BLASTX nr result

ID: Gardenia21_contig00005326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00005326
         (292 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP17754.1| unnamed protein product [Coffea canephora]            102   1e-19
ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    67   4e-09
ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    67   5e-09
ref|XP_011087584.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    61   3e-07

>emb|CDP17754.1| unnamed protein product [Coffea canephora]
          Length = 779

 Score =  102 bits (253), Expect = 1e-19
 Identities = 52/58 (89%), Positives = 52/58 (89%)
 Frame = -1

Query: 175 MACSSSIIGVSSIYQTTPSLEFSKRLTSNPPLSLPFPAEKSHFYGLKVTAPSAASSSS 2
           MAC SSIIGVSSIYQTTPSLE SKR TS PPLS PFPAEKSHFYGLKVTA SAASSSS
Sbjct: 1   MACPSSIIGVSSIYQTTPSLELSKRPTSTPPLSFPFPAEKSHFYGLKVTATSAASSSS 58


>ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 36/57 (63%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = -1

Query: 175 MACSSSIIGVSSIYQTTPSLEFSKRLTSNPPLSLPFPAEKSHFY-GLKVTAPSAASS 8
           MA SSSIIGVSSIYQT PSLE S+R T+ PPLSLPF  EKS+F+  +++  P  AS+
Sbjct: 1   MASSSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSTEKSNFHVHVRLRRPFLASA 57


>ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Solanum lycopersicum]
          Length = 746

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 36/57 (63%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = -1

Query: 175 MACSSSIIGVSSIYQTTPSLEFSKRLTSNPPLSLPFPAEKSHFY-GLKVTAPSAASS 8
           MA SSSIIGVSSIYQT PSLE S+R T+ PPLSLPF  EKS+F+  +++  P  AS+
Sbjct: 1   MASSSSIIGVSSIYQTNPSLELSRRPTATPPLSLPFSIEKSNFHVHVRLRRPFLASA 57


>ref|XP_011087584.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Sesamum indicum]
          Length = 770

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 35/61 (57%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
 Frame = -1

Query: 175 MACSSSIIGVSSIYQTTPSLEFSKRLTSNPPLSLPFPAEKSHF----YGLKVTAPSAASS 8
           MACSSSIIGVSSIYQT PSL+ SKR TS PPL+L F A  + F    +  ++ A + AS+
Sbjct: 1   MACSSSIIGVSSIYQTNPSLDHSKRPTSAPPLALHFSAAHNPFRAFSFAGRLKAAAGASN 60

Query: 7   S 5
           S
Sbjct: 61  S 61


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