BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00006247
         (1526 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDO97209.1| unnamed protein product [Coffea canephora]            608   e-171
ref|XP_007042502.1| DNA-directed RNA polymerase family protein [...   531   e-148
ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, ...   528   e-147
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   526   e-146
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerases II, ...   526   e-146
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ...   525   e-146
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   524   e-146
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...   523   e-145
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, ...   523   e-145
gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -li...   522   e-145
ref|XP_009605052.1| PREDICTED: DNA-directed RNA polymerases II, ...   522   e-145
ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, ...   521   e-145
ref|XP_009785778.1| PREDICTED: DNA-directed RNA polymerases II, ...   521   e-145
ref|XP_011092547.1| PREDICTED: DNA-directed RNA polymerases II, ...   520   e-144
ref|XP_010518168.1| PREDICTED: DNA-directed RNA polymerases II, ...   520   e-144
ref|XP_010467299.1| PREDICTED: DNA-directed RNA polymerases II, ...   518   e-144
ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, ...   518   e-144
ref|XP_010488959.1| PREDICTED: DNA-directed RNA polymerases II, ...   517   e-143
gb|KFK40018.1| hypothetical protein AALP_AA3G319300 [Arabis alpina]   517   e-143
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerases II, ...   517   e-143

>emb|CDO97209.1| unnamed protein product [Coffea canephora]
          Length = 319

 Score =  608 bits (1569), Expect = e-171
 Identities = 308/319 (96%), Positives = 313/319 (98%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEGRSYQRFPTVKIRELK+DY KFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGRSYQRFPTVKIRELKNDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TSRELISSDPSVVPVDFASPS EYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSRELISSDPSVVPVDFASPSSEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEPEIYINEDMMEKLT EQRMSVVESSPTKVFDIDAKTGR+VVVDPEAY Y
Sbjct: 181  SPAATVTFMYEPEIYINEDMMEKLTLEQRMSVVESSPTKVFDIDAKTGRVVVVDPEAYTY 240

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEVIKKCESLN PGLVEVHPK+DSFIFTVES+GAIKASQLVLNAID+LKQKLDAVRLSE
Sbjct: 241  DDEVIKKCESLNAPGLVEVHPKEDSFIFTVESTGAIKASQLVLNAIDILKQKLDAVRLSE 300

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEADEQFLEL AHMRGG
Sbjct: 301  DTVEADEQFLELDAHMRGG 319


>ref|XP_007042502.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
            gi|508706437|gb|EOX98333.1| DNA-directed RNA polymerase
            family protein [Theobroma cacao]
          Length = 318

 Score =  531 bits (1367), Expect = e-148
 Identities = 269/319 (84%), Positives = 293/319 (91%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP VKIRELK DY KFELRDTDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC+ DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++L SSD +VVPVDF   S  YD++E RGI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHTVVPVDFTD-SAGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEPEI+INEDMME LT E++ S VESSPT+VFDID  T ++VVVDPEAY Y
Sbjct: 180  SPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYTY 239

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEV+KK E++  PGLVE++ K+DSFIFTVES+GAIKASQLVLNAI+VLKQKLDAVRLSE
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSE 299

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Gossypium raimondii] gi|728821384|gb|KHG04309.1|
            DNA-directed RNA polymerase II subunit RPB3-A -like
            protein [Gossypium arboreum] gi|763780305|gb|KJB47376.1|
            hypothetical protein B456_008G023500 [Gossypium
            raimondii]
          Length = 318

 Score =  528 bits (1361), Expect = e-147
 Identities = 266/319 (83%), Positives = 294/319 (92%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP VKIRELK DY KFELRDTDAS+ANALRRVMI+EVPTIAIDLVEIEVNSS
Sbjct: 1    MEGISYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC++DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++L SSD +VVPVDF   +  YD+ E RGI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHTVVPVDFTD-NAGYDSTEPRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEPEI+INED+ME LT E+++S VESSPTKVFDID  T ++VVVDPEAY Y
Sbjct: 180  SPAATVTFMYEPEIHINEDLMESLTLEEKLSFVESSPTKVFDIDPNTQQVVVVDPEAYTY 239

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEV+KK E++  PGLVE++ K+DSFIFTVES+GAIKASQLVLNAI++LKQKLDAVRLSE
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSE 299

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 318

 Score =  526 bits (1354), Expect = e-146
 Identities = 265/319 (83%), Positives = 292/319 (91%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP +KIRELK DY KFELRDTDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1    MEGASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC+YCSVEFHLRAKC+ DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++L SSD +VVPVDF S S  YD++E RGI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHTVVPVDF-SDSSGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEP+I+INED+ME L+ E++ S VESSPTKVFDID  T ++VVVDPEAY Y
Sbjct: 180  SPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYTY 239

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            D+EVIKK ES+  PGLV +  K+DSFIFTVES+GAIKASQLVLNAI++LKQKLDAVRLSE
Sbjct: 240  DEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSE 299

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Solanum lycopersicum]
          Length = 319

 Score =  526 bits (1354), Expect = e-146
 Identities = 256/319 (80%), Positives = 294/319 (92%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP +K+RE+K D++KFELRDTDASIANALRR+MIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKVREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFI+HRLGL+PLTSERAMSMRFSRDCDACDGDGQCEYCSVEF+LR KCL+DQTLDV
Sbjct: 61   VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++L+SSD +VVPVD++  S  +DN  N+GI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSKDLLSSDHTVVPVDYSDASSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEPEIYINEDMME LT E++  +VESSPTKVF ID +  +++VVDPEAY Y
Sbjct: 181  SPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTY 240

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEV+KK E++  PG+VE+H K+DSFIFTVE++GA+KASQLVLNAI+VLKQKLDAVRLS+
Sbjct: 241  DDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 300

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 301  DTVEADDQFGELGAHMRGG 319


>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Solanum tuberosum]
          Length = 319

 Score =  525 bits (1351), Expect = e-146
 Identities = 256/319 (80%), Positives = 294/319 (92%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP +KIRE+K D++KFELR+TDASIANALRR+MIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFI+HRLGL+PLTSERAMSMRFSRDCDACDGDGQCEYCSVEF+LR KCL+DQTLDV
Sbjct: 61   VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++L+SSD +VVPVD++  S  +DN  N+GI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSKDLLSSDHTVVPVDYSDTSSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEPEIYINEDMME LT E++  +VESSPTKVF ID +  +++VVDPEAY Y
Sbjct: 181  SPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTY 240

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEV+KK E++  PG+VE+H K+DSFIFTVE++GA+KASQLVLNAI+VLKQKLDAVRLS+
Sbjct: 241  DDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 300

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 301  DTVEADDQFGELGAHMRGG 319


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  524 bits (1350), Expect = e-146
 Identities = 264/319 (82%), Positives = 294/319 (92%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP +KIRE+K DY KFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++LISSD +VVPVDF S S  YD+A+ +GI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSKDLISSDHTVVPVDF-SDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEPEI+INED+ME LT E++ S VESSPTKVFDIDA + ++VV D EAY Y
Sbjct: 180  SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTY 239

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEV+KK E++  PGLVE++ K+DSFIFTVES+GAIKASQLVLNAIDVLKQKLDAVRLSE
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSE 299

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
            gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
            RNA polymerases II, IV and V subunit 3-like [Citrus
            sinensis] gi|557524889|gb|ESR36195.1| hypothetical
            protein CICLE_v10028849mg [Citrus clementina]
            gi|641840877|gb|KDO59794.1| hypothetical protein
            CISIN_1g020936mg [Citrus sinensis]
            gi|641840878|gb|KDO59795.1| hypothetical protein
            CISIN_1g020936mg [Citrus sinensis]
          Length = 319

 Score =  523 bits (1347), Expect = e-145
 Identities = 265/319 (83%), Positives = 289/319 (90%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            M+G SYQRFP VKIRELK DY KFELRDTDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC +DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++L SSD SVVPVDF  P+      + RGI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEPEI+INED+ME L+ E++ S VESSPTKVFDID  TG++ VVD EAY Y
Sbjct: 181  SPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTY 240

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEVIKK E++  PGLVE++ K+DSFIFTVES+GAIKASQLVLNAI+VLKQKLDAVRLSE
Sbjct: 241  DDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSE 300

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 301  DTVEADDQFGELGAHMRGG 319


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Vitis
            vinifera] gi|731383801|ref|XP_010647901.1| PREDICTED:
            DNA-directed RNA polymerases II, IV and V subunit 3
            [Vitis vinifera]
          Length = 318

 Score =  523 bits (1347), Expect = e-145
 Identities = 263/319 (82%), Positives = 294/319 (92%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP +KIRE+K DY KFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++LISSD +VVPVDF S S  YD+A+ +GI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSKDLISSDHTVVPVDF-SDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEPEI+INED+ME LT E++ S VESSPTKVFDIDA + ++VV D EAY Y
Sbjct: 180  SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTY 239

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEV+KK E++  PGLVE++ K+DSFIFTVES+GAIKASQLVLNAIDVLKQKLDAVRLSE
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSE 299

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -like protein
            [Gossypium arboreum]
          Length = 318

 Score =  522 bits (1344), Expect = e-145
 Identities = 260/319 (81%), Positives = 293/319 (91%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP VKIRELK DY KFEL DTDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGASYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC++DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++L SSD +VVPVDF   +  Y+++E RGI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHTVVPVDFTDYA-GYESSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEPEI+INEDMM+ LT E++ S V+SSPT+VFDID  T ++VVVDPEAY Y
Sbjct: 180  SPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPEAYTY 239

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEV+KK E++  PGLVE++ K+DSFIFT+ES+GA+KASQLVLNAI++LKQKLDAVRLSE
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKASQLVLNAIEILKQKLDAVRLSE 299

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_009605052.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Nicotiana tomentosiformis]
          Length = 318

 Score =  522 bits (1344), Expect = e-145
 Identities = 257/319 (80%), Positives = 294/319 (92%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP +KIRE+K DY+KFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPRIKIREVKDDYMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFI+HRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEF+LR KCL+DQTLDV
Sbjct: 61   VLNDEFISHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++L+SSD +VVPVD++  S  +DN+ N+GI+IVKLRRGQELRLRAIARKGI KDHAKW
Sbjct: 121  TSKDLLSSDHTVVPVDYSDASSGFDNSTNKGIIIVKLRRGQELRLRAIARKGIAKDHAKW 180

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEP+IYINEDMME LT  ++  +V+SSPTKVF ID +  +++VVDPEAY Y
Sbjct: 181  SPAATVTFMYEPDIYINEDMMETLTLNEKRELVDSSPTKVFGIDPE-NKVIVVDPEAYTY 239

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEV+KKCE++  PGL+E+H K+DSFIFTVE++GA+KASQLVLNAI+VLKQKLDAVRLS+
Sbjct: 240  DDEVLKKCEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 299

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Gossypium raimondii] gi|763810754|gb|KJB77656.1|
            hypothetical protein B456_012G149200 [Gossypium
            raimondii]
          Length = 318

 Score =  521 bits (1343), Expect = e-145
 Identities = 260/319 (81%), Positives = 292/319 (91%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP VKIRELK DY KFEL DTDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGASYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC++DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++L SSD +VVPVDF   S  Y+++E RGI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHTVVPVDFTD-SAGYESSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEPEI+INEDMM+ LT E++ S V+SSPT+VFDID  T ++VVVDPEAY Y
Sbjct: 180  SPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPEAYTY 239

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEV+KK E++  PGLVE++ K+DSFIFT+ES+GA+KA QLVLNAI++LKQKLDAVRLSE
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKAFQLVLNAIEILKQKLDAVRLSE 299

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_009785778.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Nicotiana sylvestris]
          Length = 318

 Score =  521 bits (1341), Expect = e-145
 Identities = 257/319 (80%), Positives = 294/319 (92%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP +KIRE+K DY+KFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPRIKIREVKDDYMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFI+HRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEF+LR KCL+DQTLDV
Sbjct: 61   VLNDEFISHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++L+SSD +VVPVD++  S  +DN+ N+GI+IVKLRRGQELRLRAIARKGI KDHAKW
Sbjct: 121  TSKDLLSSDHTVVPVDYSDASSGFDNSTNKGIIIVKLRRGQELRLRAIARKGIAKDHAKW 180

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEP+IYINEDMME LT E++  +V+SSPTKVF ID +  +++VVD EAY Y
Sbjct: 181  SPAATVTFMYEPDIYINEDMMETLTLEEKRELVDSSPTKVFGIDPE-NKVIVVDAEAYTY 239

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEV+KKCE++  PGL+E+H K+DSFIFTVE++GA+KASQLVLNAI+VLKQKLDAVRLS+
Sbjct: 240  DDEVLKKCEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 299

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_011092547.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Sesamum indicum]
          Length = 319

 Score =  520 bits (1340), Expect = e-144
 Identities = 261/319 (81%), Positives = 287/319 (89%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG SYQRFP +KIR ++ D++KFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1    MEGVSYQRFPKIKIRTVRDDFMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKC+NDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS++L SSD +VVPVDF+  S  +DN ENRGI+IVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHTVVPVDFSDSSTGFDNTENRGIIIVKLRRGQELVLRAIARKGIGKDHAKW 180

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEPEIYINE+MME LT E++   V+SSPTKVFDI+  T ++ V D EAY Y
Sbjct: 181  SPAATVTFMYEPEIYINEEMMEGLTLEEKKEFVDSSPTKVFDINPNTHQVYVHDAEAYTY 240

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEV+KK E++  PGLVE+H K+DSFIFTVE++G IKASQL LNAIDVLKQKLDAVRLS 
Sbjct: 241  DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKASQLFLNAIDVLKQKLDAVRLSS 300

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEADEQF ELGAHMRGG
Sbjct: 301  DTVEADEQFGELGAHMRGG 319


>ref|XP_010518168.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Camelina sativa]
          Length = 319

 Score =  520 bits (1338), Expect = e-144
 Identities = 254/319 (79%), Positives = 289/319 (90%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            M+G +YQRFP VKIRELK DY KFELR+TD S+ANALRRVMI+EVPT+AIDLVEIEVNSS
Sbjct: 1    MDGATYQRFPKVKIRELKDDYAKFELRETDVSVANALRRVMISEVPTVAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEF L AKC+ DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TSR+L S+DP+V PVDF   S   D++E +GI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSRDLYSADPTVTPVDFTVDSAVSDSSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEP+I INEDMM+ LT E+++ ++ESSPTKVF ID  T ++VVVDPEAY Y
Sbjct: 181  SPAATVTFMYEPDIIINEDMMDTLTEEEKIDLIESSPTKVFGIDPVTRQVVVVDPEAYTY 240

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            D+EVIKK E++  PGL+E+HPKDDSF+FTVES+GA+KASQLVLNAID+LKQKLDAVRLS+
Sbjct: 241  DEEVIKKAEAMGKPGLIEIHPKDDSFVFTVESTGAVKASQLVLNAIDILKQKLDAVRLSD 300

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 301  DTVEADDQFGELGAHMRGG 319


>ref|XP_010467299.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Camelina sativa]
          Length = 319

 Score =  518 bits (1334), Expect = e-144
 Identities = 253/319 (79%), Positives = 290/319 (90%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            M+G +YQRFP VKIRELK DY KFELR+TD S+ANALRRVMI+EVPT+AIDLVEIEVNSS
Sbjct: 1    MDGATYQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEF L AKC+ DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TSR+L S+DP+V PVDF   S   D++E++GI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSRDLYSADPTVTPVDFTVDSTISDSSESKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEP+I INEDMM+ LT E+++ ++ESSPTKVF ID  T ++VVVDPEAY Y
Sbjct: 181  SPAATVTFMYEPDIIINEDMMDTLTEEEKIDLIESSPTKVFGIDPVTRQVVVVDPEAYTY 240

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            D+EVIKK E++  PG++E+HPKDDSF+FTVES+GA+KASQLVLNAID+LKQKLDAVRLS+
Sbjct: 241  DEEVIKKAEAMGKPGIIEIHPKDDSFVFTVESTGAVKASQLVLNAIDILKQKLDAVRLSD 300

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 301  DTVEADDQFGELGAHMRGG 319


>ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Eucalyptus grandis] gi|629097957|gb|KCW63722.1|
            hypothetical protein EUGRSUZ_G01370 [Eucalyptus grandis]
          Length = 321

 Score =  518 bits (1334), Expect = e-144
 Identities = 261/317 (82%), Positives = 291/317 (91%)
 Frame = -1

Query: 1337 GRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSSVL 1158
            G SYQRFP VK+RE K DY+KFELR TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSSVL
Sbjct: 6    GASYQRFPVVKVRETKDDYLKFELRGTDASVANALRRVMIAEVPTIAIDLVEIEVNSSVL 65

Query: 1157 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDVTS 978
            NDEFIAHRLGL+PLTS+RAMSMRFSRDCDACDGDGQCE+CSVEFHLRAKC+ DQTLDVTS
Sbjct: 66   NDEFIAHRLGLVPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDVTS 125

Query: 977  RELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKWSP 798
            ++LISSD +VVPVDF S +L  D+AE +GI IVKLRRGQELRLRAIARKGIGKDHAKWSP
Sbjct: 126  KDLISSDHTVVPVDF-SDALADDSAEQKGITIVKLRRGQELRLRAIARKGIGKDHAKWSP 184

Query: 797  AATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIYDD 618
            AATVTFMYEPEI+INED++E L+ E++ S VESSPTKVFDID  T +++VVDPEAY YD+
Sbjct: 185  AATVTFMYEPEIHINEDLVETLSLEEKQSWVESSPTKVFDIDPNTEQVLVVDPEAYTYDE 244

Query: 617  EVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSEDT 438
            EVIKK E++  PGLVE++ K+DSFIFTVES+GAIKASQLVLNAIDVLKQKLDAVRLSEDT
Sbjct: 245  EVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDT 304

Query: 437  VEADEQFLELGAHMRGG 387
            VEAD+QF ELGAHMRGG
Sbjct: 305  VEADDQFGELGAHMRGG 321


>ref|XP_010488959.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Camelina sativa]
          Length = 319

 Score =  517 bits (1331), Expect = e-143
 Identities = 253/319 (79%), Positives = 289/319 (90%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            M+G +YQRFP VKIRELK DY KFELR+TD S+ANALRRVMI+EVPT+AIDLVEIEVNSS
Sbjct: 1    MDGATYQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEF L AKC+ DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TSR+L S+DP+V PVDF   S   D++E++GI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSRDLYSADPTVTPVDFTVDSAVSDSSESKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEP+I INEDMM+ LT E+++ ++ESSPTKV  ID  T ++VVVDPEAY Y
Sbjct: 181  SPAATVTFMYEPDIIINEDMMDTLTEEEKIDLIESSPTKVLGIDPVTRQVVVVDPEAYTY 240

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            D+EVIKK E++  PGL+E+HPKDDSF+FTVES+GA+KASQLVLNAID+LKQKLDAVRLS+
Sbjct: 241  DEEVIKKAEAMGKPGLIEIHPKDDSFVFTVESTGAVKASQLVLNAIDILKQKLDAVRLSD 300

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 301  DTVEADDQFGELGAHMRGG 319


>gb|KFK40018.1| hypothetical protein AALP_AA3G319300 [Arabis alpina]
          Length = 320

 Score =  517 bits (1331), Expect = e-143
 Identities = 256/317 (80%), Positives = 286/317 (90%)
 Frame = -1

Query: 1337 GRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSSVL 1158
            G SYQRFP VKIRELK DY KFELRDTD S+ANALRRVMI+EVPT+AIDLVEIEVNSSVL
Sbjct: 4    GVSYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 63

Query: 1157 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDVTS 978
            NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE+CSVEF LRAKC+ DQTLDVTS
Sbjct: 64   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFQLRAKCVTDQTLDVTS 123

Query: 977  RELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKWSP 798
            R+L S+DP+V PVDF   S   D++E RGI+IVKLRRGQEL+LRAIARKGIGKDHAKWSP
Sbjct: 124  RDLYSADPTVTPVDFTIDSSASDSSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSP 183

Query: 797  AATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIYDD 618
            AATVTFMYEP+I INEDMM+ LT E+++ +VESSPTKVF  D  T ++VVVDPEAY YD+
Sbjct: 184  AATVTFMYEPDIIINEDMMDTLTDEEKIDLVESSPTKVFGFDPDTRQVVVVDPEAYTYDE 243

Query: 617  EVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSEDT 438
            EVIKK E++  PGL+E+ PKDDSFIFTVES+GA+KASQLVLNAID+LKQKLDAVRLS+DT
Sbjct: 244  EVIKKAEAMGKPGLIEIRPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAVRLSDDT 303

Query: 437  VEADEQFLELGAHMRGG 387
            VEAD+QF ELGAHMRGG
Sbjct: 304  VEADDQFGELGAHMRGG 320


>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Fragaria vesca subsp. vesca]
          Length = 318

 Score =  517 bits (1331), Expect = e-143
 Identities = 257/319 (80%), Positives = 294/319 (92%)
 Frame = -1

Query: 1343 MEGRSYQRFPTVKIRELKSDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 1164
            MEG+SYQRFP VKIRE++ DY+KFELRDTDAS+ANALRRVMIAEVPT+AIDLVEIE+NSS
Sbjct: 1    MEGKSYQRFPRVKIREMRHDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS 60

Query: 1163 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCLNDQTLDV 984
            VLNDEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEYCSVEFHLRA+C +DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRARCHSDQTLDV 120

Query: 983  TSRELISSDPSVVPVDFASPSLEYDNAENRGIMIVKLRRGQELRLRAIARKGIGKDHAKW 804
            TS+EL+SSD +VVPVDF+  S  Y+ +E RGI+IVKLRRGQELRLRAIARKGIGKDHAKW
Sbjct: 121  TSKELLSSDHTVVPVDFSDAS-GYEASEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 803  SPAATVTFMYEPEIYINEDMMEKLTPEQRMSVVESSPTKVFDIDAKTGRIVVVDPEAYIY 624
            SPAATVTFMYEP+I INE+MM+ L+ E + + V+SSPTKVF+ID  TG++VVVDPEAY Y
Sbjct: 180  SPAATVTFMYEPDIRINEEMMDTLSLEDKAAWVDSSPTKVFEIDPNTGKVVVVDPEAYTY 239

Query: 623  DDEVIKKCESLNVPGLVEVHPKDDSFIFTVESSGAIKASQLVLNAIDVLKQKLDAVRLSE 444
            DDEVIKK E++  PGLV++  K+DSFIFTVES+GAIKASQL+LNAI++LKQKLDAVRLSE
Sbjct: 240  DDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEILKQKLDAVRLSE 299

Query: 443  DTVEADEQFLELGAHMRGG 387
            DTVEAD+QF ELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318