BLASTX nr result
ID: Gardenia21_contig00006804
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00006804
(1807 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP09102.1| unnamed protein product [Coffea canephora] 677 0.0
ref|XP_006350788.1| PREDICTED: transcription initiation factor I... 535 e-149
ref|XP_004241212.1| PREDICTED: transcription initiation factor I... 533 e-148
ref|XP_009622244.1| PREDICTED: transcription initiation factor I... 533 e-148
ref|XP_011080825.1| PREDICTED: transcription initiation factor I... 532 e-148
ref|XP_009787287.1| PREDICTED: transcription initiation factor I... 532 e-148
ref|XP_012836118.1| PREDICTED: transcription initiation factor I... 511 e-142
ref|XP_012066966.1| PREDICTED: transcription initiation factor I... 506 e-140
ref|XP_012475136.1| PREDICTED: transcription initiation factor I... 470 e-129
ref|XP_002520518.1| protein with unknown function [Ricinus commu... 466 e-128
gb|KDO66627.1| hypothetical protein CISIN_1g015442mg [Citrus sin... 465 e-128
ref|XP_007016334.1| Transcription initiation factor IIA subunit ... 465 e-128
ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citr... 463 e-127
ref|XP_012446718.1| PREDICTED: transcription initiation factor I... 453 e-124
ref|XP_002282322.1| PREDICTED: transcription initiation factor I... 451 e-124
ref|XP_011032247.1| PREDICTED: transcription initiation factor I... 449 e-123
ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Popu... 449 e-123
ref|XP_010033104.1| PREDICTED: transcription initiation factor I... 445 e-122
ref|XP_010685693.1| PREDICTED: transcription initiation factor I... 443 e-121
ref|XP_003543527.1| PREDICTED: transcription initiation factor I... 436 e-119
>emb|CDP09102.1| unnamed protein product [Coffea canephora]
Length = 411
Score = 677 bits (1746), Expect = 0.0
Identities = 341/411 (82%), Positives = 347/411 (84%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS
Sbjct: 1 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 60
Query: 1395 SAPKATPGVTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGTAQ 1216
SAPKATPGVTPVHDLNV TAD MAQTPLPG AQ
Sbjct: 61 SAPKATPGVTPVHDLNVPYEGTEEYETPTADMLFPPTPLQTPMPTPLPGMAQTPLPGNAQ 120
Query: 1215 TPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYMQPP 1036
TPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYMQPP
Sbjct: 121 TPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYMQPP 180
Query: 1035 SPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPNGGYIP 856
SPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFF MSAGKRKRD+FASQYPNGGYIP
Sbjct: 181 SPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFMMSAGKRKRDEFASQYPNGGYIP 240
Query: 855 QQDGAGDRVSNELKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGPIPDPYDDVLST 676
QQDGAGD +SNELKVGQGS T+HNTT AGAEMSLQ GR+ SRISQLDGPIPDPYDDVLST
Sbjct: 241 QQDGAGDTISNELKVGQGSNTQHNTTIAGAEMSLQGGRAVSRISQLDGPIPDPYDDVLST 300
Query: 675 PNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXXXXXXXXXXXXXXX 496
PNIYNYQGVVNEDYNIVNTPAPND+QAATPAAVTQND
Sbjct: 301 PNIYNYQGVVNEDYNIVNTPAPNDIQAATPAAVTQNDTVDDDEDEPLNEDDDDELDDVDQ 360
Query: 495 XXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFDF 343
LNTTHLVLAQFDKVTRTKSRWKCTLKDGIM INNKDILFNKA GEF+F
Sbjct: 361 GEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMRINNKDILFNKATGEFEF 411
>ref|XP_006350788.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Solanum tuberosum]
Length = 403
Score = 535 bits (1377), Expect = e-149
Identities = 282/414 (68%), Positives = 305/414 (73%), Gaps = 3/414 (0%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MASSTTSNVYIHVIEDVI+KVR+EFINNGGPGES+L ELQ LWE+KMM AGAILG IER+
Sbjct: 1 MASSTTSNVYIHVIEDVISKVRDEFINNGGPGESILKELQALWEVKMMNAGAILGTIERN 60
Query: 1395 SAPKATPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGT 1222
SA KATPG +TPVHDLN+ TAD AQTPLPGT
Sbjct: 61 SAAKATPGGPITPVHDLNMPYEGNEEYETPTADILFPPTPLQTPLPGT----AQTPLPGT 116
Query: 1221 AQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYMQ 1042
QTPLPGTAQTPLPGTADSS+YNIPTGGTP TP++YS +ND+GGA E+K GPGRPSP+M
Sbjct: 117 VQTPLPGTAQTPLPGTADSSMYNIPTGGTPFTPSDYSPLNDTGGATELKAGPGRPSPFMH 176
Query: 1041 PPSPWLNQRPPLDVNVAYVEGREE-GERGASHQPMTQDFFTMSAGKRKRDDFASQYPNGG 865
PPSPWLNQRPPLDVNVAYVEGREE G+RG S QPMTQDFF SAGKRKR+DF QY NGG
Sbjct: 177 PPSPWLNQRPPLDVNVAYVEGREEVGDRGGSQQPMTQDFFMNSAGKRKREDFPPQYHNGG 236
Query: 864 YIPQQDGAGDRVSNELKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGPIPDPYDDV 685
YIPQQDGA D + + LK G+GS + T G + S+ RI Q DGPIPD YDD
Sbjct: 237 YIPQQDGAADSIYDNLKSGEGSNIQLELVTVGPVQA-----SAYRIPQFDGPIPDSYDDA 291
Query: 684 LSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXXXXXXXXXXXX 505
LSTPNIY YQGVVNEDYNIVNTPAPND+QA TPA QND
Sbjct: 292 LSTPNIY-YQGVVNEDYNIVNTPAPNDMQAPTPAPALQND-DIDDDDEPLNEDDDDDLDD 349
Query: 504 XXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFDF 343
LNT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 350 VDQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKANGEFDF 403
>ref|XP_004241212.1| PREDICTED: transcription initiation factor IIA large subunit [Solanum
lycopersicum]
Length = 401
Score = 533 bits (1374), Expect = e-148
Identities = 277/413 (67%), Positives = 304/413 (73%), Gaps = 2/413 (0%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MASSTTSNVYIHVIEDVI+KVR+EFINNGGPGES+L ELQ LWE+KMM AGAILG IER+
Sbjct: 1 MASSTTSNVYIHVIEDVISKVRDEFINNGGPGESILKELQALWEVKMMNAGAILGTIERN 60
Query: 1395 SAPKATPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGT 1222
SA KATPG +TPVHDLN+ TAD AQTPLPGT
Sbjct: 61 SAAKATPGGPITPVHDLNMPYEGNEEYETPTADILFPPTPLQTPLPGT----AQTPLPGT 116
Query: 1221 AQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYMQ 1042
QTPLPGTAQTPLPGTADSS+YNIPTGGTP TP++YS +ND+GGA E+K GPGRPSP+M
Sbjct: 117 VQTPLPGTAQTPLPGTADSSMYNIPTGGTPFTPSDYSPLNDTGGATELKAGPGRPSPFMH 176
Query: 1041 PPSPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPNGGY 862
PPSPWLNQRPPLDVNVAYVEGREEG+RG S QPMTQDFF S GKRKR+DF QY NGGY
Sbjct: 177 PPSPWLNQRPPLDVNVAYVEGREEGDRGGSQQPMTQDFFMNSTGKRKREDFPPQYHNGGY 236
Query: 861 IPQQDGAGDRVSNELKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGPIPDPYDDVL 682
IPQQDGA D + + +K G+GS + T G + + RI Q DGPIPD YDD L
Sbjct: 237 IPQQDGAADSIYDNIKSGEGSNIQLELVTVGPVQA-----PAYRIPQFDGPIPDSYDDAL 291
Query: 681 STPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXXXXXXXXXXXXX 502
STPNIY YQGVVNEDYNIVNTPAPND+QA TPA + +D+
Sbjct: 292 STPNIY-YQGVVNEDYNIVNTPAPNDMQAPTPAPLQNDDI--DDDDEPLNEDDDDELDDV 348
Query: 501 XXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFDF 343
LNT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 349 DQGEDLNTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKANGEFDF 401
>ref|XP_009622244.1| PREDICTED: transcription initiation factor IIA large subunit
{ECO:0000250|UniProtKB:P32773,
ECO:0000312|EMBL:CAB57938.1}-like [Nicotiana
tomentosiformis]
Length = 401
Score = 533 bits (1373), Expect = e-148
Identities = 287/414 (69%), Positives = 309/414 (74%), Gaps = 3/414 (0%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MASSTTSNVYIHVIEDVI+KVR+EFINNGGPGES+L ELQGLWEMKMM AGAILG ER+
Sbjct: 1 MASSTTSNVYIHVIEDVISKVRDEFINNGGPGESILNELQGLWEMKMMHAGAILGTTERN 60
Query: 1395 SAPKAT-PGVTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGTA 1219
SAPK T P TPVHDLNV TAD AQTPLPGTA
Sbjct: 61 SAPKGTGPITTPVHDLNVPYEGTEEYETPTADILFPPTPLQTPLPGT----AQTPLPGTA 116
Query: 1218 QTPLPGTAQTPLPGTADSS-LYNIPTGG-TPITPNEYSSVNDSGGAPEVKPGPGRPSPYM 1045
QTPLPGTAQTPLPGTADSS +YNIPTGG TP TPNEYSS+ND+GGA E+K GPGRPSP+M
Sbjct: 117 QTPLPGTAQTPLPGTADSSSMYNIPTGGSTPFTPNEYSSLNDTGGATEMKGGPGRPSPFM 176
Query: 1044 QPPSPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPNGG 865
QPPSPWLNQRPPLDVNVAYVEGREE +RGAS QPMTQDFF +AGKRKR+DFASQY NGG
Sbjct: 177 QPPSPWLNQRPPLDVNVAYVEGREEVDRGASQQPMTQDFFMTAAGKRKREDFASQYNNGG 236
Query: 864 YIPQQDGAGDRVSNELKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGPIPDPYDDV 685
YIPQQDGA D + + +K G+GS + T S+Q +SSRI Q+DGP D YD+
Sbjct: 237 YIPQQDGAADSIYDIMKDGEGSNIQLELVT-----SIQA--ASSRIPQVDGPT-DHYDEA 288
Query: 684 LSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXXXXXXXXXXXX 505
LSTPNIY YQGVVNEDYNIVNTPAPND+QA TPA V QND
Sbjct: 289 LSTPNIYGYQGVVNEDYNIVNTPAPNDMQAPTPAPVLQNDDVDDDDEPLNENDDDDFDDV 348
Query: 504 XXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFDF 343
NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 349 DQGEDL-NTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 401
>ref|XP_011080825.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Sesamum indicum]
Length = 410
Score = 532 bits (1371), Expect = e-148
Identities = 287/422 (68%), Positives = 304/422 (72%), Gaps = 11/422 (2%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MASSTTSNVYIHVIEDVINKVR+EFINNGGPGE VL ELQGLWE+KMMQAGAILGPI+RS
Sbjct: 1 MASSTTSNVYIHVIEDVINKVRDEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 60
Query: 1395 SAPKATPG----VTPVHDLNV-XXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPL 1231
+ K+ G PVHDLNV TAD AQTPL
Sbjct: 61 ATQKSGAGGPITPNPVHDLNVPYEGTEEYYEPPTADLLVPPTPLQTPMQTPLPGTAQTPL 120
Query: 1230 PGTAQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSP 1051
PG AQTPLPGTA TPLPG+ SSLYNIPTGGTPITPNEY+S N++ G PEVK GPGRPSP
Sbjct: 121 PGMAQTPLPGTAPTPLPGSDSSSLYNIPTGGTPITPNEYTSTNEN-GVPEVKAGPGRPSP 179
Query: 1050 YMQPPSPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPN 871
YMQPPS W+NQRPPLDVNVAYVEGREE ERGA HQP TQDFF +S+GKRKRDD QY
Sbjct: 180 YMQPPSAWINQRPPLDVNVAYVEGREESERGAPHQPTTQDFF-ISSGKRKRDDLPPQYRA 238
Query: 870 GGYIPQQDGAGDRVSNE------LKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGP 709
GGYIPQQDGAGD +S+E LKV QG +M Q G SSRI QLDGP
Sbjct: 239 GGYIPQQDGAGDNISDEDNRSQNLKVVQG---------GNQQMFFQVGTMSSRIPQLDGP 289
Query: 708 IPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXXXX 529
IPDPYDDVLSTPNIYNYQGVVNEDYNIVNTP PN++ AATPA V QND
Sbjct: 290 IPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPMPNEMHAATPAPV-QNDTGDDDDDEPLNE 348
Query: 528 XXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEF 349
LNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEF
Sbjct: 349 DDDDDLDDVDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF 408
Query: 348 DF 343
DF
Sbjct: 409 DF 410
>ref|XP_009787287.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Nicotiana sylvestris]
Length = 403
Score = 532 bits (1371), Expect = e-148
Identities = 284/416 (68%), Positives = 309/416 (74%), Gaps = 5/416 (1%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MASSTTSNVYIHVIEDVI+KVR+EFINNGGPGES+L ELQGLWEMKMM AGAILG ER+
Sbjct: 1 MASSTTSNVYIHVIEDVISKVRDEFINNGGPGESILNELQGLWEMKMMHAGAILGTTERN 60
Query: 1395 SAPKATPG---VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPG 1225
APK TPG TPVHDLNV TAD AQTPLPG
Sbjct: 61 PAPKGTPGGPITTPVHDLNVPYEGTEEYETPTADILFPPTPLQTPLPGT----AQTPLPG 116
Query: 1224 TAQTPLPGTAQTPLPGTADSS-LYNIPTGG-TPITPNEYSSVNDSGGAPEVKPGPGRPSP 1051
T QTPLPGTAQTPLPGTADSS +YNIPTGG TP TPNEYSS+ND+GGA ++K GPGRPSP
Sbjct: 117 TVQTPLPGTAQTPLPGTADSSSMYNIPTGGSTPFTPNEYSSLNDTGGATQLKGGPGRPSP 176
Query: 1050 YMQPPSPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPN 871
+MQPPSPWLNQRPPLDVNVAYVEGREE +RGAS QPMTQDFF +AGKRKR+DFASQY N
Sbjct: 177 FMQPPSPWLNQRPPLDVNVAYVEGREEVDRGASQQPMTQDFFMTAAGKRKREDFASQYNN 236
Query: 870 GGYIPQQDGAGDRVSNELKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGPIPDPYD 691
GGYIPQQDGA D + + +K G+G+T + T S+Q ++SRI Q+DGP D YD
Sbjct: 237 GGYIPQQDGAADSIYDIMKAGEGNTIQLELVT-----SIQA--AASRIPQVDGPT-DHYD 288
Query: 690 DVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXXXXXXXXXX 511
+ LSTPNIY YQGVVNEDYNIVNTPAPND+QA TPA V QND
Sbjct: 289 EALSTPNIYGYQGVVNEDYNIVNTPAPNDMQAPTPAPVLQNDDVDDDDEPLNENDDDDFD 348
Query: 510 XXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFDF 343
NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 349 DVDQGEDL-NTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 403
>ref|XP_012836118.1| PREDICTED: transcription initiation factor IIA large subunit
[Erythranthe guttatus] gi|604347799|gb|EYU45954.1|
hypothetical protein MIMGU_mgv1a007767mg [Erythranthe
guttata]
Length = 396
Score = 511 bits (1317), Expect = e-142
Identities = 277/415 (66%), Positives = 297/415 (71%), Gaps = 4/415 (0%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MASSTTSNVYIHVIEDVINKVR+EF GGPGE VL+ELQGLWE+KMM+AGAILGPI+RS
Sbjct: 1 MASSTTSNVYIHVIEDVINKVRDEFNGGGGPGEGVLSELQGLWELKMMEAGAILGPIDRS 60
Query: 1395 SAPKATPGV---TPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPG 1225
++ K G PVHDLNV TAD AQTPLPG
Sbjct: 61 ASQKGAGGPITPNPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPLPGT----AQTPLPG 116
Query: 1224 TAQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYM 1045
AQTPLPGTAQTPL G+ SLYNIPTGGTPITPNEY S ND+ G EVK GPGRPSPYM
Sbjct: 117 MAQTPLPGTAQTPLTGSDSGSLYNIPTGGTPITPNEYVSPNDNVGVSEVKAGPGRPSPYM 176
Query: 1044 QPPSPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPNGG 865
QPPSPW NQRPPLDVNVAYVEGREE ERG HQ TQDFF +++GKRKRD+F QY GG
Sbjct: 177 QPPSPWQNQRPPLDVNVAYVEGREESERGGPHQQTTQDFF-VASGKRKRDNFPPQYQAGG 235
Query: 864 YIPQQDGAGDRVSNELKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGPIPDPYDDV 685
YIPQQDGAGD +S+E+KV ++ Q G SSSRI Q DGPIPDPYDDV
Sbjct: 236 YIPQQDGAGDNLSDEMKV-------------VLDVIGQGGTSSSRIPQSDGPIPDPYDDV 282
Query: 684 LSTPNIYNYQ-GVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXXXXXXXXXXX 508
LSTPNIYNYQ GVVNEDYNIVNTP PN++ AATPA V QNDV
Sbjct: 283 LSTPNIYNYQGGVVNEDYNIVNTPMPNEMLAATPAPV-QNDVIDDDEDEPLNEDDDDDGD 341
Query: 507 XXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFDF 343
LNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 342 ELDEGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 396
>ref|XP_012066966.1| PREDICTED: transcription initiation factor IIA large subunit
[Jatropha curcas] gi|643735683|gb|KDP42211.1|
hypothetical protein JCGZ_02941 [Jatropha curcas]
Length = 407
Score = 506 bits (1302), Expect = e-140
Identities = 272/417 (65%), Positives = 299/417 (71%), Gaps = 8/417 (1%)
Frame = -2
Query: 1569 SSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERSSA 1390
SS TS VYIHVIEDVINKVR+EFINNGGPGESVL ELQG+WEMKMMQAG ILGPIERSSA
Sbjct: 4 SSATSTVYIHVIEDVINKVRDEFINNGGPGESVLNELQGIWEMKMMQAGVILGPIERSSA 63
Query: 1389 PKATPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGTAQ 1216
K PG +TPVHDLNV TA+ QTPLPG+ Q
Sbjct: 64 AKPVPGGPITPVHDLNVPYEGPEEYETPTAEILFPPTPLQTPI--------QTPLPGSVQ 115
Query: 1215 TPLPGTAQTPLPGTAD-SSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYMQP 1039
TPLPG QTPLPG+AD SS+YNIPTG T P + V+D+GG+ E KPG RPSPYMQ
Sbjct: 116 TPLPGNGQTPLPGSADNSSMYNIPTGPTSEYP---TPVSDTGGSTEAKPG--RPSPYMQA 170
Query: 1038 PSPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPNGGYI 859
PSPW+NQRPPLDVNVAYVEGREE +RG SHQP+TQDFF MS+GKRKR+DFA+Q+ NGG+I
Sbjct: 171 PSPWMNQRPPLDVNVAYVEGREEADRGNSHQPLTQDFFMMSSGKRKREDFATQFNNGGFI 230
Query: 858 PQQDGAGDRVSNELKV--GQGSTTRHNT-TTAGAEMSLQRGRSSSRISQLDGPIPDPYDD 688
PQQDGAGD S L+ G GS R +T T+A E+ R +I QLDGPIPDPYDD
Sbjct: 231 PQQDGAGDVPSEALQASQGNGSLGRCDTITSANIEILSHATRRVLKIPQLDGPIPDPYDD 290
Query: 687 VLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVA--XXXXXXXXXXXXXXX 514
VLSTPNIYNYQGVVNEDYNI NTPAPND+QA+TPA QND
Sbjct: 291 VLSTPNIYNYQGVVNEDYNIANTPAPNDIQASTPAVAPQNDAVDDDDDEPLNEDDDDDDD 350
Query: 513 XXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFDF 343
+NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 351 LDDVEQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 407
>ref|XP_012475136.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Gossypium raimondii] gi|763741415|gb|KJB08914.1|
hypothetical protein B456_001G112500 [Gossypium
raimondii]
Length = 391
Score = 470 bits (1210), Expect = e-129
Identities = 262/422 (62%), Positives = 293/422 (69%), Gaps = 11/422 (2%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MAS+TTS+VYI+VIEDVINKVREEFINNGGPGE+VL ELQG+WE KMMQAG ILGPIERS
Sbjct: 1 MASTTTSSVYINVIEDVINKVREEFINNGGPGEAVLNELQGIWEAKMMQAGVILGPIERS 60
Query: 1395 SAPKATPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGT 1222
S + TPG +TPVHDLNV TAD TPL
Sbjct: 61 SQKQPTPGSAITPVHDLNVPYEGTEEYETPTADMLFPP----------------TPL--- 101
Query: 1221 AQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYMQ 1042
QTP+P TPLPG+AD S+YNIPTGG+ + VND+G ++K G RPSPYMQ
Sbjct: 102 -QTPVP----TPLPGSADGSMYNIPTGGSDYP----TPVNDNGSNADIKGG--RPSPYMQ 150
Query: 1041 PPSPWLNQRPPL--DVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPNG 868
PSPW NQR PL DVNVAYVEGREE +RG S+QP+TQDFF MS+GKRKR+DFA QY NG
Sbjct: 151 SPSPWSNQRTPLSVDVNVAYVEGREEVDRGTSNQPLTQDFFMMSSGKRKREDFA-QYQNG 209
Query: 867 GYIPQQDGAGDRVSNELKV-----GQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGPIP 703
GYIPQQDGAGD S K G RH+TTTA ++ + RSSS+I QLDGPIP
Sbjct: 210 GYIPQQDGAGDATSEVAKAEGSRGGNFLDRRHSTTTAKSKFLAELARSSSKIPQLDGPIP 269
Query: 702 DPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVA--XXXXXXXXXX 529
D Y+D+LSTPNIYNYQGVVNEDYN+VNTPAPND+QA+TPA QND+
Sbjct: 270 DSYEDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQASTPAPAPQNDIVDDDDDEPLNEDD 329
Query: 528 XXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEF 349
LNT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEF
Sbjct: 330 DDEDDLDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF 389
Query: 348 DF 343
DF
Sbjct: 390 DF 391
>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
gi|223540360|gb|EEF41931.1| protein with unknown function
[Ricinus communis]
Length = 383
Score = 466 bits (1200), Expect = e-128
Identities = 253/414 (61%), Positives = 284/414 (68%), Gaps = 5/414 (1%)
Frame = -2
Query: 1569 SSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERSSA 1390
S+TTS VYIHVIEDV+NKVR+EFINNG PGE+VL ELQ +WE+KMMQAG I GPIERSS
Sbjct: 5 STTTSTVYIHVIEDVVNKVRDEFINNG-PGETVLNELQAIWELKMMQAGVICGPIERSSG 63
Query: 1389 PKATPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGTAQ 1216
K PG +TPVHDLNV TA+
Sbjct: 64 AKTVPGGVITPVHDLNVPYEGTEEYETPTAEILF------------------------PP 99
Query: 1215 TPLPGTAQTPLPGTAD-SSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYMQP 1039
TPLPGTAQTPLPG+ D SS+YNIPTG T P + V+DSGG+ E K GRPSPYMQP
Sbjct: 100 TPLPGTAQTPLPGSVDNSSMYNIPTGPTSEYP---TPVSDSGGSTEAK--AGRPSPYMQP 154
Query: 1038 PSPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPNGGYI 859
PSPW+NQRPPLDVN+AYVEGREE +RG S+QP+TQDFFT ++GKRKR+DFA+QY NGG+I
Sbjct: 155 PSPWINQRPPLDVNIAYVEGREEADRGTSNQPLTQDFFTGASGKRKREDFAAQYNNGGFI 214
Query: 858 PQQDGAGDRVSNELKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGPIPDPYDDVLS 679
PQQDGAGD L+V R +A E+ R +I QLDGPIPDPYDDVLS
Sbjct: 215 PQQDGAGDTPFEVLQV-----ERDTVISADIEILSSVTRRGLKIPQLDGPIPDPYDDVLS 269
Query: 678 TPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVA--XXXXXXXXXXXXXXXXXX 505
TPNIYNYQGV NEDYNI NTPAPND+QA+TPA + QNDV
Sbjct: 270 TPNIYNYQGVANEDYNIANTPAPNDLQASTPAIIPQNDVVDDDDDEPLNEDDDDDDDLDD 329
Query: 504 XXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFDF 343
+NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 330 VDQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 383
>gb|KDO66627.1| hypothetical protein CISIN_1g015442mg [Citrus sinensis]
Length = 406
Score = 465 bits (1197), Expect = e-128
Identities = 262/424 (61%), Positives = 293/424 (69%), Gaps = 13/424 (3%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MA+S T VYI VIEDVI+KVR+EF+NNG PGESVL ELQG+WEMKM+QAG I I+R+
Sbjct: 1 MATSATGMVYIRVIEDVISKVRDEFVNNG-PGESVLNELQGIWEMKMIQAGVI---IDRT 56
Query: 1395 SAPKA-TPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPG 1225
SAPK PG +TPVHDLNV TA+ QTPLPG
Sbjct: 57 SAPKQPAPGGPITPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPI--------QTPLPG 108
Query: 1224 TA----QTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRP 1057
+ TPLPG+ TPLPGTAD+S YNIPTG + + +DSGG E K G GRP
Sbjct: 109 STPLPGSTPLPGS--TPLPGTADNSTYNIPTGSSDYP----TPASDSGGNTEAKSGNGRP 162
Query: 1056 SPYMQPP-SPWLNQRPPL--DVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFA 886
S YM PP SPW+N RPPL DVNVAYVEGR+E +RG SHQP+TQDFFTMSAGKRKR+DF
Sbjct: 163 SSYMPPPPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFP 222
Query: 885 SQYPNGGY-IPQQDGAGDRVSN--ELKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLD 715
+QY NGGY IPQQDGAGD +S EL+V + + + TTA E+ SS +I QLD
Sbjct: 223 AQYHNGGYNIPQQDGAGDAMSEIFELEVSEFPGRQDSVTTANREIFANLASSSVKIPQLD 282
Query: 714 GPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXX 535
GPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPND+QA+TPA VTQND A
Sbjct: 283 GPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDDDDEPL 342
Query: 534 XXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAG 355
LNT HLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILFNKA G
Sbjct: 343 NENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATG 402
Query: 354 EFDF 343
EFDF
Sbjct: 403 EFDF 406
>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
gi|508786697|gb|EOY33953.1| Transcription initiation
factor IIA subunit 1 [Theobroma cacao]
Length = 393
Score = 465 bits (1197), Expect = e-128
Identities = 264/423 (62%), Positives = 290/423 (68%), Gaps = 12/423 (2%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MASSTTS VYIHVIEDVINKVR+EFINNGGPGE+VL ELQG+WEMKMMQAG + GPIERS
Sbjct: 1 MASSTTSAVYIHVIEDVINKVRDEFINNGGPGETVLNELQGIWEMKMMQAGVVCGPIERS 60
Query: 1395 SAPKA-TPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPG 1225
S K TPG +TPVHDLNV TAD TPL
Sbjct: 61 SGQKQPTPGGPITPVHDLNVPYEGPEEYETPTADMLFPP----------------TPL-- 102
Query: 1224 TAQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYM 1045
QTP+P TPLPG+AD S+YNIPTG + + V D GG + K RPSPYM
Sbjct: 103 --QTPVP----TPLPGSADGSMYNIPTGSSDYP----TPVTDGGGNTDAKGA--RPSPYM 150
Query: 1044 QPPSPWLNQRPPL--DVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPN 871
Q PSPW NQR PL DVNVAYVEGR+E +RG SHQP+TQDFF MS+GKRKR+DF +QY N
Sbjct: 151 QSPSPWPNQRTPLSVDVNVAYVEGRDEVDRGPSHQPLTQDFFMMSSGKRKREDFTTQYHN 210
Query: 870 GG-YIPQQDGAGDRVSNELKV--GQGST---TRHNTTTAGAEMSLQRGRSSSRISQLDGP 709
GG YIPQQDGAGD + K +GS R +TTTA +E+ RSSS+I QLDGP
Sbjct: 211 GGGYIPQQDGAGDAIYEVAKAEGSKGSDFLDRRDSTTTAKSEILAHLARSSSKIPQLDGP 270
Query: 708 IPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVA-XXXXXXXXX 532
IPDPYDD+LSTPNIYNYQGVVNEDYN+VNTPAPND+QAATPA V QND
Sbjct: 271 IPDPYDDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQAATPAPVAQNDTGDDDDDEPLNE 330
Query: 531 XXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGE 352
LNT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GE
Sbjct: 331 DDDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGE 390
Query: 351 FDF 343
FDF
Sbjct: 391 FDF 393
>ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citrus clementina]
gi|568870376|ref|XP_006488381.1| PREDICTED: transcription
initiation factor IIA subunit 1-like [Citrus sinensis]
gi|557526833|gb|ESR38139.1| hypothetical protein
CICLE_v10028561mg [Citrus clementina]
Length = 406
Score = 463 bits (1192), Expect = e-127
Identities = 261/424 (61%), Positives = 292/424 (68%), Gaps = 13/424 (3%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MA+S T VYI VIEDVI+KVR+EF+NNG PGESVL ELQG+WEMKM+QAG I I+R+
Sbjct: 1 MATSATGMVYIRVIEDVISKVRDEFVNNG-PGESVLNELQGIWEMKMIQAGVI---IDRT 56
Query: 1395 SAPKA-TPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPG 1225
SAPK PG +TPVHDLNV TA+ QTPLPG
Sbjct: 57 SAPKQPAPGGPITPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPI--------QTPLPG 108
Query: 1224 TA----QTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRP 1057
+ TPLPG+ TPLPGTAD+S YNIPTG + + +DSGG E K G GRP
Sbjct: 109 STPLPGSTPLPGS--TPLPGTADNSTYNIPTGSSDYP----TPASDSGGNTEAKSGNGRP 162
Query: 1056 SPYMQPP-SPWLNQRPPL--DVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFA 886
S YM PP SPW+N RPPL DVNVAYVEGR+E +RG SHQP+TQDFFTMSAGKRKR+DF
Sbjct: 163 SSYMPPPPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFP 222
Query: 885 SQYPNGGY-IPQQDGAGDRVSN--ELKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLD 715
+QY NGGY IPQQDGAGD + EL+V + + + TTA E+ SS +I QLD
Sbjct: 223 AQYHNGGYNIPQQDGAGDAMPEIFELEVSEFPGRQDSVTTANREIFANLASSSVKIPQLD 282
Query: 714 GPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXX 535
GPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPND+QA+TPA VTQND A
Sbjct: 283 GPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDDDDEPL 342
Query: 534 XXXXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAG 355
LNT HLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILFNKA G
Sbjct: 343 NENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATG 402
Query: 354 EFDF 343
EFDF
Sbjct: 403 EFDF 406
>ref|XP_012446718.1| PREDICTED: transcription initiation factor IIA large subunit
[Gossypium raimondii] gi|763788823|gb|KJB55819.1|
hypothetical protein B456_009G096500 [Gossypium
raimondii]
Length = 391
Score = 453 bits (1166), Expect = e-124
Identities = 255/421 (60%), Positives = 280/421 (66%), Gaps = 10/421 (2%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
M SSTTS VYIHVIEDVI+KVR+EFINNGGPGE+VL ELQGLWE KMMQAGAI GPIERS
Sbjct: 1 MTSSTTSAVYIHVIEDVISKVRDEFINNGGPGEAVLNELQGLWETKMMQAGAICGPIERS 60
Query: 1395 SA---PKATPGVTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPG 1225
+ P A +TPVHDLNV TAD TPL
Sbjct: 61 TGQKQPTAGGPITPVHDLNVPYEGTEEYETPTAD----------------MLFPPTPL-- 102
Query: 1224 TAQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYM 1045
QTP+P TPLPG+AD S+YNIPTG + + VND +VK GRPSPYM
Sbjct: 103 --QTPVP----TPLPGSADGSMYNIPTGSSDYP----TPVNDGASNADVK--GGRPSPYM 150
Query: 1044 QPPSPWLNQRPPL--DVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPN 871
Q PSPW NQR PL DVNVAYVEGR+E +RG S+QP+TQDFF M GKRKR+DFA+QY N
Sbjct: 151 QSPSPWSNQRTPLSVDVNVAYVEGRDEVDRGTSNQPLTQDFFMMPPGKRKREDFATQYNN 210
Query: 870 GGYIPQQDGAGDRVSNELKV----GQGSTTRHNTTTAGAEMSLQR-GRSSSRISQLDGPI 706
GGYIPQQDGAGD S K G RH++ T G L SS +ISQLDGPI
Sbjct: 211 GGYIPQQDGAGDSTSEVAKTEGSKGCNFLGRHDSATTGKTNILAHFATSSLKISQLDGPI 270
Query: 705 PDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXXXXX 526
PDP++D+LSTPNIYNYQGVV EDYN+ NTPAPND+QAATPA V QND
Sbjct: 271 PDPFEDMLSTPNIYNYQGVVGEDYNVANTPAPNDLQAATPAPVAQNDTGDDDDDEPLNED 330
Query: 525 XXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFD 346
LNT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFD
Sbjct: 331 DDDDDLDDVDQEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFD 390
Query: 345 F 343
F
Sbjct: 391 F 391
>ref|XP_002282322.1| PREDICTED: transcription initiation factor IIA subunit 1 [Vitis
vinifera] gi|297746029|emb|CBI16085.3| unnamed protein
product [Vitis vinifera]
Length = 393
Score = 451 bits (1161), Expect = e-124
Identities = 253/421 (60%), Positives = 281/421 (66%), Gaps = 12/421 (2%)
Frame = -2
Query: 1569 SSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERSSA 1390
SS TS VY+ VIEDVINKVR+EF+NNGGPGESVL+ELQG+WEMKM+QAG + GPIERS+A
Sbjct: 4 SSMTSTVYVSVIEDVINKVRDEFVNNGGPGESVLSELQGIWEMKMVQAGVVTGPIERSTA 63
Query: 1389 PKATPG----VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGT 1222
PK T G PVHDLNV TA+ TPL
Sbjct: 64 PKQTSGAPAPTPPVHDLNVPYEGTEEYETPTAE----------------ILFPPTPL--- 104
Query: 1221 AQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYMQ 1042
QTP+ QTPLPG D+S+YNIPTG P EY + D GGA ++K GRP YM
Sbjct: 105 -QTPI----QTPLPGMGDNSMYNIPTG-----PTEYPAAQDGGGATDMK--SGRPPSYMP 152
Query: 1041 PPSPWLNQRPPL--DVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPNG 868
PPSPW+ QRPPL DVNVAYVEGR+EG+RG S QP+TQDFF MS+GKRKR+DF SQY
Sbjct: 153 PPSPWMQQRPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDFPSQYHTS 212
Query: 867 GYIPQQDGAGDRVSN--ELKVGQGSTT---RHNTTTAGAEMSLQRGRSSSRISQLDGPIP 703
GYIPQQDGAGD E++V QGS + T A E+ Q S RI QLDGPIP
Sbjct: 213 GYIPQQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKANREIFPQVAGSYVRIPQLDGPIP 272
Query: 702 DPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVA-XXXXXXXXXXX 526
DPY+DVLSTPNIYNYQGVVNEDYNIVNTPAPND+QA TPA QNDV
Sbjct: 273 DPYEDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAGTPAVGIQNDVGDDDDDEPPLNEN 332
Query: 525 XXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFD 346
LNT HLVLAQFDKVTRTKS+WKCTLKDGIMHINNKDILFNKA GEFD
Sbjct: 333 DDDDLDDVEQGEELNTQHLVLAQFDKVTRTKSKWKCTLKDGIMHINNKDILFNKANGEFD 392
Query: 345 F 343
F
Sbjct: 393 F 393
>ref|XP_011032247.1| PREDICTED: transcription initiation factor IIA subunit 1-like isoform
X1 [Populus euphratica]
Length = 408
Score = 449 bits (1156), Expect = e-123
Identities = 256/423 (60%), Positives = 294/423 (69%), Gaps = 13/423 (3%)
Frame = -2
Query: 1572 ASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERSS 1393
+S TS VYI+VIEDVINKVR+EFINNGGPGE+VL ELQGLWE KMMQAGAI G ERSS
Sbjct: 3 SSDATSPVYINVIEDVINKVRDEFINNGGPGETVLYELQGLWEAKMMQAGAICGTAERSS 62
Query: 1392 APKA-TPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGT 1222
A K PG +TPVHDLNV TA+ QTPLPG+
Sbjct: 63 ANKLPVPGGPITPVHDLNVPYEGTEEYETPTAEMLFPPTPMQTPM--------QTPLPGS 114
Query: 1221 AQTPLPGTAQTPLPGTAD-SSLYNIPTGGTPI-TPNEYSSVNDSGGAPEVKPGPGRPSPY 1048
AQTPLPG AQTPLPG+ D SS+YNIPTG + TP +D+GG+ + K G RPSP+
Sbjct: 115 AQTPLPGNAQTPLPGSVDNSSMYNIPTGSSDYPTPG-----SDTGGSTDGKAG--RPSPF 167
Query: 1047 MQPPSPWLNQRPPL--DVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYP 874
MQPP+ W++QRPPL DVNVAYVEGR+E +RG SHQ +TQDFF M +GKRKR+DFA +Y
Sbjct: 168 MQPPT-WMHQRPPLSVDVNVAYVEGRDEVDRGTSHQTLTQDFF-MPSGKRKREDFAPKYN 225
Query: 873 NGGYIPQQDGAGDRVSNELKVGQGSTT--RHNTTTAGAEMSLQR-GRSSSRISQLDGPIP 703
NGG+IPQQDGAGD S +V QG+ R +T+T ++ L R RS +I Q+DGPIP
Sbjct: 226 NGGFIPQQDGAGDSASEVSQVSQGNDPLGRCDTSTTKNKVILARVSRSYLKIPQVDGPIP 285
Query: 702 DPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXXXXXX 523
DPYDDV+STPNIYNYQGV NEDYNI NTPAPND+ A+TPA V+QNDVA
Sbjct: 286 DPYDDVVSTPNIYNYQGVANEDYNIANTPAPNDLLASTPAVVSQNDVADDDDDDEPLNED 345
Query: 522 XXXXXXXXXXXXL---NTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGE 352
NT HLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILFNKA GE
Sbjct: 346 DDDDEDLDEVDQGEELNTQHLVLAQFDKVTRTKSRWKCILKDGIMHINNKDILFNKATGE 405
Query: 351 FDF 343
F+F
Sbjct: 406 FEF 408
>ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
gi|550348134|gb|ERP66111.1| hypothetical protein
POPTR_0001s25120g [Populus trichocarpa]
Length = 405
Score = 449 bits (1154), Expect = e-123
Identities = 247/419 (58%), Positives = 286/419 (68%), Gaps = 8/419 (1%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MASS TS VY VIEDVI+KVR+EFINNGGPGE+VL+ELQGLWE K+MQAG + GPI RS
Sbjct: 1 MASSATSTVYTEVIEDVIDKVRDEFINNGGPGETVLSELQGLWEKKLMQAGVLSGPIVRS 60
Query: 1395 SAPK--ATPGVTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGT 1222
SA K G+TPVHDLNV TA+ AQTPLPG
Sbjct: 61 SANKQLVPGGLTPVHDLNVPYEGTEEYETPTAEILFPPTPLPGS--------AQTPLPGN 112
Query: 1221 AQTPLPGTAQTPLPGTAD-SSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYM 1045
QTPLPG TPLPG+ D SS+YNI TG + P + V+D+GG+ +VK G RPS +M
Sbjct: 113 VQTPLPGNVPTPLPGSVDNSSMYNISTGSSSDYP---TPVSDAGGSTDVKAG--RPSHFM 167
Query: 1044 QPPSPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPNGG 865
Q PSP ++QRPPLDVNVAYVEGR+E +RG SHQ +TQDFF MS+GKRKR DFA +Y NGG
Sbjct: 168 QSPSPLMHQRPPLDVNVAYVEGRDEVDRGGSHQTLTQDFF-MSSGKRKRGDFAPKYNNGG 226
Query: 864 YIPQQDGAGDRVSNELKVGQGSTTR---HNTTTAGAEMSLQRGRSSSRISQLDGPIPDPY 694
+IPQQDGA D S +V QG+ TT E+ + RS +I Q+DGPIPDPY
Sbjct: 227 FIPQQDGAVDSASEVSQVSQGNNPHGRCDTITTKNREILARVSRSYVKIPQVDGPIPDPY 286
Query: 693 DDVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVA--XXXXXXXXXXXXX 520
DD+LSTPNIYNYQGV NEDYNI NTPAPND+QA+TPA V+QND
Sbjct: 287 DDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDVDDDDDEPLNEDDDDD 346
Query: 519 XXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFDF 343
LNT HL+LAQFDKVTRTKSRWKCTLKDG+MHINN+DILFNKA GEF+F
Sbjct: 347 EDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINNRDILFNKATGEFEF 405
>ref|XP_010033104.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Eucalyptus grandis] gi|629086291|gb|KCW52648.1|
hypothetical protein EUGRSUZ_J02029 [Eucalyptus grandis]
Length = 393
Score = 445 bits (1144), Expect = e-122
Identities = 242/418 (57%), Positives = 273/418 (65%), Gaps = 8/418 (1%)
Frame = -2
Query: 1572 ASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERSS 1393
A STTS+VY+HVI DVI KVREEF+NNGGPGE VL ELQG+WE KMMQAGA+LGP++RS+
Sbjct: 3 APSTTSSVYLHVIGDVITKVREEFVNNGGPGEEVLNELQGMWETKMMQAGAVLGPVDRSA 62
Query: 1392 APKATPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGTA 1219
KA G PVHDLNV TAD TPL
Sbjct: 63 TAKAPAGGAAAPVHDLNVPYEGTEEFETPTADMLFPP----------------TPL---- 102
Query: 1218 QTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVNDSGGAPEVKPGPGRPSPYMQP 1039
QTP+P TPLPGT DS+LYNIPTG + V +S G E+K G RPSPYM P
Sbjct: 103 QTPIP----TPLPGTVDSNLYNIPTGSSDYPTPSNDGVGNSSGNTEIKAG--RPSPYMPP 156
Query: 1038 PSPWLNQRPPL--DVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPNGG 865
PSPW+NQRPPL DVNVAY+E RE+G+RG SHQP TQDFFT S GKRKRDDF Y NGG
Sbjct: 157 PSPWMNQRPPLGVDVNVAYMEAREDGDRGTSHQPHTQDFFTAS-GKRKRDDFVQHYQNGG 215
Query: 864 YIPQQDGAGDRVSNELKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGPIPDPYDDV 685
YIPQQDGAGD V + ++ + +TT T +M GR S+I Q+DG PDPYD++
Sbjct: 216 YIPQQDGAGDAVFEDSQITEKTTTLPAADTRNRQMLAHVGRPLSKIPQVDGQTPDPYDEM 275
Query: 684 LSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVAXXXXXXXXXXXXXXXXXX 505
LSTPNIYNYQGVV+EDYNI +TPAPND+QA TPA NDV
Sbjct: 276 LSTPNIYNYQGVVSEDYNIASTPAPNDLQAGTPAIGVHNDVGEDEDEDEPPLNENDDDDD 335
Query: 504 XXXXXXL----NTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEFDF 343
NT HLVLAQFDKVTRTKS+WKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 336 DLDDVDNGEELNTQHLVLAQFDKVTRTKSKWKCTLKDGIMHINNKDILFNKATGEFDF 393
>ref|XP_010685693.1| PREDICTED: transcription initiation factor IIA large subunit [Beta
vulgaris subsp. vulgaris] gi|870853304|gb|KMT05185.1|
hypothetical protein BVRB_7g173320 [Beta vulgaris subsp.
vulgaris]
Length = 389
Score = 443 bits (1140), Expect = e-121
Identities = 255/422 (60%), Positives = 288/422 (68%), Gaps = 11/422 (2%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
M +STTS VYIHVIEDVI KVREEF+ +GGPGE VL ELQGLWE+KMMQAGA+L P ER
Sbjct: 1 MTTSTTSAVYIHVIEDVIEKVREEFVVDGGPGEKVLQELQGLWELKMMQAGAVLQPSERP 60
Query: 1395 SAPKATPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGT 1222
+ PK PG +TPVHDLNV TA+ TPL
Sbjct: 61 TVPKPVPGAAITPVHDLNVPYEGTEEYETPTAE----------------MLFPPTPL--- 101
Query: 1221 AQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEY--SSVNDSGGAP-EVKPGPGRPSP 1051
QTP+ QTPLPGTADSS+YNIPTG P++Y + N+ G P ++KPG GRPSP
Sbjct: 102 -QTPI----QTPLPGTADSSMYNIPTG-----PSDYPTPTSNEGVGVPNDIKPGVGRPSP 151
Query: 1050 YMQPPSPWLNQRPPL--DVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQY 877
YMQPPSPW+NQRPPL DVNVAYVEGREE +RG+S QP TQDFFT GKRKRD+F QY
Sbjct: 152 YMQPPSPWMNQRPPLGVDVNVAYVEGREEVDRGSS-QPATQDFFTGPTGKRKRDEFPPQY 210
Query: 876 PNGGYIPQQDGAGDRVSN--ELKVGQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGPIP 703
GGYIPQQDGAGD + EL++ Q S + + +LQ+G SSSRI QLDGPIP
Sbjct: 211 QGGGYIPQQDGAGDAAGDVFELEIIQ-SKSLGRSGVVKVTSALQKG-SSSRIPQLDGPIP 268
Query: 702 DPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVA--XXXXXXXXXX 529
DPY+D+LSTPNIYNYQ VNEDYN+VNTPAPND+QA TPA QND+
Sbjct: 269 DPYEDMLSTPNIYNYQ-PVNEDYNVVNTPAPNDLQAGTPAPPIQNDLGDENGDDEPPLNE 327
Query: 528 XXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEF 349
LNT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA+GEF
Sbjct: 328 NDDDDLDDIDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKASGEF 387
Query: 348 DF 343
DF
Sbjct: 388 DF 389
>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoformX1 [Glycine max] gi|947074218|gb|KRH23109.1|
hypothetical protein GLYMA_13G339000 [Glycine max]
Length = 391
Score = 436 bits (1122), Expect = e-119
Identities = 245/422 (58%), Positives = 281/422 (66%), Gaps = 11/422 (2%)
Frame = -2
Query: 1575 MASSTTSNVYIHVIEDVINKVREEFINNGGPGESVLTELQGLWEMKMMQAGAILGPIERS 1396
MA+STTS VYI VIEDV+ KVR+EF+NNGGPGE VL ELQ +WE KMMQAGA+LGPIERS
Sbjct: 1 MAASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERS 60
Query: 1395 SAPKATPG--VTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXXXMAQTPLPGT 1222
+A K TPG +TPVHDLNV TAD TPL
Sbjct: 61 TAAKPTPGGPITPVHDLNVPYEGTDEYETPTAD----------------MLFPPTPL--- 101
Query: 1221 AQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEY-SSVNDSGGAPEVKPGPGRPSPYM 1045
QTP+ QTPLPGT D+S YNIPTG P++Y SS ND+GG + K RP+PYM
Sbjct: 102 -QTPI----QTPLPGTGDNSTYNIPTG-----PSDYPSSGNDTGGNADGK--GARPAPYM 149
Query: 1044 QPPSPWLNQRPPLDVNVAYVEGREEGERGASHQPMTQDFFTMSAGKRKRDDFASQYPNGG 865
Q PSPW+NQRPPLDVNVAYVEGR+E +RG S+QP TQDFFTM +GKRKR+D SQY GG
Sbjct: 150 QSPSPWMNQRPPLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTSQYNAGG 209
Query: 864 YIPQQDGAGDRVSNELKV---GQGSTTRHNTTTAGAEMSLQRGRSSSRISQLDGPIPDPY 694
YIPQQDGAGD + ++ G+G + + T + +MS RS+SRI QLDGPIP
Sbjct: 210 YIPQQDGAGDATHGDFEIEVSGRGISINSHHTISKGKMSADLERSTSRIPQLDGPIPYDD 269
Query: 693 DDVLSTPNIYNYQGVVNEDYNIVNTPAPNDVQAATPAAVTQNDVA-----XXXXXXXXXX 529
DDVLSTPNIYNY V +EDYNI NTPAP +V A+TPA + QN+V
Sbjct: 270 DDVLSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALLVQNEVGNDFDDDDDDEPPLNE 329
Query: 528 XXXXXXXXXXXXXXLNTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAAGEF 349
NT HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEF
Sbjct: 330 EDDDDLDDMEQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF 389
Query: 348 DF 343
+F
Sbjct: 390 EF 391