BLASTX nr result

ID: Gardenia21_contig00005327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00005327
         (292 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP17754.1| unnamed protein product [Coffea canephora]             92   2e-16
ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    69   2e-09
ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    68   2e-09
ref|XP_011087584.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    59   1e-06

>emb|CDP17754.1| unnamed protein product [Coffea canephora]
          Length = 779

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 45/49 (91%), Positives = 45/49 (91%)
 Frame = -1

Query: 175 MACSSSIIGVSSIYQTTPSLELSKRLTSNPPLSLPFPAEKSHFYGLKVT 29
           MAC SSIIGVSSIYQTTPSLELSKR TS PPLS PFPAEKSHFYGLKVT
Sbjct: 1   MACPSSIIGVSSIYQTTPSLELSKRPTSTPPLSFPFPAEKSHFYGLKVT 49


>ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -1

Query: 175 MACSSSIIGVSSIYQTTPSLELSKRLTSNPPLSLPFPAEKSHFY 44
           MA SSSIIGVSSIYQT PSLELS+R T+ PPLSLPF  EKS+F+
Sbjct: 1   MASSSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSTEKSNFH 44


>ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Solanum lycopersicum]
          Length = 746

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -1

Query: 175 MACSSSIIGVSSIYQTTPSLELSKRLTSNPPLSLPFPAEKSHFY 44
           MA SSSIIGVSSIYQT PSLELS+R T+ PPLSLPF  EKS+F+
Sbjct: 1   MASSSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSIEKSNFH 44


>ref|XP_011087584.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Sesamum indicum]
          Length = 770

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 31/43 (72%), Positives = 34/43 (79%)
 Frame = -1

Query: 175 MACSSSIIGVSSIYQTTPSLELSKRLTSNPPLSLPFPAEKSHF 47
           MACSSSIIGVSSIYQT PSL+ SKR TS PPL+L F A  + F
Sbjct: 1   MACSSSIIGVSSIYQTNPSLDHSKRPTSAPPLALHFSAAHNPF 43


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