbjct: 1375 DKSNSWDTAGGWQAQANGKAENNVAETDSWSGWGTRKTESSDVPAKKVQEESEHSIGWDT 1434
Query: 1847 RRSWEQSADKSGNVWTAKNVXXXXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKEPQSTG 1668
+ +W+ + SG T K+V D + + R ++ + G K + TG
Sbjct: 1435 KAAWQTNI--SGG--TPKSVPEP----------DSWSGWETR-KNEVPDDHGRKAQEETG 1479
Query: 1667 EQSESSPAWKKIDSLGNLPLTAKASGGWDQKFDKDQKHAAQTTSLNSAWSSWNNCEPVKI 1488
+ A W ++ + D + S + S EPV
Sbjct: 1480 RPGDHD-----------------AGAAWGRRAEVDDNSWGKPKSPQVSLSWGTPKEPVNA 1522
Query: 1487 DSFSKRVQEK------SSCDGEWGEKSQDTAKQSGSSFAWEKKFEAGSASPLXXXXXXXX 1326
S K S +WG KS+ G + E AG P
Sbjct: 1523 GSLRGWDLPKAGGSNGSEIQPQWG-KSKPPEGSHGWGSSNEPVKAAGWNQPNAGGSDATK 1581
Query: 1325 XXXGWELAIDKAQRL---VCQATIMDSSWSSWGRGETNKEERLSNSGQEDASN-DHKWGA 1158
WE + + + W G + ER G+ +S WG+
Sbjct: 1582 RQQQWEKPKSPEASHGWGPSKEPVKAAGWDLENAGGGDGSERQQQWGKSKSSEVSQSWGS 1641
Query: 1157 -KESQSMGKQSGFSSGWGRKVSSNENKADENKDPARVATGNYSDWSK-MNTDLVQGERSL 984
KES ++G S GWG N ++ + P + W K + D+ QG S
Sbjct: 1642 PKES----VKAGSSQGWG---MPNAEGSEGGERPRQ--------WGKPKSPDVSQGWGSP 1686
Query: 983 ATNAEEGSWRSGGAIGINIDGERSKSAGTRAWENKKDAHSQRGPRKWFKGDGNESSRGWG 804
+ + S + G +AG +K Q G FK + E SRGWG
Sbjct: 1687 KESVKAASSKGWGL----------PNAGATHGSERKQWGQQSGE---FKKNRAEGSRGWG 1733
Query: 803 SPSNGDWRNQRNRPAKAV----DNFSAGGTFTLTKQRLDSFTAEEQDILSDFEQMMQNIR 636
SN DW++ +NRPAK+ D+ S GG +T+T+QRLD FT++EQDILS+ E +M IR
Sbjct: 1734 --SNPDWKS-KNRPAKSPGIVNDDSSVGGIYTVTRQRLDMFTSQEQDILSEIEPLMLAIR 1790
Query: 635 RIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKELKIGAGIKYIMVSKHASFQESRCFYV 456
RI+H +GYNDGD LSA DQSY++DNV NYHP+K K+GAGI ++ V+KH+SFQ++RCFYV
Sbjct: 1791 RIMHHSGYNDGDTLSAADQSYILDNVFNYHPDKAAKMGAGIDHLTVNKHSSFQDTRCFYV 1850
Query: 455 VSTDDHKQDFSYRKSLENFARVKHPDKADAFLAKYFSRKPSR 330
VSTD +QDFSYRK LENF + K+PD A+ F KYF+R SR
Sbjct: 1851 VSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSR 1892
>gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas]
Length = 1821
Score = 523 bits (1348), Expect = e-145
Identities = 351/882 (39%), Positives = 473/882 (53%), Gaps = 39/882 (4%)
Frame = -2
Query: 2858 AVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMV 2679
AVK +GDAWRIV+D+CLPV LIDT RSIPYAIKQ+QELLG+SCAF+QAV+RLSTSV +V
Sbjct: 929 AVKQSGDAWRIVLDSCLPVLHLIDTTRSIPYAIKQIQELLGVSCAFDQAVQRLSTSVTIV 988
Query: 2678 TKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAE 2499
KGVLK+HL+LLANSMTCAGNL+GFN GG K+LSRSLDVQVPFT+ATL PRKCFERAAE
Sbjct: 989 AKGVLKEHLILLANSMTCAGNLVGFNSGGYKSLSRSLDVQVPFTDATLFTPRKCFERAAE 1048
Query: 2498 KCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSSG 2319
KCHV++LSS+V SCSWGK+VAVGTGS FD+L D K+ L+Q+ I+VY+FL +VR S++G
Sbjct: 1049 KCHVDTLSSIVASCSWGKNVAVGTGSRFDVLWDKKEACLDQEGSIDVYEFLNMVRCSANG 1108
Query: 2318 DETNTACLGAEIENLDMEDEAMTFDLSPVRD--SDQPTFEDRHEFENNLANPRSKESIQR 2145
+E +TACLGA++++L ++D ++LSP + SD+PTFEDR EF+N L N +
Sbjct: 1109 EE-STACLGADVDDLMLDDGMDDWNLSPEHNFGSDKPTFEDRAEFQNCLDN--------Q 1159
Query: 2144 ELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSKMAKEDS 1965
WE+ S S G A + ++ S A E+S
Sbjct: 1160 PADWEKASYAVNGSSSG----GNWGGDKNMETDKENSWSGWGRNAAETQNALSTKAHEES 1215
Query: 1964 LSFGEW----------NSKQPDSLKQSGSSSAWG-----------KMVDNESDSSFAAEP 1848
W N K +++ ++ S S WG K V ES+ S +
Sbjct: 1216 DKSNSWDTAGGWQAQANGKAENNVAETDSWSGWGTRKTESSDVPAKKVQEESEHSIGWDT 1275
Query: 1847 RRSWEQSADKSGNVWTAKNVXXXXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKEPQSTG 1668
+ +W+ + SG T K+V D + + R ++ + G K + TG
Sbjct: 1276 KAAWQTNI--SGG--TPKSVPEP----------DSWSGWETR-KNEVPDDHGRKAQEETG 1320
Query: 1667 EQSESSPAWKKIDSLGNLPLTAKASGGWDQKFDKDQKHAAQTTSLNSAWSSWNNCEPVKI 1488
+ A W ++ + D + S + S EPV
Sbjct: 1321 RPGDHD-----------------AGAAWGRRAEVDDNSWGKPKSPQVSLSWGTPKEPVNA 1363
Query: 1487 DSFSKRVQEK------SSCDGEWGEKSQDTAKQSGSSFAWEKKFEAGSASPLXXXXXXXX 1326
S K S +WG KS+ G + E AG P
Sbjct: 1364 GSLRGWDLPKAGGSNGSEIQPQWG-KSKPPEGSHGWGSSNEPVKAAGWNQPNAGGSDATK 1422
Query: 1325 XXXGWELAIDKAQRL---VCQATIMDSSWSSWGRGETNKEERLSNSGQEDASN-DHKWGA 1158
WE + + + W G + ER G+ +S WG+
Sbjct: 1423 RQQQWEKPKSPEASHGWGPSKEPVKAAGWDLENAGGGDGSERQQQWGKSKSSEVSQSWGS 1482
Query: 1157 -KESQSMGKQSGFSSGWGRKVSSNENKADENKDPARVATGNYSDWSK-MNTDLVQGERSL 984
KES ++G S GWG N ++ + P + W K + D+ QG S
Sbjct: 1483 PKES----VKAGSSQGWG---MPNAEGSEGGERPRQ--------WGKPKSPDVSQGWGSP 1527
Query: 983 ATNAEEGSWRSGGAIGINIDGERSKSAGTRAWENKKDAHSQRGPRKWFKGDGNESSRGWG 804
+ + S + G +AG +K Q G FK + E SRGWG
Sbjct: 1528 KESVKAASSKGWGL----------PNAGATHGSERKQWGQQSGE---FKKNRAEGSRGWG 1574
Query: 803 SPSNGDWRNQRNRPAKAV----DNFSAGGTFTLTKQRLDSFTAEEQDILSDFEQMMQNIR 636
SN DW++ +NRPAK+ D+ S GG +T+T+QRLD FT++EQDILS+ E +M IR
Sbjct: 1575 --SNPDWKS-KNRPAKSPGIVNDDSSVGGIYTVTRQRLDMFTSQEQDILSEIEPLMLAIR 1631
Query: 635 RIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKELKIGAGIKYIMVSKHASFQESRCFYV 456
RI+H +GYNDGD LSA DQSY++DNV NYHP+K K+GAGI ++ V+KH+SFQ++RCFYV
Sbjct: 1632 RIMHHSGYNDGDTLSAADQSYILDNVFNYHPDKAAKMGAGIDHLTVNKHSSFQDTRCFYV 1691
Query: 455 VSTDDHKQDFSYRKSLENFARVKHPDKADAFLAKYFSRKPSR 330
VSTD +QDFSYRK LENF + K+PD A+ F KYF+R SR
Sbjct: 1692 VSTDGCEQDFSYRKCLENFVKGKYPDLAEEFNGKYFARPRSR 1733
>ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
gi|659072503|ref|XP_008465867.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Cucumis melo]
gi|659072505|ref|XP_008465874.1| PREDICTED: DNA-directed
RNA polymerase V subunit 1 [Cucumis melo]
Length = 1964
Score = 521 bits (1343), Expect = e-144
Identities = 343/912 (37%), Positives = 483/912 (52%), Gaps = 63/912 (6%)
Frame = -2
Query: 2858 AVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMV 2679
A+K GDAWR V+D CLPV LIDT RS+PYAIKQVQELLGISCAF+Q ++RLS SV MV
Sbjct: 1082 ALKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMV 1141
Query: 2678 TKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAE 2499
+KGVL DHL+LLANSMTC GN+IGFN GG KALSR+L++QVPFTEATL PRKCFE+AAE
Sbjct: 1142 SKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTPRKCFEKAAE 1201
Query: 2498 KCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSSG 2319
KCH +SLSS+V SCSWGKHVAVGTGS FDIL D K++ Q ++VY+FL +VR S
Sbjct: 1202 KCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVVDVYNFLHMVR-SGKS 1260
Query: 2318 DETNTACLGAEIENLDMEDE--AMTFDLSPVRDSDQPTFEDRHEFENNLANPRSKESIQR 2145
+E +ACLG E+E++ +EDE +T P S++P FED EFE+ L N
Sbjct: 1261 EEPTSACLGEEVEDIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFEHCLDNDPG------ 1314
Query: 2144 ELSWERDSPQTAELSGG--WEXXXXXXXXXXXXXXXXXXXXXXXXXAV---DKEDNFSKM 1980
E WE+ A +GG WE V + ++N S
Sbjct: 1315 ESKWEKAPSLGAVSTGGGQWESNGNGKATKSSDDNDWSGWGRKAEPDVTVTNAQENTSNS 1374
Query: 1979 AKEDSLSFGEWNSKQPDSLKQSGSSSAWGKMVDNESDSSFAAEPRR-SWEQSADKSGNVW 1803
A + + S W +K + + S+ K V+ +S +S P+ W+ + + W
Sbjct: 1375 AWDTTSS---WGNKATITSNDNDWSNCSTKEVERDSFTSMEKTPKSGGWD-----TASTW 1426
Query: 1802 TAKNVXXXXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKEPQSTGEQSESSPAWKKIDSL 1623
K K+ SF+ K +W + + +++E+ A+ K +
Sbjct: 1427 GTKT---------------KDDSFNGETAPEKSNQWSSLQK----DKAETQDAFHKKAEM 1467
Query: 1622 GNLPLTAKASGGWDQKFDKDQKHAAQTTSLNSAWSSWNNCEPVKIDSFSKRVQEKSSCDG 1443
A S GW+ K A + + +W+ K +SF VQ+ SS
Sbjct: 1468 ------ASKSSGWEDK--------AWSRGTSKTEDNWSGQVKDKAESFQVPVQKVSSKTN 1513
Query: 1442 EWGEKSQDTAKQSGSSFAWEKKFEAGSASPLXXXXXXXXXXXGWE-LAIDKAQR------ 1284
WG T K SG E + G AS W+ A K +
Sbjct: 1514 GWGSTGGWT-KNSGGDHQAEAGWNDGQAS-----MDREEASDRWDRKATQKLESHQTSSW 1567
Query: 1283 ---LVCQA-------------TIMDSSW-------SSWGRG-----ETNKEERLSNSGQE 1188
VC + ++++ SW +S G G + ++ + S
Sbjct: 1568 GSPTVCDSKDSFPSKAVDHGDSVVNHSWDRQKSPEASQGFGNDAWQQQKSQDVIKPSHAN 1627
Query: 1187 DASNDHKWGAKESQSMGKQSGFSSGWGRKVSS------NENKADENKDPARVATGNYSDW 1026
+ SN WG++ + G GF + SS ++ K D+ D + + S W
Sbjct: 1628 NESNRSGWGSQIESNEGSDHGFDQVTSEQKSSDTRGWDSQEKMDKPWDKQKSLEASQS-W 1686
Query: 1025 SKMNTDL------VQGERSLATNAEEGSWRSGGAI---GINIDGERSKSAG-TRAWENKK 876
N L + + +++ S + ++ E+ KS + W + K
Sbjct: 1687 GSQNDSLGSWGQPQRASEEFSRGSQDDSSTQFSQLKPPETSLGWEQQKSPEVSHGWGSHK 1746
Query: 875 DAHSQRGPRKWFKGDGNESSRGWGSPSNGDWRNQRNRPAK----AVDNFSAGGTFTLTKQ 708
++ Q W K N+ S+GWG + G+W+N++NRP K + D+ + +T + Q
Sbjct: 1747 ESSEQTSSHGWDK--KNQGSKGWGG-NAGEWKNRKNRPPKSPGMSSDDANLRALYTASGQ 1803
Query: 707 RLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKELK 528
RLD FT EEQDIL+D E +MQ+IR+++HQ+GYNDGDPLSA+DQS+V+ +V N+HP+K K
Sbjct: 1804 RLDMFTTEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAK 1863
Query: 527 IGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKHPDKADAFLAKYF 348
+GAGI + MVS+H+SFQESRCFYVV+TD HK+DFSYRK L+NF + K+PD A+ F+AKYF
Sbjct: 1864 MGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDMAEMFVAKYF 1923
Query: 347 SRKPSRPGWSRD 312
RKP RP +RD
Sbjct: 1924 -RKP-RPNRNRD 1933
>ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Gossypium raimondii] gi|763800932|gb|KJB67887.1|
hypothetical protein B456_010G216600 [Gossypium
raimondii]
Length = 1966
Score = 503 bits (1294), Expect = e-139
Identities = 349/915 (38%), Positives = 486/915 (53%), Gaps = 59/915 (6%)
Frame = -2
Query: 2858 AVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMV 2679
AVK GDAWR V+D CLPV +IDT+RSIPYAIKQV++LLGISCAFEQAV+RLSTSV MV
Sbjct: 1078 AVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISCAFEQAVQRLSTSVSMV 1137
Query: 2678 TKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAE 2499
T+GVLK+HL+LLANSMTC GNLIGFN GG K LSRSL++QVPFTEATL PRKCFERAAE
Sbjct: 1138 TRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFTEATLFTPRKCFERAAE 1197
Query: 2498 KCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSSG 2319
KC+ +SLSS+V SCSWGK VAVGTGS FD+L + + +Q +G++VY+FL +V G + G
Sbjct: 1198 KCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWNQESGS-DQMSGMDVYNFLHMVSG-AGG 1255
Query: 2318 DETNTACLGAEIENLDMEDEAMTFDLSPVRDSDQPTFEDRHEFENNLANPRSKESIQREL 2139
+NTACLG E+++L M++ ++ D S D+P FED EFENNL + + ++++
Sbjct: 1256 SNSNTACLGEEVDDL-MDEWCLSPDHS--TGLDKPVFEDAAEFENNLDGQSASANWEKDV 1312
Query: 2138 SWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSKMAKEDSLS 1959
S ++ S + S GW K + S+ D+LS
Sbjct: 1313 SLDKVSDVGWDAS-GWNKNAEDVDKFAAAATSSEKQNEWSGWGASKSN--SQDVGWDALS 1369
Query: 1958 FGEWNSKQPDSLKQSGSSSAWGKMVDNESDSSFAAEPRRSWEQSADKSGNVWTAKNVXXX 1779
WN D K + ++++ K NE S + A +S + + K W A +
Sbjct: 1370 --GWNKNAEDGDKFAAAATSSKK--QNEC-SDWGASKSKSQDVVSPKVDVGWDALSAWHK 1424
Query: 1778 XXXXXXXSPVDKEASFSNRVQSPKYGEWGAKE-------PQSTG----EQSESSPAW--K 1638
A+ S++ QS ++ +WG + P++ G EQ+E S W K
Sbjct: 1425 NAEDGDNFAA---AASSSKKQS-EWSDWGMSKSKSQDVSPKTDGTCMKEQTELS-GWEMK 1479
Query: 1637 KIDSLGNLPLTAKAS--GGWDQKFD---KDQKHAAQTTSLNSAWSSWNNCEPVKIDSFSK 1473
K D+ LP+ +AS GWD ++ S + WS W DS K
Sbjct: 1480 KFDTRDVLPVEERASKPNGWDSGASWGIMSKESEELDASAAAPWSGWGT-----KDSSPK 1534
Query: 1472 RVQEKSSCDGEWGEKS---QDTAKQSGSSF--------------AWEKKFEAGSASPLXX 1344
+ +K+S W S + TA S F W+ K A P+
Sbjct: 1535 KSLDKTSKSSSWDTVSSWGRKTAAVHESGFIGNDNQPGQGRIENEWDNK--ASQVKPV-- 1590
Query: 1343 XXXXXXXXXGWELAIDKAQRLVCQATIMDSSWSSWGRGETNKEERLSNSGQEDASNDHKW 1164
GW + + +V Q+T SSW + ++ S SG +S
Sbjct: 1591 -----QSASGWNNKV--TEEMVVQST------SSWDEKASWEKPVQSMSGWVSSS----- 1632
Query: 1163 GAKESQSMGKQSGFSSGWGRKVSSNENKA-DENKDPARVATGNYSDWSKMNTDLVQGERS 987
A +S K +S W ++ + N A D+ K PA S W + +
Sbjct: 1633 AAGSDESPTKGCSKNSNWDQQKAQTMNNAWDQQKSPA-----TNSSWDRQKSSTANNSWD 1687
Query: 986 LATNAEEGSWRSGGAIGINIDGERSKSAG-TRAWENKKDAHSQRGPRKWFKGDGNESSRG 810
SW + IN ++ KS ++ W D + W G ++++
Sbjct: 1688 QQKPPANSSWDQEKSPTINNSWDQQKSPECSQGWGTLNDLNQPASSSGWDMPQGEDNTQS 1747
Query: 809 -----WG-SPSNGDW---RNQRNRPAKAV----DNFSAGGTFTLTKQRLDSFTAEEQDIL 669
WG S + W N+++RP K D+ S +T+T+QRLD FT+EE+DIL
Sbjct: 1748 EKQHQWGQSKGSRRWASDANKKSRPLKPARMMNDDSSMAAMYTVTRQRLDMFTSEEKDIL 1807
Query: 668 SDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKELKIGAGIKYIMVSKH 489
D E +MQ+IR+I+HQTGYNDGDPLSADDQ++V+DNVL +HP+K +K+GAGI Y+MV+KH
Sbjct: 1808 LDVEPLMQSIRKIMHQTGYNDGDPLSADDQTFVLDNVLAHHPDKAVKMGAGIDYVMVNKH 1867
Query: 488 ASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKHPDKADAFLAKYFSRK---------P 336
+ F ++RC YVV+TD HKQDFSY K LEN + K+PD A+AF+AKYF + P
Sbjct: 1868 SLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGKYPDLAEAFVAKYFRKSRGNRERGVAP 1927
Query: 335 SRPGWSRDHASTPDD 291
+RD + T DD
Sbjct: 1928 ENSQGNRDQSVTQDD 1942
>gb|KRH13386.1| hypothetical protein GLYMA_15G235900 [Glycine max]
gi|947064126|gb|KRH13387.1| hypothetical protein
GLYMA_15G235900 [Glycine max] gi|947064127|gb|KRH13388.1|
hypothetical protein GLYMA_15G235900 [Glycine max]
Length = 2082
Score = 499 bits (1286), Expect = e-138
Identities = 342/1013 (33%), Positives = 490/1013 (48%), Gaps = 149/1013 (14%)
Frame = -2
Query: 2861 DAVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMM 2682
+AVK +GDAWR+V+DACLPV LIDT RSIPYAIKQ+QELLGISC F+QA++R++ SV M
Sbjct: 1079 EAVKQSGDAWRVVLDACLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKM 1138
Query: 2681 VTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAA 2502
V KGVL++HL+LLA+SMTC GNL+GFNIGG KALSR L++QVPFT+ATL P+KCFERAA
Sbjct: 1139 VAKGVLREHLILLASSMTCGGNLVGFNIGGYKALSRQLNIQVPFTDATLFTPKKCFERAA 1198
Query: 2501 EKCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSS 2322
EKCH +SLSS+V SCSWGKHVAVGTGS FD++ D +++ N+ G++VY FL +V+ ++
Sbjct: 1199 EKCHTDSLSSIVASCSWGKHVAVGTGSKFDVVWDANEIKSNEIEGMDVYSFLHMVKSFTN 1258
Query: 2321 GDETNTACLGAEIENLDMEDEAMTFDLSPVRDSD-QPTFEDRHEFENNLANPRSKESIQR 2145
G+E ACLG +I++L +E+E M +SP +S + FE+ E N +
Sbjct: 1259 GEEETDACLGEDIDDL-LEEEYMDLGMSPQHNSGFEAVFEENPEVLNGSTSN-------- 1309
Query: 2144 ELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDN--------- 1992
W+ S Q + W V++ED+
Sbjct: 1310 --GWDVSSNQGESKTNEWSGWASSNKAEIKDGRSEIAPKNSWGKTVNQEDSSKSNPWSTS 1367
Query: 1991 -FSKMAKEDSLSFGEWNSKQ---------------PDSLKQSGSSSAWGKMVDNESDSSF 1860
+ K S + W S + D ++ ++WGK V+ E S
Sbjct: 1368 TIADQTKTKSNEWSAWGSNKSEIPVGWASSNKTEIKDGRSETAQENSWGKTVNQEDSSKS 1427
Query: 1859 AAEPRRSWEQSADKSGNVWTAKNVXXXXXXXXXXSPVDK--------------------- 1743
A + A+ N W+A V +
Sbjct: 1428 NAWNTSTTVDHANTKSNEWSAWGSNQSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLG 1487
Query: 1742 --EASFSNRVQSPKYGEWGAKEPQSTGEQSESSPAWKKIDSLGNLPLTAKASGGWDQKFD 1569
+A+ +++ +S ++ WG K+ T E + AW D+ ++ GW +K D
Sbjct: 1488 AWDANAADQTKSSEWSGWG-KKKDVTQEDNSRLGAW---DANAADQTKSRDWSGWGKKKD 1543
Query: 1568 KDQK----------HAAQTTSLNSAWSSWNNCEPVKIDSFSK--------RVQEKSSCDG 1443
Q+ +AA T +S WS W + V + S+ Q KS+
Sbjct: 1544 ITQEDNSRLGAWDANAADQTK-SSEWSGWGKKKDVTQEDNSRLGAWDANTADQTKSNEWS 1602
Query: 1442 EWGEKSQ--------------DTAKQSGSS--FAWEKKFEA--------GSASPLXXXXX 1335
WG+K + +TA Q+ S+ W KK E G+
Sbjct: 1603 GWGKKKEVTQEDNSRLGAWDANTADQTKSNEWSGWGKKKEVTQEDNSRLGAWDANAADQT 1662
Query: 1334 XXXXXXGWELAIDKAQRLVCQATIMDSS---------WSSWG-RGETNKEERLSNS---- 1197
GW D Q + D++ WS WG + E +E+ + +S
Sbjct: 1663 KSNEWSGWGKKKDVTQEDNSRLGAWDANAADQTKSNEWSDWGKKKEVTQEDNVQDSWGSG 1722
Query: 1196 ------GQEDASNDHKWGAKESQSMGKQSGFSSGWGRKVSSNENKADENKDPARVATGNY 1035
QED S WGA + +S S WG+ S EN +G
Sbjct: 1723 KRKDKVTQEDNSGSGGWGANRTDLAKSKSSEWSSWGKNKSEIPAGGSENVQNDSWGSGKL 1782
Query: 1034 SD----------WSKMNTDLVQG--ERSLATNAEEGSWRSGGAIGINIDGERSKSAGTRA 891
D W + + + G E+ G+W++ +G N + KS+ ++A
Sbjct: 1783 EDDTQKENSGSAWVRNKAETIDGGSEKPQEDAWNSGNWKAESKVG-NASWGKPKSSESQA 1841
Query: 890 WENKKDAHSQRGPRKW------------------------FKGDGNESSRGWGSPSNGDW 783
W++ ++ + W FK + E S+G GS + GDW
Sbjct: 1842 WDSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKKNRFEGSQGRGS-NAGDW 1900
Query: 782 RNQRNRPAKAVDNFSAGGTFTLTKQRLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDG 603
+N RNRP +A QRLD +++ EQD+L D E +MQ+IRRI+ Q GYNDG
Sbjct: 1901 KN-RNRPPRA------------PGQRLDIYSSGEQDVLKDIEPIMQSIRRIMQQQGYNDG 1947
Query: 602 DPLSADDQSYVVDNVLNYHPEKELKIGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFS 423
DPL+A+DQ +V++NV +HP+KE K+G GI Y+MV+KH+SFQESRCFYVV D +DFS
Sbjct: 1948 DPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVMVNKHSSFQESRCFYVVCKDGESKDFS 2007
Query: 422 YRKSLENFARVKHPDKADAFLAKYFSRKPSRPGWSRDHASTP--DDAGSQQEQ 270
YRK L N+ K+PD A++FL KYF RKP G D +TP D+A + EQ
Sbjct: 2008 YRKCLANYISKKYPDLAESFLGKYF-RKPRARG---DQTATPGRDEAATPGEQ 2056
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 499 bits (1286), Expect = e-138
Identities = 342/1013 (33%), Positives = 490/1013 (48%), Gaps = 149/1013 (14%)
Frame = -2
Query: 2861 DAVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMM 2682
+AVK +GDAWR+V+DACLPV LIDT RSIPYAIKQ+QELLGISC F+QA++R++ SV M
Sbjct: 1079 EAVKQSGDAWRVVLDACLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKM 1138
Query: 2681 VTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAA 2502
V KGVL++HL+LLA+SMTC GNL+GFNIGG KALSR L++QVPFT+ATL P+KCFERAA
Sbjct: 1139 VAKGVLREHLILLASSMTCGGNLVGFNIGGYKALSRQLNIQVPFTDATLFTPKKCFERAA 1198
Query: 2501 EKCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSS 2322
EKCH +SLSS+V SCSWGKHVAVGTGS FD++ D +++ N+ G++VY FL +V+ ++
Sbjct: 1199 EKCHTDSLSSIVASCSWGKHVAVGTGSKFDVVWDANEIKSNEIEGMDVYSFLHMVKSFTN 1258
Query: 2321 GDETNTACLGAEIENLDMEDEAMTFDLSPVRDSD-QPTFEDRHEFENNLANPRSKESIQR 2145
G+E ACLG +I++L +E+E M +SP +S + FE+ E N +
Sbjct: 1259 GEEETDACLGEDIDDL-LEEEYMDLGMSPQHNSGFEAVFEENPEVLNGSTSN-------- 1309
Query: 2144 ELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDN--------- 1992
W+ S Q + W V++ED+
Sbjct: 1310 --GWDVSSNQGESKTNEWSGWASSNKAEIKDGRSEIAPKNSWGKTVNQEDSSKSNPWSTS 1367
Query: 1991 -FSKMAKEDSLSFGEWNSKQ---------------PDSLKQSGSSSAWGKMVDNESDSSF 1860
+ K S + W S + D ++ ++WGK V+ E S
Sbjct: 1368 TIADQTKTKSNEWSAWGSNKSEIPVGWASSNKTEIKDGRSETAQENSWGKTVNQEDSSKS 1427
Query: 1859 AAEPRRSWEQSADKSGNVWTAKNVXXXXXXXXXXSPVDK--------------------- 1743
A + A+ N W+A V +
Sbjct: 1428 NAWNTSTTVDHANTKSNEWSAWGSNQSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLG 1487
Query: 1742 --EASFSNRVQSPKYGEWGAKEPQSTGEQSESSPAWKKIDSLGNLPLTAKASGGWDQKFD 1569
+A+ +++ +S ++ WG K+ T E + AW D+ ++ GW +K D
Sbjct: 1488 AWDANAADQTKSSEWSGWG-KKKDVTQEDNSRLGAW---DANAADQTKSRDWSGWGKKKD 1543
Query: 1568 KDQK----------HAAQTTSLNSAWSSWNNCEPVKIDSFSK--------RVQEKSSCDG 1443
Q+ +AA T +S WS W + V + S+ Q KS+
Sbjct: 1544 ITQEDNSRLGAWDANAADQTK-SSEWSGWGKKKDVTQEDNSRLGAWDANTADQTKSNEWS 1602
Query: 1442 EWGEKSQ--------------DTAKQSGSS--FAWEKKFEA--------GSASPLXXXXX 1335
WG+K + +TA Q+ S+ W KK E G+
Sbjct: 1603 GWGKKKEVTQEDNSRLGAWDANTADQTKSNEWSGWGKKKEVTQEDNSRFGAWDANAEDQT 1662
Query: 1334 XXXXXXGWELAIDKAQRLVCQATIMDSS---------WSSWG-RGETNKEERLSNS---- 1197
GW D Q + D++ WS WG + E +E+ + +S
Sbjct: 1663 KSNEWSGWGKKKDVTQEDNSRLGAWDANAADQTKSNEWSDWGKKKEVTQEDNVQDSWGSG 1722
Query: 1196 ------GQEDASNDHKWGAKESQSMGKQSGFSSGWGRKVSSNENKADENKDPARVATGNY 1035
QED S WGA + +S S WG+ S EN +G
Sbjct: 1723 KRKDKVTQEDNSGSGGWGANRTDLAKSKSSEWSSWGKNKSEIPAGGSENVQNDSWGSGKL 1782
Query: 1034 SD----------WSKMNTDLVQG--ERSLATNAEEGSWRSGGAIGINIDGERSKSAGTRA 891
D W + + + G E+ G+W++ +G N + KS+ ++A
Sbjct: 1783 EDDTQKENSGSAWVRNKAETIDGGSEKPQEDAWNSGNWKAESKVG-NASWGKPKSSESQA 1841
Query: 890 WENKKDAHSQRGPRKW------------------------FKGDGNESSRGWGSPSNGDW 783
W++ ++ + W FK + E S+G GS + GDW
Sbjct: 1842 WDSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKKNRFEGSQGRGS-NAGDW 1900
Query: 782 RNQRNRPAKAVDNFSAGGTFTLTKQRLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDG 603
+N RNRP +A QRLD +++ EQD+L D E +MQ+IRRI+ Q GYNDG
Sbjct: 1901 KN-RNRPPRA------------PGQRLDIYSSGEQDVLKDIEPIMQSIRRIMQQQGYNDG 1947
Query: 602 DPLSADDQSYVVDNVLNYHPEKELKIGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFS 423
DPL+A+DQ +V++NV +HP+KE K+G GI Y+MV+KH+SFQESRCFYVV D +DFS
Sbjct: 1948 DPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVMVNKHSSFQESRCFYVVCKDGESKDFS 2007
Query: 422 YRKSLENFARVKHPDKADAFLAKYFSRKPSRPGWSRDHASTP--DDAGSQQEQ 270
YRK L N+ K+PD A++FL KYF RKP G D +TP D+A + EQ
Sbjct: 2008 YRKCLANYISKKYPDLAESFLGKYF-RKPRARG---DQTATPGRDEAATPGEQ 2056
>ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Gossypium raimondii]
Length = 1921
Score = 498 bits (1282), Expect = e-137
Identities = 341/916 (37%), Positives = 479/916 (52%), Gaps = 60/916 (6%)
Frame = -2
Query: 2858 AVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMV 2679
AVK GDAWR V+D CLPV +IDT+RSIPYAIKQV++LLGISCAFEQAV+RLSTSV MV
Sbjct: 1078 AVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISCAFEQAVQRLSTSVSMV 1137
Query: 2678 TKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAE 2499
T+GVLK+HL+LLANSMTC GNLIGFN GG K LSRSL++QVPFTEATL PRKCFERAAE
Sbjct: 1138 TRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFTEATLFTPRKCFERAAE 1197
Query: 2498 KCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSSG 2319
KC+ +SLSS+V SCSWGK VAVGTGS FD+L + + +Q +G++VY+FL +V G + G
Sbjct: 1198 KCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWNQESGS-DQMSGMDVYNFLHMVSG-AGG 1255
Query: 2318 DETNTACLGAEIENLDMEDEAMTFDLSPVRDSDQPTFEDRHEFENNLANPRSKESIQREL 2139
+NTACLG E+++L M++ ++ D S D+P FED EFENNL +
Sbjct: 1256 SNSNTACLGEEVDDL-MDEWCLSPDHS--TGLDKPVFEDAAEFENNL------DGQSASA 1306
Query: 2138 SWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSKMAKE-DSL 1962
+WE+D GW+ ++K A++ D
Sbjct: 1307 NWEKDVSLDKVSDVGWD-----------------------------ASGWNKNAEDVDKF 1337
Query: 1961 SFGEWNSKQPDSLKQSGSSSAWGKMVDNESDSSFAAEPRRSWEQSADKSGNVWTAKNVXX 1782
+ +S++ + G+S + ++V + D + A +W ++A+ N
Sbjct: 1338 AAAATSSEKQNEWSGWGASKSNSQVVSPKVDVGWDA--LSAWHKNAEDGDNF-------- 1387
Query: 1781 XXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKE-------PQSTG----EQSESSPAW-- 1641
A+ S+ + ++ +WG + P++ G EQ+E S W
Sbjct: 1388 -------------AAAASSSKKQSEWSDWGMSKSKSQDVSPKTDGTCMKEQTELS-GWEM 1433
Query: 1640 KKIDSLGNLPLTAKAS--GGWDQKFD---KDQKHAAQTTSLNSAWSSWNNCEPVKIDSFS 1476
KK D+ LP+ +AS GWD ++ S + WS W DS
Sbjct: 1434 KKFDTRDVLPVEERASKPNGWDSGASWGIMSKESEELDASAAAPWSGWGT-----KDSSP 1488
Query: 1475 KRVQEKSSCDGEWGEKS---QDTAKQSGSSF--------------AWEKKFEAGSASPLX 1347
K+ +K+S W S + TA S F W+ K A P+
Sbjct: 1489 KKSLDKTSKSSSWDTVSSWGRKTAAVHESGFIGNDNQPGQGRIENEWDNK--ASQVKPV- 1545
Query: 1346 XXXXXXXXXXGWELAIDKAQRLVCQATIMDSSWSSWGRGETNKEERLSNSGQEDASNDHK 1167
GW + + +V Q+T SSW + ++ S SG +S
Sbjct: 1546 ------QSASGWNNKV--TEEMVVQST------SSWDEKASWEKPVQSMSGWVSSS---- 1587
Query: 1166 WGAKESQSMGKQSGFSSGWGRKVSSNENKA-DENKDPARVATGNYSDWSKMNTDLVQGER 990
A +S K +S W ++ + N A D+ K PA S W + +
Sbjct: 1588 -AAGSDESPTKGCSKNSNWDQQKAQTMNNAWDQQKSPA-----TNSSWDRQKSSTANNSW 1641
Query: 989 SLATNAEEGSWRSGGAIGINIDGERSKSAG-TRAWENKKDAHSQRGPRKWFKGDGNESSR 813
SW + IN ++ KS ++ W D + W G ++++
Sbjct: 1642 DQQKPPANSSWDQEKSPTINNSWDQQKSPECSQGWGTLNDLNQPASSSGWDMPQGEDNTQ 1701
Query: 812 G-----WG-SPSNGDW---RNQRNRPAKAV----DNFSAGGTFTLTKQRLDSFTAEEQDI 672
WG S + W N+++RP K D+ S +T+T+QRLD FT+EE+DI
Sbjct: 1702 SEKQHQWGQSKGSRRWASDANKKSRPLKPARMMNDDSSMAAMYTVTRQRLDMFTSEEKDI 1761
Query: 671 LSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKELKIGAGIKYIMVSK 492
L D E +MQ+IR+I+HQTGYNDGDPLSADDQ++V+DNVL +HP+K +K+GAGI Y+MV+K
Sbjct: 1762 LLDVEPLMQSIRKIMHQTGYNDGDPLSADDQTFVLDNVLAHHPDKAVKMGAGIDYVMVNK 1821
Query: 491 HASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKHPDKADAFLAKYFSRK--------- 339
H+ F ++RC YVV+TD HKQDFSY K LEN + K+PD A+AF+AKYF +
Sbjct: 1822 HSLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGKYPDLAEAFVAKYFRKSRGNRERGVA 1881
Query: 338 PSRPGWSRDHASTPDD 291
P +RD + T DD
Sbjct: 1882 PENSQGNRDQSVTQDD 1897
>gb|KHG00588.1| DNA-directed RNA polymerase E subunit 1 -like protein [Gossypium
arboreum]
Length = 1996
Score = 496 bits (1276), Expect = e-137
Identities = 351/940 (37%), Positives = 486/940 (51%), Gaps = 84/940 (8%)
Frame = -2
Query: 2858 AVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMV 2679
AVK GDAWR V+D CLPV +IDT+RSIPYAIKQV++LLGISCAFEQAV+RLSTSV MV
Sbjct: 1078 AVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISCAFEQAVQRLSTSVSMV 1137
Query: 2678 TKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAE 2499
T+GVLK+HL+LLANSMTC GNLIGFN GG KALSRSL++QVPFTEATL PRKCFERAAE
Sbjct: 1138 TRGVLKEHLMLLANSMTCCGNLIGFNSGGYKALSRSLNIQVPFTEATLFTPRKCFERAAE 1197
Query: 2498 KCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVEL--------------------- 2382
KC+ +SLSS+V SCSWGK VAVGTGS FD+L + +++E+
Sbjct: 1198 KCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWN-QELEISESTKLDQVAALTRISFFSSI 1256
Query: 2381 ------NQQAGINVYDFLQLVRGSSSGDETNTACLGAEIENLDMEDEAMTFDLSPVRDSD 2220
+Q +G++VY+FL +V G + G +NTACLG E+++L M++ ++ D S D
Sbjct: 1257 PFQSGSDQMSGMDVYNFLHMVSG-AGGSNSNTACLGEEVDDL-MDEWCLSPDHS--TGLD 1312
Query: 2219 QPTFEDRHEFENNLANPRSKESIQRELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXX 2040
+P FED EFENNL + + ++++S ++ S + S GW
Sbjct: 1313 KPVFEDAAEFENNLDGQSASANWEKDVSLDKVSDVGWDAS-GWNKNVEDVDKFAAAATSS 1371
Query: 2039 XXXXXXXXXAVDKEDNFSKMAKEDS--LSFGEWNSKQPDSLKQSGSSSAWGKMVDNESDS 1866
V K ++ K D + WN D K + ++++ K NE S
Sbjct: 1372 EKQNEWSGWGVSKSNSQVVSPKVDVGWDALSGWNKNAEDGDKFAAAATSSKK--KNEC-S 1428
Query: 1865 SFAAEPRRSWEQSADKSGNVWTAKNVXXXXXXXXXXSPVDKEASFSNRVQSPKYGEWGAK 1686
+ A +S + + K W A + A+ S++ QS ++ +WG
Sbjct: 1429 DWGASKSKSQDVVSPKVDVGWDALSAWNKNAEDGDNFAA---AASSSKKQS-EWSDWGMS 1484
Query: 1685 EPQSTG-----------EQSESSPAW--KKIDSLGNLPLTAKAS--GGWDQKFD---KDQ 1560
+ +S EQ+E S W KK D+ LP+ AS GWD +
Sbjct: 1485 KSKSQDVSSKTDGTCMKEQTELS-GWGMKKFDTRDVLPVEEGASKPNGWDSGASWGIMSK 1543
Query: 1559 KHAAQTTSLNSAWSSWNNCEPVKIDSFSKRVQEKSSCD--GEWGEK-----------SQD 1419
+ S + WS W + S + + SS D WG+K + +
Sbjct: 1544 ESEELDASAAAPWSGWGTKDSTPKKSLDE-TSKSSSWDTVSSWGKKIAAVHESGFTGNDN 1602
Query: 1418 TAKQSGSSFAWEKKFEAGSASPLXXXXXXXXXXXGWELAIDKAQRLVCQATIMDSSWSSW 1239
Q W+ K A P+ GW + + V Q+T SSW
Sbjct: 1603 QPDQGRIENEWDNK--ASHVKPV-------QSASGWNNKV--TEEKVVQST------SSW 1645
Query: 1238 GRGETNKEERLSNSGQEDASNDHKWGAKESQSMGKQSGFSSGWGRKVSSNENKA-DENKD 1062
+ ++ S SG +S G+ ES + G +S W ++ S N A D+ K
Sbjct: 1646 DEKASWEKPVQSMSGWVSSS---VAGSDESPTKGWSK--NSAWDQQKSQTMNNAWDQQKS 1700
Query: 1061 PARVATGNYSDWSKMNTDLVQGERSLATNAEEGSWRSGGAIGINIDGERSKSAG-TRAWE 885
PA S W + + SW + +N ++ KS ++ W
Sbjct: 1701 PA-----TNSSWDRQKSSTANNSWDQQKPPANSSWDQEKSPTMNNSWDQQKSPECSQGWG 1755
Query: 884 NKKDAHSQRGPRKWFKGDG-----NESSRGWG-SPSNGDW---RNQRNRPAKAV----DN 744
D + W G NE WG S + W N++NRP K D+
Sbjct: 1756 TLNDLNQPASSSGWDMPQGEDNTQNEKQHQWGQSKGSRRWASDANKKNRPVKPARMMNDD 1815
Query: 743 FSAGGTFTLTKQRLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVD 564
S +T+T+QRLD FT+EE+DILSD E +MQ+IR+I+HQTGYNDGDPLSADDQ++V+D
Sbjct: 1816 SSMAAMYTVTRQRLDMFTSEEKDILSDVEPLMQSIRKIMHQTGYNDGDPLSADDQTFVLD 1875
Query: 563 NVLNYHPEKELKIGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKH 384
NVL +HP+K +K+GAGI Y+MV+KH+ F ++RC YVV+TD HKQDFSY K LEN + K+
Sbjct: 1876 NVLAHHPDKAVKMGAGIDYVMVNKHSLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGKY 1935
Query: 383 PDKADAFLAKYFSRK---------PSRPGWSRDHASTPDD 291
PD A+AF+AKYF + P +RD + T DD
Sbjct: 1936 PDLAEAFVAKYFRKSRGNRERGVAPENSQGNRDQSVTQDD 1975
>ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella]
gi|482562261|gb|EOA26451.1| hypothetical protein
CARUB_v10022497mg [Capsella rubella]
Length = 1959
Score = 492 bits (1266), Expect = e-136
Identities = 333/889 (37%), Positives = 480/889 (53%), Gaps = 29/889 (3%)
Frame = -2
Query: 2858 AVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMV 2679
AVK +GDAWR+V+D+CL V LIDT RSIPY+IKQVQELLG+SCAFEQAV+RLS SV MV
Sbjct: 1080 AVKQSGDAWRVVIDSCLSVLHLIDTKRSIPYSIKQVQELLGLSCAFEQAVQRLSASVKMV 1139
Query: 2678 TKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAE 2499
+KGVLK+H++LLAN+MTC+GN++GFN GG KAL+RSL+++ PFTEATL PRKCFE+AAE
Sbjct: 1140 SKGVLKEHIILLANNMTCSGNMLGFNSGGYKALTRSLNIKAPFTEATLITPRKCFEKAAE 1199
Query: 2498 KCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSSG 2319
KCH +SLS+VVGSCSWGK V VGTGS F++L + K+ L+ + +VY FLQ+VR ++S
Sbjct: 1200 KCHTDSLSTVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDKEETDVYSFLQMVRSTTSS 1259
Query: 2318 DETNTACLGAEIENLDMEDEAMTFDLSPVRDS--DQPTFEDRHEFENNLANPRSKESIQR 2145
D + G ++ E+E + SP RDS +P FED EF+N + Q
Sbjct: 1260 D-AFVSSPGFDV----TEEEMAEWAESPERDSALGEPKFEDSAEFQN-----LHDDGKQS 1309
Query: 2144 ELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSK---MAK 1974
E +WE+ S SGG E + E N+ K + K
Sbjct: 1310 ESNWEKSSSWDNGCSGGSEWGVSKSTGGES----------------NTESNWEKTTSVEK 1353
Query: 1973 EDSLSFGEWNSKQ-PDSLKQSGSSSAWG-KMVDNESDSSFAAEPRRSWEQSA-----DKS 1815
ED+ S WN+K+ +S S AWG K D++++++ E R + S + +
Sbjct: 1354 EDAWS--GWNTKKDAQESSKSDSGGAWGIKTKDDDANTTPNWETRPAQMDSIVPEINEPT 1411
Query: 1814 GNVWTAKNVXXXXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKEPQSTGEQSESSPAWKK 1635
+VW K+V A++ S WG+ +++ +S+++ AW
Sbjct: 1412 SDVWGLKSVSEKPWNKKNWGTESAPAAWG----STDADAWGSSNKKNSETESDAA-AWGS 1466
Query: 1634 IDSL-GNLPLTAKASGGWDQKFDKDQKHAA------QTTSLNSAWSSW--NNCEPVKIDS 1482
D ++ A G W++K + + AA +T S + WS W NN EP DS
Sbjct: 1467 RDKRNSDIGSGAGVLGPWNKKSSETESDAAAWGSSGKTKSDAATWSPWDKNNMEP---DS 1523
Query: 1481 FSKRVQEKSSCDGEWGEKSQDTAKQSGSSFAWEKKFEAGSASPLXXXXXXXXXXXGWELA 1302
E + + KS+ + +G+S+ K ++G+A+ W +
Sbjct: 1524 ------EPAGWGSQGNMKSETETESNGASWGSSGKTKSGAAA--------------WG-S 1562
Query: 1301 IDKAQRLVCQATIMDSSWSSWGRGETNKEERLSNSGQEDASNDHKWGAKESQSMGKQSGF 1122
DK + S+W S G+ + E S WGA + + +SG
Sbjct: 1563 CDKNN---METNSEPSAWGSQGKKKAETE-----------SGPASWGAWDKKISETESGL 1608
Query: 1121 SSGWGRKVSSNENKADENKDPARVATGNYSDWSKMNTDLVQGERSLATNAEEGS-WRSGG 945
+GWG N +K + + A G++ S D TN ++G+ W S
Sbjct: 1609 -AGWG-----NGDKINSETESGAAAWGSWGQPSPTAAD-------KDTNEDDGNPWVSLK 1655
Query: 944 AIGINIDGERSKSAGTRAWENKKDAHSQRGPRKWFKGDGNESSRGWGSPSNGDWRNQRN- 768
E+ KS W N P K F DG S GW + +WR +RN
Sbjct: 1656 ETKSGEKDEKEKS----QWGN---------PAKKFPSDG--SYGGWSNGGGAEWRGKRNH 1700
Query: 767 --RPAKAVDNFSAGGTFTLTKQRLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPL 594
RP ++ DN + FT TKQRLDSFT+EEQ++LSD E +M+ +R+I+H +GY DG+P+
Sbjct: 1701 TPRPPRSEDNLAP--MFTATKQRLDSFTSEEQELLSDVEPVMRTLRKIMHMSGYPDGEPI 1758
Query: 593 SADDQSYVVDNVLNYHPEKELKIGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRK 414
S DD+++V++ +LN+HPEKE K+G+ + +I V KH +F ++RCF+VVSTD KQDFSYRK
Sbjct: 1759 SDDDKTFVLEKILNFHPEKERKLGSAVDFITVDKHTTFTDTRCFFVVSTDGAKQDFSYRK 1818
Query: 413 SLENFARVKHPDKADAFLAKYFSRKPSRPGWSRDH----ASTPDDAGSQ 279
SL N+ K+PD+A+ F+ KYF K RP +RD A+ P + SQ
Sbjct: 1819 SLNNYLMTKYPDRAEEFIDKYF--KKPRPSGNRDRNNQDATPPGEEQSQ 1865
>gb|KRH20723.1| hypothetical protein GLYMA_13G196900 [Glycine max]
Length = 2020
Score = 491 bits (1264), Expect = e-135
Identities = 337/988 (34%), Positives = 487/988 (49%), Gaps = 125/988 (12%)
Frame = -2
Query: 2861 DAVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMM 2682
+AVK +GDAWRIV+D+CLPV LIDT RSIPYAIKQ+QELLGISC F+QA++R++ SV M
Sbjct: 1079 EAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKM 1138
Query: 2681 VTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAA 2502
V KGVL++HL+LLA+SMTC GNL+GFN GG KALSR L++QVPFT+ATL P+KCFERAA
Sbjct: 1139 VAKGVLREHLILLASSMTCGGNLVGFNTGGYKALSRQLNIQVPFTDATLFTPKKCFERAA 1198
Query: 2501 EKCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSS 2322
EKCH +SLSS+V SCSWGKHVAVGTGS FDI+ D+ +++ N+ G++VY FL +V+ ++
Sbjct: 1199 EKCHTDSLSSIVASCSWGKHVAVGTGSKFDIVWDSSEIKSNEIEGMDVYSFLHMVKSVTN 1258
Query: 2321 GDETNTACLGAEIENLDMEDEAMTFDLSPVRDSD-QPTFEDRHEFENNLANPRSKESIQR 2145
G+E ACLG +I++L +E+E M +SP +S + FE+ E N +
Sbjct: 1259 GEEETDACLGEDIDDL-LEEEYMDLGMSPQHNSGFEAVFEENPEVLNGSTSN-------- 1309
Query: 2144 ELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSK-MAKED 1968
W+ S QT + W +E+++ K + +ED
Sbjct: 1310 --GWDVSSNQTQSKTNEWS--------------GWASSNKDGRSETAQENSWGKTVNQED 1353
Query: 1967 SLSFGEWN-SKQPDSLK-QSGSSSAWG-----------KMVDNESDSSFAAEPRRSWEQS 1827
S WN S D K +S S WG K V +S S A + Q+
Sbjct: 1354 SSKSNAWNTSTTADQTKTKSNEWSDWGSNKSEIPAGGSKAVQEDSSKSNAWNTSTTSNQT 1413
Query: 1826 ADKSGNVWTAKNVXXXXXXXXXXSPVDKEASFSN-----------RVQSPKYGEWGAKEP 1680
KS W+A V +++S SN + +S ++ WG+ +
Sbjct: 1414 KTKS-KEWSAWGSNKSEIPACGSKAVQEDSSKSNTWNTSTTADQTKTKSNEWSAWGSNKS 1472
Query: 1679 Q-------STGEQSESSPAWKKIDSLGNLPLTAKASGGWDQ-------------KFDKDQ 1560
+ + E S S AW ++ + W+ + D +
Sbjct: 1473 EIPAGGSKAVQEDSSKSNAWNTSTTVDQTKTKSNEWSAWESNKSEIPAGGSKAVQEDSSK 1532
Query: 1559 KH-------AAQTTSLNSAWSSWNNCEPVKIDSFSKRVQEKSSCDGEWGEKSQDTAKQSG 1401
+ A QT + ++ WS+W + + SK VQE SS + T +S
Sbjct: 1533 SNAWNRSTTADQTKTKSNEWSAWGSNKSEIPAGGSKAVQEDSSKAWNTSTTADQTKTKSN 1592
Query: 1400 SSFAWEKKFEAGSASPL---XXXXXXXXXXXGWELAI---DKAQRLVCQATIMD----SS 1251
W + S P W+ + D ++ A D +
Sbjct: 1593 E---WSARVSNKSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLGAWDANAADQTKSNE 1649
Query: 1250 WSSWG-RGETNKEERLSNS----------GQEDASNDHKWGAKESQSMGKQSGFSSGWGR 1104
WS WG + + +E+ + +S QED S WGA + +S S WG+
Sbjct: 1650 WSGWGKKKDVTQEDNVQHSWGSGKRKDKVTQEDNSGSGDWGANRTDLAITKSSEWSSWGK 1709
Query: 1103 KVSS-------------------NENKADENKDPARVATGNYSDWSKMNTDLVQG--ERS 987
+ N+ + D N + S W + + + G E+
Sbjct: 1710 NKTEIPAGGSANVQNDSWGLGKLNDTQKD-NSGCGAWGENSGSAWVRNKAETIDGGSEKP 1768
Query: 986 LATNAEEGSWRSGGAIGINIDGERSKSAGTRAWENKKDAHSQRGPRKW------------ 843
G+W++ +G N + KS+ + AW++ ++ + W
Sbjct: 1769 QEDAWNSGNWKAESKVG-NTTWGKPKSSESHAWDSHNQSNQNSSSQGWESHIASANSENE 1827
Query: 842 -----------FKGDGNESSRGWGSPSNGDWRNQRNRPAKAVDNFSAGGTFTLTKQRLDS 696
FK + E S+G GS + GDW+N RNRP +A QRLD
Sbjct: 1828 KGFQWGKGRDSFKKNRFEGSQGRGS-NAGDWKN-RNRPPRA------------PGQRLDI 1873
Query: 695 FTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKELKIGAG 516
+++EEQD+L D E +MQ+IRRI+ Q GY+DGDPL+A+DQ +V++NV +HP+KE K+GAG
Sbjct: 1874 YSSEEQDVLKDIEPIMQSIRRIMQQQGYSDGDPLAAEDQLFVLENVFEHHPDKETKMGAG 1933
Query: 515 IKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKHPDKADAFLAKYFSRKP 336
I Y+MV+KH+SFQESRCFYVV D +DFSYRK L N+ K+PD A++FL KYF RKP
Sbjct: 1934 IDYVMVNKHSSFQESRCFYVVCKDGQSKDFSYRKCLANYISKKYPDLAESFLGKYF-RKP 1992
Query: 335 SRPG-----WSRDHASTP--DDAGSQQE 273
G D +TP D+A + E
Sbjct: 1993 RARGDQTATLGGDQTATPAQDEAATSGE 2020
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2020
Score = 490 bits (1262), Expect = e-135
Identities = 337/988 (34%), Positives = 485/988 (49%), Gaps = 125/988 (12%)
Frame = -2
Query: 2861 DAVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMM 2682
+AVK +GDAWRIV+D+CLPV LIDT RSIPYAIKQ+QELLGISC F+QA++R++ SV M
Sbjct: 1079 EAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKM 1138
Query: 2681 VTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAA 2502
V KGVL++HL+LLA+SMTC GNL+GFN GG KALSR L++QVPFT+ATL P+KCFERAA
Sbjct: 1139 VAKGVLREHLILLASSMTCGGNLVGFNTGGYKALSRQLNIQVPFTDATLFTPKKCFERAA 1198
Query: 2501 EKCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSS 2322
EKCH +SLSS+V SCSWGKHVAVGTGS FDI+ D+ +++ N+ G++VY FL +V+ ++
Sbjct: 1199 EKCHTDSLSSIVASCSWGKHVAVGTGSKFDIVWDSSEIKSNEIEGMDVYSFLHMVKSVTN 1258
Query: 2321 GDETNTACLGAEIENLDMEDEAMTFDLSPVRDSD-QPTFEDRHEFENNLANPRSKESIQR 2145
G+E ACLG +I++L +E+E M +SP +S + FE+ E N +
Sbjct: 1259 GEEETDACLGEDIDDL-LEEEYMDLGMSPQHNSGFEAVFEENPEVLNGSTSN-------- 1309
Query: 2144 ELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSK-MAKED 1968
W+ S QT + W +E+++ K + +ED
Sbjct: 1310 --GWDVSSNQTQSKTNEWS--------------GWASSNKDGRSETAQENSWGKTVNQED 1353
Query: 1967 SLSFGEWN-SKQPDSLK-QSGSSSAWG-----------KMVDNESDSSFAAEPRRSWEQS 1827
S WN S D K +S S WG K V +S S A + Q+
Sbjct: 1354 SSKSNAWNTSTTADQTKTKSNEWSDWGSNKSEIPAGGSKAVQEDSSKSNAWNTSTTSNQT 1413
Query: 1826 ADKSGNVWTAKNVXXXXXXXXXXSPVDKEASFSN-----------RVQSPKYGEWGAKEP 1680
KS W+A V +++S SN + +S ++ WG+ +
Sbjct: 1414 KTKS-KEWSAWGSNKSEIPACGSKAVQEDSSKSNTWNTSTTADQTKTKSNEWSAWGSNKS 1472
Query: 1679 Q-------STGEQSESSPAWKKIDSLGNLPLTAKASGGW-----------DQKFDKDQKH 1554
+ + E S S AW + + + W + +D
Sbjct: 1473 EIPAGGSKAVQEDSSKSNAWNRSTTADQTKTKSNEWSAWGSNKSEIPAGGSKAVQEDSSK 1532
Query: 1553 ---------AAQTTSLNSAWSSWNNCEPVKIDSFSKRVQEKSSCDGEWGEKSQDTAKQSG 1401
A QT + ++ WS+W + + SK VQE SS + T +S
Sbjct: 1533 SNAWNTSTTADQTKTKSNEWSAWGSNKSEIPAGGSKAVQEDSSKAWNTSTTADQTKTKSN 1592
Query: 1400 SSFAWEKKFEAGSASPL---XXXXXXXXXXXGWELAI---DKAQRLVCQATIMD----SS 1251
W + S P W+ + D ++ A D +
Sbjct: 1593 E---WSARVSNKSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLGAWDANAADQTKSNE 1649
Query: 1250 WSSWG-RGETNKEERLSNS----------GQEDASNDHKWGAKESQSMGKQSGFSSGWGR 1104
WS WG + + +E+ + +S QED S WGA + +S S WG+
Sbjct: 1650 WSGWGKKKDVTQEDNVQHSWGSGKRKDKVTQEDNSGSGDWGANRTDLAITKSSEWSSWGK 1709
Query: 1103 KVSS-------------------NENKADENKDPARVATGNYSDWSKMNTDLVQG--ERS 987
+ N+ + D N + S W + + + G E+
Sbjct: 1710 NKTEIPAGGSANVQNDSWGLGKLNDTQKD-NSGCGAWGENSGSAWVRNKAETIDGGSEKP 1768
Query: 986 LATNAEEGSWRSGGAIGINIDGERSKSAGTRAWENKKDAHSQRGPRKW------------ 843
G+W++ +G N + KS+ + AW++ ++ + W
Sbjct: 1769 QEDAWNSGNWKAESKVG-NTTWGKPKSSESHAWDSHNQSNQNSSSQGWESHIASANSENE 1827
Query: 842 -----------FKGDGNESSRGWGSPSNGDWRNQRNRPAKAVDNFSAGGTFTLTKQRLDS 696
FK + E S+G GS + GDW+N RNRP +A QRLD
Sbjct: 1828 KGFQWGKGRDSFKKNRFEGSQGRGS-NAGDWKN-RNRPPRA------------PGQRLDI 1873
Query: 695 FTAEEQDILSDFEQMMQNIRRIIHQTGYNDGDPLSADDQSYVVDNVLNYHPEKELKIGAG 516
+++EEQD+L D E +MQ+IRRI+ Q GY+DGDPL+A+DQ +V++NV +HP+KE K+GAG
Sbjct: 1874 YSSEEQDVLKDIEPIMQSIRRIMQQQGYSDGDPLAAEDQLFVLENVFEHHPDKETKMGAG 1933
Query: 515 IKYIMVSKHASFQESRCFYVVSTDDHKQDFSYRKSLENFARVKHPDKADAFLAKYFSRKP 336
I Y+MV+KH+SFQESRCFYVV D +DFSYRK L N+ K+PD A++FL KYF RKP
Sbjct: 1934 IDYVMVNKHSSFQESRCFYVVCKDGQSKDFSYRKCLANYISKKYPDLAESFLGKYF-RKP 1992
Query: 335 SRPG-----WSRDHASTP--DDAGSQQE 273
G D +TP D+A + E
Sbjct: 1993 RARGDQTATLGGDQTATPAQDEAATSGE 2020
>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi|297325678|gb|EFH56098.1|
NRPD1b [Arabidopsis lyrata subsp. lyrata]
Length = 1947
Score = 486 bits (1252), Expect = e-134
Identities = 325/892 (36%), Positives = 482/892 (54%), Gaps = 32/892 (3%)
Frame = -2
Query: 2858 AVKLTGDAWRIVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLSTSVMMV 2679
AVK +GDAWR+V+DACL V LIDT RSIPY+IKQVQELLG+SCAFEQAV+RLS SV MV
Sbjct: 1080 AVKQSGDAWRVVIDACLSVLHLIDTKRSIPYSIKQVQELLGLSCAFEQAVQRLSASVRMV 1139
Query: 2678 TKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCFERAAE 2499
+KGVLK+H++LLAN+MTC+GN++GFN GG KAL+RSL+++ PFTEATL PR+CFE+AAE
Sbjct: 1140 SKGVLKEHIILLANNMTCSGNMLGFNSGGYKALTRSLNIKAPFTEATLITPRRCFEKAAE 1199
Query: 2498 KCHVESLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQQAGINVYDFLQLVRGSSSG 2319
KCH +SLS+VVGSCSWGK V VGTGS F++L + K+ L+ + +VY FLQ+VR +++
Sbjct: 1200 KCHTDSLSTVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDKEETDVYSFLQMVRSTTNA 1259
Query: 2318 DETNTACLGAEIENLDMEDEAMTFDLSPVRDS--DQPTFEDRHEFENNLANPRSKESIQR 2145
D + G ++ E+E + SP RDS +P FED EF+N + ES
Sbjct: 1260 D-AYVSSPGFDV----TEEEMAEWAESPERDSALGEPKFEDSAEFQNLHDEGKPSES--- 1311
Query: 2144 ELSWERDSPQTAELSGGWEXXXXXXXXXXXXXXXXXXXXXXXXXAVDKEDNFSK---MAK 1974
+WE+ S SGG E + E N+ K + K
Sbjct: 1312 --NWEKSSSWDNGCSGGSE----------------WGVSKNTGGEANPESNWEKTTNVEK 1353
Query: 1973 EDSLSFGEWNSKQ-PDSLKQSGSSSAWG-KMVDNESDSSFAAEPRRSWEQSA-----DKS 1815
ED+ S WN+K+ +S S AWG K D+++D++ E R + S + +
Sbjct: 1354 EDAWS--SWNTKKDAQESSKSDSGVAWGLKTKDDDADTTPNWETRPAQTDSIVPENNEPT 1411
Query: 1814 GNVWTAKNVXXXXXXXXXXSPVDKEASFSNRVQSPKYGEWGAKEPQSTGEQSESSPAW-- 1641
+VW K+ A++ S WG+ + +++ +S+++ AW
Sbjct: 1412 SDVWGHKSGSDKSWDKKNGGTESAPAAWG----STDAAVWGSSDKKNSETESDAA-AWGS 1466
Query: 1640 --KKIDSLGNLPLTAKASGGWDQKFDKDQKHAA------QTTSLNSAWSSWNNCEPVKID 1485
KK +G+ A G W++K K + A +T S +AWSSW+
Sbjct: 1467 RDKKNSEVGS---GAGVLGPWNKKSSKTESDGATWGSSDKTKSGAAAWSSWD-------- 1515
Query: 1484 SFSKRVQEKSSCDGEWGEKSQDTAK-QSGSSF--AWEKKFEAGSASPLXXXXXXXXXXXG 1314
K+ E S WG +S++ + +SG S AW+ K + P G
Sbjct: 1516 ---KKNMETDSEPAAWGSQSKNKPETESGPSTWGAWDTKKSETESGP-----------AG 1561
Query: 1313 WELAIDKAQRLVCQATIMDSSWSSWGRGETNKEERLSNSGQEDASNDHKWGAKESQSMGK 1134
W + +DK + ++ +W + ++N E + G DA+ WG + +
Sbjct: 1562 WGI-VDKKN---SETESGPAAMGNWDKKKSNTESGPAAWGSTDAA---VWGFSDKNNSET 1614
Query: 1133 QSGFSSGWGRKVSSNENKADENKDPARVATGNYSDWSKMNTDLVQGERSLATNAEEGSWR 954
+S ++ WG S + K E + A + W A +E W
Sbjct: 1615 ESD-AAAWG----SRDKKTSETESGA-------AAWGSWGQPTPTAANEDANEDDENPW- 1661
Query: 953 SGGAIGINIDGERSKSAGTRAWENKKDAHSQRGPRKWFKGDGNESSRGWGSPSNGDWRNQ 774
+++ +S+ ++ K+ P K F SS GW + DW+ +
Sbjct: 1662 ------VSLKETKSRD------KDDKERIQWGNPAKKF-----PSSGGWSNGGGADWKGK 1704
Query: 773 RN---RPAKAVDNFSAGGTFTLTKQRLDSFTAEEQDILSDFEQMMQNIRRIIHQTGYNDG 603
RN RP ++ DN + FT T+QRLDSFT+EEQ++LSD E +M+ +R+I+H + Y DG
Sbjct: 1705 RNHTPRPPRSEDNLAP--MFTATRQRLDSFTSEEQELLSDVEPVMRTLRKIMHPSAYPDG 1762
Query: 602 DPLSADDQSYVVDNVLNYHPEKELKIGAGIKYIMVSKHASFQESRCFYVVSTDDHKQDFS 423
DP+S DD+++V++ +LN+HP+KE K+G+G+ +I V KH F +SRCF+VVSTD KQDFS
Sbjct: 1763 DPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFS 1822
Query: 422 YRKSLENFARVKHPDKADAFLAKYFSRKPSRPGWSRDH----ASTPDDAGSQ 279
YRKSL N+ +K+PD+A+ F+ KYF++ RP +RD A+ P + SQ
Sbjct: 1823 YRKSLNNYLMMKYPDRAEEFIDKYFTK--PRPSGNRDRNNQDATPPGEEQSQ 1872