BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00006499
         (3126 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP02357.1| unnamed protein product [Coffea canephora]           1709   0.0  
ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1509   0.0  
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1504   0.0  
ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic...  1502   0.0  
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...  1498   0.0  
ref|XP_011085577.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1494   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1491   0.0  
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1486   0.0  
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1485   0.0  
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1476   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1462   0.0  
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...  1450   0.0  
ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1448   0.0  
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...  1448   0.0  
gb|KDO72326.1| hypothetical protein CISIN_1g036741mg [Citrus sin...  1445   0.0  
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1444   0.0  
ref|XP_012088094.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1441   0.0  
gb|KDP24319.1| hypothetical protein JCGZ_25615 [Jatropha curcas]     1441   0.0  
ref|XP_010029435.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1441   0.0  
gb|KCW56347.1| hypothetical protein EUGRSUZ_I02081 [Eucalyptus g...  1441   0.0  

>emb|CDP02357.1| unnamed protein product [Coffea canephora]
          Length = 1040

 Score = 1709 bits (4425), Expect = 0.0
 Identities = 847/897 (94%), Positives = 864/897 (96%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNL 2947
            AEA+AV STDVEEDTSVVAADEV ELLSEMKKEDRRQ+SFRW KHHR V+GMG KKYH L
Sbjct: 144  AEAIAVSSTDVEEDTSVVAADEVHELLSEMKKEDRRQMSFRWRKHHRAVYGMGSKKYHAL 203

Query: 2946 KRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 2767
            KRRQVKIETEAWEQAANEYKELLNDMC+HKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC
Sbjct: 204  KRRQVKIETEAWEQAANEYKELLNDMCEHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 263

Query: 2766 RLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIR 2587
            RL KSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIR
Sbjct: 264  RLRKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIR 323

Query: 2586 IHKFLEKTKRKKVNIDKKMEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDDS 2407
            IHKFLEKTK+KKVN + KMEG+MTTSV QEQEKLRRTVTNLMKKQKL VVQQIVKGQDDS
Sbjct: 324  IHKFLEKTKKKKVNEEMKMEGDMTTSVIQEQEKLRRTVTNLMKKQKLHVVQQIVKGQDDS 383

Query: 2406 KPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASRR 2227
            KPWSTEVKAKVGS LIELLLQTAYIQSPADQL DCPPDIRPAF+HTFRTVT   KS SRR
Sbjct: 384  KPWSTEVKAKVGSRLIELLLQTAYIQSPADQLADCPPDIRPAFIHTFRTVTNNTKSPSRR 443

Query: 2226 YGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQR 2047
            YGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQR
Sbjct: 444  YGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQR 503

Query: 2046 EAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPEE 1867
            EAVKRAPINQLRPVYEALDTLG+TKWRVNKRVLSVVDRIWASGGRLG+LVDRNDI LPEE
Sbjct: 504  EAVKRAPINQLRPVYEALDTLGNTKWRVNKRVLSVVDRIWASGGRLGNLVDRNDIALPEE 563

Query: 1866 PETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRGR 1687
            PETED+AILR          KENSERHSQRCDIELKLAVARRMKDE GFFYPHNLDFRGR
Sbjct: 564  PETEDEAILRKWKWKVKSIKKENSERHSQRCDIELKLAVARRMKDEGGFFYPHNLDFRGR 623

Query: 1686 AYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFT 1507
            AYPMHPHLNHLGSD+CRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFT
Sbjct: 624  AYPMHPHLNHLGSDVCRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFT 683

Query: 1506 ENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGS 1327
            ENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGS
Sbjct: 684  ENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGS 743

Query: 1326 CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALRA 1147
            CNGLQHYAALGRDKLGA+AVNLVAGEKPADVYSGIAARVLDIMKRDAQKDP VFPDALRA
Sbjct: 744  CNGLQHYAALGRDKLGASAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPAVFPDALRA 803

Query: 1146 RVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTL 967
            RVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADD+ELFGAACYAAKVTL
Sbjct: 804  RVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDAELFGAACYAAKVTL 863

Query: 966  TALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQVL 787
            TAL EMFEAARSIMSWLGECAKVIASENQ VRWMTPLGLPVVQPYRQ+GRHLIKTSLQVL
Sbjct: 864  TALEEMFEAARSIMSWLGECAKVIASENQTVRWMTPLGLPVVQPYRQLGRHLIKTSLQVL 923

Query: 786  TLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDVD 607
            TLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV+CRKAGLNFAGVHDSYWTHACDVD
Sbjct: 924  TLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDVD 983

Query: 606  EMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            EMNRILREKFVELYETPILENL E+FQKTFPSLSFPALPERGDFDLKDVLDSTYFFN
Sbjct: 984  EMNRILREKFVELYETPILENLLEDFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 1040


>ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 1021

 Score = 1509 bits (3906), Expect = 0.0
 Identities = 748/898 (83%), Positives = 810/898 (90%), Gaps = 1/898 (0%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNL 2947
            AEAVAV STD EED SVV  DEVQELL+E+KKE+++Q +FR  K      GMG +KY  L
Sbjct: 129  AEAVAVSSTDAEEDVSVV--DEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTL 186

Query: 2946 KRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 2767
            KRRQVK+ETEAWEQAA EYKELL DMC+ KLAPNLPY+KSLFLGWFEPL  KIAEEQELC
Sbjct: 187  KRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELC 246

Query: 2766 RLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIR 2587
              GKSKAAYAKY +QLPADMM+VITMHKLMGLLMTGG+HG+ARVV AA +IGDAIEQE+R
Sbjct: 247  SQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVR 306

Query: 2586 IHKFLEKTKRKKVNIDKKME-GEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDD 2410
            IH FLEKTK++K   DK+ E GE  T   QEQEKLR+ VTNLMKKQKLR V QIV+ QDD
Sbjct: 307  IHNFLEKTKKQKAEKDKQKEDGEHVT---QEQEKLRKKVTNLMKKQKLRAVGQIVRRQDD 363

Query: 2409 SKPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASR 2230
            SKPW  + KAKVGS LIELLLQTAYIQ PA+QL   PPDIRPAF+H+ RTV KE KSASR
Sbjct: 364  SKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASR 423

Query: 2229 RYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQ 2050
            RYGIIQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKGGHL+LPSYVMRTHGARQQ
Sbjct: 424  RYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQ 483

Query: 2049 REAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPE 1870
            REAVKRA  NQL+PV+EALDTLGSTKWR+NKRVLSVVDRIWA GGRL DLVDR+D PLPE
Sbjct: 484  REAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPE 543

Query: 1869 EPETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRG 1690
            EP+TED+A+            KEN ERHSQRCDIELKLAVAR+MKDEEGFFYPHN+DFRG
Sbjct: 544  EPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRG 603

Query: 1689 RAYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAF 1510
            RAYPMHPHLNHLGSDICRG+LEFAEGRPLG+SGL WLKIHLANLFA GV+KLS E RIAF
Sbjct: 604  RAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAF 663

Query: 1509 TENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDG 1330
            TENH++DIFDSAD+PLEGRRWWLNAEDPFQCLAVCINLSEA+RS SPET+ISHIPVHQDG
Sbjct: 664  TENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDG 723

Query: 1329 SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALR 1150
            SCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQ+DP  FPDA+R
Sbjct: 724  SCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVR 783

Query: 1149 ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT 970
            AR LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT
Sbjct: 784  ARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT 843

Query: 969  LTALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQV 790
            LTALGEMFEAARSIM+WLGECAK+IASEN+PVRW TPLGLPVVQPYR+IGRHLIKTSLQ+
Sbjct: 844  LTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQI 903

Query: 789  LTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDV 610
            LTLQRETEKVMVKRQRTAFPPNF+HSLDGSHMMMTAV+CR+AGLNFAGVHDSYWTHACDV
Sbjct: 904  LTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDV 963

Query: 609  DEMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            D++NRILREKFVELYETPILE L E+FQ ++P+L FP LPERGDFDL+DVL+S YFFN
Sbjct: 964  DKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            [Nicotiana tabacum] gi|21425665|emb|CAC95020.1|
            mitochondrial and chloroplast RNA polymerase [Nicotiana
            tabacum]
          Length = 1021

 Score = 1504 bits (3894), Expect = 0.0
 Identities = 745/898 (82%), Positives = 809/898 (90%), Gaps = 1/898 (0%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNL 2947
            AEAVAV STD EED SVV  DEVQELL+E+KKE+++Q +FR  K      GMG +KY  L
Sbjct: 129  AEAVAVSSTDAEEDVSVV--DEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTL 186

Query: 2946 KRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 2767
            KRRQVK+ETEAWEQAA EYKELL DMC+ KLAPNLPY+KSLFLGWFEPL  KIAEEQELC
Sbjct: 187  KRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELC 246

Query: 2766 RLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIR 2587
              GKSKAAYAKY +QLPADMM+VITMHKLMGLLMTGG+HG+ARVV AA +IGDAIEQE+R
Sbjct: 247  SQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVR 306

Query: 2586 IHKFLEKTKRKKVNIDKKME-GEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDD 2410
            IH FLEKTK++K   DK+ E GE  T   QEQEKLR+ VTNLMKKQKLR V QIV+ QDD
Sbjct: 307  IHNFLEKTKKQKAEKDKQKEDGEHVT---QEQEKLRKKVTNLMKKQKLRAVGQIVRRQDD 363

Query: 2409 SKPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASR 2230
            SKPW  + KAKVGS LIELLLQTAYIQ PA+QL   PPDIRPAF+H+ RTV KE KSASR
Sbjct: 364  SKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASR 423

Query: 2229 RYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQ 2050
            RYGIIQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKGGHL+LPSYVMRTHGARQQ
Sbjct: 424  RYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQ 483

Query: 2049 REAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPE 1870
            REAVKRA  NQL+PV+EALDTLGSTKWR+NKRVLSV+DRIWA GGRL DLVDR+D PLPE
Sbjct: 484  REAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPE 543

Query: 1869 EPETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRG 1690
            EP+TED+A+            KEN ERHSQRCDIELKLAVAR+MKDEEGFFYPHN+DFRG
Sbjct: 544  EPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRG 603

Query: 1689 RAYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAF 1510
            RAYPMHPHLNHLGSDICRG+L FAEGRPLG+SGL WLKIHLANLFA GV+KLS E RIAF
Sbjct: 604  RAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAF 663

Query: 1509 TENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDG 1330
            TENH++DIFDSAD+PLEGRRWWLNAEDPFQCLAVCINLSEA+RS SPET+ISHIPVHQDG
Sbjct: 664  TENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDG 723

Query: 1329 SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALR 1150
            SCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQ+DP  FPDA+R
Sbjct: 724  SCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVR 783

Query: 1149 ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT 970
            AR LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT
Sbjct: 784  ARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT 843

Query: 969  LTALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQV 790
            LTALGEMFEAARSIM+WLGECAK+IASEN+PVRW TPLGLPVVQPYR+IGRHLIKTSLQ+
Sbjct: 844  LTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQI 903

Query: 789  LTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDV 610
            LTLQ+ETEKVMVKRQRTAFPPNF+HSLDGSHMMMTAV+CR+AGLNFAGVHDSYWTHACDV
Sbjct: 904  LTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDV 963

Query: 609  DEMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            D++NRILREKFVELYETPILE L E+FQ ++P+L FP LPERGDFDL+DVL+S YFFN
Sbjct: 964  DKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021


>ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Nicotiana
            sylvestris] gi|90111039|sp|Q8VWF8.2|RPOT2_NICSY RecName:
            Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor [Nicotiana sylvestris]
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1502 bits (3888), Expect = 0.0
 Identities = 742/898 (82%), Positives = 808/898 (89%), Gaps = 1/898 (0%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNL 2947
            AEAVAV STD EED SVV  DEV ELL+E+KKE+++Q +FR  K      GMG +KY  L
Sbjct: 128  AEAVAVSSTDAEEDVSVV--DEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTL 185

Query: 2946 KRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 2767
            KRRQVK+ETEAWEQAA EYKELL DMC+ KLAPNLPY+KSLFLGWFEPL  KIAEEQELC
Sbjct: 186  KRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELC 245

Query: 2766 RLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIR 2587
              GKSKAAYAKYF+QLPADMM+VITMHKLMGLLMTGG+HG+ARVV AA +IGDAIEQE+R
Sbjct: 246  SQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVR 305

Query: 2586 IHKFLEKTKRKKVNIDKKME-GEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDD 2410
            IH FLEKTK++K   DK+ E GE  T   QEQEKLR+ VTNLMKKQKLR V QIV+ QDD
Sbjct: 306  IHNFLEKTKKQKAEKDKQKEDGEHVT---QEQEKLRKKVTNLMKKQKLRAVGQIVRRQDD 362

Query: 2409 SKPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASR 2230
            SKPW  + +AKVGS LI+LLLQTAYIQ PA+QL   PPDIRPAFVH+ RTV KE KSASR
Sbjct: 363  SKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASR 422

Query: 2229 RYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQ 2050
            RYGIIQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKGGHL+LPSYVMRTHGARQQ
Sbjct: 423  RYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQ 482

Query: 2049 REAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPE 1870
            REAVKRA  NQL+PV+EALDTLG+TKWR+NKRVLSVVDRIWA GGRL DLVDR+D PLPE
Sbjct: 483  REAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPE 542

Query: 1869 EPETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRG 1690
            EP+TED+A+            KEN ERHSQRCDIELKLAVAR+MKDEE FFYPHN+DFRG
Sbjct: 543  EPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRG 602

Query: 1689 RAYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAF 1510
            RAYPMHPHLNHLGSDICRG+LEFAEGRPLG+SGL WLKIHLANLFA GV+KLS E RI F
Sbjct: 603  RAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGF 662

Query: 1509 TENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDG 1330
            TENH++DIFDS+D+PLEGRRWWLNAEDPFQCLAVCINLSEA+RS SPET++SHIPVHQDG
Sbjct: 663  TENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDG 722

Query: 1329 SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALR 1150
            SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQ+DP  FPDA+R
Sbjct: 723  SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVR 782

Query: 1149 ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT 970
            ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT
Sbjct: 783  ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT 842

Query: 969  LTALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQV 790
            LTALGEMFEAARSIM+WLGECAK+IASEN+PVRW TPLGLPVVQPYR+IGRHLIKTSLQ+
Sbjct: 843  LTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQI 902

Query: 789  LTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDV 610
            LTLQRETEKVMVKRQRTAFPPNF+HSLDGSHMMMTAV+CR+AGLNFAGVHDSYWTHACDV
Sbjct: 903  LTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDV 962

Query: 609  DEMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            D++NRILREKFVELYE PILE L E+FQ ++P+L FP LPERGDFD++DVL+S YFFN
Sbjct: 963  DKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1498 bits (3878), Expect = 0.0
 Identities = 740/898 (82%), Positives = 807/898 (89%), Gaps = 1/898 (0%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNL 2947
            AEAVAV STD EED SVV  DEV ELL+E+KKE+++Q +FR  K      GMG +KY  L
Sbjct: 128  AEAVAVSSTDAEEDVSVV--DEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTL 185

Query: 2946 KRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 2767
            KRRQVK+ETEAWEQAA EYKELL DMC+ KLAPNLPY+KSLFLGWFEPL  KIAEEQELC
Sbjct: 186  KRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELC 245

Query: 2766 RLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIR 2587
              GKSKAAYAKYF+QLPADMM+VITMHKLMGLLMTGG+HG+ARVV AA +IGDAIEQE+R
Sbjct: 246  SQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVR 305

Query: 2586 IHKFLEKTKRKKVNIDKKME-GEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDD 2410
            IH FLEKTK++K   DK+ E GE  T   QEQEKLR+ VTNLMKKQKLR V QIV+ QDD
Sbjct: 306  IHNFLEKTKKQKAEKDKQKEDGEHVT---QEQEKLRKKVTNLMKKQKLRAVGQIVRRQDD 362

Query: 2409 SKPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASR 2230
            SKPW  + +AKVGS LI+LLLQTAYIQ PA+QL   PPDI PAFVH+ RTV KE KSASR
Sbjct: 363  SKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRTVAKETKSASR 422

Query: 2229 RYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQ 2050
            RYGIIQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKGGHL+LPSYVMRTHGARQQ
Sbjct: 423  RYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQ 482

Query: 2049 REAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPE 1870
            REAVKRA  NQL+PV+EALDTLG+TKWR+NKRVLSVVDRIWA GGRL DLVDR+D PLPE
Sbjct: 483  REAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPE 542

Query: 1869 EPETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRG 1690
            EP+TED+A+L           KEN ERHSQRCDIELKLAVAR+MKDEE FFYPHN+DFRG
Sbjct: 543  EPDTEDEALLPKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRG 602

Query: 1689 RAYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAF 1510
            RAYPMHPHLNHLGSDICRG+LEFAEGRPLG+SGL WLKIHLANLFA GV+KLS E RI F
Sbjct: 603  RAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGF 662

Query: 1509 TENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDG 1330
            TENH++DIFDS+D+PLEGRRWWLNAEDPFQCLAVCINLSEA+RS SPET++SHIPVHQDG
Sbjct: 663  TENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDG 722

Query: 1329 SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALR 1150
            SCNGLQHYAALGRDKLGAAAVNLVAGEKPA+ YSGIAARVLDIMKRDAQ+DP  FPDA+R
Sbjct: 723  SCNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIAARVLDIMKRDAQRDPAEFPDAVR 782

Query: 1149 ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT 970
            ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT
Sbjct: 783  ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT 842

Query: 969  LTALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQV 790
            LTALGEMFEAARSIM+WLGECAK+IASEN+PVRW TPLGLPVVQPYR+IGRHLIKTSLQ+
Sbjct: 843  LTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQI 902

Query: 789  LTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDV 610
            LTLQRETEKVMVKRQRTAFPPNF+HSLDGSHMMMTAV+CR+AGLNFAGVHDSYWTHACDV
Sbjct: 903  LTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDV 962

Query: 609  DEMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            D++NRILREKFVELYE PILE L E+FQ ++P+L FP LPERGDFD++DVL+S YFFN
Sbjct: 963  DKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020


>ref|XP_011085577.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Sesamum indicum]
          Length = 1032

 Score = 1494 bits (3868), Expect = 0.0
 Identities = 734/899 (81%), Positives = 809/899 (89%), Gaps = 2/899 (0%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSV--VAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYH 2953
            AEAVAV  TD+ E+ SV    ADEVQELL+E++KE+RRQ   RW +  R+V GMG ++Y 
Sbjct: 135  AEAVAVSQTDLVEENSVNVSVADEVQELLNEVRKEERRQYWTRW-RQRRSVRGMGNERYK 193

Query: 2952 NLKRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQE 2773
             L+RRQVKIETEAW QAA EY+ELLNDMC+ KLAPNLPYMKSLFLGWFEPL +KIAEEQE
Sbjct: 194  ALRRRQVKIETEAWGQAAKEYRELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQE 253

Query: 2772 LCRLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQE 2593
              R GKSKAAYAKYF  LPADMM+VITMHKLMGLLMTGGEHG ARVV AAC+IGDAIEQE
Sbjct: 254  FIRKGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMTGGEHGCARVVQAACIIGDAIEQE 313

Query: 2592 IRIHKFLEKTKRKKVNIDKKMEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQD 2413
            +RI  FLEKTK+KKV  + + EGE     NQEQEKL + VT L+KKQKL+ V+Q+V  Q 
Sbjct: 314  VRIQYFLEKTKKKKVQKNTEKEGEEFDGNNQEQEKLHQRVTMLIKKQKLQAVRQLVNRQI 373

Query: 2412 DSKPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSAS 2233
            + +PW  + KAKVGSHLIEL+LQTAYIQ PA+Q T+ PPDIRPAFVHT RTVTKE K++S
Sbjct: 374  EYQPWGQDAKAKVGSHLIELILQTAYIQPPANQSTEGPPDIRPAFVHTMRTVTKETKTSS 433

Query: 2232 RRYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQ 2053
            +RYG+IQCDPLV KGLERTARHMVIPYMPMLVPPVKWTGYDKG +L+LPSYVMRTHGARQ
Sbjct: 434  KRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYLYLPSYVMRTHGARQ 493

Query: 2052 QREAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLP 1873
            QRE+VKRAP  QL+PV+EALDTLGST+WRVNKRVLS++DRIWASGG LGDLVDR+DIPLP
Sbjct: 494  QRESVKRAPTEQLKPVFEALDTLGSTRWRVNKRVLSIIDRIWASGGCLGDLVDRSDIPLP 553

Query: 1872 EEPETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFR 1693
            E P+TED+A+L+          KENSERHS RCD ELKLAVAR+MK+EEGFFYPHNLDFR
Sbjct: 554  ERPDTEDEALLKKWKWKVKSIKKENSERHSIRCDTELKLAVARKMKEEEGFFYPHNLDFR 613

Query: 1692 GRAYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIA 1513
            GRAYPMHPHLNHLGSDICRG+LEF+EGRPLGKSGL WLKIHLANLFANGVDKLSHE R+A
Sbjct: 614  GRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLRWLKIHLANLFANGVDKLSHEGRLA 673

Query: 1512 FTENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQD 1333
            FTENHL+DI DSADRPLEG+RWWLNAEDPFQCLA CINL+EALRS SPETTISHIPVHQD
Sbjct: 674  FTENHLDDIIDSADRPLEGKRWWLNAEDPFQCLAACINLAEALRSPSPETTISHIPVHQD 733

Query: 1332 GSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDAL 1153
            GSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL IMK DAQKDP VFPDAL
Sbjct: 734  GSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLKIMKDDAQKDPAVFPDAL 793

Query: 1152 RARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKV 973
            RAR+L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADD+ELFGAACYAAK+
Sbjct: 794  RARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDAELFGAACYAAKI 853

Query: 972  TLTALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQ 793
            TLTALG+MFEAARSIM+WLGECAK+IASEN+PV W TPLGLPVVQPYR++GRHLIKTSLQ
Sbjct: 854  TLTALGQMFEAARSIMTWLGECAKIIASENEPVCWTTPLGLPVVQPYRKVGRHLIKTSLQ 913

Query: 792  VLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACD 613
            VLTLQRE+EKVMVKRQRTAFPPNFVHSLDGSHMMMTA++C+KAGLNFAGVHDSYWTHACD
Sbjct: 914  VLTLQRESEKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACD 973

Query: 612  VDEMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            VDEMNRILREKFVELYE PILENL E FQ++FPSL+FP LP+RGDFDLK+VL S YFFN
Sbjct: 974  VDEMNRILREKFVELYEAPILENLLEGFQQSFPSLTFPPLPDRGDFDLKEVLQSPYFFN 1032


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|731418092|ref|XP_010660553.1|
            PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|298204431|emb|CBI16911.3| unnamed protein product
            [Vitis vinifera]
          Length = 1035

 Score = 1491 bits (3860), Expect = 0.0
 Identities = 730/896 (81%), Positives = 799/896 (89%), Gaps = 1/896 (0%)
 Frame = -1

Query: 3120 AVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNLKR 2941
            A AV STDVEED S  A+DE+QELL EMKKE++RQV+F+  +  +   GM + +Y  L+R
Sbjct: 142  AEAVSSTDVEEDVS--ASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLRR 199

Query: 2940 RQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELCRL 2761
            RQVKIETEAWE AA EYKELL DMC+ KLAPNLPYMKSLFLGWFEPL   I +EQELCRL
Sbjct: 200  RQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRL 259

Query: 2760 GKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIRIH 2581
            GK+KAAYA YF QLPADMMSVITMHKL+GLLMTGGEHGS RVV AAC+IGDAIEQE+RIH
Sbjct: 260  GKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIH 319

Query: 2580 KFLEKTKRKKVNIDKKMEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDDSKP 2401
             FLEKTKRKKV  DK +EG     V  EQEKLR+ VTNLMKKQKL   +QIVKG D+SKP
Sbjct: 320  NFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKP 379

Query: 2400 WSTEVKAKVGSHLIELLLQTAYIQSPAD-QLTDCPPDIRPAFVHTFRTVTKEPKSASRRY 2224
            W  E KAKVGS LIELL+QTAYIQ P D QL D PPDIRPAFVHTF+TV +E K   RR+
Sbjct: 380  WGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRRF 439

Query: 2223 GIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQRE 2044
            G+I+CDPLV KGLERTARHMVIPY+PMLVPP+KWTGYDKG HLFLPSYVMRTHGARQQRE
Sbjct: 440  GVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQRE 499

Query: 2043 AVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPEEP 1864
            AVKRAP NQL PV+EAL+TLG+TKWR+NKR+  VVDRIWA GG L DLVDRND+PLPE+P
Sbjct: 500  AVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKP 559

Query: 1863 ETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRGRA 1684
            +TED+A LR          K NSERHSQRCDIELKLAVAR+MKDE+GFFYPHNLDFRGRA
Sbjct: 560  DTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRA 619

Query: 1683 YPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFTE 1504
            YPMHP+LNHLGSD+CRG+LEFAEGRPLG SGLHWLKIHLANLFA GVDKLSHE RI FTE
Sbjct: 620  YPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTE 679

Query: 1503 NHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGSC 1324
            NHL+DIFDSADRPLEG+RWWLNAEDPFQ LA CINLSEALRS SPETTISHIPVHQDGSC
Sbjct: 680  NHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSC 739

Query: 1323 NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALRAR 1144
            NGLQHYAALGRD+LGA AVNLVAGEKPADVYSGIAARVLDIMKRDA+KDP +FPDALRAR
Sbjct: 740  NGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRAR 799

Query: 1143 VLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLT 964
            +L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AIADD ELFGAACYAAK+TLT
Sbjct: 800  ILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLT 859

Query: 963  ALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQVLT 784
            ALGEMF+AARSIMSWLG+CAK+IASENQPVRW TPLGLPVVQPYR++GRHLIKTSLQVLT
Sbjct: 860  ALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLT 919

Query: 783  LQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDVDE 604
            LQRETE +MVKRQRTAFPPNFVHSLDGSHMMMTA++C+KAGLNFAGVHDSYWTHACDVDE
Sbjct: 920  LQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDE 979

Query: 603  MNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            MNR+LREKFV+LYETPILENL E+FQ++FP+L FP LPERGDFDL++VL+S YFFN
Sbjct: 980  MNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score = 1486 bits (3846), Expect = 0.0
 Identities = 738/898 (82%), Positives = 800/898 (89%), Gaps = 1/898 (0%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNL 2947
            AEAVAV STD EED SVV   EVQELL+E+KKE+++Q +FR         G+ R+KY  L
Sbjct: 127  AEAVAVSSTDAEEDVSVVG--EVQELLTELKKEEKKQFTFRRRNQRLLTSGIDRRKYPAL 184

Query: 2946 KRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 2767
            KRRQVKIET+AWE AA EY+ELL DMC+ KLAPNLPY+KSLFLGWFEPL  KIA+EQELC
Sbjct: 185  KRRQVKIETQAWELAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQEQELC 244

Query: 2766 RLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIR 2587
              GKSKAAY+KYFH LPADMM+VITMHKLMGLLMTGGEHG+ARVV AA  IGDAIEQE+R
Sbjct: 245  IQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEHGNARVVQAALTIGDAIEQEVR 304

Query: 2586 IHKFLEKTKRKKVNIDKKME-GEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDD 2410
            IHKFLEKT++ K   D+KME GE  T    EQ+KL + VT+LMKKQKLR V QIV+ QDD
Sbjct: 305  IHKFLEKTEKHKAEKDRKMEDGEHATL---EQKKLHKKVTSLMKKQKLRAVNQIVRSQDD 361

Query: 2409 SKPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASR 2230
            SKPW  + KAKVGS LIE LLQTAYIQSPADQL   PPDIRPAF+H+ RTV KE KSASR
Sbjct: 362  SKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTVAKETKSASR 421

Query: 2229 RYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQ 2050
            RYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKGGHL+LPSYVMRTHGARQQ
Sbjct: 422  RYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQ 481

Query: 2049 REAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPE 1870
            REAVKRA  NQLRPV+EALDTLGSTKWR+NKRVLSVVDRIWA GGRL DLVDR+D PLPE
Sbjct: 482  REAVKRASRNQLRPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPE 541

Query: 1869 EPETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRG 1690
            EP+TED+A+            KEN ERHSQRCDIELKLAVA RMKDEEGFFYPHN+DFRG
Sbjct: 542  EPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHNVDFRG 601

Query: 1689 RAYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAF 1510
            RAYPMHPHLNHLGSDICRG+LEFA GRPLG+SGL WLKIHLANLFA GVDKLS + RIAF
Sbjct: 602  RAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLANLFAGGVDKLSLDGRIAF 661

Query: 1509 TENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDG 1330
            TE+HL+DIFDSAD+PLEGRRWWLNAEDPFQCLAVCINLSEA+RS SPET ISHIPVHQDG
Sbjct: 662  TESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHIPVHQDG 721

Query: 1329 SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALR 1150
            SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM RDAQ+DP  FPDA+R
Sbjct: 722  SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVR 781

Query: 1149 ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT 970
            ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAA YAAKVT
Sbjct: 782  ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAASYAAKVT 841

Query: 969  LTALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQV 790
            LTALGEMFEAARSIM+WL ECAK+IASEN+PVRW TPLGLPVVQPYR+IGRH IKTSLQ+
Sbjct: 842  LTALGEMFEAARSIMTWLAECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQI 901

Query: 789  LTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDV 610
            LTLQRETEKVMVKRQRTAFPPNF+HSLDGSHMMMTAV+CR+AGLNFAGVHDSYWTHACDV
Sbjct: 902  LTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDV 961

Query: 609  DEMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            D++NRILREKFVELYETPILE L E+FQ ++P+LSFP LPERGDFDL+DV++S YFFN
Sbjct: 962  DKLNRILREKFVELYETPILEKLLESFQVSYPTLSFPPLPERGDFDLRDVIESPYFFN 1019


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Solanum lycopersicum]
          Length = 1022

 Score = 1485 bits (3844), Expect = 0.0
 Identities = 734/898 (81%), Positives = 799/898 (88%), Gaps = 1/898 (0%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNL 2947
            AEAVAV STD EED SVV   EVQELL+E+KKE+++Q +FR  K      G+ R+KY  L
Sbjct: 130  AEAVAVSSTDAEEDVSVVG--EVQELLTELKKEEKKQFTFRRRKQRMLTSGIDRRKYPAL 187

Query: 2946 KRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 2767
             RRQVKIET+AWEQAA EY+ELL DMC+ KLAPNLPY+KSLFLGWFEPL  KIA+EQELC
Sbjct: 188  MRRQVKIETQAWEQAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQEQELC 247

Query: 2766 RLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIR 2587
              GKSKAAY+KYFH LPADMM+VITMHKLMGLLMTGGEHG+ RVV AA  IGDAIEQE+R
Sbjct: 248  IQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEHGNVRVVQAALTIGDAIEQEVR 307

Query: 2586 IHKFLEKTKRKKVNIDKKME-GEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDD 2410
            IHKFLEKT++ K   D+ ME GE  T    EQ+KL + VT+LMKKQKLR V QIV+ QDD
Sbjct: 308  IHKFLEKTEKHKAEKDRNMEDGEHATL---EQKKLHKKVTSLMKKQKLRAVNQIVRSQDD 364

Query: 2409 SKPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASR 2230
            SKPW  + KAKVGS LIE LLQTAYIQSPADQL   PPDIRPAF+H+ RT+ KE KSASR
Sbjct: 365  SKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTLAKETKSASR 424

Query: 2229 RYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQ 2050
            RYG+IQCD LV KGLERTARHMVIPYMPMLVPPVKWTGYDKGGHL+LPSYVMRTHGARQQ
Sbjct: 425  RYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQ 484

Query: 2049 REAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPE 1870
            REAVKR   NQL+PV+EALDTLGSTKWR+NKRVLSVVDRIWA GGRL DLVDR+D+PLPE
Sbjct: 485  REAVKRTSRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDVPLPE 544

Query: 1869 EPETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRG 1690
            EP+TED+A+            KEN ERHSQRCDIELKLAVA RMKDEEGFFYPHN+DFRG
Sbjct: 545  EPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHNVDFRG 604

Query: 1689 RAYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAF 1510
            RAYPMHPHLNHLGSDICRG+LEFA GRPLGKSGL WLKIHLANLFA GVDKLS + RIAF
Sbjct: 605  RAYPMHPHLNHLGSDICRGVLEFAAGRPLGKSGLRWLKIHLANLFAGGVDKLSLDGRIAF 664

Query: 1509 TENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDG 1330
            TE+HL+DIFDSAD+PLEGR WWLNAEDPFQCLAVCINLSEA+RS SPET ISH+PVHQDG
Sbjct: 665  TESHLDDIFDSADKPLEGRCWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHVPVHQDG 724

Query: 1329 SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALR 1150
            SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM RDAQ+DP  FPDA+R
Sbjct: 725  SCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVR 784

Query: 1149 ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVT 970
            ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADD+ELFGAACYAAKVT
Sbjct: 785  ARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDTELFGAACYAAKVT 844

Query: 969  LTALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQV 790
            LTALGEMFEAARSIM+WLGECAK+IASEN+PVRW TPLGLPVVQPYR+IGRH IKTSLQ+
Sbjct: 845  LTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQI 904

Query: 789  LTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDV 610
            LTLQRETEKVMVKRQRTAFPPNF+HSLDGSHMMMTAV+CR+AGLNFAGVHDSYWTHACDV
Sbjct: 905  LTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDV 964

Query: 609  DEMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            D++NRILREKFVELYETPILE L E FQ ++P+LSFP LPERGDFDL+DV++S YFFN
Sbjct: 965  DKLNRILREKFVELYETPILEKLLEGFQVSYPTLSFPPLPERGDFDLRDVIESPYFFN 1022


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1476 bits (3820), Expect = 0.0
 Identities = 724/895 (80%), Positives = 798/895 (89%)
 Frame = -1

Query: 3120 AVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNLKR 2941
            A AV S D EED S +  DE+QELL EM KE+++++  R  K  + V GMG+ KY  L+R
Sbjct: 140  AEAVCSMDAEEDLSAI--DEIQELLEEMGKEEKKELELRDQKQIKLVGGMGQGKYLLLRR 197

Query: 2940 RQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELCRL 2761
            RQVKIETEAWEQAA EY+ELL DMC+ KLAPNLPYMKSLFLGWFEPL   I  EQELCR 
Sbjct: 198  RQVKIETEAWEQAAKEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRK 257

Query: 2760 GKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIRIH 2581
            GK++ AYA YF QLPA+MMSVITMHKLMGLLMTGGEHGS RVV AAC IG+AIE E+RIH
Sbjct: 258  GKNRTAYAPYFDQLPAEMMSVITMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVRIH 317

Query: 2580 KFLEKTKRKKVNIDKKMEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDDSKP 2401
            KFLEKT RKK + DKK +G  +  V +EQ++LR+ VT+LMKKQKL+ V+QIVKGQDDSKP
Sbjct: 318  KFLEKT-RKKTDKDKKADGGESDPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQDDSKP 376

Query: 2400 WSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASRRYG 2221
            W  + +AKVGS LIELL+QTAYIQ P DQL D PPDIRPAF H+ +TVTKE +  SRRYG
Sbjct: 377  WGQDAQAKVGSRLIELLMQTAYIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRRYG 436

Query: 2220 IIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQREA 2041
            +I+CDPLV KGLERTARHMVIPYMPMLVPPV WTGYDKG +LFLPSYVMRTHGARQQREA
Sbjct: 437  VIECDPLVRKGLERTARHMVIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREA 496

Query: 2040 VKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPEEPE 1861
            VKRAP  QL PV+EALDTLG+TKWRVNKRVLSVVDRIWASGGRL DLVDR D+P+PEEP+
Sbjct: 497  VKRAPRKQLEPVFEALDTLGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPD 556

Query: 1860 TEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRGRAY 1681
            TED+A ++          KENSERHSQRCDIELKLAVARRMKDE+GFFYPHNLDFRGRAY
Sbjct: 557  TEDEAEIKKWKWKVKAAKKENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAY 616

Query: 1680 PMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFTEN 1501
            PMHP+LNHLGSD+CRG+LEFAEGRPLGKSGL WLKIHLANL+A GVDKLS+E RIAFTEN
Sbjct: 617  PMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFTEN 676

Query: 1500 HLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGSCN 1321
            HL+DIFDSADRPLEGRRWWLNAEDPFQCLA CINLSEALRS SPETTISH+PVHQDGSCN
Sbjct: 677  HLDDIFDSADRPLEGRRWWLNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCN 736

Query: 1320 GLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALRARV 1141
            GLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM+RDA+KDP   P+A+ AR+
Sbjct: 737  GLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARI 796

Query: 1140 LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTA 961
            L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  IADDSELFGA+CYAAK TLTA
Sbjct: 797  LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNVIADDSELFGASCYAAKTTLTA 856

Query: 960  LGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQVLTL 781
            LGEMFEAARSIMSWLG+CAK+IASENQPVRW TPLGLPVVQPYR++GRHLIKTSLQVLTL
Sbjct: 857  LGEMFEAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTL 916

Query: 780  QRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDVDEM 601
            QRET+KVMVKRQRTAFPPNFVHSLDGSHMMMTAV+CRKAGLNFAGVHDSYWTHACD+DEM
Sbjct: 917  QRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDIDEM 976

Query: 600  NRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            N+ILREKFVELYE PILENL E+FQ++FP+L+FP LPERGDFDL++VLDS YFFN
Sbjct: 977  NKILREKFVELYEKPILENLLESFQQSFPTLNFPPLPERGDFDLREVLDSPYFFN 1031


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1462 bits (3784), Expect = 0.0
 Identities = 719/895 (80%), Positives = 797/895 (89%)
 Frame = -1

Query: 3120 AVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNLKR 2941
            A  + STD EED SVV  DE+QELL EM KE++ ++ F   K  + V GMG+ KY  L+R
Sbjct: 100  AEVLSSTDAEEDVSVV--DEIQELLEEMSKEEK-ELEFSHQKQTKLVGGMGQGKYLLLRR 156

Query: 2940 RQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELCRL 2761
            RQVKIETEAWEQAA EYKELL DMC+ KLAPNLPYMKSLFLGWFEPL   IA EQELCR 
Sbjct: 157  RQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRK 216

Query: 2760 GKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIRIH 2581
            GK++AAYA YF QLPA+MMSVITMHKL+GLLMTGGEHGSARVV AACLIG AIE E+RI+
Sbjct: 217  GKNRAAYAPYFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIY 276

Query: 2580 KFLEKTKRKKVNIDKKMEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDDSKP 2401
            KFLEKTK KK + DKK EG  +    +EQ++LR+ VT+LMKKQKL+ V+QIVK QDDSKP
Sbjct: 277  KFLEKTK-KKTDKDKKAEGGESDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKP 335

Query: 2400 WSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASRRYG 2221
            W  + +AKVGSHLIELL+QTAYIQSPADQL D PPDIRPAF HT +T+TKE +  SRRYG
Sbjct: 336  WGQDAQAKVGSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYG 395

Query: 2220 IIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQREA 2041
            +I+CDPLV KGLERTARHMVIPYMPMLVPP+ WTGYDKG +LFLPSYVMRTHGARQQREA
Sbjct: 396  LIECDPLVRKGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREA 455

Query: 2040 VKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPEEPE 1861
            VKR    QL P++EALDTLG+TKWR+NKRVL VVDRIWASGGRL DLVDR D+PLPEEPE
Sbjct: 456  VKRTSRKQLEPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPE 515

Query: 1860 TEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRGRAY 1681
            TED+A L+          KENSERHSQRCD ELKLAVARRMKDE GFFYPHNLDFRGRAY
Sbjct: 516  TEDEAELKKWKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAY 575

Query: 1680 PMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFTEN 1501
            PMHP+LNHLGSD+CRG+LEFAEGRPLGKSGL WLKIHLANL+A GVDKLS+E RIAFTEN
Sbjct: 576  PMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTEN 635

Query: 1500 HLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGSCN 1321
            HL+DIFDSADRPLEGRRWWLNA+DPFQCLAVCINLSEALRS SPET ISHIP+HQDGSCN
Sbjct: 636  HLDDIFDSADRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCN 695

Query: 1320 GLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALRARV 1141
            GLQHYAALGRDKLGAAAVNLVAG+KPADVYSG+AARVLDIM+RDAQKDPT  P+A+ AR+
Sbjct: 696  GLQHYAALGRDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARL 755

Query: 1140 LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTA 961
            L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AIAD+SELFGA+CYAAK T+TA
Sbjct: 756  LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTITA 815

Query: 960  LGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQVLTL 781
            LGEMF+AARSIMSWLG+CAK+IASENQPVRW TPLGLPVVQPYR++GRHLIKTSLQVLTL
Sbjct: 816  LGEMFKAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTL 875

Query: 780  QRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDVDEM 601
            QRET+KVMVKRQRTAFPPNF+HSLDGSHMMMTAV+C++AGLNFAGVHDS+WTHACDVDEM
Sbjct: 876  QRETDKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACKRAGLNFAGVHDSFWTHACDVDEM 935

Query: 600  NRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            N+ILREKFVELYETPI+ENL E+FQ++FP+LSFP LPE GDFDL +VL S YFFN
Sbjct: 936  NKILREKFVELYETPIMENLLESFQQSFPALSFPPLPECGDFDLHEVLVSPYFFN 990


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
            gi|462411068|gb|EMJ16117.1| hypothetical protein
            PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score = 1450 bits (3754), Expect = 0.0
 Identities = 704/895 (78%), Positives = 788/895 (88%)
 Frame = -1

Query: 3120 AVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNLKR 2941
            A AV STDVEE+ SVV  DEVQELL +M  E++R+  ++         GMG+ KYH LKR
Sbjct: 134  AEAVSSTDVEEEVSVV--DEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKR 191

Query: 2940 RQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELCRL 2761
            RQ+KIETEAWE+AA EY+EL+ DMC+ KLAPNLPYMKSLFLGWFEPL + I +EQ+LCR 
Sbjct: 192  RQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRK 251

Query: 2760 GKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIRIH 2581
            GK+K AYA Y  QLPADMMSVITMHKLMGLLMTGGEHG+ RVV AAC IG+AIEQE+RIH
Sbjct: 252  GKNKTAYAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIH 311

Query: 2580 KFLEKTKRKKVNIDKKMEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDDSKP 2401
            KFLE T++KKV  DK  E   + +  +E+EKL + VTNLMKKQKL+ V+ IV   D SK 
Sbjct: 312  KFLEMTRKKKV--DKDQENGESDAAKKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKS 369

Query: 2400 WSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASRRYG 2221
            WS E +AKVGS LIELL QTA+IQ PADQL D PPDIRPAFVHTFRTV K+ K+ASRRYG
Sbjct: 370  WSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYG 429

Query: 2220 IIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQREA 2041
            +I+CDPLVLKGLE+TARHMVIPYMPMLVPP+ WTGYDKGG+ FLPSYVMR HGARQQREA
Sbjct: 430  VIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREA 489

Query: 2040 VKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPEEPE 1861
            +KR P  QL PV++ALD LG+T+WRVNKRVLSVVDRIWASGG L DLVDRND+PLPEEP+
Sbjct: 490  IKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPD 549

Query: 1860 TEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRGRAY 1681
            TED+ +L+          KEN ERHSQRCD ELKLAVAR+MKDEEGF+YPHNLDFRGRAY
Sbjct: 550  TEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAY 609

Query: 1680 PMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFTEN 1501
            PMHP+LNHLGSD+CRG+LEF EGRPLGKSGL WLKIHLANL+A GVDKLS E RIAFTEN
Sbjct: 610  PMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTEN 669

Query: 1500 HLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGSCN 1321
            HL+DIFDS D+PLEGRRWWL AEDPFQCLAVCINL+EALRS SPET ISHIPVHQDGSCN
Sbjct: 670  HLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCN 729

Query: 1320 GLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALRARV 1141
            GLQHYAALGRDKLGAA+VNLV GEKPADVYSGIA RVL+IM+RDAQKDP VFP+ALRA++
Sbjct: 730  GLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKL 789

Query: 1140 LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTA 961
            L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG+I+DD+E+FG ACYAAK+TLTA
Sbjct: 790  LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTA 849

Query: 960  LGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQVLTL 781
            LGEMFEAAR IMSWLGECAK+IASENQPVRW TPLGLPVVQPYR+ GRHLIKTSLQVLTL
Sbjct: 850  LGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTL 909

Query: 780  QRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDVDEM 601
            QRETEKVMVKRQRTAFPPNFVHSLD SHMMMTA++C+KAGL+FAGVHDSYWTHACDVDEM
Sbjct: 910  QRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEM 969

Query: 600  NRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            N+ILREKFV+LYETPILENL E+FQ++FP+L+FP LPERGDFDL+DVL+S YFFN
Sbjct: 970  NKILREKFVQLYETPILENLLESFQQSFPALTFPPLPERGDFDLRDVLESPYFFN 1024


>ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X1 [Prunus mume]
          Length = 1024

 Score = 1448 bits (3749), Expect = 0.0
 Identities = 704/895 (78%), Positives = 787/895 (87%)
 Frame = -1

Query: 3120 AVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNLKR 2941
            A AV STDVEED SVV  DEVQELL +M  E++R+  ++         GMG+ KYH LKR
Sbjct: 134  AEAVSSTDVEEDVSVV--DEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKR 191

Query: 2940 RQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELCRL 2761
            RQ+KIETEAWE+AA EY+EL+ DMC+ KLAPNLPYMKSLFLGWFEPL + I  EQ+LCR 
Sbjct: 192  RQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDNEQDLCRK 251

Query: 2760 GKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIRIH 2581
            GK KAAYA Y  QLPADMMSVITMHKLMGLLMTGGEHG+ RVV AAC IG+AIEQE+RIH
Sbjct: 252  GKKKAAYAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIH 311

Query: 2580 KFLEKTKRKKVNIDKKMEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDDSKP 2401
            KFLE T++KKV  DK  E   + +  +E+EKL + VTNLMKKQKL+ V+ IV   D SK 
Sbjct: 312  KFLEMTRKKKV--DKDQENGESDAAMKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKS 369

Query: 2400 WSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASRRYG 2221
            WS E +AK+GS LIELL QTA+IQ PADQL D PPDIRPAFVHTFRTV K+ K+ASRRYG
Sbjct: 370  WSLEARAKIGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYG 429

Query: 2220 IIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQREA 2041
            +I+CDPLVLKGLE+TARH++IPYMPMLVPP+ WTGYDKGG+ FLPSYVMR HGARQQREA
Sbjct: 430  VIECDPLVLKGLEKTARHVMIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREA 489

Query: 2040 VKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPEEPE 1861
            +KR P  QL PV++ALD LG+T+WRVNKRVLSVVDRIWASGG L DLVDRND+PLPEEP+
Sbjct: 490  IKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPD 549

Query: 1860 TEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRGRAY 1681
            TED+ +L+          KEN ERHSQRCDIELKLAVAR+MKDEEGF+YPHNLDFRGRAY
Sbjct: 550  TEDETLLKKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAY 609

Query: 1680 PMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFTEN 1501
            PMHP+LNHLGSD+CRG+LEF EGRPLGKSGL WLKIHLANL+A GVDKLS E RIAFTEN
Sbjct: 610  PMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTEN 669

Query: 1500 HLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGSCN 1321
            HL+DIFDS D PLEGRRWWL AEDPFQCLAVCINL+EALRS SPET ISHIPVHQDGSCN
Sbjct: 670  HLDDIFDSVDIPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCN 729

Query: 1320 GLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALRARV 1141
            GLQHYAALGRDKLGAA+VNLV GEKPADVYSGIA RVL+IM+RDAQKDPTVFP+AL A++
Sbjct: 730  GLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPTVFPEALHAKL 789

Query: 1140 LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTA 961
            L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG+I+DD+E+FG ACYAAK+TLTA
Sbjct: 790  LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTA 849

Query: 960  LGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQVLTL 781
            LGEMFEAAR IMSWLGECAK+IASENQPVRW TPLGLPVVQPYR+ GRHLIKTSLQVLTL
Sbjct: 850  LGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTL 909

Query: 780  QRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDVDEM 601
            QRETEKVMVKRQRTAFPPNFVHSLD SHMMMTA++C+KAGL+FAGVHDSYWTHACDVDEM
Sbjct: 910  QRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEM 969

Query: 600  NRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            N+ILREKFVELYETPILENL ++FQ++FP+L+FP LPERGDFDL+DVL+S YFFN
Sbjct: 970  NKILREKFVELYETPILENLLKSFQQSFPALTFPPLPERGDFDLRDVLESPYFFN 1024


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533045|gb|ESR44228.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score = 1448 bits (3749), Expect = 0.0
 Identities = 711/897 (79%), Positives = 790/897 (88%), Gaps = 2/897 (0%)
 Frame = -1

Query: 3120 AVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTV-HGMGRKKYHNLK 2944
            A AV STDVEED S+V  +E+QELL EMKKE++R+      ++ R V  GMG  KY  LK
Sbjct: 136  AEAVSSTDVEEDVSIV--EEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLK 193

Query: 2943 RRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELCR 2764
             RQVKIETEAWEQAANEY+ELL DMC+ KLAPNLPYMKSLFLGWFEPL   IA+EQE CR
Sbjct: 194  MRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCR 253

Query: 2763 LGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIRI 2584
            + K K AYA YF QLPADMM+VITMHKLMGLLMTGGEHG ARVV AAC+IGDAIEQE+RI
Sbjct: 254  MAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRI 313

Query: 2583 HKFLEKTKRKKVNIDKK-MEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDDS 2407
            HKFLEKTK+K    +K+  EG+ + +V  EQEKLR+ VT+L+KKQKL  V++IVKGQDD 
Sbjct: 314  HKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDF 373

Query: 2406 KPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASRR 2227
            KPW  + +AKVGS +IELL QTAYIQSPADQL D PPDI PAF HT RTV+KE K  S++
Sbjct: 374  KPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTVSKETKGGSKK 433

Query: 2226 YGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQR 2047
            YG+I+C+PLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKG H FLPSYVMRTHGA+QQR
Sbjct: 434  YGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQR 493

Query: 2046 EAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPEE 1867
            + VKR P  QL PV+EALDTLG+TKWRVN RVLSV+DRIW+ GGRL DLVDRND+PLPE+
Sbjct: 494  DTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEK 553

Query: 1866 PETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRGR 1687
            PETED+A LR          KEN ERHSQRCDIELKL+VAR+MKDEEGF+YPHN+DFRGR
Sbjct: 554  PETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGR 613

Query: 1686 AYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFT 1507
            AYPMHP+LNHLGSD+CRG+LEFAEGR LGKSGLHWLKIHLANL+A GVDKLSHE R+AFT
Sbjct: 614  AYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFT 673

Query: 1506 ENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGS 1327
            ENHL+DIFDSAD+PLEGRRWWL AEDPFQCLAVCINL+EALRS SPET ISHIPVHQDGS
Sbjct: 674  ENHLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGS 733

Query: 1326 CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALRA 1147
            CNGLQHYAALGRD LGAAAVNLVA EKPADVYSGIAARVL I++RDAQ+DP VFPDALRA
Sbjct: 734  CNGLQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARVLVIIRRDAQRDPAVFPDALRA 793

Query: 1146 RVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTL 967
            ++L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGA  +++ELFGA+CYAAKVTL
Sbjct: 794  KLLLSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAPMEEAELFGASCYAAKVTL 853

Query: 966  TALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQVL 787
            TALGEMF+AAR IMSWLGECAK+IASENQPVRW TPLGLPVVQPYR++GRH +KTSLQ+L
Sbjct: 854  TALGEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKLGRHTVKTSLQIL 913

Query: 786  TLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDVD 607
            TLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV+CRKAGL FAGVHDSYWTHACDVD
Sbjct: 914  TLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLTFAGVHDSYWTHACDVD 973

Query: 606  EMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            EMNRILREKFVELYE PILENL ++FQK+FP L  P LPERGDFDL++VL S YFFN
Sbjct: 974  EMNRILREKFVELYEMPILENLLDSFQKSFPKLVLPPLPERGDFDLREVLGSPYFFN 1030


>gb|KDO72326.1| hypothetical protein CISIN_1g036741mg [Citrus sinensis]
          Length = 1030

 Score = 1445 bits (3740), Expect = 0.0
 Identities = 709/897 (79%), Positives = 789/897 (87%), Gaps = 2/897 (0%)
 Frame = -1

Query: 3120 AVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTV-HGMGRKKYHNLK 2944
            A AV STDVEED S+V  +E+QELL EMKKE++R+      ++ R V  GMG  KY  LK
Sbjct: 136  AEAVSSTDVEEDVSIV--EEIQELLQEMKKEEQREGENGSGRNRRRVARGMGSGKYRMLK 193

Query: 2943 RRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELCR 2764
             RQVKIETEAWE+AANEY+ELL DMC+ KLAPNLPYMKSLFLGWFEPL   IA+EQE CR
Sbjct: 194  MRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCR 253

Query: 2763 LGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIRI 2584
            + K K AYA YF QLPADMM+VITMHKLMGLLMTGGEHG ARVV AAC+IGDAIEQE+RI
Sbjct: 254  MAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRI 313

Query: 2583 HKFLEKTKRKKVNIDKK-MEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDDS 2407
            HKFLEKTK+K    +K+  EG+ + +V  EQEKLR+ VT+L+KKQKL  V++IVKGQDD 
Sbjct: 314  HKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDF 373

Query: 2406 KPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASRR 2227
            KPW  + +AKVGS +IELL QTAYIQSPADQL D PPDI PAF H  RTV+KE K  S++
Sbjct: 374  KPWGQDARAKVGSRVIELLTQTAYIQSPADQLADAPPDIFPAFTHALRTVSKETKGGSKK 433

Query: 2226 YGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQR 2047
            YG+I+C+PLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKG H FLPSYVMRTHGA+QQR
Sbjct: 434  YGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQR 493

Query: 2046 EAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPEE 1867
            + VKR P  QL PV+EALDTLG+TKWRVN RVLSV+DRIW+ GGRL DLVDRND+PLPE+
Sbjct: 494  DTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEK 553

Query: 1866 PETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRGR 1687
            PETED+A LR          KEN ERHSQRCDIELKL+VAR+MKDEEGF+YPHN+DFRGR
Sbjct: 554  PETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGR 613

Query: 1686 AYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFT 1507
            AYPMHP+LNHLGSD+CRG+LEFAEGR LGKSGLHWLKIHLANL+A GVDKLSHE R+AFT
Sbjct: 614  AYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFT 673

Query: 1506 ENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGS 1327
            ENHL+DIFDSAD+PLEGRRWWL AEDPFQCLAVCINL+EALRS SPET ISHIPVHQDGS
Sbjct: 674  ENHLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGS 733

Query: 1326 CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALRA 1147
            CNGLQHYAALGRD LGAAAVNLVA EKPADVYSGIAARVL I++RDAQ+DP VFPDALRA
Sbjct: 734  CNGLQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARVLVIIQRDAQRDPAVFPDALRA 793

Query: 1146 RVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTL 967
            ++L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGA  +++ELFGA+CYAAKVTL
Sbjct: 794  KLLLSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAPMEEAELFGASCYAAKVTL 853

Query: 966  TALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQVL 787
            TALGEMF+AAR IMSWLGECAK+IASENQPVRW TPLGLPVVQPYR++GRH +KTSLQ+L
Sbjct: 854  TALGEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKLGRHTVKTSLQIL 913

Query: 786  TLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDVD 607
            TLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV+CRKAGL FAGVHDSYWTHACDVD
Sbjct: 914  TLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLTFAGVHDSYWTHACDVD 973

Query: 606  EMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            EMNRILREKFVELYE PI ENL ++FQK+FP L FP LPERGDFDL++VL S YFFN
Sbjct: 974  EMNRILREKFVELYEMPIFENLLDSFQKSFPKLVFPPLPERGDFDLREVLGSPYFFN 1030


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score = 1444 bits (3737), Expect = 0.0
 Identities = 710/896 (79%), Positives = 785/896 (87%), Gaps = 1/896 (0%)
 Frame = -1

Query: 3120 AVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNLKR 2941
            A AV STDVEED S+V  +E+QELL EMKKE   Q S       R   GMG  KY  LK 
Sbjct: 136  AEAVSSTDVEEDVSIV--EEIQELLQEMKKE---QQSGGGRNRRRVARGMGSGKYRMLKM 190

Query: 2940 RQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELCRL 2761
            RQVKIETEAWE+AANEY+ELL DMC+ KLAPNLPYMKSLFLGWFEPL   IA+EQE CR+
Sbjct: 191  RQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRM 250

Query: 2760 GKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIRIH 2581
             K K AYA YF QLPADMM+VITMHKLMGLLMTGGEHG ARVV AAC+IGDAIEQE+RIH
Sbjct: 251  AKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIH 310

Query: 2580 KFLEKTKRKKVNIDKK-MEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDDSK 2404
            KFLEKTK+K    +K+  EG+ + +V  EQEKLR+ VT+L+KKQKL  V++IVKGQDD K
Sbjct: 311  KFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFK 370

Query: 2403 PWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASRRY 2224
            PW  + +AKVGS +IELL QTAYIQSPADQL D PPDI PAF H  RTV+KE K  S++Y
Sbjct: 371  PWGQDARAKVGSRVIELLTQTAYIQSPADQLADAPPDIFPAFTHALRTVSKETKGGSKKY 430

Query: 2223 GIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQRE 2044
            G+I+C+PLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKG H FLPSYVMRTHGA+QQR+
Sbjct: 431  GVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRD 490

Query: 2043 AVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPEEP 1864
             VKR P  QL PV+EALDTLG+TKWRVN RVLSV+DRIW+ GGRL DLVDRND+PLPE+P
Sbjct: 491  TVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKP 550

Query: 1863 ETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRGRA 1684
            ETED+A LR          KEN ERHSQRCDIELKL+VAR+MKDEEGF+YPHN+DFRGRA
Sbjct: 551  ETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRA 610

Query: 1683 YPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFTE 1504
            YPMHP+LNHLGSD+CRG+LEFAEGR LGKSGLHWLKIHLANL+A GVDKLSHE R+AFTE
Sbjct: 611  YPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTE 670

Query: 1503 NHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGSC 1324
            NHL+DIFDSAD+PLEGRRWWL AEDPFQCLAVCINL+EALRS SPET ISHIPVHQDGSC
Sbjct: 671  NHLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGSC 730

Query: 1323 NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALRAR 1144
            NGLQHYAALGRD LGAAAVNLVA EKPADVYSGIAARVL I++RDAQ+DP VFPDALRA+
Sbjct: 731  NGLQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARVLVIIQRDAQRDPAVFPDALRAK 790

Query: 1143 VLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLT 964
            +L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGA  +++ELFGA+CYAAKVTLT
Sbjct: 791  LLLSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAPMEEAELFGASCYAAKVTLT 850

Query: 963  ALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQVLT 784
            ALGEMF+AAR IMSWLGECAK+IASENQPVRW TPLGLPVVQPYR++GRH +KTSLQ+LT
Sbjct: 851  ALGEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKLGRHTVKTSLQILT 910

Query: 783  LQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDVDE 604
            LQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV+CRKAGL FAGVHDSYWTHACDVDE
Sbjct: 911  LQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLTFAGVHDSYWTHACDVDE 970

Query: 603  MNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            MNRILREKFVELYE PILENL ++FQK+FP L FP LPERGDFDL++VL S YFFN
Sbjct: 971  MNRILREKFVELYEMPILENLLDSFQKSFPKLVFPPLPERGDFDLREVLGSPYFFN 1026


>ref|XP_012088094.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Jatropha curcas]
          Length = 1007

 Score = 1441 bits (3731), Expect = 0.0
 Identities = 704/897 (78%), Positives = 794/897 (88%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNL 2947
            AEA++  STDV+ED SVV  +EVQELL EM+KE+ R+   R     R   GM   KY  L
Sbjct: 118  AEALS-SSTDVDEDVSVV--EEVQELLHEMRKEEGREKEHR----RRKELGMASWKYQRL 170

Query: 2946 KRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 2767
            ++RQVKIETEAWEQAA EYKELL DMCK KLAPNLPYMK+LFLGWFEPL   I++EQEL 
Sbjct: 171  RKRQVKIETEAWEQAAKEYKELLMDMCKQKLAPNLPYMKTLFLGWFEPLKDAISKEQELI 230

Query: 2766 RLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIR 2587
            R GK +AAYA YF QLPADMM+VITMHKLM L+MTGGEHG ARVV AA  +GDAI+QE+R
Sbjct: 231  REGKCRAAYAPYFDQLPADMMAVITMHKLMALVMTGGEHGCARVVAAALTVGDAIDQEVR 290

Query: 2586 IHKFLEKTKRKKVNIDKKMEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDDS 2407
            IHKFLEKTK+KK    +K + E +  + +EQEKLR+ VT+L++KQKL  V+QIVKGQDDS
Sbjct: 291  IHKFLEKTKKKKTRNSEKNQEEESNDMVKEQEKLRKKVTDLIRKQKLPAVRQIVKGQDDS 350

Query: 2406 KPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASRR 2227
            KPWS + KAKVGS +IELL++TAYIQ PADQ  D PPDIRPAFVHTFRTVT+  +  SRR
Sbjct: 351  KPWSQDAKAKVGSRVIELLIRTAYIQPPADQRADGPPDIRPAFVHTFRTVTQGERKGSRR 410

Query: 2226 YGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQR 2047
            YG+IQCDPLVLKGLER+ARHMVIPYMPMLVPPVKWTGYDKG HLFLPSYVMRTHG RQQR
Sbjct: 411  YGVIQCDPLVLKGLERSARHMVIPYMPMLVPPVKWTGYDKGAHLFLPSYVMRTHGVRQQR 470

Query: 2046 EAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPEE 1867
            EAV++    QL+PV+EALDTLG TKWR+NKR+L+V+DRIW SGGRL DLVDRND+PLPEE
Sbjct: 471  EAVRQTSKEQLQPVFEALDTLGRTKWRINKRILAVIDRIWNSGGRLADLVDRNDVPLPEE 530

Query: 1866 PETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRGR 1687
            P+TE++A+L+          KEN ERHSQRCD ELKLAVAR+MKDEEGF+YPHNLDFRGR
Sbjct: 531  PDTENEALLKKWKWRVKAVKKENKERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGR 590

Query: 1686 AYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFT 1507
            AYPMHP+LNHLGSD+CRG+LEFAEGRPLG SGL WLKIHLANLFA GVDK S++ RIAFT
Sbjct: 591  AYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLFAGGVDKFSYDGRIAFT 650

Query: 1506 ENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGS 1327
            ENHL+DIFDSADRPLEG+RWWL+AEDPFQCLAVC++L+EALRS SPET ISHIP+HQDGS
Sbjct: 651  ENHLDDIFDSADRPLEGKRWWLHAEDPFQCLAVCMDLTEALRSSSPETFISHIPIHQDGS 710

Query: 1326 CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALRA 1147
            CNGLQHYAALGRDK GAAAVNLV GEKPADVYSGIA+RVL+IM+RDA+KDP VFPDALRA
Sbjct: 711  CNGLQHYAALGRDKSGAAAVNLVTGEKPADVYSGIASRVLNIMRRDAEKDPVVFPDALRA 770

Query: 1146 RVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTL 967
            + L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG IAD+SE+FGA+CYAAKVTL
Sbjct: 771  KTLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADESEIFGASCYAAKVTL 830

Query: 966  TALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQVL 787
            TALGEMFEAARSIMSWLGECAKVIASEN+PVRW TPLGLPVVQPYR++GRHLIKTSLQVL
Sbjct: 831  TALGEMFEAARSIMSWLGECAKVIASENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL 890

Query: 786  TLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDVD 607
            TLQ+ETEK+M+KRQRTAFPPNFVHSLDGSHMMMTAV+C++AGL FAGVHDSYWTHACDVD
Sbjct: 891  TLQQETEKIMIKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLTFAGVHDSYWTHACDVD 950

Query: 606  EMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            EMNRILR+KFVELYE PILENL E+FQ++FP+L FP LPERGDFDL+DVL+S YFFN
Sbjct: 951  EMNRILRQKFVELYEIPILENLLESFQESFPTLPFPPLPERGDFDLRDVLESPYFFN 1007


>gb|KDP24319.1| hypothetical protein JCGZ_25615 [Jatropha curcas]
          Length = 908

 Score = 1441 bits (3731), Expect = 0.0
 Identities = 704/897 (78%), Positives = 794/897 (88%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNL 2947
            AEA++  STDV+ED SVV  +EVQELL EM+KE+ R+   R     R   GM   KY  L
Sbjct: 19   AEALS-SSTDVDEDVSVV--EEVQELLHEMRKEEGREKEHR----RRKELGMASWKYQRL 71

Query: 2946 KRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 2767
            ++RQVKIETEAWEQAA EYKELL DMCK KLAPNLPYMK+LFLGWFEPL   I++EQEL 
Sbjct: 72   RKRQVKIETEAWEQAAKEYKELLMDMCKQKLAPNLPYMKTLFLGWFEPLKDAISKEQELI 131

Query: 2766 RLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGSARVVPAACLIGDAIEQEIR 2587
            R GK +AAYA YF QLPADMM+VITMHKLM L+MTGGEHG ARVV AA  +GDAI+QE+R
Sbjct: 132  REGKCRAAYAPYFDQLPADMMAVITMHKLMALVMTGGEHGCARVVAAALTVGDAIDQEVR 191

Query: 2586 IHKFLEKTKRKKVNIDKKMEGEMTTSVNQEQEKLRRTVTNLMKKQKLRVVQQIVKGQDDS 2407
            IHKFLEKTK+KK    +K + E +  + +EQEKLR+ VT+L++KQKL  V+QIVKGQDDS
Sbjct: 192  IHKFLEKTKKKKTRNSEKNQEEESNDMVKEQEKLRKKVTDLIRKQKLPAVRQIVKGQDDS 251

Query: 2406 KPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEPKSASRR 2227
            KPWS + KAKVGS +IELL++TAYIQ PADQ  D PPDIRPAFVHTFRTVT+  +  SRR
Sbjct: 252  KPWSQDAKAKVGSRVIELLIRTAYIQPPADQRADGPPDIRPAFVHTFRTVTQGERKGSRR 311

Query: 2226 YGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGARQQR 2047
            YG+IQCDPLVLKGLER+ARHMVIPYMPMLVPPVKWTGYDKG HLFLPSYVMRTHG RQQR
Sbjct: 312  YGVIQCDPLVLKGLERSARHMVIPYMPMLVPPVKWTGYDKGAHLFLPSYVMRTHGVRQQR 371

Query: 2046 EAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRNDIPLPEE 1867
            EAV++    QL+PV+EALDTLG TKWR+NKR+L+V+DRIW SGGRL DLVDRND+PLPEE
Sbjct: 372  EAVRQTSKEQLQPVFEALDTLGRTKWRINKRILAVIDRIWNSGGRLADLVDRNDVPLPEE 431

Query: 1866 PETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHNLDFRGR 1687
            P+TE++A+L+          KEN ERHSQRCD ELKLAVAR+MKDEEGF+YPHNLDFRGR
Sbjct: 432  PDTENEALLKKWKWRVKAVKKENKERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGR 491

Query: 1686 AYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEARIAFT 1507
            AYPMHP+LNHLGSD+CRG+LEFAEGRPLG SGL WLKIHLANLFA GVDK S++ RIAFT
Sbjct: 492  AYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLFAGGVDKFSYDGRIAFT 551

Query: 1506 ENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVHQDGS 1327
            ENHL+DIFDSADRPLEG+RWWL+AEDPFQCLAVC++L+EALRS SPET ISHIP+HQDGS
Sbjct: 552  ENHLDDIFDSADRPLEGKRWWLHAEDPFQCLAVCMDLTEALRSSSPETFISHIPIHQDGS 611

Query: 1326 CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVFPDALRA 1147
            CNGLQHYAALGRDK GAAAVNLV GEKPADVYSGIA+RVL+IM+RDA+KDP VFPDALRA
Sbjct: 612  CNGLQHYAALGRDKSGAAAVNLVTGEKPADVYSGIASRVLNIMRRDAEKDPVVFPDALRA 671

Query: 1146 RVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTL 967
            + L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG IAD+SE+FGA+CYAAKVTL
Sbjct: 672  KTLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADESEIFGASCYAAKVTL 731

Query: 966  TALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIKTSLQVL 787
            TALGEMFEAARSIMSWLGECAKVIASEN+PVRW TPLGLPVVQPYR++GRHLIKTSLQVL
Sbjct: 732  TALGEMFEAARSIMSWLGECAKVIASENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL 791

Query: 786  TLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWTHACDVD 607
            TLQ+ETEK+M+KRQRTAFPPNFVHSLDGSHMMMTAV+C++AGL FAGVHDSYWTHACDVD
Sbjct: 792  TLQQETEKIMIKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLTFAGVHDSYWTHACDVD 851

Query: 606  EMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTYFFN 436
            EMNRILR+KFVELYE PILENL E+FQ++FP+L FP LPERGDFDL+DVL+S YFFN
Sbjct: 852  EMNRILRQKFVELYEIPILENLLESFQESFPTLPFPPLPERGDFDLRDVLESPYFFN 908


>ref|XP_010029435.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Eucalyptus grandis]
          Length = 1027

 Score = 1441 bits (3730), Expect = 0.0
 Identities = 706/903 (78%), Positives = 790/903 (87%), Gaps = 6/903 (0%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNL 2947
            AEA    STDVEE+ SV   +EV+ELL EM K +R++  +   + +    GMG  KYH L
Sbjct: 125  AEAEVASSTDVEEEVSVAEEEEVKELLEEMTKAERKEKVYWNRQRNLAARGMGSTKYHRL 184

Query: 2946 KRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 2767
            +RRQVK E EAW++AANEYKELLNDMC+HKLAPNLPYMKSLFLGWFEPL + IA EQE  
Sbjct: 185  RRRQVKAECEAWQRAANEYKELLNDMCEHKLAPNLPYMKSLFLGWFEPLRNTIAAEQESY 244

Query: 2766 RLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGS--ARVVPAACLIGDAIEQE 2593
            R GK K AY ++F +LPADMM+VITMHKLM L+MTGGEHG   ARV+ AAC IGDA+EQE
Sbjct: 245  RSGKRKTAYGRFFDRLPADMMAVITMHKLMALMMTGGEHGHGHARVIQAACTIGDAVEQE 304

Query: 2592 IRIHKFLEKTKRKKVNIDKKMEGEMTTSVNQEQEKL----RRTVTNLMKKQKLRVVQQIV 2425
            ++I  FLEKTK+KKV    +  G+ T + +QEQEKL    R  VT+L+KK+KL  VQ++V
Sbjct: 305  VKIQSFLEKTKKKKVKEGDEDRGDETKAASQEQEKLQEKLRHKVTDLLKKRKLPAVQKLV 364

Query: 2424 KGQDDSKPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEP 2245
            KGQDD KPW  E KAKVGS LIELL+QTAYIQ PA+QL + PP+IRPAF+HTFRTVT++ 
Sbjct: 365  KGQDDLKPWGQEAKAKVGSRLIELLIQTAYIQPPANQLAEDPPEIRPAFLHTFRTVTRDT 424

Query: 2244 KSASRRYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTH 2065
            KS+SRRYG+IQCDPL+LKGLERTARHMVIPYMPMLVPPVKWTGYDKG ++FLPS VMRTH
Sbjct: 425  KSSSRRYGLIQCDPLILKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYMFLPSSVMRTH 484

Query: 2064 GARQQREAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRND 1885
            G RQQREAVKRAP+ QL+ V+EALD LG+TKWRVNKRVLSVVDRIW SGGRL DLVDRND
Sbjct: 485  GVRQQREAVKRAPLQQLQTVFEALDILGATKWRVNKRVLSVVDRIWNSGGRLADLVDRND 544

Query: 1884 IPLPEEPETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHN 1705
            I LPE+P+TED+A +R          KEN ERHSQRCDIELKLAVAR+MK+EEGF+YPHN
Sbjct: 545  IALPEKPDTEDEAQIRKWKWKVKSTRKENRERHSQRCDIELKLAVARKMKEEEGFYYPHN 604

Query: 1704 LDFRGRAYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHE 1525
            LDFRGRAYPMHP+LNHLGSD+CRG+LEFAE RPLGKSGL WLKIHLANL+A GVDKLSHE
Sbjct: 605  LDFRGRAYPMHPYLNHLGSDLCRGILEFAESRPLGKSGLRWLKIHLANLYAGGVDKLSHE 664

Query: 1524 ARIAFTENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIP 1345
             R+AFTENHL+DIFDSADRPLEG+RWWLNAEDPFQCLAVCINL+EALRS SPET  S+IP
Sbjct: 665  GRLAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCINLTEALRSSSPETFRSNIP 724

Query: 1344 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVF 1165
            VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL+IM+ DA+KDP VF
Sbjct: 725  VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLEIMQMDAKKDPAVF 784

Query: 1164 PDALRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACY 985
             DAL AR L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI DD+ELF A+CY
Sbjct: 785  RDALHARTLIHQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIMDDTELFRASCY 844

Query: 984  AAKVTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIK 805
            AAK TLTALGEMFEAARSIMSWLG+CAK+IASENQPVRW TPLGLPVVQPYR++GRHL+K
Sbjct: 845  AAKTTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRRVGRHLVK 904

Query: 804  TSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWT 625
            TSLQ+LTLQRET+KV+ KRQRTAFPPNFVHSLDGSHMMMTAV+C+ AGLNFAGVHDSYWT
Sbjct: 905  TSLQILTLQRETDKVLTKRQRTAFPPNFVHSLDGSHMMMTAVACKTAGLNFAGVHDSYWT 964

Query: 624  HACDVDEMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTY 445
            HACDVDEMNRILREKFVELYETPILENL E+FQ +FPSLSFP LPERGDFDLKDVLDS Y
Sbjct: 965  HACDVDEMNRILREKFVELYETPILENLLESFQNSFPSLSFPPLPERGDFDLKDVLDSAY 1024

Query: 444  FFN 436
            FFN
Sbjct: 1025 FFN 1027


>gb|KCW56347.1| hypothetical protein EUGRSUZ_I02081 [Eucalyptus grandis]
          Length = 989

 Score = 1441 bits (3730), Expect = 0.0
 Identities = 706/903 (78%), Positives = 790/903 (87%), Gaps = 6/903 (0%)
 Frame = -1

Query: 3126 AEAVAVPSTDVEEDTSVVAADEVQELLSEMKKEDRRQVSFRWPKHHRTVHGMGRKKYHNL 2947
            AEA    STDVEE+ SV   +EV+ELL EM K +R++  +   + +    GMG  KYH L
Sbjct: 87   AEAEVASSTDVEEEVSVAEEEEVKELLEEMTKAERKEKVYWNRQRNLAARGMGSTKYHRL 146

Query: 2946 KRRQVKIETEAWEQAANEYKELLNDMCKHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 2767
            +RRQVK E EAW++AANEYKELLNDMC+HKLAPNLPYMKSLFLGWFEPL + IA EQE  
Sbjct: 147  RRRQVKAECEAWQRAANEYKELLNDMCEHKLAPNLPYMKSLFLGWFEPLRNTIAAEQESY 206

Query: 2766 RLGKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEHGS--ARVVPAACLIGDAIEQE 2593
            R GK K AY ++F +LPADMM+VITMHKLM L+MTGGEHG   ARV+ AAC IGDA+EQE
Sbjct: 207  RSGKRKTAYGRFFDRLPADMMAVITMHKLMALMMTGGEHGHGHARVIQAACTIGDAVEQE 266

Query: 2592 IRIHKFLEKTKRKKVNIDKKMEGEMTTSVNQEQEKL----RRTVTNLMKKQKLRVVQQIV 2425
            ++I  FLEKTK+KKV    +  G+ T + +QEQEKL    R  VT+L+KK+KL  VQ++V
Sbjct: 267  VKIQSFLEKTKKKKVKEGDEDRGDETKAASQEQEKLQEKLRHKVTDLLKKRKLPAVQKLV 326

Query: 2424 KGQDDSKPWSTEVKAKVGSHLIELLLQTAYIQSPADQLTDCPPDIRPAFVHTFRTVTKEP 2245
            KGQDD KPW  E KAKVGS LIELL+QTAYIQ PA+QL + PP+IRPAF+HTFRTVT++ 
Sbjct: 327  KGQDDLKPWGQEAKAKVGSRLIELLIQTAYIQPPANQLAEDPPEIRPAFLHTFRTVTRDT 386

Query: 2244 KSASRRYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTH 2065
            KS+SRRYG+IQCDPL+LKGLERTARHMVIPYMPMLVPPVKWTGYDKG ++FLPS VMRTH
Sbjct: 387  KSSSRRYGLIQCDPLILKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYMFLPSSVMRTH 446

Query: 2064 GARQQREAVKRAPINQLRPVYEALDTLGSTKWRVNKRVLSVVDRIWASGGRLGDLVDRND 1885
            G RQQREAVKRAP+ QL+ V+EALD LG+TKWRVNKRVLSVVDRIW SGGRL DLVDRND
Sbjct: 447  GVRQQREAVKRAPLQQLQTVFEALDILGATKWRVNKRVLSVVDRIWNSGGRLADLVDRND 506

Query: 1884 IPLPEEPETEDQAILRXXXXXXXXXXKENSERHSQRCDIELKLAVARRMKDEEGFFYPHN 1705
            I LPE+P+TED+A +R          KEN ERHSQRCDIELKLAVAR+MK+EEGF+YPHN
Sbjct: 507  IALPEKPDTEDEAQIRKWKWKVKSTRKENRERHSQRCDIELKLAVARKMKEEEGFYYPHN 566

Query: 1704 LDFRGRAYPMHPHLNHLGSDICRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHE 1525
            LDFRGRAYPMHP+LNHLGSD+CRG+LEFAE RPLGKSGL WLKIHLANL+A GVDKLSHE
Sbjct: 567  LDFRGRAYPMHPYLNHLGSDLCRGILEFAESRPLGKSGLRWLKIHLANLYAGGVDKLSHE 626

Query: 1524 ARIAFTENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIP 1345
             R+AFTENHL+DIFDSADRPLEG+RWWLNAEDPFQCLAVCINL+EALRS SPET  S+IP
Sbjct: 627  GRLAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCINLTEALRSSSPETFRSNIP 686

Query: 1344 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPTVF 1165
            VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL+IM+ DA+KDP VF
Sbjct: 687  VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLEIMQMDAKKDPAVF 746

Query: 1164 PDALRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACY 985
             DAL AR L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI DD+ELF A+CY
Sbjct: 747  RDALHARTLIHQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIMDDTELFRASCY 806

Query: 984  AAKVTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWMTPLGLPVVQPYRQIGRHLIK 805
            AAK TLTALGEMFEAARSIMSWLG+CAK+IASENQPVRW TPLGLPVVQPYR++GRHL+K
Sbjct: 807  AAKTTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRRVGRHLVK 866

Query: 804  TSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVSCRKAGLNFAGVHDSYWT 625
            TSLQ+LTLQRET+KV+ KRQRTAFPPNFVHSLDGSHMMMTAV+C+ AGLNFAGVHDSYWT
Sbjct: 867  TSLQILTLQRETDKVLTKRQRTAFPPNFVHSLDGSHMMMTAVACKTAGLNFAGVHDSYWT 926

Query: 624  HACDVDEMNRILREKFVELYETPILENLSENFQKTFPSLSFPALPERGDFDLKDVLDSTY 445
            HACDVDEMNRILREKFVELYETPILENL E+FQ +FPSLSFP LPERGDFDLKDVLDS Y
Sbjct: 927  HACDVDEMNRILREKFVELYETPILENLLESFQNSFPSLSFPPLPERGDFDLKDVLDSAY 986

Query: 444  FFN 436
            FFN
Sbjct: 987  FFN 989