BLASTX nr result
ID: Gardenia21_contig00008738
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00008738
(789 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP14566.1| unnamed protein product [Coffea canephora] 306 1e-80
ref|XP_008225401.1| PREDICTED: pentatricopeptide repeat-containi... 170 1e-39
ref|XP_008225398.1| PREDICTED: pentatricopeptide repeat-containi... 170 1e-39
ref|XP_013727783.1| PREDICTED: pentatricopeptide repeat-containi... 168 3e-39
ref|XP_013597274.1| PREDICTED: pentatricopeptide repeat-containi... 166 1e-38
ref|XP_013719454.1| PREDICTED: pentatricopeptide repeat-containi... 166 2e-38
ref|XP_007211999.1| hypothetical protein PRUPE_ppa011078mg [Prun... 166 2e-38
ref|XP_009360801.1| PREDICTED: pentatricopeptide repeat-containi... 164 7e-38
ref|XP_009132407.1| PREDICTED: pentatricopeptide repeat-containi... 163 1e-37
ref|XP_006355563.1| PREDICTED: pentatricopeptide repeat-containi... 162 2e-37
ref|XP_002526919.1| conserved hypothetical protein [Ricinus comm... 162 3e-37
ref|XP_010439785.1| PREDICTED: pentatricopeptide repeat-containi... 161 6e-37
ref|XP_010439783.1| PREDICTED: pentatricopeptide repeat-containi... 161 6e-37
ref|XP_008383533.1| PREDICTED: pentatricopeptide repeat-containi... 161 6e-37
ref|XP_007025241.1| Pentatricopeptide repeat superfamily protein... 160 1e-36
ref|XP_002867967.1| hypothetical protein ARALYDRAFT_914772 [Arab... 160 1e-36
ref|XP_009604274.1| PREDICTED: pentatricopeptide repeat-containi... 160 1e-36
ref|NP_001031667.1| pentatricopeptide repeat-containing protein ... 159 2e-36
ref|NP_567571.1| pentatricopeptide repeat-containing protein [Ar... 159 2e-36
emb|CAA16754.1| putative protein [Arabidopsis thaliana] gi|72686... 159 2e-36
>emb|CDP14566.1| unnamed protein product [Coffea canephora]
Length = 296
Score = 306 bits (783), Expect = 1e-80
Identities = 157/193 (81%), Positives = 166/193 (86%), Gaps = 1/193 (0%)
Frame = -1
Query: 576 MKNPFSSTIQVPAQFPLHRHK-MWSTRVNPLLHFKFVNCSSFSMQKVSSVISCAEKARRT 400
MK+P S TIQVP Q PLHR K MWSTRVNPLLHFKFVNCS FSMQ+VSSVI+ AEKARRT
Sbjct: 1 MKSPVSCTIQVPVQLPLHRPKEMWSTRVNPLLHFKFVNCSFFSMQEVSSVITRAEKARRT 60
Query: 399 TAVSDTSSPEDASGYGSFDRKSTKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLP 220
V+DT+SPED YGSFDRKSTKMVRKMGKKEHHLWQKRDSARSGQKAL+LV+ ISGLP
Sbjct: 61 V-VNDTNSPEDVCEYGSFDRKSTKMVRKMGKKEHHLWQKRDSARSGQKALNLVRNISGLP 119
Query: 219 NEKEAVYGALNKWVAWEAEFPXXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTY 40
NEKEAVYGAL+KW+AWEAEFP KSQWVRVIQVAKWMLSKGQGTTMTTY
Sbjct: 120 NEKEAVYGALDKWIAWEAEFPLIAAAKALRILRKKSQWVRVIQVAKWMLSKGQGTTMTTY 179
Query: 39 DSLLLAFDMDCRI 1
DSLLLAFDMDCRI
Sbjct: 180 DSLLLAFDMDCRI 192
>ref|XP_008225401.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic isoform X2 [Prunus mume]
Length = 235
Score = 170 bits (430), Expect = 1e-39
Identities = 93/180 (51%), Positives = 117/180 (65%), Gaps = 1/180 (0%)
Frame = -1
Query: 537 QFPLHR-HKMWSTRVNPLLHFKFVNCSSFSMQKVSSVISCAEKARRTTAVSDTSSPEDAS 361
QFPL +M +T L F F NC + + K +S+ S S + +
Sbjct: 12 QFPLPGIDQMKTTEAALSLGFGFSNCRTSLLWKRNSLHQTVSINAFNVKCSFKQSRQPLT 71
Query: 360 GYGSFDRKSTKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKW 181
+ ++K+ ++K+G+KEHHLWQKRDSA SGQKA++LV+I+SGLPNEKE VYGAL+KW
Sbjct: 72 SPKAIEKKT---IKKVGRKEHHLWQKRDSAGSGQKAINLVRIVSGLPNEKETVYGALDKW 128
Query: 180 VAWEAEFPXXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCRI 1
AWEAEFP +SQWVRVIQVAKWMLSKGQG TM TYD+LLLAFDMD R+
Sbjct: 129 TAWEAEFPLIAAVKALRILRKRSQWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDQRV 188
>ref|XP_008225398.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic isoform X1 [Prunus mume]
gi|645237848|ref|XP_008225400.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic isoform X1 [Prunus mume]
Length = 298
Score = 170 bits (430), Expect = 1e-39
Identities = 93/180 (51%), Positives = 117/180 (65%), Gaps = 1/180 (0%)
Frame = -1
Query: 537 QFPLHR-HKMWSTRVNPLLHFKFVNCSSFSMQKVSSVISCAEKARRTTAVSDTSSPEDAS 361
QFPL +M +T L F F NC + + K +S+ S S + +
Sbjct: 12 QFPLPGIDQMKTTEAALSLGFGFSNCRTSLLWKRNSLHQTVSINAFNVKCSFKQSRQPLT 71
Query: 360 GYGSFDRKSTKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKW 181
+ ++K+ ++K+G+KEHHLWQKRDSA SGQKA++LV+I+SGLPNEKE VYGAL+KW
Sbjct: 72 SPKAIEKKT---IKKVGRKEHHLWQKRDSAGSGQKAINLVRIVSGLPNEKETVYGALDKW 128
Query: 180 VAWEAEFPXXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCRI 1
AWEAEFP +SQWVRVIQVAKWMLSKGQG TM TYD+LLLAFDMD R+
Sbjct: 129 TAWEAEFPLIAAVKALRILRKRSQWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDQRV 188
>ref|XP_013727783.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Brassica napus]
gi|674954437|emb|CDX78910.1| BnaA01g09770D [Brassica
napus]
Length = 283
Score = 168 bits (426), Expect = 3e-39
Identities = 96/173 (55%), Positives = 114/173 (65%), Gaps = 9/173 (5%)
Frame = -1
Query: 495 NPLLHFKFVNCSSFSMQKVSSVI-----SCAEKARRTTAV----SDTSSPEDASGYGSFD 343
NP+L +F S QK+SS SC R + S+T + E YG+
Sbjct: 7 NPIL-VRFPLQGSSKSQKISSFSFLESPSCLRAKRFGLCIRAKFSETQAGEVKGSYGAIV 65
Query: 342 RKSTKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEAE 163
++ K V+K+GK EHHLW+K DSA SGQKAL+LV+++SGLPNEKEAVYGALNKWVAWEAE
Sbjct: 66 KR--KEVKKVGKNEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEAE 123
Query: 162 FPXXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCR 4
FP +SQW RVIQVAKWMLSKGQG TM TYD+LLLAFDMD R
Sbjct: 124 FPIVAAAKALQILRKRSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDER 176
>ref|XP_013597274.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic [Brassica oleracea var. oleracea]
Length = 275
Score = 166 bits (421), Expect = 1e-38
Identities = 94/169 (55%), Positives = 114/169 (67%), Gaps = 5/169 (2%)
Frame = -1
Query: 495 NPLLHFKFVNCSSFSMQKVSSVISCAEKARR-----TTAVSDTSSPEDASGYGSFDRKST 331
NP+L +F S Q+ SS + KA+R T S+T + E YG+ ++
Sbjct: 7 NPIL-VRFPLQGSSKSQEFSSCL----KAKRFGLCIRTKFSETQAGEVKGSYGAIVKR-- 59
Query: 330 KMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEAEFPXX 151
K V+K+GK EHHLW+K DSA SGQKAL+LV+++SGLPNEKEAVYGALNKWVAWE EFP
Sbjct: 60 KKVKKVGKNEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIV 119
Query: 150 XXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCR 4
+SQW RVIQVAKWMLSKGQG TM TYD+LLLAFDM+ R
Sbjct: 120 AAAKALQILRKRSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMEER 168
>ref|XP_013719454.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Brassica napus]
gi|674933951|emb|CDX99405.1| BnaC01g11470D [Brassica
napus]
Length = 283
Score = 166 bits (419), Expect = 2e-38
Identities = 91/158 (57%), Positives = 109/158 (68%), Gaps = 5/158 (3%)
Frame = -1
Query: 462 SSFSMQKVSSVISCAEKARR-----TTAVSDTSSPEDASGYGSFDRKSTKMVRKMGKKEH 298
SSFS + SS + KA+R S+T + E YG+ ++ K V+K+GK EH
Sbjct: 25 SSFSFLEFSSCL----KAKRFGLCIRAKFSETQAGEVKGSYGAIVKR--KEVKKVGKNEH 78
Query: 297 HLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEAEFPXXXXXXXXXXXXX 118
HLW+K DSA SGQKAL+LV+++SGLPNEKEAVYGALNKWVAWE EFP
Sbjct: 79 HLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIVAAAKALQILRK 138
Query: 117 KSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCR 4
+SQW RVIQVAKWMLSKGQG TM TYD+LLLAFDM+ R
Sbjct: 139 RSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMEER 176
>ref|XP_007211999.1| hypothetical protein PRUPE_ppa011078mg [Prunus persica]
gi|462407864|gb|EMJ13198.1| hypothetical protein
PRUPE_ppa011078mg [Prunus persica]
Length = 224
Score = 166 bits (419), Expect = 2e-38
Identities = 79/113 (69%), Positives = 90/113 (79%)
Frame = -1
Query: 339 KSTKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEAEF 160
K K ++K+G+KEHHLWQKRDSA SGQKAL+LV+I+SGLPNEKE VYGAL+KW AWE EF
Sbjct: 2 KCRKTIKKVGRKEHHLWQKRDSAGSGQKALNLVRIVSGLPNEKETVYGALDKWTAWETEF 61
Query: 159 PXXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCRI 1
P +SQWVRVIQVAKWMLSKGQG TM TYD+LLLAFDMD R+
Sbjct: 62 PLIAAVKALRILRKRSQWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDQRV 114
>ref|XP_009360801.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Pyrus x bretschneideri]
Length = 299
Score = 164 bits (415), Expect = 7e-38
Identities = 90/187 (48%), Positives = 116/187 (62%), Gaps = 5/187 (2%)
Frame = -1
Query: 546 VPAQFPLHR-HKMWSTRVNPLLHFKFVNCSSFSMQKVSSVISCAEKARRTTAVSDT---- 382
+ QFP+ ++ +T LL F + NC + + K + V +T A+ +
Sbjct: 9 IRCQFPISGIDQITTTEATLLLGFGYSNCKTSLLWKKNYV-------HQTVAIHTSNVKF 61
Query: 381 SSPEDASGYGSFDRKSTKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAV 202
S + S K+++K GKKEHHLWQK+DSA SGQKAL+LV+I+S LPNEKE +
Sbjct: 62 SHKQSRQPLPSSKTTEKKIIKKAGKKEHHLWQKKDSAGSGQKALNLVRIVSSLPNEKETM 121
Query: 201 YGALNKWVAWEAEFPXXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLA 22
+GAL+KW AWE EFP +SQWVRVIQVAKWMLSKGQG TM TYD+LLLA
Sbjct: 122 FGALDKWTAWETEFPLIAAAKALIILRKRSQWVRVIQVAKWMLSKGQGATMGTYDTLLLA 181
Query: 21 FDMDCRI 1
FDMD R+
Sbjct: 182 FDMDQRV 188
>ref|XP_009132407.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic [Brassica rapa]
Length = 283
Score = 163 bits (413), Expect = 1e-37
Identities = 82/129 (63%), Positives = 97/129 (75%)
Frame = -1
Query: 390 SDTSSPEDASGYGSFDRKSTKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEK 211
S+T + E YG+ ++ K V+K+GK EHHLW+K DSA SGQKAL+LV+++SGLPN+K
Sbjct: 50 SETQAGEVKGSYGAIVKR--KEVKKVGKNEHHLWKKNDSAGSGQKALNLVRMLSGLPNDK 107
Query: 210 EAVYGALNKWVAWEAEFPXXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSL 31
EAVYGALNKWVAWE EFP +SQW RVIQVAKWMLSKGQG TM TYD+L
Sbjct: 108 EAVYGALNKWVAWEVEFPIVAAAKALQILRKRSQWHRVIQVAKWMLSKGQGATMGTYDTL 167
Query: 30 LLAFDMDCR 4
LLAFDMD R
Sbjct: 168 LLAFDMDER 176
>ref|XP_006355563.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X1 [Solanum tuberosum]
gi|565378234|ref|XP_006355564.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X2 [Solanum tuberosum]
gi|565378236|ref|XP_006355565.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X3 [Solanum tuberosum]
Length = 265
Score = 162 bits (411), Expect = 2e-37
Identities = 88/162 (54%), Positives = 111/162 (68%)
Frame = -1
Query: 486 LHFKFVNCSSFSMQKVSSVISCAEKARRTTAVSDTSSPEDASGYGSFDRKSTKMVRKMGK 307
L F F +C+ ++ ++S ++K T+A+ D+ + S S D K V+K GK
Sbjct: 5 LQFHFFSCNIL-LKGINST-GLSDKLNVTSALKDSKKQGELSLTIS-DTADQKKVQKAGK 61
Query: 306 KEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEAEFPXXXXXXXXXX 127
EHHLW+KR+SA SGQKAL+LV+IISGLPNEKE+VYGAL+KW+AWEAEFP
Sbjct: 62 VEHHLWKKRESAGSGQKALNLVRIISGLPNEKESVYGALDKWIAWEAEFPLIAAAKALRI 121
Query: 126 XXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCRI 1
+ W RVIQVAKWMLSKGQG TM TYD+LLLAFDMD R+
Sbjct: 122 LRQQRLWKRVIQVAKWMLSKGQGATMATYDALLLAFDMDNRV 163
>ref|XP_002526919.1| conserved hypothetical protein [Ricinus communis]
gi|223533738|gb|EEF35472.1| conserved hypothetical
protein [Ricinus communis]
Length = 224
Score = 162 bits (409), Expect = 3e-37
Identities = 78/115 (67%), Positives = 90/115 (78%)
Frame = -1
Query: 345 DRKSTKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEA 166
D KS K V+K GK+EHHLW+KRDSARSG+KALSLV+I+ LP+EKE VYGAL+KW AWE
Sbjct: 6 DDKSRKPVKKAGKEEHHLWKKRDSARSGEKALSLVRIVCELPDEKECVYGALDKWTAWET 65
Query: 165 EFPXXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCRI 1
EFP +QW+RVIQVAKWMLSKGQGTTM TYD+LLLAFDMD R+
Sbjct: 66 EFPLIAVAKGLRILRKHNQWLRVIQVAKWMLSKGQGTTMGTYDTLLLAFDMDNRV 120
>ref|XP_010439785.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X2 [Camelina sativa]
gi|727529332|ref|XP_010439786.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X2 [Camelina sativa]
Length = 260
Score = 161 bits (407), Expect = 6e-37
Identities = 81/119 (68%), Positives = 92/119 (77%)
Frame = -1
Query: 360 GYGSFDRKSTKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKW 181
GYG+ + K V+K+GK EHHLW+K DSA SGQKAL+LV+++SGLPNEKEAVYGALNKW
Sbjct: 38 GYGATVER--KEVKKVGKNEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKW 95
Query: 180 VAWEAEFPXXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCR 4
VAWE EFP +SQW RVIQVAKWMLSKGQG TM TYD+LLLAFDMD R
Sbjct: 96 VAWEVEFPIIAAAKALQILRKRSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDER 154
>ref|XP_010439783.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X1 [Camelina sativa]
gi|727529326|ref|XP_010439784.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X1 [Camelina sativa]
Length = 287
Score = 161 bits (407), Expect = 6e-37
Identities = 81/119 (68%), Positives = 92/119 (77%)
Frame = -1
Query: 360 GYGSFDRKSTKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKW 181
GYG+ + K V+K+GK EHHLW+K DSA SGQKAL+LV+++SGLPNEKEAVYGALNKW
Sbjct: 65 GYGATVER--KEVKKVGKNEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKW 122
Query: 180 VAWEAEFPXXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCR 4
VAWE EFP +SQW RVIQVAKWMLSKGQG TM TYD+LLLAFDMD R
Sbjct: 123 VAWEVEFPIIAAAKALQILRKRSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDER 181
>ref|XP_008383533.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Malus domestica]
Length = 299
Score = 161 bits (407), Expect = 6e-37
Identities = 89/187 (47%), Positives = 114/187 (60%), Gaps = 5/187 (2%)
Frame = -1
Query: 546 VPAQFPLHR-HKMWSTRVNPLLHFKFVNCSSFSMQKVSSVISCAEKARRTTAVSDT---- 382
+ QFPL ++ +T LL F F NC + + K + V +T A+ +
Sbjct: 9 IRCQFPLSGIDQITTTEAALLLGFGFPNCKTSLLWKKNYV-------HQTVAIHTSNVKF 61
Query: 381 SSPEDASGYGSFDRKSTKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAV 202
S + S K+++K GKK HHLWQK+DSA SGQKA++LV+I+S LPNEKE +
Sbjct: 62 SYKQSRQXLTSSKTTEKKIIKKAGKKXHHLWQKKDSAGSGQKAJNLVRIVSSLPNEKETI 121
Query: 201 YGALNKWVAWEAEFPXXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLA 22
+GAL+KW AWE FP +SQWVRVIQVAKWMLSKGQG TM TYD+LLLA
Sbjct: 122 FGALDKWTAWETXFPLIAAAKALIILRKRSQWVRVIQVAKWMLSKGQGATMGTYDTLLLA 181
Query: 21 FDMDCRI 1
FDMD R+
Sbjct: 182 FDMDQRV 188
>ref|XP_007025241.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508780607|gb|EOY27863.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 276
Score = 160 bits (405), Expect = 1e-36
Identities = 87/158 (55%), Positives = 105/158 (66%)
Frame = -1
Query: 474 FVNCSSFSMQKVSSVISCAEKARRTTAVSDTSSPEDASGYGSFDRKSTKMVRKMGKKEHH 295
F+ S FS+ ++S V C++K + G + K V+K+GK EHH
Sbjct: 28 FLLDSGFSICRISYV-KCSQKLGEQSL-------------GISEAVEKKPVKKVGKNEHH 73
Query: 294 LWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEAEFPXXXXXXXXXXXXXK 115
LW+KRDSA SGQKAL+LV+IIS LPNEKEAVYGAL+KW AWE EFP +
Sbjct: 74 LWKKRDSAGSGQKALNLVRIISQLPNEKEAVYGALDKWTAWETEFPLIAAAKALRILRKR 133
Query: 114 SQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCRI 1
SQW+RVIQVAKWMLSKGQG TM TYD+LLLAFDMD R+
Sbjct: 134 SQWLRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRV 171
>ref|XP_002867967.1| hypothetical protein ARALYDRAFT_914772 [Arabidopsis lyrata subsp.
lyrata] gi|297313803|gb|EFH44226.1| hypothetical protein
ARALYDRAFT_914772 [Arabidopsis lyrata subsp. lyrata]
Length = 284
Score = 160 bits (405), Expect = 1e-36
Identities = 84/158 (53%), Positives = 102/158 (64%)
Frame = -1
Query: 477 KFVNCSSFSMQKVSSVISCAEKARRTTAVSDTSSPEDASGYGSFDRKSTKMVRKMGKKEH 298
+F +C S+S K C + E +G ++ ++K+GKKEH
Sbjct: 31 EFPSCGSYSKLKTKRFGFCIR----------SKFSEKQAGKLDVATVNSNEIKKVGKKEH 80
Query: 297 HLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEAEFPXXXXXXXXXXXXX 118
HLW+K DSA SGQKAL+LV+++SGLPNEKEAVYGALNKWVAWE EFP
Sbjct: 81 HLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRK 140
Query: 117 KSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCR 4
+SQW RVIQ+AKWMLSKGQG TM TYD+LLLAFDMD R
Sbjct: 141 RSQWHRVIQLAKWMLSKGQGATMGTYDTLLLAFDMDQR 178
>ref|XP_009604274.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic isoform X1 [Nicotiana tomentosiformis]
gi|697190422|ref|XP_009604275.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic isoform X1 [Nicotiana tomentosiformis]
gi|697190424|ref|XP_009604276.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic isoform X1 [Nicotiana tomentosiformis]
Length = 276
Score = 160 bits (404), Expect = 1e-36
Identities = 85/170 (50%), Positives = 109/170 (64%), Gaps = 8/170 (4%)
Frame = -1
Query: 486 LHFKFVNCS-------SFSMQKVSSVISCAEKARRTTAVSDT-SSPEDASGYGSFDRKST 331
L F+F NC+ S + K ++ S + +++ +S T S D G +
Sbjct: 5 LQFEFFNCNLLLKGINSTRLSKKLNITSAVKHSQKQGELSLTISDVADQKGLSETTSLPS 64
Query: 330 KMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEAEFPXX 151
+ V+K GK EHHLW+KR+SA SGQKAL+LV++ISGLPNEKE+VY AL+KW+AWE EFP
Sbjct: 65 RKVQKAGKVEHHLWKKRESAGSGQKALNLVRLISGLPNEKESVYRALDKWIAWETEFPLI 124
Query: 150 XXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCRI 1
+ W RVIQVAKWMLSKGQG TM TYD+LLLAFDMD R+
Sbjct: 125 AAAKALSILRQQRMWKRVIQVAKWMLSKGQGATMATYDTLLLAFDMDKRV 174
>ref|NP_001031667.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658716|gb|AEE84116.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 260
Score = 159 bits (403), Expect = 2e-36
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = -1
Query: 336 STKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEAEFP 157
++K ++K+GKKEHHLW+K DSA SGQKAL+LV+++SGLPNEKEAVYGALNKWVAWE EFP
Sbjct: 44 NSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFP 103
Query: 156 XXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCR 4
+SQW RVIQ+AKWMLSKGQG TM TYD LLLAFDMD R
Sbjct: 104 IIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDER 154
>ref|NP_567571.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|186512032|ref|NP_001119009.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|334186688|ref|NP_001190768.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|223635632|sp|Q2V3H0.2|PP322_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g18975, chloroplastic; Flags: Precursor
gi|332658715|gb|AEE84115.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332658717|gb|AEE84117.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332658718|gb|AEE84118.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 287
Score = 159 bits (403), Expect = 2e-36
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = -1
Query: 336 STKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEAEFP 157
++K ++K+GKKEHHLW+K DSA SGQKAL+LV+++SGLPNEKEAVYGALNKWVAWE EFP
Sbjct: 71 NSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFP 130
Query: 156 XXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCR 4
+SQW RVIQ+AKWMLSKGQG TM TYD LLLAFDMD R
Sbjct: 131 IIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDER 181
>emb|CAA16754.1| putative protein [Arabidopsis thaliana] gi|7268691|emb|CAB78899.1|
putative protein [Arabidopsis thaliana]
Length = 626
Score = 159 bits (403), Expect = 2e-36
Identities = 77/111 (69%), Positives = 89/111 (80%)
Frame = -1
Query: 336 STKMVRKMGKKEHHLWQKRDSARSGQKALSLVQIISGLPNEKEAVYGALNKWVAWEAEFP 157
++K ++K+GKKEHHLW+K DSA SGQKAL+LV+++SGLPNEKEAVYGALNKWVAWE EFP
Sbjct: 44 NSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFP 103
Query: 156 XXXXXXXXXXXXXKSQWVRVIQVAKWMLSKGQGTTMTTYDSLLLAFDMDCR 4
+SQW RVIQ+AKWMLSKGQG TM TYD LLLAFDMD R
Sbjct: 104 IIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDER 154