BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00009465
         (3944 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III s...  1989   0.0  
ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III s...  1949   0.0  
ref|XP_009604369.1| PREDICTED: DNA-directed RNA polymerase III s...  1949   0.0  
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1936   0.0  
ref|XP_010312066.1| PREDICTED: DNA-directed RNA polymerase III s...  1922   0.0  
ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III s...  1905   0.0  
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...  1870   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1859   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1857   0.0  
ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III s...  1857   0.0  
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...  1856   0.0  
ref|XP_012849950.1| PREDICTED: DNA-directed RNA polymerase III s...  1853   0.0  
ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III s...  1852   0.0  
ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III s...  1834   0.0  
ref|XP_004141655.2| PREDICTED: DNA-directed RNA polymerase III s...  1833   0.0  
ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III s...  1829   0.0  
ref|XP_008462447.1| PREDICTED: DNA-directed RNA polymerase III s...  1828   0.0  
ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III s...  1825   0.0  
gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium r...  1824   0.0  
ref|XP_012068721.1| PREDICTED: DNA-directed RNA polymerase III s...  1821   0.0  

>ref|XP_011085923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Sesamum
            indicum]
          Length = 1152

 Score = 1989 bits (5152), Expect = 0.0
 Identities = 985/1135 (86%), Positives = 1048/1135 (92%), Gaps = 1/1135 (0%)
 Frame = -1

Query: 3767 GIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSK 3588
            GIDKQ LAAPVK+AVDKFQLLPEFLKVRGLVKQHLDSFNYFVRT+IKKIV AN+ I +SK
Sbjct: 19   GIDKQALAAPVKNAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLI-TSK 77

Query: 3587 KDENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTSV 3408
             D ++YLRYKDVRIGEPS++ID VTEKL+PHKCRLSD+TYAAPI V IEY TGS  + + 
Sbjct: 78   IDPSIYLRYKDVRIGEPSVIIDGVTEKLTPHKCRLSDITYAAPIYVNIEYITGSHGSKTT 137

Query: 3407 QMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLS 3228
            QMK+DV+IGRMPIMLRSCCC+LYGKDEEELAR GECPLDPGGYFVIKGTEKVILIQEQLS
Sbjct: 138  QMKRDVIIGRMPIMLRSCCCILYGKDEEELARYGECPLDPGGYFVIKGTEKVILIQEQLS 197

Query: 3227 KNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGM 3048
            KNRIIIDTDKKGCVQ              VI+MEKEKIYLYLNQF SKVPIMVV+KAMGM
Sbjct: 198  KNRIIIDTDKKGCVQASVTSSTEMTKSKTVIRMEKEKIYLYLNQFTSKVPIMVVLKAMGM 257

Query: 3047 ESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPY-APVEKR 2871
            ESDQEVVQM+GRDPRYS LLLPSIE+C K  V+TQHQALE+LE++VK+LPY   A  E R
Sbjct: 258  ESDQEVVQMIGRDPRYSELLLPSIEDCVKEAVHTQHQALEFLEQKVKKLPYSTPADKEGR 317

Query: 2870 ALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXXXX 2691
            AL ILRDIF+ANIPVRQ NFR KCIYVAVM+RR++EAILNKDAMDDKDYVGNKR      
Sbjct: 318  ALGILRDIFLANIPVRQNNFRPKCIYVAVMVRRILEAILNKDAMDDKDYVGNKRLELSGQ 377

Query: 2690 XXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGNWDV 2511
                     FKTMNDE RK +D  L+K SRSS FD+SQ++VKDSITVGLERTLSTGNWDV
Sbjct: 378  LLSLLFEDLFKTMNDEARKTIDTILAKPSRSSRFDISQFIVKDSITVGLERTLSTGNWDV 437

Query: 2510 KRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2331
            KRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 438  KRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 497

Query: 2330 GEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGLIL 2151
            GEACGL+KNLALMTHVTTD++EGP+ISLCYSLGVEDLELLSGEELHMPNS+LIILNGLIL
Sbjct: 498  GEACGLVKNLALMTHVTTDDDEGPLISLCYSLGVEDLELLSGEELHMPNSYLIILNGLIL 557

Query: 2150 GKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVSRI 1971
            GKHRRPQ FA AMRKLRR+GKIGEFVSIFVNEKQH VYIASDGGRVCRPLVIADKGVSRI
Sbjct: 558  GKHRRPQRFAKAMRKLRRSGKIGEFVSIFVNEKQHSVYIASDGGRVCRPLVIADKGVSRI 617

Query: 1970 KEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTILG 1791
            KEHHMKELKDGVR FDSFL+EGLIEYLDVNEENNALIALYE  A   +THIEIEPFTILG
Sbjct: 618  KEHHMKELKDGVRNFDSFLKEGLIEYLDVNEENNALIALYEENANERTTHIEIEPFTILG 677

Query: 1790 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRTIE 1611
            + AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRTIE
Sbjct: 678  IIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRTIE 737

Query: 1610 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYENGT 1431
            LV +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KKM+A+ QKYENGT
Sbjct: 738  LVRFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKMTAVSQKYENGT 797

Query: 1430 SDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGLPDS 1251
            SDRI+RP RE Y+ E+ QILDDDGLAAPGEIIRP  IYINK+SPIVTRGP+TSPMGLPDS
Sbjct: 798  SDRILRPPREGYEAERMQILDDDGLAAPGEIIRPHDIYINKESPIVTRGPVTSPMGLPDS 857

Query: 1250 AYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQKGVC 1071
            AYKPS QTYKGP+GET V+DRVALCSD+NNNLC+KFM+RHTRRPE+GDKFSSRHGQKGVC
Sbjct: 858  AYKPSRQTYKGPDGETPVVDRVALCSDRNNNLCIKFMIRHTRRPELGDKFSSRHGQKGVC 917

Query: 1070 GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGEP 891
            G I+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRFHYGSAFGEP
Sbjct: 918  GNIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP 977

Query: 890  SGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKMHA 711
            SGHADKVEAISETLVKHGFSYNGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHA
Sbjct: 978  SGHADKVEAISETLVKHGFSYNGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHA 1037

Query: 710  RGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRK 531
            RGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRK
Sbjct: 1038 RGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRK 1097

Query: 530  CGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            CGLLGYYN+KLKTG+CSTCKNGENISTMKLPYACKLLIQELQ+MNI+PRL+LTEA
Sbjct: 1098 CGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLIQELQAMNIIPRLKLTEA 1152


>ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris] gi|698523320|ref|XP_009758466.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris]
          Length = 1155

 Score = 1949 bits (5049), Expect = 0.0
 Identities = 967/1138 (84%), Positives = 1031/1138 (90%), Gaps = 4/1138 (0%)
 Frame = -1

Query: 3767 GIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSK 3588
            GIDKQ+LA+P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV+TEIKKIV AN EIRS  
Sbjct: 19   GIDKQYLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVKTEIKKIVQANKEIRSIL 78

Query: 3587 KDENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTSV 3408
             D N+YL+Y DV IGEPS+M+D VTEKL+P KCRL D+TYAAPI V IEYTTGS    SV
Sbjct: 79   -DPNIYLKYNDVHIGEPSIMVDGVTEKLNPQKCRLCDITYAAPIYVDIEYTTGSHGQISV 137

Query: 3407 QMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLS 3228
            Q KK+V IGRMP+MLRSCCCVLYGKDEEELA+LGECPLDPGGYFVIKGTEKVILIQEQLS
Sbjct: 138  QTKKNVTIGRMPVMLRSCCCVLYGKDEEELAKLGECPLDPGGYFVIKGTEKVILIQEQLS 197

Query: 3227 KNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGM 3048
            KNRIIIDTDKKGCVQ              ++KMEKEK+YL LN FK+KVPIM+VMKAMGM
Sbjct: 198  KNRIIIDTDKKGCVQASVTSSTEKTKSKTIVKMEKEKVYLELNMFKTKVPIMIVMKAMGM 257

Query: 3047 ESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLE--KQVKQLPYPYAPVEK 2874
            ESDQEVVQM+GRDPR+SALLLPSIEECA   VYTQ QALE+LE  K +K   Y   PVEK
Sbjct: 258  ESDQEVVQMIGRDPRFSALLLPSIEECADLKVYTQQQALEFLESDKMLKMFSYSAGPVEK 317

Query: 2873 --RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXX 2700
              RALSILRDIF+AN+PV ++NFR KCIYVAVM+RRMMEAILNKDAMDDKDYVGNKR   
Sbjct: 318  GARALSILRDIFLANVPVHKHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRLEL 377

Query: 2699 XXXXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGN 2520
                        FKTMNDE RK VDA L++ SRSS  D+S Y+ KDSITVG+ERTLSTGN
Sbjct: 378  SGQLLSLLFEDLFKTMNDEARKTVDALLARPSRSSRLDISPYIAKDSITVGMERTLSTGN 437

Query: 2519 WDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 2340
            WDVKRFRMHRKGMTQVVARLSYIG+LGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD
Sbjct: 438  WDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 497

Query: 2339 TPEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNG 2160
            TPEGEACGL+KNLALMTHVTTDE+E PIISLCY LGVEDLE LS EELHMP+S+LIILNG
Sbjct: 498  TPEGEACGLVKNLALMTHVTTDEDEQPIISLCYCLGVEDLEQLSAEELHMPSSYLIILNG 557

Query: 2159 LILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGV 1980
            LILGKHR PQ FA+AMRKLRRAGKIGEF+SIFVNEKQ  VYIASDGGRVCRPLVIADKGV
Sbjct: 558  LILGKHRSPQRFANAMRKLRRAGKIGEFISIFVNEKQRSVYIASDGGRVCRPLVIADKGV 617

Query: 1979 SRIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFT 1800
            SRIKE HMKEL+DGVR FDSFLR+GLIEYLDVNEENN+LIALYE EATPE+THIEIEPFT
Sbjct: 618  SRIKEQHMKELRDGVRNFDSFLRDGLIEYLDVNEENNSLIALYEKEATPETTHIEIEPFT 677

Query: 1799 ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTR 1620
            ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLIYLLVYPQRPLLTTR
Sbjct: 678  ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLIYLLVYPQRPLLTTR 737

Query: 1619 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYE 1440
            TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SA   KYE
Sbjct: 738  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSATCLKYE 797

Query: 1439 NGTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGL 1260
            N TSDRII+PQR+ Y+ E+ QILD+DGLA+PGEIIRP  IYINK+SP VTR P++SPM L
Sbjct: 798  NNTSDRIIKPQRQGYEAERMQILDEDGLASPGEIIRPHDIYINKESPTVTRTPVSSPMSL 857

Query: 1259 PDSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQK 1080
            PDSAYKPS QTYKGPEGET V+DRVAL SDKNNNLC+KFM+RHTRRPE+GDKFSSRHGQK
Sbjct: 858  PDSAYKPSRQTYKGPEGETPVVDRVALHSDKNNNLCIKFMIRHTRRPEIGDKFSSRHGQK 917

Query: 1079 GVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 900
            GVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF
Sbjct: 918  GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 977

Query: 899  GEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK 720
            GEPSGHAD V+ ISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK
Sbjct: 978  GEPSGHADTVDTISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK 1037

Query: 719  MHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 540
            MHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV
Sbjct: 1038 MHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 1097

Query: 539  CRKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            CRKCGLLGYYNYKLKTG+CS CKNGENISTMKLPYACKLLIQELQSMNIVPRL+L+EA
Sbjct: 1098 CRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLIQELQSMNIVPRLKLSEA 1155


>ref|XP_009604369.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            tomentosiformis]
          Length = 1155

 Score = 1949 bits (5049), Expect = 0.0
 Identities = 967/1138 (84%), Positives = 1031/1138 (90%), Gaps = 4/1138 (0%)
 Frame = -1

Query: 3767 GIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSK 3588
            GIDKQ+LA+P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV+TEIKKIV AN EIRS  
Sbjct: 19   GIDKQYLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVKTEIKKIVQANKEIRSIL 78

Query: 3587 KDENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTSV 3408
             D N+YL+Y DV IGEPS+M+D VTEKL+P KCRL D+TYAAPI V IEYTTGS    SV
Sbjct: 79   -DPNIYLKYNDVHIGEPSIMVDGVTEKLNPQKCRLCDLTYAAPIYVDIEYTTGSHGQISV 137

Query: 3407 QMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLS 3228
            Q KK+V IGRMP+MLRSCCCVLYGKDEEELA+LGECPLDPGGYFVIKGTEKVILIQEQLS
Sbjct: 138  QTKKNVTIGRMPVMLRSCCCVLYGKDEEELAKLGECPLDPGGYFVIKGTEKVILIQEQLS 197

Query: 3227 KNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGM 3048
            KNRIIIDTDKKGCVQ              ++KMEKEK+YL LN FK+KVPIM+VMKAMGM
Sbjct: 198  KNRIIIDTDKKGCVQASVTSSTEKTKSKTIVKMEKEKVYLELNMFKTKVPIMIVMKAMGM 257

Query: 3047 ESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLE--KQVKQLPYPYAPVEK 2874
            ESDQEVVQM+GRDPR+SALLLPSIEECA   VYTQHQALE+LE  K +K   Y   PVEK
Sbjct: 258  ESDQEVVQMIGRDPRFSALLLPSIEECADLKVYTQHQALEFLESDKMLKMSSYSAGPVEK 317

Query: 2873 --RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXX 2700
              RALSILRDIF+AN+PV Q+NFR KCIYVAVM+RRMMEAILNKDAMDDKDYVGNKR   
Sbjct: 318  GARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRLEL 377

Query: 2699 XXXXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGN 2520
                        FKTMNDE RK VDA L++ SRSS  D+S ++ KDSITVG+ERTLSTGN
Sbjct: 378  SGQLLSLLFEDLFKTMNDEARKTVDALLARPSRSSRLDISPFIAKDSITVGMERTLSTGN 437

Query: 2519 WDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 2340
            WDVKRFRMHRKGMTQVVARLSYIG+LGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD
Sbjct: 438  WDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 497

Query: 2339 TPEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNG 2160
            TPEGEACGL+KNLALMTHVTTDE+E PIISLCY LGVEDLE LS EELHMP+S+LIILNG
Sbjct: 498  TPEGEACGLVKNLALMTHVTTDEDEHPIISLCYCLGVEDLEQLSAEELHMPSSYLIILNG 557

Query: 2159 LILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGV 1980
            LILGKHR PQ FA+AMRKLRRAGKIGEF+SIFVNEKQ  VYIASDGGRVCRPLVIADKGV
Sbjct: 558  LILGKHRSPQRFANAMRKLRRAGKIGEFISIFVNEKQRSVYIASDGGRVCRPLVIADKGV 617

Query: 1979 SRIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFT 1800
            SRIKE HMKEL+DGVR FDSFL++GLIEYLDVNEENN+LIALYE EATPE+THIEIEPFT
Sbjct: 618  SRIKEQHMKELRDGVRNFDSFLKDGLIEYLDVNEENNSLIALYEKEATPETTHIEIEPFT 677

Query: 1799 ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTR 1620
            ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTLIYLLVYPQRPLLTTR
Sbjct: 678  ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLIYLLVYPQRPLLTTR 737

Query: 1619 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYE 1440
            TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SA   KYE
Sbjct: 738  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSATCLKYE 797

Query: 1439 NGTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGL 1260
            N TSDRII+PQR+ Y+ E+ QILD+DGLA+PGEIIRP  IYINK+SP VTR P++SPM L
Sbjct: 798  NNTSDRIIKPQRQGYEAERMQILDEDGLASPGEIIRPHDIYINKESPTVTRTPVSSPMSL 857

Query: 1259 PDSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQK 1080
            PDSAYKPS QTYKGPEGET V+DRVAL SDKNNNLC+KFM+RHTRRPE+GDKFSSRHGQK
Sbjct: 858  PDSAYKPSRQTYKGPEGETPVVDRVALHSDKNNNLCIKFMIRHTRRPEIGDKFSSRHGQK 917

Query: 1079 GVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 900
            GVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF
Sbjct: 918  GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 977

Query: 899  GEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK 720
            GEPSGHAD V+ ISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK
Sbjct: 978  GEPSGHADTVDTISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK 1037

Query: 719  MHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 540
            MHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV
Sbjct: 1038 MHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 1097

Query: 539  CRKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            CRKCGLLGYYNYKLKTG+CS CKNGENISTMKLPYACKLLIQELQSMNIVPRL+L EA
Sbjct: 1098 CRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1155


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Solanum tuberosum]
          Length = 1153

 Score = 1936 bits (5015), Expect = 0.0
 Identities = 966/1138 (84%), Positives = 1029/1138 (90%), Gaps = 4/1138 (0%)
 Frame = -1

Query: 3767 GIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSK 3588
            GIDKQ LA+P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFVRTEIKKIV AN EIRS  
Sbjct: 17   GIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANQEIRSIL 76

Query: 3587 KDENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTSV 3408
             D N+YLRY+DV IGEPSM+ D VTEKL P KCRLSD TYAAPI VTIEYTTGS   TSV
Sbjct: 77   -DPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTIEYTTGSHGQTSV 135

Query: 3407 QMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLS 3228
              KK+V+IGRMPIMLRS CCVLYGKDE+ELARLGECPLDPGGYFVIKGTEKVILIQEQLS
Sbjct: 136  STKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLS 195

Query: 3227 KNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGM 3048
            KNRIIIDTDKKG VQ              +IKMEKEK+YL LN FK+KVPIMVVMKAMGM
Sbjct: 196  KNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGM 255

Query: 3047 ESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLE--KQVKQLPYPYAPVEK 2874
            ESDQEVVQM+GRDPR+SALLLPSIEECA   +YTQHQALE+LE  K +K   Y   PVEK
Sbjct: 256  ESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLESDKMLKMPSYSTGPVEK 315

Query: 2873 --RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXX 2700
              RALSILRDIF+AN+PV Q+NFR KCIYVAVM+RRMMEAILNKDAMDDKDYVGNKR   
Sbjct: 316  GARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRLEL 375

Query: 2699 XXXXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGN 2520
                        FKTMNDE R+ +D  L++ SRSS  D+SQY+VKDSIT+GLERTLSTGN
Sbjct: 376  SGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVKDSITMGLERTLSTGN 435

Query: 2519 WDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 2340
            WDVKRFRMHRKGMTQVVARLSYIG+LGHMTKISPQFEKSRKVSGPRALQPSQ+GMLCPCD
Sbjct: 436  WDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQFGMLCPCD 495

Query: 2339 TPEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNG 2160
            TPEGEACGL+KNLALMTHVTTDE+E PI+SLCY LGVEDLE LS EELHMP S+LI LNG
Sbjct: 496  TPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEELHMPTSYLITLNG 555

Query: 2159 LILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGV 1980
            LILGKH+ PQ FA+AMR+LRRAGKIGEFVSIFVNEKQ CVYIASDGGRVCRPLVIADKGV
Sbjct: 556  LILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGV 615

Query: 1979 SRIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFT 1800
            SRIKEHHM+EL+DGVR FDSFL++GLIEYLDVNEENN LIALYE EATPE+THIEIEPFT
Sbjct: 616  SRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYEKEATPETTHIEIEPFT 675

Query: 1799 ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTR 1620
            ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+YLLVYPQRPLLTTR
Sbjct: 676  ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLLTTR 735

Query: 1619 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYE 1440
            TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SAI QKYE
Sbjct: 736  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSAICQKYE 795

Query: 1439 NGTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGL 1260
            NGTSDRII+PQR+ ++ +K QILDDDG+AAPGE IR   IYINK+SP VTR PITSPMGL
Sbjct: 796  NGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHDIYINKESPTVTRTPITSPMGL 855

Query: 1259 PDSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQK 1080
            PDSAYK S QTYKGPEGETAV+DRVAL SD+NNNL +KFM+RHTRRPE+GDKFSSRHGQK
Sbjct: 856  PDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPEIGDKFSSRHGQK 915

Query: 1079 GVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 900
            GVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF
Sbjct: 916  GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 975

Query: 899  GEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK 720
            GEPSGHAD V++ISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK
Sbjct: 976  GEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK 1035

Query: 719  MHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 540
            MHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV
Sbjct: 1036 MHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 1095

Query: 539  CRKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            CRKCGLLGYYNYKLKTG+CS CKNGENISTMKLPYACKLL QELQSMNIVPRL+L EA
Sbjct: 1096 CRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNIVPRLKLAEA 1153


>ref|XP_010312066.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Solanum
            lycopersicum] gi|723738099|ref|XP_010312067.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Solanum
            lycopersicum]
          Length = 1153

 Score = 1922 bits (4980), Expect = 0.0
 Identities = 957/1138 (84%), Positives = 1027/1138 (90%), Gaps = 4/1138 (0%)
 Frame = -1

Query: 3767 GIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSK 3588
            GIDKQ LA+ +K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFVRTEIKKIV AN EIRS+ 
Sbjct: 17   GIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANQEIRSTL 76

Query: 3587 KDENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTSV 3408
             D N+YLRY+DV IGEPSM+ D VTEKL P KCRLSD TYAAPI VTI+YTTGS   TSV
Sbjct: 77   -DPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTIDYTTGSHGQTSV 135

Query: 3407 QMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLS 3228
              KK+V+IGRMPIMLRS CCVLYGKDE+ELARLGECPLDPGGYFVIKGTEKVILIQEQLS
Sbjct: 136  STKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLS 195

Query: 3227 KNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGM 3048
            KNRIIIDTDKKG VQ              +IKMEKEK+YL LN FK+KVPIMVVMKAMGM
Sbjct: 196  KNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGM 255

Query: 3047 ESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLE--KQVKQLPYPYAPVEK 2874
            ESDQEVVQM+GRDPR+SALLLPSIEECA   +YTQ QALE+LE  K +K   Y   P+EK
Sbjct: 256  ESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFLESDKMLKMPSYSTGPIEK 315

Query: 2873 --RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXX 2700
              RALSILRDIF+AN+PV Q+NFR KCIYVAVM+RRMMEAILNKDAMDDKDYVGNKR   
Sbjct: 316  GARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRLEL 375

Query: 2699 XXXXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGN 2520
                        FKTMNDE R+ +D  L++ SRSS  D+SQY++KDSIT+GLERTLSTGN
Sbjct: 376  SGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIIKDSITMGLERTLSTGN 435

Query: 2519 WDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 2340
            WDVKRFRMHRKGMTQVVARLSYIG+LGHMTKISPQFEKSRKVSGPRALQPSQ+GMLCPCD
Sbjct: 436  WDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQFGMLCPCD 495

Query: 2339 TPEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNG 2160
            TPEGEACGL+KNLALMTHVTTDE+E PI+SLCY LGVEDLE LS EELHMP S+LI LNG
Sbjct: 496  TPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEELHMPTSYLITLNG 555

Query: 2159 LILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGV 1980
            LILGKH+ PQ FA+AMR+LRRAGK+GEFVSIFVNEKQ CVYIASDGGRVCRPLVIADKGV
Sbjct: 556  LILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGV 615

Query: 1979 SRIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFT 1800
            SRIKEHHM+EL+DG+R FDSFL++GLIEYLDVNEENN LIALYE EATPE+THIEIEPFT
Sbjct: 616  SRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYEKEATPETTHIEIEPFT 675

Query: 1799 ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTR 1620
            ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+YLLVYPQRPLLTTR
Sbjct: 676  ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLLTTR 735

Query: 1619 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYE 1440
            TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SAI QKYE
Sbjct: 736  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSAICQKYE 795

Query: 1439 NGTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGL 1260
            NGTSDRII+PQR+  + ++ QILDDDG+AAPGE IR   IYINK+SP VTR P+TSPMGL
Sbjct: 796  NGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHDIYINKESPTVTRTPVTSPMGL 855

Query: 1259 PDSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQK 1080
            PDSAYK S QTYKGPEGETAV+DRVAL SD+NNNL +KFM+RHTRRPE+GDKFSSRHGQK
Sbjct: 856  PDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPELGDKFSSRHGQK 915

Query: 1079 GVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 900
            GVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF
Sbjct: 916  GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 975

Query: 899  GEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK 720
            GEPSGHAD V+AISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMV+DK
Sbjct: 976  GEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVVDK 1035

Query: 719  MHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 540
            MHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV
Sbjct: 1036 MHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 1095

Query: 539  CRKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            CRKCGLLGYYNYKLKTG+CS CKNGENISTMKLPYACKLL QELQSMNIVPRL+L EA
Sbjct: 1096 CRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNIVPRLKLAEA 1153


>ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera] gi|731414225|ref|XP_010659065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1157

 Score = 1905 bits (4936), Expect = 0.0
 Identities = 940/1135 (82%), Positives = 1024/1135 (90%), Gaps = 2/1135 (0%)
 Frame = -1

Query: 3764 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSKK 3585
            I K F A PVK AVDKF LLPEFLKVRGLVKQHLDSFNYFV+T+IKKIV AN+ I SS  
Sbjct: 24   IHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSV- 82

Query: 3584 DENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTSVQ 3405
            D ++YLR+KDVRIGEPS+ +D ++EKL+PH CRLSD+TYAAPILV IEY TGS    +  
Sbjct: 83   DPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKTRV 142

Query: 3404 MKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 3225
             K DVVIGRMPIMLRSCCCVLY KDE ELARLGECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 143  EKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 202

Query: 3224 NRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGME 3045
            NRIIIDTDKKG +               VI MEKEKI+L LNQF SK+PIM+VMKAMGME
Sbjct: 203  NRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGME 262

Query: 3044 SDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPYAPVEK--R 2871
            SDQEVVQMVGR+PRYSALLLPS+EECA   +YTQ QALE+LE++VK+LP+    +EK  R
Sbjct: 263  SDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEGR 322

Query: 2870 ALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXXXX 2691
             ++ILRD FIAN+PVRQ NFR KC+YVAVMLRRMM+AILNKDAMDDKDYVGNKR      
Sbjct: 323  GMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQ 382

Query: 2690 XXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGNWDV 2511
                     FKTM  EV+K +DA L+K SRSS FD SQ++V+DSITVGLERTLSTGNWDV
Sbjct: 383  LISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQFIVRDSITVGLERTLSTGNWDV 442

Query: 2510 KRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2331
            KRFRMHRKGM+QVVARLSYIG+LGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 443  KRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 502

Query: 2330 GEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGLIL 2151
            GEACGL+KNLALMTHVTTDEEE P+ISLCYSLGVEDLELLSGEELH PNSFLII NGLIL
Sbjct: 503  GEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFNGLIL 562

Query: 2150 GKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVSRI 1971
            GKHRRPQ FA+A+RKLRRAGKIGEFVS+FVNEKQHCVYIASDGGRVCRP+VIADKG SRI
Sbjct: 563  GKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADKGKSRI 622

Query: 1970 KEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTILG 1791
            KEHHMKEL DGVRTFD FLR+GLIEYLDVNEENNALIALYE +A PE+THIEIEPFTILG
Sbjct: 623  KEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEPFTILG 682

Query: 1790 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRTIE 1611
            VCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+L+YLLVYPQRPLLTTRTIE
Sbjct: 683  VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIE 742

Query: 1610 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYENGT 1431
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SA+ Q+YEN  
Sbjct: 743  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQRYENNA 802

Query: 1430 SDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGLPDS 1251
            SDRI+RP +  +D E+ QILDDDGLAAPGEII+P+ IYINK+SPI+T+GP+ SP+GLPDS
Sbjct: 803  SDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPVGLPDS 862

Query: 1250 AYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQKGVC 1071
            AYKPS QT+KGPEGE +V+DRVALCSDKN+NLC+KF++RHTRRPEVGDKFSSRHGQKGVC
Sbjct: 863  AYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQKGVC 922

Query: 1070 GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGEP 891
            GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRFHYGSAFGEP
Sbjct: 923  GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP 982

Query: 890  SGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKMHA 711
            SGHADKVE IS+TLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHA
Sbjct: 983  SGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHA 1042

Query: 710  RGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRK 531
            RGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR 
Sbjct: 1043 RGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRV 1102

Query: 530  CGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            CGLLGYYN+KLK G+CSTCKNG+NISTMKLPYACKLL QELQ+MN+VPRL+LTEA
Sbjct: 1103 CGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1157


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1870 bits (4845), Expect = 0.0
 Identities = 933/1137 (82%), Positives = 1016/1137 (89%), Gaps = 4/1137 (0%)
 Frame = -1

Query: 3764 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSKK 3585
            +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+ I S   
Sbjct: 24   VDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGV- 82

Query: 3584 DENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGS-GQNTSV 3408
            D ++YLR+KDVRIGEPSM I+ V+EK++PH CRLSD+TYAAPI V IEY  GS GQ T +
Sbjct: 83   DPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKTRL 142

Query: 3407 QMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLS 3228
            + K D+VIGRMPIMLRSCCCVLYGKDE ELARLGECPLDPGGYFVIKG EKVILIQEQLS
Sbjct: 143  E-KNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLS 201

Query: 3227 KNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGM 3048
            KNRIIID DKKG +               VI+MEKEKIYL LNQF  K+PIMVVMKAMGM
Sbjct: 202  KNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGM 261

Query: 3047 ESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPY--PYAPVEK 2874
            ESDQEVVQMVGRDP Y+A+LLPSIEECA   +YTQ QALEYLE +VK++ Y  P +  E 
Sbjct: 262  ESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEG 321

Query: 2873 RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXXX 2694
            RALSILRD+F+AN+PVR  NFR KC+YVAVMLRRM+EAILNKDAMDDKDYVGNKR     
Sbjct: 322  RALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLELSG 381

Query: 2693 XXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYV-VKDSITVGLERTLSTGNW 2517
                      FKT   EV+K +D  LSK SRSS  D SQ++  +++IT GLERTLSTGN+
Sbjct: 382  QLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNF 441

Query: 2516 DVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2337
            D+KRF+MHRKGMTQV+ARLS+IGTLG+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 442  DIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 501

Query: 2336 PEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGL 2157
            PEGEACGL+KNLALMTHVTTDE+EGP+ISLCY LGVEDLELLSGEELH PNSFL+ILNGL
Sbjct: 502  PEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILNGL 561

Query: 2156 ILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVS 1977
            ILGKHRRPQ FA AMRKLRRAGK+GEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKGVS
Sbjct: 562  ILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGVS 621

Query: 1976 RIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTI 1797
            RIKEHHMKEL DGVRTFD FLR+GLIEYLDVNEENNALIALYEGEATPE+THIEIEPFTI
Sbjct: 622  RIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTI 681

Query: 1796 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRT 1617
            LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+YLLVYPQRPLLTTRT
Sbjct: 682  LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTRT 741

Query: 1616 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYEN 1437
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ SA+ QKYE 
Sbjct: 742  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVNQKYET 801

Query: 1436 GTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGLP 1257
            G SDRI+RPQR     E+ QILDDDG+A PGEIIRP+ IYINK+S I TRG   S   LP
Sbjct: 802  GASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRVSSESLP 861

Query: 1256 DSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQKG 1077
            DSAY+P+ QTYKGPEGE+ V+DRVALC+D+N+NL +KF++RHTRRPEVGDKFSSRHGQKG
Sbjct: 862  DSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSRHGQKG 921

Query: 1076 VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFG 897
            VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRFHYGSAFG
Sbjct: 922  VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 981

Query: 896  EPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKM 717
            EPSGHAD+VEAISETL+KHGFSYNGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 982  EPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1041

Query: 716  HARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVC 537
            HARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLMISSDPFEVQVC
Sbjct: 1042 HARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVC 1101

Query: 536  RKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            RKCGLLGYY++KLKTG+CS+CKNG+N+STMKLPYACKLLIQELQSMNIVPRL+L+EA
Sbjct: 1102 RKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1158


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1859 bits (4815), Expect = 0.0
 Identities = 920/1134 (81%), Positives = 1005/1134 (88%), Gaps = 2/1134 (0%)
 Frame = -1

Query: 3761 DKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSKKD 3582
            DKQ LAAPVKS VDKFQLLPEFLKVRGLVKQHLDSFNYFV T I+KIV AN+ I S   D
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGI-D 75

Query: 3581 ENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTSVQM 3402
             +++LR+KDVRIG+PSM +D V+EKL+PH CRLSD+TYAAPILV IEY  GS    +   
Sbjct: 76   PSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTME 135

Query: 3401 KKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLSKN 3222
            K DVVIGR+PIMLRSC CVLYGKDE ELARLGECPLDPGGYF+IKGTEKV+LIQEQLSKN
Sbjct: 136  KNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKN 195

Query: 3221 RIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGMES 3042
            R+IIDTDKKG +               VI+MEK K+YL LNQF  K+PIMVVMKAMGMES
Sbjct: 196  RVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGMES 255

Query: 3041 DQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPYAPVEK--RA 2868
            DQEVVQMVGRDPRYSALLLPSIEECA  ++YTQ +ALEYLE +VK+  +   P ++  RA
Sbjct: 256  DQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRA 315

Query: 2867 LSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXXXXX 2688
             SILRD+F+AN+PV   NFR KC YVAVMLRRM+EA+LNKDAMDDKDYVGNKR       
Sbjct: 316  FSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQL 375

Query: 2687 XXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGNWDVK 2508
                    FKTM  EV+K VD  LSK SRSS FD+SQ++V+DSITVGLERTLSTGN+DVK
Sbjct: 376  VSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVK 435

Query: 2507 RFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 2328
            RF+MHRKGMTQV+ARLS+IGTLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG
Sbjct: 436  RFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 495

Query: 2327 EACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGLILG 2148
            EACGL+KNLALMTHVTTDEEEGP+ISLCY LGVEDLELLSGEELH PNSFL+I NGLILG
Sbjct: 496  EACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILG 555

Query: 2147 KHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVSRIK 1968
            KHRRP+ FA  MRKLRRAGKIGEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKG+SRIK
Sbjct: 556  KHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIK 615

Query: 1967 EHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTILGV 1788
            EHHMKEL DGVR+FD FLREGLIEYLDVNEENNALIALYEG+ATP++THIEIEPFTILGV
Sbjct: 616  EHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGV 675

Query: 1787 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRTIEL 1608
             AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+YLLVYPQRPLLTTRTIEL
Sbjct: 676  IAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIEL 735

Query: 1607 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYENGTS 1428
            VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AI QKY N TS
Sbjct: 736  VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTS 795

Query: 1427 DRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGLPDSA 1248
            DRI+RP R     E+ QILDDDGLAAPGEII+P+ +YINK+SP+ TRG I SP G  DS 
Sbjct: 796  DRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSR 855

Query: 1247 YKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQKGVCG 1068
            Y+ + QTYKGP+GET V+DRVALCSDKN +LC+KF++RHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 856  YRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCG 915

Query: 1067 TIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGEPS 888
            TI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRFHYGSAFGEPS
Sbjct: 916  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 975

Query: 887  GHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKMHAR 708
            GHAD VE+ISETLVKHGFSYNGKD IYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 976  GHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1035

Query: 707  GSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKC 528
            GSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR C
Sbjct: 1036 GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVC 1095

Query: 527  GLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            GLLGYYN+KLK G+CSTCKNG NIS+MKLPYACKLLIQELQSMNIVPRL+L EA
Sbjct: 1096 GLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1857 bits (4811), Expect = 0.0
 Identities = 919/1134 (81%), Positives = 1006/1134 (88%), Gaps = 2/1134 (0%)
 Frame = -1

Query: 3761 DKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSKKD 3582
            DKQ LAAPVKS VDKFQLLPEFLKVRGLVKQHLDSFNYFV T I+KIV AN+ I S   D
Sbjct: 17   DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVSGI-D 75

Query: 3581 ENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTSVQM 3402
             +++LR+KDVRIG+PSM +D V+EKL+PH CRLSD+TYAAPILV IEY  GS    +   
Sbjct: 76   PSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTME 135

Query: 3401 KKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLSKN 3222
            K DVVIGR+PIMLRSC CVLYGKDE ELARLGECPLDPGGYF+IKGTEKV+LIQEQLSKN
Sbjct: 136  KNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKN 195

Query: 3221 RIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGMES 3042
            R+IIDTDKKG +               VI+MEK K+YL LNQF  K+PIMVVMKAMG+ES
Sbjct: 196  RVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIES 255

Query: 3041 DQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPYAPVEK--RA 2868
            DQEVVQMVGRDPRYSALLLPSIEECA  ++YTQ +ALEYLE +VK+  +   P ++  RA
Sbjct: 256  DQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRA 315

Query: 2867 LSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXXXXX 2688
             SILRD+F+AN+PV   NFR KC YVAVMLRRM+EA+LNKDAMDDKDYVGNKR       
Sbjct: 316  FSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQL 375

Query: 2687 XXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGNWDVK 2508
                    FKTM  EV+K VD  LSK SRSS FD+SQ++V+DSITVGLERTLSTGN+DVK
Sbjct: 376  VSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVK 435

Query: 2507 RFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 2328
            RF+MHRKGMTQV+ARLS+IGTLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG
Sbjct: 436  RFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 495

Query: 2327 EACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGLILG 2148
            EACGL+KNLALMTHVTTDEEEGP+ISLCY LGVEDLELLSGEELH PNSFL+I NGLILG
Sbjct: 496  EACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILG 555

Query: 2147 KHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVSRIK 1968
            KHRRP+ FA  MRKLRRAGKIGEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKG+SRIK
Sbjct: 556  KHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIK 615

Query: 1967 EHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTILGV 1788
            EHHMKEL DGVR+FD FLREGLIEYLDVNEENNALIALYEG+ATP++THIEIEPFTILGV
Sbjct: 616  EHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGV 675

Query: 1787 CAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRTIEL 1608
             AGLIPYPHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+YLLVYPQRPLLTTRTIEL
Sbjct: 676  IAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIEL 735

Query: 1607 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYENGTS 1428
            VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AI QKY N TS
Sbjct: 736  VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTS 795

Query: 1427 DRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGLPDSA 1248
            DRI+RP R     E+ QILDDDGLAAPGEII+P+ +YINK+SP+ TRG I SP G  DS 
Sbjct: 796  DRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSR 855

Query: 1247 YKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQKGVCG 1068
            Y+ + QTYKGP+GET V+DRVALCSDKN +LC+KF++RHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 856  YRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCG 915

Query: 1067 TIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGEPS 888
            TI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRFHYGSAFGEPS
Sbjct: 916  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 975

Query: 887  GHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKMHAR 708
            GHAD VE+ISETLVKHGFSYNGKD IYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 976  GHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1035

Query: 707  GSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKC 528
            GSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR C
Sbjct: 1036 GSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVC 1095

Query: 527  GLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            GLLGYYN+KLK G+CSTCKNG+NIS+MKLPYACKLLIQELQSMNIVPRL+L EA
Sbjct: 1096 GLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Nelumbo nucifera]
          Length = 1140

 Score = 1857 bits (4810), Expect = 0.0
 Identities = 914/1135 (80%), Positives = 1008/1135 (88%), Gaps = 2/1135 (0%)
 Frame = -1

Query: 3764 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSKK 3585
            +DKQF+A+PVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV   IKKIV ANN I +S  
Sbjct: 9    VDKQFIASPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVEANNRITASS- 67

Query: 3584 DENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTSVQ 3405
            D N YL+Y DV+IG PS+  DNVT+ L+PH CRLSD+TYAAPI+V IEY        +++
Sbjct: 68   DPNFYLKYTDVKIGTPSITADNVTDTLTPHICRLSDMTYAAPIMVNIEYVKKFCDQITIE 127

Query: 3404 MKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 3225
             K++VVIGRMPIMLRSCCCVLYGKDE ELARLGECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 128  KKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 187

Query: 3224 NRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGME 3045
            NRIIIDTDKKGC+               +I M+K KIYL LN F   +PIMVVMKAMGME
Sbjct: 188  NRIIIDTDKKGCLNASVTSSTEATKSKTIILMDKGKIYLRLNAFVKDIPIMVVMKAMGME 247

Query: 3044 SDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPYAPVEK--R 2871
            SDQEVVQMVGRDP+Y ALLLPSI+ECA   +YTQ QALE+LEK+VK+  +    +EK  R
Sbjct: 248  SDQEVVQMVGRDPKYGALLLPSIQECAGHGIYTQQQALEFLEKKVKKFSFSNPALEKEGR 307

Query: 2870 ALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXXXX 2691
            A+  LR++FIAN+PVRQ NFR KCIYVAVM+RRMMEA LNKDAMDDKDYVGNKR      
Sbjct: 308  AMDTLRNVFIANVPVRQNNFRPKCIYVAVMMRRMMEAFLNKDAMDDKDYVGNKRLELSGQ 367

Query: 2690 XXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGNWDV 2511
                     FKTMN E RK+VD  L+K +RS   D+++Y+VKDSIT GLER +STGNWD+
Sbjct: 368  LISLLFEDLFKTMNSEARKSVDLQLAKVNRSVPVDIARYIVKDSITYGLERAISTGNWDL 427

Query: 2510 KRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2331
            KRFRMHRKGMTQV+ARLS+I TLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 428  KRFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 487

Query: 2330 GEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGLIL 2151
            GEACGL+KNLALMTHVTTD+EEGP+ISLC+SLGVEDLELLS EE+H PNS+L+I NGLIL
Sbjct: 488  GEACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLSAEEIHTPNSYLVIFNGLIL 547

Query: 2150 GKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVSRI 1971
            GKHR+P+ FA+A+RKLRR+GKIGEFVS++VNE+Q CVYIASDGGRVCRPLVIADKGVSRI
Sbjct: 548  GKHRQPKQFANALRKLRRSGKIGEFVSVYVNERQRCVYIASDGGRVCRPLVIADKGVSRI 607

Query: 1970 KEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTILG 1791
            KEHHMKEL DGVR+F+ FLREGLIEYLDVNEENNALIALYEGEA PE+THIEIEPFTILG
Sbjct: 608  KEHHMKELMDGVRSFNDFLREGLIEYLDVNEENNALIALYEGEAEPETTHIEIEPFTILG 667

Query: 1790 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRTIE 1611
            VCAGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL RMDTL+YLLVYPQRPLLTTRTIE
Sbjct: 668  VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLCRMDTLLYLLVYPQRPLLTTRTIE 727

Query: 1610 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYENGT 1431
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK+SAI Q+Y N T
Sbjct: 728  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQRYPNDT 787

Query: 1430 SDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGLPDS 1251
            SDRIIRPQ+ R + EK  ILD DG+AAPGEIIRP  IYINK++P+ TR   TSP GLPDS
Sbjct: 788  SDRIIRPQKVRSNAEK--ILDADGIAAPGEIIRPHDIYINKETPVNTRDKFTSPTGLPDS 845

Query: 1250 AYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQKGVC 1071
            AYK + QTYKGP+GETAV+DRVALCSDK+NNLC+KF++RHTRRPEVGDKFSSRHGQKGVC
Sbjct: 846  AYKSTRQTYKGPQGETAVVDRVALCSDKDNNLCIKFLIRHTRRPEVGDKFSSRHGQKGVC 905

Query: 1070 GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGEP 891
            GTIIQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLG KAGVSCGRFHYGSAFGEP
Sbjct: 906  GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEP 965

Query: 890  SGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKMHA 711
            SGHADKVEAISETLV+HGFSYNGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKMHA
Sbjct: 966  SGHADKVEAISETLVRHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHA 1025

Query: 710  RGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRK 531
            R  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASMLI+ERLM+SSDPFEVQVCR 
Sbjct: 1026 RARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRV 1085

Query: 530  CGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            CGLLGYYN+KLKTG+CSTCK+G++IS MKLPYACKLL QELQSMN+VPRL+LTEA
Sbjct: 1086 CGLLGYYNHKLKTGICSTCKSGDHISKMKLPYACKLLFQELQSMNVVPRLKLTEA 1140


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1856 bits (4808), Expect = 0.0
 Identities = 928/1137 (81%), Positives = 1011/1137 (88%), Gaps = 4/1137 (0%)
 Frame = -1

Query: 3764 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSKK 3585
            +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+ I S   
Sbjct: 24   VDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGV- 82

Query: 3584 DENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGS-GQNTSV 3408
            D ++YLR+KDVRIGEPSM I+ V+EK++PH CRLSD+TYAAPI V IEY  GS GQ T +
Sbjct: 83   DPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKTRL 142

Query: 3407 QMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLS 3228
            + K D+VIGRMPIMLRSCCCVLYGKDE ELARLGECPLDPGGYFVIKG EK     EQLS
Sbjct: 143  E-KNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEK-----EQLS 196

Query: 3227 KNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGM 3048
            KNRIIID DKKG +               VI+MEKEKIYL LNQF  K+PIMVVMKAMGM
Sbjct: 197  KNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGM 256

Query: 3047 ESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPY--PYAPVEK 2874
            ESDQEVVQMVGRDP Y+A+LLPSIEECA   +YTQ QALEYLE +VK++ Y  P +  E 
Sbjct: 257  ESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEG 316

Query: 2873 RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXXX 2694
            RALSILRD+F+AN+PVR  NFR KC+YVAVMLRRM+EAILNKDAMDDKDYVGNKR     
Sbjct: 317  RALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLELSG 376

Query: 2693 XXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYV-VKDSITVGLERTLSTGNW 2517
                      FKT   EV+K +D  LSK SRSS  D SQ++  +++IT GLERTLSTGN+
Sbjct: 377  QLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNF 436

Query: 2516 DVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2337
            D+KRF+MHRKGMTQV+ARLS+IGTLG+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 437  DIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 496

Query: 2336 PEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGL 2157
            PEGEACGL+KNLALMTHVTTDE+EGP+ISLCY LGVEDLELLSGEELH PNSFL+ILNGL
Sbjct: 497  PEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILNGL 556

Query: 2156 ILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVS 1977
            ILGKHRRPQ FA AMRKLRRAGK+GEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKGVS
Sbjct: 557  ILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGVS 616

Query: 1976 RIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTI 1797
            RIKEHHMKEL DGVRTFD FLR+GLIEYLDVNEENNALIALYEGEATPE+THIEIEPFTI
Sbjct: 617  RIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTI 676

Query: 1796 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRT 1617
            LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+YLLVYPQRPLLTTRT
Sbjct: 677  LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTRT 736

Query: 1616 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYEN 1437
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ SA+ QKYE 
Sbjct: 737  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVNQKYET 796

Query: 1436 GTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGLP 1257
            G SDRI+RPQR     E+ QILDDDG+A PGEIIRP+ IYINK+S I TRG   S   LP
Sbjct: 797  GASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRVSSESLP 856

Query: 1256 DSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQKG 1077
            DSAY+P+ QTYKGPEGE+ V+DRVALC+D+N+NL +KF++RHTRRPEVGDKFSSRHGQKG
Sbjct: 857  DSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSRHGQKG 916

Query: 1076 VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFG 897
            VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRFHYGSAFG
Sbjct: 917  VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 976

Query: 896  EPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKM 717
            EPSGHAD+VEAISETL+KHGFSYNGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 977  EPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1036

Query: 716  HARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVC 537
            HARG+GPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLMISSDPFEVQVC
Sbjct: 1037 HARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVC 1096

Query: 536  RKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            RKCGLLGYY++KLKTG+CS+CKNG+N+STMKLPYACKLLIQELQSMNIVPRL+L+EA
Sbjct: 1097 RKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1153


>ref|XP_012849950.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Erythranthe
            guttatus]
          Length = 1153

 Score = 1853 bits (4801), Expect = 0.0
 Identities = 918/1135 (80%), Positives = 1006/1135 (88%), Gaps = 2/1135 (0%)
 Frame = -1

Query: 3764 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSKK 3585
            IDKQFLAAPVK++VDKFQLLPEFLKVRGLVKQHLDS+NYFVRT IKKIV AN+ I ++K 
Sbjct: 20   IDKQFLAAPVKTSVDKFQLLPEFLKVRGLVKQHLDSYNYFVRTHIKKIVQANDLITATK- 78

Query: 3584 DENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTSVQ 3405
            D ++YLRYKDVRIGEPSM++D VTEKL+P KCRL D TY API V IEY TGS  + + Q
Sbjct: 79   DPSIYLRYKDVRIGEPSMVLDGVTEKLTPQKCRLLDTTYTAPIYVNIEYVTGSHGSKTTQ 138

Query: 3404 MKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 3225
            MK+DV+IGRMP+MLRSCCC+L+GKDEEELA+ GECPLDPGGYFV+KG EKV+LIQEQLSK
Sbjct: 139  MKRDVIIGRMPVMLRSCCCILHGKDEEELAKYGECPLDPGGYFVVKGNEKVLLIQEQLSK 198

Query: 3224 NRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGME 3045
            NRIIIDTD KGCVQ              +I+MEKEKIYL LN+F +KVPIM+V+KAMGME
Sbjct: 199  NRIIIDTDNKGCVQASVASITAKTKSKTIIRMEKEKIYLLLNKFGTKVPIMIVLKAMGME 258

Query: 3044 SDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPYAPVEK--R 2871
            SDQEVVQM+GRDPRYS LLLPSIE+C K +V+TQHQAL +L+ +V    Y     EK  R
Sbjct: 259  SDQEVVQMIGRDPRYSELLLPSIEDCVKESVHTQHQALAFLDHKVNNRSYYSTTYEKEGR 318

Query: 2870 ALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXXXX 2691
            ALSILRDIF+ANIPV Q NFRSKCIYVAVM+RRMMEAILNKDAMDDKDYVGNKR      
Sbjct: 319  ALSILRDIFLANIPVDQDNFRSKCIYVAVMVRRMMEAILNKDAMDDKDYVGNKRLELSGQ 378

Query: 2690 XXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGNWDV 2511
                     FK+MN+E  K++D  L+K SRSS  D+SQY+VKDSIT GLERTLSTGN+D+
Sbjct: 379  MLSLLFEDLFKSMNEEAVKSIDKILAKPSRSSRLDISQYIVKDSITFGLERTLSTGNFDL 438

Query: 2510 KRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2331
            KRF ++RKGM Q VARLSYI T+GHMTKI PQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 439  KRFGVNRKGMAQAVARLSYIATVGHMTKIIPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 498

Query: 2330 GEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGLIL 2151
            GEACGL+KNLALMTHVTTDE+EGP+ISLCY+LGVE  E LSGEE+HMPNS+LII NGLI+
Sbjct: 499  GEACGLVKNLALMTHVTTDEDEGPLISLCYTLGVESFEYLSGEEVHMPNSYLIIFNGLII 558

Query: 2150 GKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVSRI 1971
            GKHRRPQ F++AMR LRRAGKIGEF+SIFVNEKQ CVYIASDGGRVCRPLVIADKGVSRI
Sbjct: 559  GKHRRPQRFSNAMRTLRRAGKIGEFISIFVNEKQRCVYIASDGGRVCRPLVIADKGVSRI 618

Query: 1970 KEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTILG 1791
            KEHHMKELKDGVRTFDSFL++GLIEYLDVNEENNALIALYE  A  ++THIEIEPFTILG
Sbjct: 619  KEHHMKELKDGVRTFDSFLKDGLIEYLDVNEENNALIALYEDNAKEKTTHIEIEPFTILG 678

Query: 1790 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRTIE 1611
            VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ  R DTL+ LLVYPQRPLLTTRTIE
Sbjct: 679  VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQYCRTDTLMCLLVYPQRPLLTTRTIE 738

Query: 1610 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYENGT 1431
            LV +DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+M ++  KYEN T
Sbjct: 739  LVSFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRMVSVCLKYENST 798

Query: 1430 SDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGLPDS 1251
            SDRII+PQRE  D EK QILDDDGLAAPG+ IR D IYINKQSPIVTR P+ SPM LPDS
Sbjct: 799  SDRIIKPQREGQDCEKMQILDDDGLAAPGQTIRADDIYINKQSPIVTRVPVKSPMALPDS 858

Query: 1250 AYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQKGVC 1071
            +Y+ S + YKG  GE+AV+DRVAL SD++NN+ +KFM R TRRPEVGDKFSSRHGQKGVC
Sbjct: 859  SYRSSREHYKGSVGESAVIDRVALFSDRDNNMKIKFMTRQTRRPEVGDKFSSRHGQKGVC 918

Query: 1070 GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGEP 891
            GTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGEP
Sbjct: 919  GTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGEP 978

Query: 890  SGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKMHA 711
            SGHADKVE ISETLVKHGFSYNGKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMHA
Sbjct: 979  SGHADKVETISETLVKHGFSYNGKDFLYSGITGEPLQAYIFMGPIYYQKLKHMVLDKMHA 1038

Query: 710  RGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRK 531
            RG GP+VM+TRQPTEGRS NGGLRVGEMERDCLIAYG SML+YERLMISSD F VQVCRK
Sbjct: 1039 RGHGPKVMMTRQPTEGRSNNGGLRVGEMERDCLIAYGTSMLLYERLMISSDEFVVQVCRK 1098

Query: 530  CGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            CGLLGYYN+KLKTG+CSTCKNG+NISTMKLPYACKLLIQELQSMNIVPRL+LTEA
Sbjct: 1099 CGLLGYYNFKLKTGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLTEA 1153


>ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Nelumbo nucifera]
          Length = 1142

 Score = 1852 bits (4797), Expect = 0.0
 Identities = 914/1137 (80%), Positives = 1008/1137 (88%), Gaps = 4/1137 (0%)
 Frame = -1

Query: 3764 IDKQFLAAPVKSAVDKFQLLPEFLK--VRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSS 3591
            +DKQF+A+PVKSAVDKFQLLPEFLK  VRGLVKQHLDSFNYFV   IKKIV ANN I +S
Sbjct: 9    VDKQFIASPVKSAVDKFQLLPEFLKLQVRGLVKQHLDSFNYFVNIGIKKIVEANNRITAS 68

Query: 3590 KKDENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTS 3411
              D N YL+Y DV+IG PS+  DNVT+ L+PH CRLSD+TYAAPI+V IEY        +
Sbjct: 69   S-DPNFYLKYTDVKIGTPSITADNVTDTLTPHICRLSDMTYAAPIMVNIEYVKKFCDQIT 127

Query: 3410 VQMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQL 3231
            ++ K++VVIGRMPIMLRSCCCVLYGKDE ELARLGECPLDPGGYFV+KGTEKVILIQEQL
Sbjct: 128  IEKKENVVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 187

Query: 3230 SKNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMG 3051
            SKNRIIIDTDKKGC+               +I M+K KIYL LN F   +PIMVVMKAMG
Sbjct: 188  SKNRIIIDTDKKGCLNASVTSSTEATKSKTIILMDKGKIYLRLNAFVKDIPIMVVMKAMG 247

Query: 3050 MESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPYAPVEK- 2874
            MESDQEVVQMVGRDP+Y ALLLPSI+ECA   +YTQ QALE+LEK+VK+  +    +EK 
Sbjct: 248  MESDQEVVQMVGRDPKYGALLLPSIQECAGHGIYTQQQALEFLEKKVKKFSFSNPALEKE 307

Query: 2873 -RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXX 2697
             RA+  LR++FIAN+PVRQ NFR KCIYVAVM+RRMMEA LNKDAMDDKDYVGNKR    
Sbjct: 308  GRAMDTLRNVFIANVPVRQNNFRPKCIYVAVMMRRMMEAFLNKDAMDDKDYVGNKRLELS 367

Query: 2696 XXXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGNW 2517
                       FKTMN E RK+VD  L+K +RS   D+++Y+VKDSIT GLER +STGNW
Sbjct: 368  GQLISLLFEDLFKTMNSEARKSVDLQLAKVNRSVPVDIARYIVKDSITYGLERAISTGNW 427

Query: 2516 DVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2337
            D+KRFRMHRKGMTQV+ARLS+I TLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 428  DLKRFRMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 487

Query: 2336 PEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGL 2157
            PEGEACGL+KNLALMTHVTTD+EEGP+ISLC+SLGVEDLELLS EE+H PNS+L+I NGL
Sbjct: 488  PEGEACGLVKNLALMTHVTTDDEEGPLISLCHSLGVEDLELLSAEEIHTPNSYLVIFNGL 547

Query: 2156 ILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVS 1977
            ILGKHR+P+ FA+A+RKLRR+GKIGEFVS++VNE+Q CVYIASDGGRVCRPLVIADKGVS
Sbjct: 548  ILGKHRQPKQFANALRKLRRSGKIGEFVSVYVNERQRCVYIASDGGRVCRPLVIADKGVS 607

Query: 1976 RIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTI 1797
            RIKEHHMKEL DGVR+F+ FLREGLIEYLDVNEENNALIALYEGEA PE+THIEIEPFTI
Sbjct: 608  RIKEHHMKELMDGVRSFNDFLREGLIEYLDVNEENNALIALYEGEAEPETTHIEIEPFTI 667

Query: 1796 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRT 1617
            LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGN+AYNQL RMDTL+YLLVYPQRPLLTTRT
Sbjct: 668  LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNVAYNQLCRMDTLLYLLVYPQRPLLTTRT 727

Query: 1616 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYEN 1437
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK+SAI Q+Y N
Sbjct: 728  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQRYPN 787

Query: 1436 GTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGLP 1257
             TSDRIIRPQ+ R + EK  ILD DG+AAPGEIIRP  IYINK++P+ TR   TSP GLP
Sbjct: 788  DTSDRIIRPQKVRSNAEK--ILDADGIAAPGEIIRPHDIYINKETPVNTRDKFTSPTGLP 845

Query: 1256 DSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQKG 1077
            DSAYK + QTYKGP+GETAV+DRVALCSDK+NNLC+KF++RHTRRPEVGDKFSSRHGQKG
Sbjct: 846  DSAYKSTRQTYKGPQGETAVVDRVALCSDKDNNLCIKFLIRHTRRPEVGDKFSSRHGQKG 905

Query: 1076 VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFG 897
            VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLG KAGVSCGRFHYGSAFG
Sbjct: 906  VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFG 965

Query: 896  EPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKM 717
            EPSGHADKVEAISETLV+HGFSYNGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 966  EPSGHADKVEAISETLVRHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1025

Query: 716  HARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVC 537
            HAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASMLI+ERLM+SSDPFEVQVC
Sbjct: 1026 HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMLSSDPFEVQVC 1085

Query: 536  RKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            R CGLLGYYN+KLKTG+CSTCK+G++IS MKLPYACKLL QELQSMN+VPRL+LTEA
Sbjct: 1086 RVCGLLGYYNHKLKTGICSTCKSGDHISKMKLPYACKLLFQELQSMNVVPRLKLTEA 1142


>ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            tuberosum]
          Length = 1151

 Score = 1834 bits (4750), Expect = 0.0
 Identities = 916/1140 (80%), Positives = 1007/1140 (88%), Gaps = 5/1140 (0%)
 Frame = -1

Query: 3770 SGIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSS 3591
            +GIDKQ+LA+P+K++VDK+QL+PEFLKVRGLVKQHL SFNY V+T+IKKIV AN+EIRSS
Sbjct: 18   NGIDKQYLASPIKNSVDKYQLIPEFLKVRGLVKQHLASFNYLVKTDIKKIVRANHEIRSS 77

Query: 3590 KKDENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTS 3411
             +D N+YLRY+DVRIGEPSM  D V EKLSP KCRL+D+TYAAPI VT++YT       S
Sbjct: 78   TRDPNIYLRYRDVRIGEPSMTYDGVREKLSPQKCRLADLTYAAPIFVTVDYTMTRNGQIS 137

Query: 3410 VQMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQL 3231
            +  +KDVVI RMPIMLRSC CVLY KDEE+LA+LGECPLDPGGYF++ G EKVILIQEQL
Sbjct: 138  MLTQKDVVIARMPIMLRSCLCVLYEKDEEQLAKLGECPLDPGGYFIVNGREKVILIQEQL 197

Query: 3230 SKNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMG 3051
            SKNRIIIDTD+KGCVQ              +IKMEKEK+YL LN FK+KVPIMVVMKAMG
Sbjct: 198  SKNRIIIDTDRKGCVQASVICSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMG 257

Query: 3050 MESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLE--KQVKQLPYPYAPVE 2877
            MESDQEVVQM+GRDPRYSALLLPSIEECA   +YTQHQALE+LE  K +    Y  APVE
Sbjct: 258  MESDQEVVQMIGRDPRYSALLLPSIEECADLKLYTQHQALEFLESDKMLTMPSYYNAPVE 317

Query: 2876 K--RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXX 2703
            K  RALSILRD+F+A++PV Q+NFR KCIYVAVM+RR+MEAILNKDAMDDKDYVGNKR  
Sbjct: 318  KGARALSILRDMFLAHVPVHQHNFRKKCIYVAVMMRRVMEAILNKDAMDDKDYVGNKRLE 377

Query: 2702 XXXXXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDS-ITVGLERTLST 2526
                         FKTMNDEVR+  DA+    S+SS  D+  +V K + ITV L+RTLST
Sbjct: 378  LSGQLLSLLFEDLFKTMNDEVRREFDAS----SKSS--DLLYHVKKSNRITVELQRTLST 431

Query: 2525 GNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 2346
            GNWD+KRFRMHRKGMT+V+ARLSYIGTLG+MTKI PQFEKSRKVSGPRALQPSQ+GM+CP
Sbjct: 432  GNWDIKRFRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRALQPSQFGMICP 491

Query: 2345 CDTPEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIIL 2166
            CDTPEGEACGL+KNLALMTHVTTDE+  PI+SLCY LGVEDLE LS  ELH PNS+LIIL
Sbjct: 492  CDTPEGEACGLVKNLALMTHVTTDEDARPIMSLCYDLGVEDLEQLSAAELHTPNSYLIIL 551

Query: 2165 NGLILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADK 1986
            NGLILGKH+ PQ FA+ MRKLRRAG+I EFVSIFVN+KQ CVYIASDGGRVCRPLVIA+K
Sbjct: 552  NGLILGKHKSPQRFANGMRKLRRAGRIREFVSIFVNDKQCCVYIASDGGRVCRPLVIAEK 611

Query: 1985 GVSRIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEP 1806
            GVSRIKEHHM EL+DGVR F+SFLR+GLIEYLDVNEENN+LIALYE EATP++THIEIEP
Sbjct: 612  GVSRIKEHHMNELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEATPDTTHIEIEP 671

Query: 1805 FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLT 1626
            FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+YLLVYPQRPLLT
Sbjct: 672  FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLLT 731

Query: 1625 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQK 1446
            TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK +AI QK
Sbjct: 732  TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYAAICQK 791

Query: 1445 YENGTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPM 1266
            Y+N TSDR+I+PQR+  + EK QILDDDGLA+PGEIIR   IYINK+SP VT   +TSPM
Sbjct: 792  YKNLTSDRLIKPQRQGSEAEKMQILDDDGLASPGEIIRNRDIYINKESPTVTITQVTSPM 851

Query: 1265 GLPDSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHG 1086
            GLPDSAYK S QTYKG EGE  V+DRVAL SD+NNNL +KFM+R TRRPE+GDKFSSRHG
Sbjct: 852  GLPDSAYKSSRQTYKGTEGEPTVIDRVALHSDENNNLSIKFMIRQTRRPEIGDKFSSRHG 911

Query: 1085 QKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGS 906
            QKGVCG I+QQED PFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGS
Sbjct: 912  QKGVCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGS 971

Query: 905  AFGEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVL 726
            AFGEPSGHAD V+AISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVL
Sbjct: 972  AFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVL 1031

Query: 725  DKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEV 546
            DKMHARGSGPRVM+TRQPTEGRSRNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFE 
Sbjct: 1032 DKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHERLMLSSDPFEA 1091

Query: 545  QVCRKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            QVCRKCGLLGYYNYKLK G+CS CKNGEN+ST+KLPYACKLL QELQSMNIVPRL+LTEA
Sbjct: 1092 QVCRKCGLLGYYNYKLKIGICSMCKNGENMSTLKLPYACKLLFQELQSMNIVPRLKLTEA 1151


>ref|XP_004141655.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Cucumis
            sativus]
          Length = 1158

 Score = 1833 bits (4747), Expect = 0.0
 Identities = 915/1144 (79%), Positives = 1003/1144 (87%), Gaps = 4/1144 (0%)
 Frame = -1

Query: 3785 SQPQWSGIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANN 3606
            S P  S IDKQF+  P+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV TEIKKIV AN+
Sbjct: 19   SNPIDSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKAND 78

Query: 3605 EIRSSKKDENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGS 3426
             I SS  D ++YLR+ DVRIGEPS+ ++ V+E ++PH CRLSD+TYAAPILV IEY   S
Sbjct: 79   RIESST-DPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEES 137

Query: 3425 GQNTSVQMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVIL 3246
                + + KKDVVIGRMPIMLRS CCVL+GKDE ELARLGECPLDPGGYF+IKGTEKV+L
Sbjct: 138  HAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVL 197

Query: 3245 IQEQLSKNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKS-KVPIMV 3069
            IQEQLSKNRIIIDTDKKG +               VIKME EKIYL LN F + K+PIMV
Sbjct: 198  IQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMV 257

Query: 3068 VMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPY 2889
            V+KAMGMES QEVVQMVGRDPRY ALLLPSIEECAK  +YTQ QALEYLE +VK+  +  
Sbjct: 258  VLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFAS 317

Query: 2888 APVEK--RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGN 2715
            AP EK  RAL ILRD+F+AN+PV + NF  KCIYVAVM+RRMM+AIL+KDAMDDKDYVGN
Sbjct: 318  APPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGN 377

Query: 2714 KRXXXXXXXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERT 2535
            KR               FKTM  EV+K +D  L K SRSS FD SQ++  + I+ GLERT
Sbjct: 378  KRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERT 437

Query: 2534 LSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGM 2355
            LSTGNWDVKRFRMHRKGM+QV+ARLS+I T+GH+T++SPQFEKSRKVSGPRALQPSQWGM
Sbjct: 438  LSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGM 497

Query: 2354 LCPCDTPEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFL 2175
            LCPCDTPEGEACGL+KNLALMTHVTTD+EEGP+ISLCY LGVEDLELLS EELH PNSFL
Sbjct: 498  LCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFL 557

Query: 2174 IILNGLILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVI 1995
            +I NG ILGKHRRPQ FA+ MR LRRAGKIGEFVS+FVNEKQHCVYIASDGGRVCRPLVI
Sbjct: 558  VIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVI 617

Query: 1994 ADKGVSRIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIE 1815
            ADKGVSRIKE+HMKEL DGVRTFD FLR+GLIEYLDVNEENNALIALYEGEATPE+THIE
Sbjct: 618  ADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIE 677

Query: 1814 IEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRP 1635
            IEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTL+YLLVYPQRP
Sbjct: 678  IEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRP 737

Query: 1634 LLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAI 1455
            LLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV KK S++
Sbjct: 738  LLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSV 797

Query: 1454 VQKYENGTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPIT 1275
             QKYEN T+DRI+RP R        QILDDDGLAAPGEIIRP+ IY+NKQSPI+T+G   
Sbjct: 798  NQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIITKG--- 854

Query: 1274 SPM-GLPDSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFS 1098
            SP+ G+PD+AY+P  Q +KG EGE  V+DRVAL +DKN+ LC+KF++R TRRPE+GDKFS
Sbjct: 855  SPLPGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFS 914

Query: 1097 SRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRF 918
            SRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRF
Sbjct: 915  SRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRF 974

Query: 917  HYGSAFGEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLK 738
            HYGSAFGEPSGHADKV+AISETL+K GFSYNGKDF+YSGITG PLQAYIFMGPIYYQKLK
Sbjct: 975  HYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLK 1034

Query: 737  HMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSD 558
            HMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIYERLMISSD
Sbjct: 1035 HMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSD 1094

Query: 557  PFEVQVCRKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLR 378
            PFEVQVCR CGLLGYYN+KLKTG+CS+CKNG+NISTMKLPYACKLLIQELQSMNIVPRL+
Sbjct: 1095 PFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLK 1154

Query: 377  LTEA 366
            L EA
Sbjct: 1155 LAEA 1158


>ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Gossypium
            raimondii] gi|763808128|gb|KJB75030.1| hypothetical
            protein B456_012G019600 [Gossypium raimondii]
          Length = 1158

 Score = 1829 bits (4738), Expect = 0.0
 Identities = 911/1137 (80%), Positives = 1005/1137 (88%), Gaps = 4/1137 (0%)
 Frame = -1

Query: 3764 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSKK 3585
            +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+ I S   
Sbjct: 23   VDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSDI- 81

Query: 3584 DENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGS-GQNTSV 3408
            D ++YLR+KDVRIGEPSM +D +TEK++PH CRLS++TYAAPILV IEY  GS GQ T +
Sbjct: 82   DPSIYLRFKDVRIGEPSMTVDGITEKINPHACRLSEMTYAAPILVNIEYIQGSHGQKTRL 141

Query: 3407 QMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLS 3228
            + K D+VIGRMPIMLRSCCCVL GKDE ELARLGECPLDPGGYFVIKGTEKVILIQEQLS
Sbjct: 142  E-KNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLS 200

Query: 3227 KNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGM 3048
            KNRIIID DKKG +               VI+MEKEKIYL LNQF  K+PIMVVMKAMGM
Sbjct: 201  KNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGM 260

Query: 3047 ESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPYAPVEK-- 2874
            ESDQEVVQM+GRDPR+SALLLPSIEECA   +YT+ QAL YL+ + K+  Y  +  ++  
Sbjct: 261  ESDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALAYLDTKAKRPLYASSASDQDG 320

Query: 2873 RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXXX 2694
            RA  ILRD+FIAN+PVR  NFR KC+YVAVMLRRMMEAILNKDAMDDKDYVGNKR     
Sbjct: 321  RAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSG 380

Query: 2693 XXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVK-DSITVGLERTLSTGNW 2517
                      FKT   +V+K++D+ LSKTSRSS  D SQ++ + + IT GLERTLSTGN+
Sbjct: 381  QLISLLFEDLFKTTLAQVKKSIDSVLSKTSRSSALDPSQFLRRMEFITTGLERTLSTGNF 440

Query: 2516 DVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2337
            D++RFRMHRKGMTQV+ARLS+IGTLG MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 441  DIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 500

Query: 2336 PEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGL 2157
            PEGEACGL+KNLALMTHVTTDE+EGP++SLCY LGVEDLELLSGEELH PNSFL++LNGL
Sbjct: 501  PEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLELLSGEELHTPNSFLVMLNGL 560

Query: 2156 ILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVS 1977
            ILGKHRRPQ FA+A+RKLRRAGK+GEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKG+S
Sbjct: 561  ILGKHRRPQHFANALRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGIS 620

Query: 1976 RIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTI 1797
            RIKEHHMKEL DGVRTFD FL +GLIEYLDVNEENNALIALYEGEATPE+THIEIEPFTI
Sbjct: 621  RIKEHHMKELLDGVRTFDDFLSDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTI 680

Query: 1796 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRT 1617
            LGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+YLLVYPQRPLLTTRT
Sbjct: 681  LGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTRT 740

Query: 1616 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYEN 1437
            IELVGYDKLGAGQNATVAV+SYSGYDIEDAIVMNKSSLDRGFGRCIVMKK S ++QKYEN
Sbjct: 741  IELVGYDKLGAGQNATVAVISYSGYDIEDAIVMNKSSLDRGFGRCIVMKKSSNVIQKYEN 800

Query: 1436 GTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGLP 1257
            G +DRI+RPQR     EK  ILDDDG+A+PGEIIRP+ I +NK+ PI TRG   S   LP
Sbjct: 801  GATDRILRPQRTGPGSEKMLILDDDGIASPGEIIRPNDILLNKEVPIHTRGTRVSSDSLP 860

Query: 1256 DSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQKG 1077
            DSAYKP  Q+YKGPEGE+ V+DRV+L +D+N NL +KF++RHTRRPE+GDKFSSRHGQKG
Sbjct: 861  DSAYKPVRQSYKGPEGESCVMDRVSLSTDRNGNLSIKFLIRHTRRPELGDKFSSRHGQKG 920

Query: 1076 VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFG 897
            VCG IIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRFHYGSAFG
Sbjct: 921  VCGIIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 980

Query: 896  EPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKM 717
            EPSGHADKVE ISETLVKHGF YNGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 981  EPSGHADKVETISETLVKHGFCYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1040

Query: 716  HARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVC 537
            HARG+GPRVM+TRQPTEGR+R GGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQVC
Sbjct: 1041 HARGNGPRVMLTRQPTEGRARKGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVC 1100

Query: 536  RKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            RKCGLLGYY++KLKTG+CS+CKNG+++STM+LPYACKLLIQELQSMNIVPRL+L EA
Sbjct: 1101 RKCGLLGYYSHKLKTGICSSCKNGDDVSTMQLPYACKLLIQELQSMNIVPRLKLAEA 1157


>ref|XP_008462447.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Cucumis
            melo]
          Length = 1158

 Score = 1828 bits (4736), Expect = 0.0
 Identities = 912/1144 (79%), Positives = 1002/1144 (87%), Gaps = 4/1144 (0%)
 Frame = -1

Query: 3785 SQPQWSGIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANN 3606
            S P  S IDKQF+  P+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV TEIKKIV AN+
Sbjct: 19   SNPIDSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKAND 78

Query: 3605 EIRSSKKDENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGS 3426
             I SS  D ++YLR+ DVRIGEPS+ ++ V+E ++PH CRLSD+TYAAPILV IEY   S
Sbjct: 79   RIESST-DPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEES 137

Query: 3425 GQNTSVQMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVIL 3246
                + + KKDVVIGRMPIMLRS CCVL+GKDE ELARLGECPLDPGGYF+IKGTEKV+L
Sbjct: 138  HAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVL 197

Query: 3245 IQEQLSKNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKS-KVPIMV 3069
            IQEQLSKNRIIIDTDKKG +               VIKME EKIYL LN F + K+PIMV
Sbjct: 198  IQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMV 257

Query: 3068 VMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPY 2889
            V+KAMGMES QEVVQMVGRDPRY ALLLPSIEECAK  +YTQ QALEYLE +VK+  +  
Sbjct: 258  VLKAMGMESVQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFAS 317

Query: 2888 APVEK--RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGN 2715
            AP EK  RAL ILRD+F+AN+PV + NF  KCIYVAVM+RRMM+AIL+KDAMDDKDYVGN
Sbjct: 318  APPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGN 377

Query: 2714 KRXXXXXXXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERT 2535
            KR               FKTM  EV+K +D  L K SRSS FD SQ++  + I+ GLERT
Sbjct: 378  KRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERT 437

Query: 2534 LSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGM 2355
            LSTGNWDVKRFRMHRKGM+QV+ARLS+I T+GH+T++SPQFEKSRKVSGPRALQPSQWGM
Sbjct: 438  LSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGM 497

Query: 2354 LCPCDTPEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFL 2175
            LCPCDTPEGEACGL+KNLALMTHVTTD+EEGP+ISLCY LGVEDLELLS EELH PNSFL
Sbjct: 498  LCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFL 557

Query: 2174 IILNGLILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVI 1995
            +I NG ILGKHRRPQ FA+ MR LRRAGKIGEFVS+FVNEKQHCVYIASDGGRVCRPLVI
Sbjct: 558  VIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVI 617

Query: 1994 ADKGVSRIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIE 1815
            ADKGVSRI+E+HMKEL DGVRTFD FLR+GLIEYLDVNEENNALIALYEGEATPE+THIE
Sbjct: 618  ADKGVSRIREYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIE 677

Query: 1814 IEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRP 1635
            IEP TILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTL+YLLVYPQRP
Sbjct: 678  IEPLTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRP 737

Query: 1634 LLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAI 1455
            LLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV KK S++
Sbjct: 738  LLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSV 797

Query: 1454 VQKYENGTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPIT 1275
             QKYEN T+DRI+RP R        QILDDDGLAAPGEIIRP+ +Y+NKQSPI+T+G   
Sbjct: 798  NQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDVYVNKQSPIITKG--- 854

Query: 1274 SPM-GLPDSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFS 1098
            SP+ G+PDSAY+P  Q +KG EGE  V+DRVAL +DKN+ LC+KF++R TRRPE+GDKFS
Sbjct: 855  SPLPGIPDSAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFS 914

Query: 1097 SRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRF 918
            SRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRF
Sbjct: 915  SRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRF 974

Query: 917  HYGSAFGEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLK 738
            HYGSAFGEPSGHADKV+AISETL++ GFSYNGKDF+YSGITG PLQAYIFMGPIYYQKLK
Sbjct: 975  HYGSAFGEPSGHADKVDAISETLIERGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLK 1034

Query: 737  HMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSD 558
            HMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIYERLMISSD
Sbjct: 1035 HMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSD 1094

Query: 557  PFEVQVCRKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLR 378
            PFEVQVCR CGLLGYYN+KLKTG+CS+CKNG+NISTMKLPYACKLLIQELQSMNIVPRL+
Sbjct: 1095 PFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLK 1154

Query: 377  LTEA 366
            L EA
Sbjct: 1155 LAEA 1158


>ref|XP_010043725.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Eucalyptus
            grandis]
          Length = 1152

 Score = 1825 bits (4728), Expect = 0.0
 Identities = 916/1156 (79%), Positives = 1003/1156 (86%), Gaps = 12/1156 (1%)
 Frame = -1

Query: 3797 EDLLSQPQWSGIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIV 3618
            EDL ++   + +D + LAAP+KSAVDKFQL+PEFLKVRGLVKQHLDSFNYF  TEIKKIV
Sbjct: 2    EDLRNRSH-ADVDYRKLAAPIKSAVDKFQLVPEFLKVRGLVKQHLDSFNYFANTEIKKIV 60

Query: 3617 HANNEIRSSKKDENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEY 3438
             AN++I SS  D N+Y+R+KDVRIG P+  ++ + E LSP KCRL+D TYAAP+LV +EY
Sbjct: 61   RANDKIVSSV-DPNLYVRFKDVRIGNPTEALEGIVEDLSPQKCRLTDKTYAAPVLVDVEY 119

Query: 3437 TTGSGQNTSVQMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTE 3258
            T GS    S+  K DV I RMPIMLRSCCCVL+ KDE+ELARLGECPLDPGGYFVIKGTE
Sbjct: 120  TKGSHGGYSLLEKNDVTIARMPIMLRSCCCVLFRKDEDELARLGECPLDPGGYFVIKGTE 179

Query: 3257 KVILIQEQLSKNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVP 3078
            KVILIQEQLSKNRIIIDTDKKG +               V+ MEK K+YL LNQF   +P
Sbjct: 180  KVILIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVVVMEKGKMYLQLNQFAKNIP 239

Query: 3077 IMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLP 2898
            IM+VMKAM MESDQEVVQM+GRDPRYSALLL SIEECA  +++TQ QALE+LE ++K+LP
Sbjct: 240  IMIVMKAMRMESDQEVVQMIGRDPRYSALLLQSIEECASLSIFTQQQALEFLEGKLKKLP 299

Query: 2897 YPYAPVEK--RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDY 2724
            Y      K  RA+SILRD+F+AN+ V + NFR KCIYVAVMLRRMMEAILNKDAMDDKDY
Sbjct: 300  YANMSTGKEGRAMSILRDVFLANVRVIKNNFRPKCIYVAVMLRRMMEAILNKDAMDDKDY 359

Query: 2723 VGNKRXXXXXXXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGL 2544
            VGNKR               FKTM  EV+K  D  LSK SRSS  D+S  +VKD IT GL
Sbjct: 360  VGNKRLELSGQLISLLFEDLFKTMISEVQKQADNVLSKRSRSSQLDLSMLLVKDIITQGL 419

Query: 2543 ERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQ 2364
            ER LSTGNWDVKRFRMHRKGMTQV+ARLS+IGTLGH+T+ISPQFEKSRKVSGPRALQPSQ
Sbjct: 420  ERALSTGNWDVKRFRMHRKGMTQVLARLSFIGTLGHVTRISPQFEKSRKVSGPRALQPSQ 479

Query: 2363 WGMLCPCDTPEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPN 2184
            WGMLCPCDTPEGEACGL+KNLALMTHVTTD+EEGP+I+LCY LGVEDLELLSGEELH PN
Sbjct: 480  WGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLIALCYCLGVEDLELLSGEELHTPN 539

Query: 2183 SFLIILNGLILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRP 2004
            SFLII NGLILGKHRRPQ FA+ MRKLRR G+IGEFVS+FVNEKQ CVYIASDGGRVCRP
Sbjct: 540  SFLIIFNGLILGKHRRPQRFANTMRKLRRIGRIGEFVSVFVNEKQCCVYIASDGGRVCRP 599

Query: 2003 LVIADKGVSRIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPEST 1824
            LVIADKG+SRIKEHHMK L DG RTFD FLREGL+EYLDVNEENNALIALYE +ATPE+T
Sbjct: 600  LVIADKGISRIKEHHMKGLLDGARTFDDFLREGLVEYLDVNEENNALIALYEQDATPETT 659

Query: 1823 HIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYP 1644
            HIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+YLLVYP
Sbjct: 660  HIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLLRMDTLLYLLVYP 719

Query: 1643 QRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKM 1464
            QRPLLTTRTIEL GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 
Sbjct: 720  QRPLLTTRTIELTGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKY 779

Query: 1463 SAIVQKYENGTSDRIIRPQR--------ERYDPEKTQILDDDGLAAPGEIIRPDYIYINK 1308
            SA+ QKYENGTSDRI+RP R        E  D E+ QILD+DG+AAPGEIIRP+ +YINK
Sbjct: 780  SAVNQKYENGTSDRILRPPRKDDRNKKGENPDWERMQILDNDGIAAPGEIIRPNDVYINK 839

Query: 1307 QSPIVTRGPITSPM--GLPDSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVR 1134
            +SPI+T+G   +P   GL DS YKPS QT+KG EGE+ V+DRV L SDKN NL +KFM+R
Sbjct: 840  ESPIITKG---NPKLGGLKDSDYKPSRQTFKGAEGESCVVDRVTLSSDKNYNLSIKFMIR 896

Query: 1133 HTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIEL 954
            HTRRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSE GICPDLIMNPHGFPSRMTVGKMIEL
Sbjct: 897  HTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSEHGICPDLIMNPHGFPSRMTVGKMIEL 956

Query: 953  LGSKAGVSCGRFHYGSAFGEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAY 774
            LG KAGVSCGRFHYGSAFGEPSGHAD+VEAISETLVKHGFSYNGKDF+YSGITG PLQAY
Sbjct: 957  LGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLVKHGFSYNGKDFLYSGITGCPLQAY 1016

Query: 773  IFMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGAS 594
            IFMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEGR+RNGGLRVGEMERDCLIAYGAS
Sbjct: 1017 IFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGAS 1076

Query: 593  MLIYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQ 414
            MLIYERLM+SSDPFEVQVCR CGLLGYYNYKLKTG+CS+CKNG+NISTMKLPYACKLLIQ
Sbjct: 1077 MLIYERLMLSSDPFEVQVCRACGLLGYYNYKLKTGICSSCKNGDNISTMKLPYACKLLIQ 1136

Query: 413  ELQSMNIVPRLRLTEA 366
            ELQSMNIVPRLRL ++
Sbjct: 1137 ELQSMNIVPRLRLADS 1152


>gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium raimondii]
          Length = 1159

 Score = 1824 bits (4724), Expect = 0.0
 Identities = 910/1138 (79%), Positives = 1005/1138 (88%), Gaps = 5/1138 (0%)
 Frame = -1

Query: 3764 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSKK 3585
            +DKQ LAAP+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+ I S   
Sbjct: 23   VDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSDI- 81

Query: 3584 DENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGS-GQNTSV 3408
            D ++YLR+KDVRIGEPSM +D +TEK++PH CRLS++TYAAPILV IEY  GS GQ T +
Sbjct: 82   DPSIYLRFKDVRIGEPSMTVDGITEKINPHACRLSEMTYAAPILVNIEYIQGSHGQKTRL 141

Query: 3407 QMKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLS 3228
            + K D+VIGRMPIMLRSCCCVL GKDE ELARLGECPLDPGGYFVIKGTEKVILIQEQLS
Sbjct: 142  E-KNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLS 200

Query: 3227 KNRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGM 3048
            KNRIIID DKKG +               VI+MEKEKIYL LNQF  K+PIMVVMKAMGM
Sbjct: 201  KNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGM 260

Query: 3047 ESDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPYAPVEK-- 2874
            ESDQEVVQM+GRDPR+SALLLPSIEECA   +YT+ QAL YL+ + K+  Y  +  ++  
Sbjct: 261  ESDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALAYLDTKAKRPLYASSASDQDG 320

Query: 2873 RALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXXX 2694
            RA  ILRD+FIAN+PVR  NFR KC+YVAVMLRRMMEAILNKDAMDDKDYVGNKR     
Sbjct: 321  RAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSG 380

Query: 2693 XXXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVK-DSITVGLERTLSTGNW 2517
                      FKT   +V+K++D+ LSKTSRSS  D SQ++ + + IT GLERTLSTGN+
Sbjct: 381  QLISLLFEDLFKTTLAQVKKSIDSVLSKTSRSSALDPSQFLRRMEFITTGLERTLSTGNF 440

Query: 2516 DVKRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2337
            D++RFRMHRKGMTQV+ARLS+IGTLG MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 441  DIQRFRMHRKGMTQVLARLSFIGTLGFMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 500

Query: 2336 PEGEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGL 2157
            PEGEACGL+KNLALMTHVTTDE+EGP++SLCY LGVEDLELLSGEELH PNSFL++LNGL
Sbjct: 501  PEGEACGLVKNLALMTHVTTDEDEGPLVSLCYCLGVEDLELLSGEELHTPNSFLVMLNGL 560

Query: 2156 ILGKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVS 1977
            ILGKHRRPQ FA+A+RKLRRAGK+GEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKG+S
Sbjct: 561  ILGKHRRPQHFANALRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGIS 620

Query: 1976 RIKEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTI 1797
            RIKEHHMKEL DGVRTFD FL +GLIEYLDVNEENNALIALYEGEATPE+THIEIEPFTI
Sbjct: 621  RIKEHHMKELLDGVRTFDDFLSDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTI 680

Query: 1796 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRT 1617
            LGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+YLLVYPQRPLLTTRT
Sbjct: 681  LGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTRT 740

Query: 1616 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSA-IVQKYE 1440
            IELVGYDKLGAGQNATVAV+SYSGYDIEDAIVMNKSSLDRGFGRCIVMK  S+ ++QKYE
Sbjct: 741  IELVGYDKLGAGQNATVAVISYSGYDIEDAIVMNKSSLDRGFGRCIVMKNRSSNVIQKYE 800

Query: 1439 NGTSDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGL 1260
            NG +DRI+RPQR     EK  ILDDDG+A+PGEIIRP+ I +NK+ PI TRG   S   L
Sbjct: 801  NGATDRILRPQRTGPGSEKMLILDDDGIASPGEIIRPNDILLNKEVPIHTRGTRVSSDSL 860

Query: 1259 PDSAYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQK 1080
            PDSAYKP  Q+YKGPEGE+ V+DRV+L +D+N NL +KF++RHTRRPE+GDKFSSRHGQK
Sbjct: 861  PDSAYKPVRQSYKGPEGESCVMDRVSLSTDRNGNLSIKFLIRHTRRPELGDKFSSRHGQK 920

Query: 1079 GVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 900
            GVCG IIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRFHYGSAF
Sbjct: 921  GVCGIIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 980

Query: 899  GEPSGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK 720
            GEPSGHADKVE ISETLVKHGF YNGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDK
Sbjct: 981  GEPSGHADKVETISETLVKHGFCYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1040

Query: 719  MHARGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 540
            MHARG+GPRVM+TRQPTEGR+R GGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQV
Sbjct: 1041 MHARGNGPRVMLTRQPTEGRARKGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQV 1100

Query: 539  CRKCGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            CRKCGLLGYY++KLKTG+CS+CKNG+++STM+LPYACKLLIQELQSMNIVPRL+L EA
Sbjct: 1101 CRKCGLLGYYSHKLKTGICSSCKNGDDVSTMQLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_012068721.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Jatropha
            curcas] gi|643733723|gb|KDP40566.1| hypothetical protein
            JCGZ_24565 [Jatropha curcas]
          Length = 1152

 Score = 1821 bits (4716), Expect = 0.0
 Identities = 902/1135 (79%), Positives = 995/1135 (87%), Gaps = 2/1135 (0%)
 Frame = -1

Query: 3764 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVHANNEIRSSKK 3585
            IDKQ L AP+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV   IKKIV AN+ I SS  
Sbjct: 22   IDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVSSL- 80

Query: 3584 DENVYLRYKDVRIGEPSMMIDNVTEKLSPHKCRLSDVTYAAPILVTIEYTTGSGQNTSVQ 3405
            D  +YLR+KDVRIG PS+++D V+E+LSPH CRL+D+TYAAPI+V +EY  GS    +  
Sbjct: 81   DPGIYLRFKDVRIGTPSVIVDGVSEQLSPHMCRLADMTYAAPIMVNVEYIQGSHDQKTRV 140

Query: 3404 MKKDVVIGRMPIMLRSCCCVLYGKDEEELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 3225
             K DVVIGRMPIMLRS  CVLYGKDE ELARLGECPLDPGGYF+IKGTEKVILIQEQLSK
Sbjct: 141  EKNDVVIGRMPIMLRSRGCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 200

Query: 3224 NRIIIDTDKKGCVQXXXXXXXXXXXXXXVIKMEKEKIYLYLNQFKSKVPIMVVMKAMGME 3045
            NRIIID DKKG +               +I+MEKEK+YL LNQF  K+PIMVVMKAMGME
Sbjct: 201  NRIIIDNDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFAKKIPIMVVMKAMGME 260

Query: 3044 SDQEVVQMVGRDPRYSALLLPSIEECAKANVYTQHQALEYLEKQVKQLPYPYAPV--EKR 2871
            SDQEVVQM+GRDPRYSALLLPSIEECA  N+YTQ +ALEYLE +VK   Y  +    E R
Sbjct: 261  SDQEVVQMLGRDPRYSALLLPSIEECASLNIYTQQKALEYLEGKVKMPTYFSSSYVKENR 320

Query: 2870 ALSILRDIFIANIPVRQYNFRSKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRXXXXXX 2691
            AL ILRD+F+AN+PV + NFR KC+YVAVMLRRMMEA+LNKDAMDDKDYVGNKR      
Sbjct: 321  ALGILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELSGQ 380

Query: 2690 XXXXXXXXXFKTMNDEVRKNVDATLSKTSRSSLFDMSQYVVKDSITVGLERTLSTGNWDV 2511
                     FKTM  EV++ +DA LSK +RSS FD++QY+V+DSIT GLERTLSTGN+DV
Sbjct: 381  LISLLFEDLFKTMITEVQRTIDAVLSKPNRSSRFDLAQYLVRDSITNGLERTLSTGNFDV 440

Query: 2510 KRFRMHRKGMTQVVARLSYIGTLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2331
            KRFRMHRKGMTQV+ RLS+I +LG MT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 441  KRFRMHRKGMTQVLVRLSFIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 500

Query: 2330 GEACGLMKNLALMTHVTTDEEEGPIISLCYSLGVEDLELLSGEELHMPNSFLIILNGLIL 2151
            GEACGL+KNLALMTHVTTDEEEGP+ISLCY LGVEDLELLSGEELH PNSFL+I NGLIL
Sbjct: 501  GEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVICNGLIL 560

Query: 2150 GKHRRPQSFASAMRKLRRAGKIGEFVSIFVNEKQHCVYIASDGGRVCRPLVIADKGVSRI 1971
            GKHRRPQ FA+A+RKLRRAGKIGEFVS+FVNEKQH VYIASDGGRVCRPLVIADKGVSRI
Sbjct: 561  GKHRRPQHFANALRKLRRAGKIGEFVSVFVNEKQHAVYIASDGGRVCRPLVIADKGVSRI 620

Query: 1970 KEHHMKELKDGVRTFDSFLREGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTILG 1791
            KEHHMKEL DGVRTFD FLREGLIEYLDVNEENNALIALYEGEATPE+THIEIEPFTILG
Sbjct: 621  KEHHMKELLDGVRTFDDFLREGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTILG 680

Query: 1790 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLIYLLVYPQRPLLTTRTIE 1611
            VCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+L+YLLVYPQRPLLTTRTIE
Sbjct: 681  VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLTTRTIE 740

Query: 1610 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKMSAIVQKYENGT 1431
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCI++KK +A +QKYENG 
Sbjct: 741  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCILLKKYTATIQKYENGA 800

Query: 1430 SDRIIRPQRERYDPEKTQILDDDGLAAPGEIIRPDYIYINKQSPIVTRGPITSPMGLPDS 1251
             DRI+RP++     EK ++LD DG+AAPGEIIR + IYINK+ P+ TRGP+ S   L D 
Sbjct: 801  EDRIVRPRKTE---EKERLLDYDGMAAPGEIIRANDIYINKECPVETRGPLKSAAALADM 857

Query: 1250 AYKPSIQTYKGPEGETAVLDRVALCSDKNNNLCVKFMVRHTRRPEVGDKFSSRHGQKGVC 1071
             YKPS   YK  EGE+ V+DRVALCSD+NNN C+KF++RHTRRPE+GDKFSSRHGQKGVC
Sbjct: 858  KYKPSYNAYKYTEGESCVVDRVALCSDRNNNFCIKFIIRHTRRPELGDKFSSRHGQKGVC 917

Query: 1070 GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGEP 891
            G II QEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVSCGRFHYGSAFGEP
Sbjct: 918  GVIIPQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP 977

Query: 890  SGHADKVEAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKMHA 711
            SGHAD+VE IS+TLV  GFSYNGKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLDK+HA
Sbjct: 978  SGHADRVETISQTLVDRGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKIHA 1037

Query: 710  RGSGPRVMITRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRK 531
            RGSGPR ++TRQPTEGR++NGGLRVGEMERDCLIAYGASMLI+ERLMISSDPFEVQVCR 
Sbjct: 1038 RGSGPRTLLTRQPTEGRAKNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRV 1097

Query: 530  CGLLGYYNYKLKTGVCSTCKNGENISTMKLPYACKLLIQELQSMNIVPRLRLTEA 366
            CGLLGY+N KL++G+CSTCKNG+NISTMKLPYACKLL+QELQSMNI+PRL+L EA
Sbjct: 1098 CGLLGYFNQKLRSGICSTCKNGDNISTMKLPYACKLLLQELQSMNIIPRLKLDEA 1152