BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00005263
         (1765 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDO99732.1| unnamed protein product [Coffea canephora]            666   0.0  
ref|XP_009589062.1| PREDICTED: RNA pseudouridine synthase 5 isof...   542   e-151
ref|XP_009589060.1| PREDICTED: RNA pseudouridine synthase 5 isof...   536   e-149
ref|XP_009803600.1| PREDICTED: RNA pseudouridine synthase 5 isof...   532   e-148
ref|XP_009803599.1| PREDICTED: RNA pseudouridine synthase 5 isof...   525   e-146
ref|XP_010658419.1| PREDICTED: RNA pseudouridine synthase 5 isof...   523   e-145
ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like...   523   e-145
ref|XP_010317225.1| PREDICTED: RNA pseudouridine synthase 5 isof...   519   e-144
ref|XP_010317224.1| PREDICTED: RNA pseudouridine synthase 5 isof...   519   e-144
ref|XP_004233537.1| PREDICTED: RNA pseudouridine synthase 5 isof...   519   e-144
ref|XP_007009784.1| Pseudouridine synthase family protein [Theob...   518   e-144
ref|XP_009589057.1| PREDICTED: RNA pseudouridine synthase 5 isof...   517   e-143
ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like...   517   e-143
gb|KHG01532.1| hypothetical protein F383_21699 [Gossypium arboreum]   514   e-142
ref|XP_012452101.1| PREDICTED: RNA pseudouridine synthase 5 isof...   512   e-142
ref|XP_010669646.1| PREDICTED: RNA pseudouridine synthase 5 [Bet...   512   e-142
ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like...   511   e-142
ref|XP_009589056.1| PREDICTED: RNA pseudouridine synthase 5 isof...   511   e-141
ref|XP_009589063.1| PREDICTED: RNA pseudouridine synthase 5 isof...   509   e-141
ref|XP_008233344.1| PREDICTED: RNA pseudouridine synthase 5 isof...   509   e-141

>emb|CDO99732.1| unnamed protein product [Coffea canephora]
          Length = 416

 Score =  666 bits (1718), Expect = 0.0
 Identities = 340/415 (81%), Positives = 349/415 (84%), Gaps = 39/415 (9%)
 Frame = -1

Query: 1657 MSSSGEPLPSTAPLRLPIITFGEPWPDLNDGLTYHDLIPPRHAG---------------- 1526
            MSSSG+PLPST   RLPI+TFGEPWPDLNDGLTY DLIPP HAG                
Sbjct: 1    MSSSGKPLPSTTLPRLPIMTFGEPWPDLNDGLTYRDLIPPPHAGPYQPSQSFTYMRLIMF 60

Query: 1525 ----------------------LTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAVITD 1412
                                  LTVIEYYSKKYKNSAP           QIKVDGAVITD
Sbjct: 61   LALLTIFRSLFFIFWLPNNLTGLTVIEYYSKKYKNSAPVQGWLQRIKNKQIKVDGAVITD 120

Query: 1411 PDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLFQQRTVLT 1232
            P+TILRAGSELVYHRLPWKEPHAPYLLEVLFED+DLIALNKPSGLQVLPGGLFQQRTVL+
Sbjct: 121  PNTILRAGSELVYHRLPWKEPHAPYLLEVLFEDNDLIALNKPSGLQVLPGGLFQQRTVLS 180

Query: 1231 QLEWCANKGTSSCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAVRNES- 1055
            QLEW  NKGTSSCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAV NES 
Sbjct: 181  QLEWRTNKGTSSCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAVGNESC 240

Query: 1054 GNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASASGKPALSKV 875
             NARFNSTRKISKFYRALVSG+I QDQVVIDQPIGLVKYPGVAKGLYVASASGKPALSKV
Sbjct: 241  NNARFNSTRKISKFYRALVSGIIHQDQVVIDQPIGLVKYPGVAKGLYVASASGKPALSKV 300

Query: 874  SILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPICFDPEVIDES 695
            SILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQP CFDPE IDE 
Sbjct: 301  SILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPSCFDPEFIDEG 360

Query: 694  FAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQTEEECK 530
            FAQDGGYQRPENPVPGDCGYHLHAHQ+ LAHPTTHE IKI+APLPSIL TEEEC+
Sbjct: 361  FAQDGGYQRPENPVPGDCGYHLHAHQLFLAHPTTHEPIKIVAPLPSILATEEECR 415


>ref|XP_009589062.1| PREDICTED: RNA pseudouridine synthase 5 isoform X6 [Nicotiana
            tomentosiformis]
          Length = 381

 Score =  542 bits (1397), Expect = e-151
 Identities = 266/360 (73%), Positives = 304/360 (84%), Gaps = 3/360 (0%)
 Frame = -1

Query: 1597 FGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAVI 1418
            FGEPWP+ NDGLTYHD++ P  AGLT+IE+YS+KYK+SAP           QI VD  V+
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 1417 TDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLFQQRTV 1238
            T PDT LRAG+ELVYHRLPW+EP APYLL+VLFEDD LIALNKPSGLQVLPGGLFQQRTV
Sbjct: 76   TIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLFQQRTV 135

Query: 1237 LTQLEWCANKGTSS---CKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAV 1067
            LTQL+W  +K T+S   C++ H VPVHRLGRGTSG+LLCAKTKLAKS LAAYFA+GTS V
Sbjct: 136  LTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAEGTSVV 195

Query: 1066 RNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASASGKPA 887
             ++  N+     RKISK YRALVSGVID D+V+I QPIG +KYPGVAKGLYVAS SGKPA
Sbjct: 196  EDKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASPSGKPA 255

Query: 886  LSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPICFDPEV 707
            LS V +LER+++N+STLVQVEIQSGRPHQIRIHLSFIG PL+GDPLYV+GGQP CFDPE+
Sbjct: 256  LSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPEL 315

Query: 706  IDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQTEEECKS 527
            +DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+ELIKI APLPSILQT EE K+
Sbjct: 316  MDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIKITAPLPSILQTREERKA 375


>ref|XP_009589060.1| PREDICTED: RNA pseudouridine synthase 5 isoform X5 [Nicotiana
            tomentosiformis]
          Length = 386

 Score =  536 bits (1381), Expect = e-149
 Identities = 266/365 (72%), Positives = 304/365 (83%), Gaps = 8/365 (2%)
 Frame = -1

Query: 1597 FGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAVI 1418
            FGEPWP+ NDGLTYHD++ P  AGLT+IE+YS+KYK+SAP           QI VD  V+
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 1417 TDPDTIL-----RAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLF 1253
            T PDT L     RAG+ELVYHRLPW+EP APYLL+VLFEDD LIALNKPSGLQVLPGGLF
Sbjct: 76   TIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLF 135

Query: 1252 QQRTVLTQLEWCANKGTSS---CKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFAD 1082
            QQRTVLTQL+W  +K T+S   C++ H VPVHRLGRGTSG+LLCAKTKLAKS LAAYFA+
Sbjct: 136  QQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAE 195

Query: 1081 GTSAVRNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASA 902
            GTS V ++  N+     RKISK YRALVSGVID D+V+I QPIG +KYPGVAKGLYVAS 
Sbjct: 196  GTSVVEDKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASP 255

Query: 901  SGKPALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPIC 722
            SGKPALS V +LER+++N+STLVQVEIQSGRPHQIRIHLSFIG PL+GDPLYV+GGQP C
Sbjct: 256  SGKPALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKC 315

Query: 721  FDPEVIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQTE 542
            FDPE++DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+ELIKI APLPSILQT 
Sbjct: 316  FDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIKITAPLPSILQTR 375

Query: 541  EECKS 527
            EE K+
Sbjct: 376  EERKA 380


>ref|XP_009803600.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Nicotiana
            sylvestris]
          Length = 384

 Score =  532 bits (1371), Expect = e-148
 Identities = 263/360 (73%), Positives = 302/360 (83%), Gaps = 3/360 (0%)
 Frame = -1

Query: 1597 FGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAVI 1418
            FGE W + NDGLTYHD++    AGLT+IE+YS+KYK+SAP           QI VDG V+
Sbjct: 19   FGETWREFNDGLTYHDIVRRIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDGKVV 78

Query: 1417 TDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLFQQRTV 1238
            T PDT LRAG+ELVYHRLPW+EP APYLL+VLFED+ LIALNKPSGLQVLPGGLFQQRTV
Sbjct: 79   TIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDNYLIALNKPSGLQVLPGGLFQQRTV 138

Query: 1237 LTQLEWCANKGTSS---CKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAV 1067
            LTQL+W  +K T+S   C++ H VPVHRLGRGTSG+LLCAKTKLAKS LAAYFA+GTS V
Sbjct: 139  LTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAEGTSVV 198

Query: 1066 RNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASASGKPA 887
             ++  N+     RKISK YRALVSGVID D+VVI QPIG +KYPGVAKGLYVAS SGKPA
Sbjct: 199  EDKYTNSECKKMRKISKIYRALVSGVIDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKPA 258

Query: 886  LSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPICFDPEV 707
            LS V +LER+++N+STLVQVEIQSGRPHQIRIHLSFIG PL+GDPLYV+GGQP CFDPE+
Sbjct: 259  LSSVRVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPEL 318

Query: 706  IDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQTEEECKS 527
            +DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+ELI+I APLPSILQT EE K+
Sbjct: 319  MDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIQITAPLPSILQTREEGKA 378


>ref|XP_009803599.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Nicotiana
            sylvestris]
          Length = 393

 Score =  525 bits (1353), Expect = e-146
 Identities = 262/369 (71%), Positives = 302/369 (81%), Gaps = 12/369 (3%)
 Frame = -1

Query: 1597 FGEPWPDLNDGLTYHDLIP---------PRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXX 1445
            FGE W + NDGLTYHD++           +  GLT+IE+YS+KYK+SAP           
Sbjct: 19   FGETWREFNDGLTYHDIVRRIDAGFLFCAKSTGLTLIEFYSRKYKSSAPLQGWLQRIQNK 78

Query: 1444 QIKVDGAVITDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLP 1265
            QI VDG V+T PDT LRAG+ELVYHRLPW+EP APYLL+VLFED+ LIALNKPSGLQVLP
Sbjct: 79   QITVDGKVVTIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDNYLIALNKPSGLQVLP 138

Query: 1264 GGLFQQRTVLTQLEWCANKGTSS---CKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAA 1094
            GGLFQQRTVLTQL+W  +K T+S   C++ H VPVHRLGRGTSG+LLCAKTKLAKS LAA
Sbjct: 139  GGLFQQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAA 198

Query: 1093 YFADGTSAVRNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLY 914
            YFA+GTS V ++  N+     RKISK YRALVSGVID D+VVI QPIG +KYPGVAKGLY
Sbjct: 199  YFAEGTSVVEDKYTNSECKKMRKISKIYRALVSGVIDMDEVVIKQPIGTIKYPGVAKGLY 258

Query: 913  VASASGKPALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGG 734
            VAS SGKPALS V +LER+++N+STLVQVEIQSGRPHQIRIHLSFIG PL+GDPLYV+GG
Sbjct: 259  VASPSGKPALSSVRVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGG 318

Query: 733  QPICFDPEVIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSI 554
            QP CFDPE++DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+ELI+I APLPSI
Sbjct: 319  QPKCFDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNELIQITAPLPSI 378

Query: 553  LQTEEECKS 527
            LQT EE K+
Sbjct: 379  LQTREEGKA 387


>ref|XP_010658419.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Vitis vinifera]
          Length = 393

 Score =  523 bits (1348), Expect = e-145
 Identities = 254/358 (70%), Positives = 298/358 (83%), Gaps = 3/358 (0%)
 Frame = -1

Query: 1600 TFGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAV 1421
            TFG PWPD NDGLTY+D++    + LT+I+YYS K+KNSAP           QI VDG V
Sbjct: 4    TFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTV 63

Query: 1420 ITDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLFQQRT 1241
            +T+P TILRAGS+LVYHRLPW+EP APYLLE+L+EDDD+IALNKPSGLQVLPGGLFQQRT
Sbjct: 64   VTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRT 123

Query: 1240 VLTQLEWCANKGTS--SCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAV 1067
            VLTQL+W ANK  S  +C++ H+VPVHRLGRGTSG+LLCAKTKLAK+ LAAYFADGTS V
Sbjct: 124  VLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVV 183

Query: 1066 R-NESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASASGKP 890
              N   + +  + RKISK YRALV+G++D+D++VI+QPIG+V+YPGVAKGLYVAS SGKP
Sbjct: 184  GGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKP 243

Query: 889  ALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPICFDPE 710
            ALSKVSILER+V+    +VQVEIQSGRPHQIRIHLSFIGHPLLGDPLYV GGQP C D E
Sbjct: 244  ALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAE 303

Query: 709  VIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQTEEE 536
              +ES+A DGGYQRP  PVPGDCGYHLHAHQ+ L+HPTT+E+IKI APLP +L+T  E
Sbjct: 304  FTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNEVIKITAPLPPVLRTRGE 361


>ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X3 [Solanum
            tuberosum]
          Length = 374

 Score =  523 bits (1347), Expect = e-145
 Identities = 257/364 (70%), Positives = 299/364 (82%), Gaps = 5/364 (1%)
 Frame = -1

Query: 1612 LPIIT--FGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQI 1439
            L ++T  FG  WP+LN+GLTYHD++ P  AGL +IE+Y +KYKNSAP           QI
Sbjct: 7    LAVVTAYFGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQI 66

Query: 1438 KVDGAVITDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGG 1259
             +DG V+  PDT LRAG+ELVYHRLPW+EP APYLLEVLF+DD LI +NKPSGLQVLPGG
Sbjct: 67   TIDGKVVILPDTELRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGG 126

Query: 1258 LFQQRTVLTQLEWCANKGT---SSCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYF 1088
            L+QQRTVLTQL+W A K T   S C++ H VPVHRLGRGTSG+LLCAKTKL KS LAAYF
Sbjct: 127  LYQQRTVLTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYF 186

Query: 1087 ADGTSAVRNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVA 908
            A+GTS V ++  N+  N+ RKI K YRALVSGV+D D+VVI QPIG +KYPGVAKGLYVA
Sbjct: 187  AEGTSVVEDKCTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVA 246

Query: 907  SASGKPALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQP 728
            S SGKPALS V +LER+ +N+ TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLYV+GGQP
Sbjct: 247  SPSGKPALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQP 306

Query: 727  ICFDPEVIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQ 548
             CF PE++DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+ELIKI APLP+ILQ
Sbjct: 307  KCFHPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQ 366

Query: 547  TEEE 536
            T EE
Sbjct: 367  TREE 370


>ref|XP_010317225.1| PREDICTED: RNA pseudouridine synthase 5 isoform X3 [Solanum
            lycopersicum] gi|723677756|ref|XP_010317226.1| PREDICTED:
            RNA pseudouridine synthase 5 isoform X3 [Solanum
            lycopersicum] gi|723677759|ref|XP_010317227.1| PREDICTED:
            RNA pseudouridine synthase 5 isoform X3 [Solanum
            lycopersicum]
          Length = 379

 Score =  519 bits (1337), Expect = e-144
 Identities = 253/357 (70%), Positives = 293/357 (82%), Gaps = 3/357 (0%)
 Frame = -1

Query: 1597 FGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAVI 1418
            FG PWP  N+GL+YHD++ P  AGLT+IE+Y +KYKNSAP           QI +DG V+
Sbjct: 14   FGVPWPQRNEGLSYHDIVRPTDAGLTLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73

Query: 1417 TDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLFQQRTV 1238
              PDT LRAG+ELVYHRLPW+EP APYLLEVLFEDD LI +NKPSGLQVLPGGL+QQRTV
Sbjct: 74   ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQRTV 133

Query: 1237 LTQLEWCANKGT---SSCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAV 1067
            LTQL+W A K T   S C++ H VPVHRLGRGTSG+LLCAKTKL KS LAAYFA+GTS V
Sbjct: 134  LTQLQWHACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 193

Query: 1066 RNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASASGKPA 887
              +  N+  N+ RKI K YRALVSGV+D D+ VI QPIG +KYPGVAKGLYVAS SGKPA
Sbjct: 194  EEKCTNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKPA 253

Query: 886  LSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPICFDPEV 707
            LS V +LER+ +++ TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLYV+GGQP CF PE+
Sbjct: 254  LSSVRVLERDSESNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPEL 313

Query: 706  IDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQTEEE 536
            +DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+ELIKI APLP+ILQT +E
Sbjct: 314  LDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRDE 370


>ref|XP_010317224.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Solanum
            lycopersicum]
          Length = 393

 Score =  519 bits (1337), Expect = e-144
 Identities = 253/357 (70%), Positives = 293/357 (82%), Gaps = 3/357 (0%)
 Frame = -1

Query: 1597 FGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAVI 1418
            FG PWP  N+GL+YHD++ P  AGLT+IE+Y +KYKNSAP           QI +DG V+
Sbjct: 28   FGVPWPQRNEGLSYHDIVRPTDAGLTLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 87

Query: 1417 TDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLFQQRTV 1238
              PDT LRAG+ELVYHRLPW+EP APYLLEVLFEDD LI +NKPSGLQVLPGGL+QQRTV
Sbjct: 88   ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQRTV 147

Query: 1237 LTQLEWCANKGT---SSCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAV 1067
            LTQL+W A K T   S C++ H VPVHRLGRGTSG+LLCAKTKL KS LAAYFA+GTS V
Sbjct: 148  LTQLQWHACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 207

Query: 1066 RNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASASGKPA 887
              +  N+  N+ RKI K YRALVSGV+D D+ VI QPIG +KYPGVAKGLYVAS SGKPA
Sbjct: 208  EEKCTNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKPA 267

Query: 886  LSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPICFDPEV 707
            LS V +LER+ +++ TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLYV+GGQP CF PE+
Sbjct: 268  LSSVRVLERDSESNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPEL 327

Query: 706  IDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQTEEE 536
            +DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+ELIKI APLP+ILQT +E
Sbjct: 328  LDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRDE 384


>ref|XP_004233537.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Solanum
            lycopersicum]
          Length = 402

 Score =  519 bits (1337), Expect = e-144
 Identities = 253/357 (70%), Positives = 293/357 (82%), Gaps = 3/357 (0%)
 Frame = -1

Query: 1597 FGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAVI 1418
            FG PWP  N+GL+YHD++ P  AGLT+IE+Y +KYKNSAP           QI +DG V+
Sbjct: 37   FGVPWPQRNEGLSYHDIVRPTDAGLTLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 96

Query: 1417 TDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLFQQRTV 1238
              PDT LRAG+ELVYHRLPW+EP APYLLEVLFEDD LI +NKPSGLQVLPGGL+QQRTV
Sbjct: 97   ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQRTV 156

Query: 1237 LTQLEWCANKGT---SSCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAV 1067
            LTQL+W A K T   S C++ H VPVHRLGRGTSG+LLCAKTKL KS LAAYFA+GTS V
Sbjct: 157  LTQLQWHACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 216

Query: 1066 RNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASASGKPA 887
              +  N+  N+ RKI K YRALVSGV+D D+ VI QPIG +KYPGVAKGLYVAS SGKPA
Sbjct: 217  EEKCTNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKPA 276

Query: 886  LSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPICFDPEV 707
            LS V +LER+ +++ TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLYV+GGQP CF PE+
Sbjct: 277  LSSVRVLERDSESNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPEL 336

Query: 706  IDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQTEEE 536
            +DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+ELIKI APLP+ILQT +E
Sbjct: 337  LDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRDE 393


>ref|XP_007009784.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508726697|gb|EOY18594.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 378

 Score =  518 bits (1333), Expect = e-144
 Identities = 250/361 (69%), Positives = 297/361 (82%), Gaps = 3/361 (0%)
 Frame = -1

Query: 1603 ITFGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGA 1424
            + FG PWP+LNDGL Y D+I P  + LT+IE+YS KYKNSAP           QI VDG 
Sbjct: 10   LVFGLPWPELNDGLFYDDVIKPSDSELTLIEFYSSKYKNSAPSQGWLQRIQNGQISVDGR 69

Query: 1423 VITDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLFQQR 1244
            V+ DP+TILR  SELVYHRLPWKEP AP+ LEVL+EDDD+IALNKPSGLQVLPGGLFQQR
Sbjct: 70   VVRDPNTILRGSSELVYHRLPWKEPDAPHALEVLYEDDDMIALNKPSGLQVLPGGLFQQR 129

Query: 1243 TVLTQLEWCANKGTSSC--KQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSA 1070
            TVLTQL W   K TSS   ++ H VPVHRLGRGTSG+LLCAKTK AK+CLAAYFADGTS 
Sbjct: 130  TVLTQLSWRMRKQTSSLASQESHPVPVHRLGRGTSGILLCAKTKAAKTCLAAYFADGTSL 189

Query: 1069 V-RNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASASGK 893
            +  N +   + + TRKISK YRALV+G++ +D+VVI+QPIG+V+YPGVAKGLYVAS SGK
Sbjct: 190  IGANSNRKMQPSCTRKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGLYVASPSGK 249

Query: 892  PALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPICFDP 713
            PALSKV +LE++ + + TLVQV+I+SGRPHQIRIHLSFIGHPLLGDPLY+AGGQP CFD 
Sbjct: 250  PALSKVEVLEKDEQQNHTLVQVQIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQPRCFDS 309

Query: 712  EVIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQTEEEC 533
            E +DE++AQDGGYQRP NPVPGDCGY+LHAH++ L+HPTT E+I I APLP +LQT++E 
Sbjct: 310  EFVDENYAQDGGYQRPVNPVPGDCGYYLHAHRLLLSHPTTDEIINITAPLPPVLQTQDEV 369

Query: 532  K 530
            +
Sbjct: 370  R 370


>ref|XP_009589057.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 436

 Score =  517 bits (1331), Expect = e-143
 Identities = 256/358 (71%), Positives = 296/358 (82%), Gaps = 5/358 (1%)
 Frame = -1

Query: 1597 FGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAVI 1418
            FGEPWP+ NDGLTYHD++ P  AGLT+IE+YS+KYK+SAP           QI VD  V+
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 1417 TDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLFQQRTV 1238
            T PDT LRAG+ELVYHRLPW+EP APYLL+VLFEDD LIALNKPSGLQVLPGGLFQQRTV
Sbjct: 76   TIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLFQQRTV 135

Query: 1237 LTQLEWCANKGTSS---CKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAV 1067
            LTQL+W  +K T+S   C++ H VPVHRLGRGTSG+LLCAKTKLAKS LAAYFA+GTS V
Sbjct: 136  LTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAEGTSVV 195

Query: 1066 RNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASASGKPA 887
             ++  N+     RKISK YRALVSGVID D+V+I QPIG +KYPGVAKGLYVAS SGKPA
Sbjct: 196  EDKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASPSGKPA 255

Query: 886  LSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPICFDPEV 707
            LS V +LER+++N+STLVQVEIQSGRPHQIRIHLSFIG PL+GDPLYV+GGQP CFDPE+
Sbjct: 256  LSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPEL 315

Query: 706  IDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHE--LIKIIAPLPSILQTEE 539
            +DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+E   + +IA L S+   EE
Sbjct: 316  MDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNENRCVNMIARLFSVPLEEE 373


>ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Solanum
            tuberosum] gi|565360441|ref|XP_006346976.1| PREDICTED:
            RNA pseudouridine synthase 5-like isoform X2 [Solanum
            tuberosum]
          Length = 379

 Score =  517 bits (1331), Expect = e-143
 Identities = 257/369 (69%), Positives = 299/369 (81%), Gaps = 10/369 (2%)
 Frame = -1

Query: 1612 LPIIT--FGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQI 1439
            L ++T  FG  WP+LN+GLTYHD++ P  AGL +IE+Y +KYKNSAP           QI
Sbjct: 7    LAVVTAYFGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQI 66

Query: 1438 KVDGAVITDPDTIL-----RAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQ 1274
             +DG V+  PDT L     RAG+ELVYHRLPW+EP APYLLEVLF+DD LI +NKPSGLQ
Sbjct: 67   TIDGKVVILPDTELSFWMCRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQ 126

Query: 1273 VLPGGLFQQRTVLTQLEWCANKGT---SSCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSC 1103
            VLPGGL+QQRTVLTQL+W A K T   S C++ H VPVHRLGRGTSG+LLCAKTKL KS 
Sbjct: 127  VLPGGLYQQRTVLTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSR 186

Query: 1102 LAAYFADGTSAVRNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAK 923
            LAAYFA+GTS V ++  N+  N+ RKI K YRALVSGV+D D+VVI QPIG +KYPGVAK
Sbjct: 187  LAAYFAEGTSVVEDKCTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAK 246

Query: 922  GLYVASASGKPALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYV 743
            GLYVAS SGKPALS V +LER+ +N+ TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLYV
Sbjct: 247  GLYVASPSGKPALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYV 306

Query: 742  AGGQPICFDPEVIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPL 563
            +GGQP CF PE++DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+ELIKI APL
Sbjct: 307  SGGQPKCFHPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPL 366

Query: 562  PSILQTEEE 536
            P+ILQT EE
Sbjct: 367  PAILQTREE 375


>gb|KHG01532.1| hypothetical protein F383_21699 [Gossypium arboreum]
          Length = 382

 Score =  514 bits (1323), Expect = e-142
 Identities = 251/364 (68%), Positives = 296/364 (81%), Gaps = 3/364 (0%)
 Frame = -1

Query: 1618 LRLPIITFGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQI 1439
            LR   + FG PWP+LN+GL Y D++P   + LT+I++YS+KYKNSAP           QI
Sbjct: 5    LRTQSLVFGIPWPELNEGLFYSDVVPHSDSELTLIDFYSRKYKNSAPIQGWLQRIQNGQI 64

Query: 1438 KVDGAVITDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGG 1259
             VDG V+ DP+TIL   S LVYHRLPWKEP  P+LLEVL+EDDD++ALNKPSGLQVLPGG
Sbjct: 65   SVDGRVVKDPNTILSGDSVLVYHRLPWKEPDVPHLLEVLYEDDDMVALNKPSGLQVLPGG 124

Query: 1258 LFQQRTVLTQLEWCANK--GTSSCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFA 1085
            LFQQRTVLTQL W   K   T + ++ H VPVHRLGRGTSG+LLCAKTK+AK+ LAAYFA
Sbjct: 125  LFQQRTVLTQLCWSVKKQNSTLNSQETHPVPVHRLGRGTSGILLCAKTKVAKTRLAAYFA 184

Query: 1084 DGTSAVRNESGN-ARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVA 908
            DGTS V   S   A  + TRKISK YRALV+G++  D+V+IDQPIG+V+YPGVA+GLYVA
Sbjct: 185  DGTSRVGATSNRKAERSGTRKISKIYRALVTGILVDDKVIIDQPIGIVRYPGVARGLYVA 244

Query: 907  SASGKPALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQP 728
            S SGKPALSKV +LER+ K + TLVQVEI+SGRPHQIRIHLSFIGHPLLGDPLY+AGGQP
Sbjct: 245  SPSGKPALSKVEVLERDEKQNCTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQP 304

Query: 727  ICFDPEVIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQ 548
             CFDPE++DESFAQDGGYQRP NPVPGDCGY+LHA+Q+ L+HPTT+E+I I APL SILQ
Sbjct: 305  RCFDPELVDESFAQDGGYQRPTNPVPGDCGYYLHAYQLVLSHPTTNEMISITAPLSSILQ 364

Query: 547  TEEE 536
            T +E
Sbjct: 365  TSDE 368


>ref|XP_012452101.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Gossypium
            raimondii] gi|763800749|gb|KJB67704.1| hypothetical
            protein B456_010G204900 [Gossypium raimondii]
          Length = 382

 Score =  512 bits (1319), Expect = e-142
 Identities = 250/363 (68%), Positives = 295/363 (81%), Gaps = 3/363 (0%)
 Frame = -1

Query: 1615 RLPIITFGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIK 1436
            R   + FG PWP+LNDGL Y D++P   + LT+I++YS+KYKNSAP           QI 
Sbjct: 6    RTQSLVFGIPWPELNDGLFYSDVVPHSDSELTLIDFYSRKYKNSAPLQGWLQRIQNGQIS 65

Query: 1435 VDGAVITDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGL 1256
            VDG V+ DP+TIL   S LVYHRLPWKEP  P+LLEVL+EDDD++ALNKPSGLQVLPGGL
Sbjct: 66   VDGRVVKDPNTILSGDSVLVYHRLPWKEPDVPHLLEVLYEDDDMVALNKPSGLQVLPGGL 125

Query: 1255 FQQRTVLTQLEWCANK--GTSSCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFAD 1082
            FQQRTVLTQL W   K   T + ++ H VPVHRLGRGTSG+LLCAKTK+AK+ LAAYFAD
Sbjct: 126  FQQRTVLTQLCWSVKKQNSTLNSQETHPVPVHRLGRGTSGILLCAKTKVAKTRLAAYFAD 185

Query: 1081 GTSAVRNESGN-ARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVAS 905
            GTS V   S   A  + TRKISK YRALV+G++  D+V+IDQPIG+V+YPGVAKGLYVAS
Sbjct: 186  GTSLVGATSNRKAARSGTRKISKIYRALVTGILVDDKVIIDQPIGIVRYPGVAKGLYVAS 245

Query: 904  ASGKPALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPI 725
             SGKPALSKV +LER+ K + TLVQVEI+SGRPHQIRIHLSFIGHPLLGDPLY+AGG+P 
Sbjct: 246  PSGKPALSKVEVLERDEKQNCTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYIAGGEPR 305

Query: 724  CFDPEVIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQT 545
            CFDPE++DESFAQDGGYQRP NPVPGDCGY+LHAH++ L+HPTT+E+I I APL +ILQT
Sbjct: 306  CFDPELVDESFAQDGGYQRPTNPVPGDCGYYLHAHRLVLSHPTTNEMIYITAPLSTILQT 365

Query: 544  EEE 536
             +E
Sbjct: 366  SDE 368


>ref|XP_010669646.1| PREDICTED: RNA pseudouridine synthase 5 [Beta vulgaris subsp.
            vulgaris] gi|870866740|gb|KMT17673.1| hypothetical
            protein BVRB_2g036190 [Beta vulgaris subsp. vulgaris]
          Length = 362

 Score =  512 bits (1319), Expect = e-142
 Identities = 249/360 (69%), Positives = 297/360 (82%), Gaps = 3/360 (0%)
 Frame = -1

Query: 1600 TFGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAV 1421
            T G PWP+LNDGLTY+D++ P H+GLT+I++YS  + +SAP           QI +DG+ 
Sbjct: 3    TIGIPWPELNDGLTYNDVVSPSHSGLTLIQFYSSNHTSSAPLQGWVQRIHNGQITIDGST 62

Query: 1420 ITDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLFQQRT 1241
            +TDP TILRA S+LVYHRLPW+EP  P+LLEVLFEDDD+IALNKPSGLQVLPGGLFQQRT
Sbjct: 63   VTDPVTILRADSKLVYHRLPWREPDTPFLLEVLFEDDDMIALNKPSGLQVLPGGLFQQRT 122

Query: 1240 VLTQLEWCANK-GTSSCKQP-HAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFADGTSAV 1067
            VLTQL+W   K G S+  Q  + VPVHRLGRGTSGVLLCAKTK+AK+CLAAYFADGTS V
Sbjct: 123  VLTQLKWHTQKNGNSTLSQVLNPVPVHRLGRGTSGVLLCAKTKIAKTCLAAYFADGTSLV 182

Query: 1066 RNESG-NARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASASGKP 890
            R +   N++    R+I+K YRALV G+ID ++V+ID+PIG+++YPGVAKGLYVA  SGKP
Sbjct: 183  RGKRDVNSKMEVERRITKIYRALVRGIIDSNEVLIDKPIGVMRYPGVAKGLYVALPSGKP 242

Query: 889  ALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPICFDPE 710
            ALSKV +LER+V+   TLVQVEIQSGRPHQIRIHLS IG PLLGDPLYVAGGQP CFDPE
Sbjct: 243  ALSKVGVLERDVERDQTLVQVEIQSGRPHQIRIHLSLIGCPLLGDPLYVAGGQPECFDPE 302

Query: 709  VIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQTEEECK 530
            +I E FA+DGGYQRP  PVPGDCGYHLHAH++ L+HP+T+E IKIIAPLPS+L+T EE +
Sbjct: 303  LIQEDFAEDGGYQRPAKPVPGDCGYHLHAHEVTLSHPSTNEAIKIIAPLPSMLKTVEEAR 362


>ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X2 [Citrus
            sinensis] gi|568865018|ref|XP_006485881.1| PREDICTED: RNA
            pseudouridine synthase 5-like isoform X3 [Citrus
            sinensis]
          Length = 389

 Score =  511 bits (1316), Expect = e-142
 Identities = 250/362 (69%), Positives = 295/362 (81%), Gaps = 2/362 (0%)
 Frame = -1

Query: 1615 RLPIITFGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIK 1436
            +L +  FGEPWP LN+GL Y+D++ P  + LT+IE+YS K+KNSAP           QI 
Sbjct: 7    QLALAVFGEPWPQLNEGLLYNDVVSPSDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQIT 66

Query: 1435 VDGAVITDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGL 1256
            VDG V+ DP+ IL AGSELVYHRLPWKEP  PYLLEV +EDDDLIALNKPSGLQVLPGGL
Sbjct: 67   VDGRVVNDPNIILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGL 126

Query: 1255 FQQRTVLTQLEWCANKGTSSCKQP--HAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFAD 1082
            FQQRTVL QL+W A+K +SS      H VPVHRLGRGTSG+LLCAKTKLAK+C+AAYFAD
Sbjct: 127  FQQRTVLKQLQWRASKQSSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFAD 186

Query: 1081 GTSAVRNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASA 902
             TS V  ++      S RKI+K YRALV G++D+D+V+I QPIG+V+YPGVAKGLYVAS 
Sbjct: 187  KTSVVDADNTVMEL-SQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASP 245

Query: 901  SGKPALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPIC 722
            SGKPALSKV +LER+V+ + TLVQVEIQSGRPHQIRIHL+F+GHPLLGDPLYVAGGQP  
Sbjct: 246  SGKPALSKVDVLERDVQRNCTLVQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKS 305

Query: 721  FDPEVIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAPLPSILQTE 542
            FD E  D +FAQDGGY+RP NPVPGDCGY+LHA+Q+ L+HPTT+E+IKI APLPS+L+T 
Sbjct: 306  FDSEFADGTFAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTR 365

Query: 541  EE 536
            EE
Sbjct: 366  EE 367


>ref|XP_009589056.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 441

 Score =  511 bits (1315), Expect = e-141
 Identities = 256/363 (70%), Positives = 296/363 (81%), Gaps = 10/363 (2%)
 Frame = -1

Query: 1597 FGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAVI 1418
            FGEPWP+ NDGLTYHD++ P  AGLT+IE+YS+KYK+SAP           QI VD  V+
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 1417 TDPDTIL-----RAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLF 1253
            T PDT L     RAG+ELVYHRLPW+EP APYLL+VLFEDD LIALNKPSGLQVLPGGLF
Sbjct: 76   TIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLF 135

Query: 1252 QQRTVLTQLEWCANKGTSS---CKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFAD 1082
            QQRTVLTQL+W  +K T+S   C++ H VPVHRLGRGTSG+LLCAKTKLAKS LAAYFA+
Sbjct: 136  QQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAE 195

Query: 1081 GTSAVRNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASA 902
            GTS V ++  N+     RKISK YRALVSGVID D+V+I QPIG +KYPGVAKGLYVAS 
Sbjct: 196  GTSVVEDKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASP 255

Query: 901  SGKPALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPIC 722
            SGKPALS V +LER+++N+STLVQVEIQSGRPHQIRIHLSFIG PL+GDPLYV+GGQP C
Sbjct: 256  SGKPALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKC 315

Query: 721  FDPEVIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHE--LIKIIAPLPSILQ 548
            FDPE++DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+E   + +IA L S+  
Sbjct: 316  FDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNENRCVNMIARLFSVPL 375

Query: 547  TEE 539
             EE
Sbjct: 376  EEE 378


>ref|XP_009589063.1| PREDICTED: RNA pseudouridine synthase 5 isoform X7 [Nicotiana
            tomentosiformis]
          Length = 367

 Score =  509 bits (1312), Expect = e-141
 Identities = 250/347 (72%), Positives = 289/347 (83%), Gaps = 8/347 (2%)
 Frame = -1

Query: 1597 FGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXXXXXXQIKVDGAVI 1418
            FGEPWP+ NDGLTYHD++ P  AGLT+IE+YS+KYK+SAP           QI VD  V+
Sbjct: 16   FGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWLQRIQNKQITVDSKVV 75

Query: 1417 TDPDTIL-----RAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGLQVLPGGLF 1253
            T PDT L     RAG+ELVYHRLPW+EP APYLL+VLFEDD LIALNKPSGLQVLPGGLF
Sbjct: 76   TIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLF 135

Query: 1252 QQRTVLTQLEWCANKGTSS---CKQPHAVPVHRLGRGTSGVLLCAKTKLAKSCLAAYFAD 1082
            QQRTVLTQL+W  +K T+S   C++ H VPVHRLGRGTSG+LLCAKTKLAKS LAAYFA+
Sbjct: 136  QQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAE 195

Query: 1081 GTSAVRNESGNARFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVAKGLYVASA 902
            GTS V ++  N+     RKISK YRALVSGVID D+V+I QPIG +KYPGVAKGLYVAS 
Sbjct: 196  GTSVVEDKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASP 255

Query: 901  SGKPALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPIC 722
            SGKPALS V +LER+++N+STLVQVEIQSGRPHQIRIHLSFIG PL+GDPLYV+GGQP C
Sbjct: 256  SGKPALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKC 315

Query: 721  FDPEVIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELI 581
            FDPE++DESF +DGGYQRPENPVPGDCGY+LHAHQ+ L HP T+E++
Sbjct: 316  FDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNEIL 362


>ref|XP_008233344.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Prunus mume]
          Length = 393

 Score =  509 bits (1312), Expect = e-141
 Identities = 249/370 (67%), Positives = 301/370 (81%), Gaps = 3/370 (0%)
 Frame = -1

Query: 1636 LPSTAPLRLPIITFGEPWPDLNDGLTYHDLIPPRHAGLTVIEYYSKKYKNSAPFXXXXXX 1457
            + S++P R P  TFG PWPDLN GL Y+D++    + LT+IE+YS KYKNSAP       
Sbjct: 1    MSSSSPTRQPQ-TFGLPWPDLNHGLLYNDVVRASDSELTLIEFYSSKYKNSAPLQGWLQR 59

Query: 1456 XXXXQIKVDGAVITDPDTILRAGSELVYHRLPWKEPHAPYLLEVLFEDDDLIALNKPSGL 1277
                QI VDG V+ DP TILR G ELVYHRLPW+EP APYLLEVL+EDDD+IALNKPSGL
Sbjct: 60   IRNGQITVDGEVVKDPSTILRVGLELVYHRLPWREPDAPYLLEVLYEDDDMIALNKPSGL 119

Query: 1276 QVLPGGLFQQRTVLTQLEWCANKGTS--SCKQPHAVPVHRLGRGTSGVLLCAKTKLAKSC 1103
            QVLPGGLFQQRTVLTQL W A K  S  SC++PH VPVHRLGRGTSG+LLCAKTK AK+ 
Sbjct: 120  QVLPGGLFQQRTVLTQLLWQATKKISPLSCQEPHPVPVHRLGRGTSGILLCAKTKHAKTQ 179

Query: 1102 LAAYFADGTSAVRNESGNA-RFNSTRKISKFYRALVSGVIDQDQVVIDQPIGLVKYPGVA 926
            LAAYFADGTS + ++S  +   ++ RKISK YRALV+G++ +D+V++ QPIG+V+YPGVA
Sbjct: 180  LAAYFADGTSNIGDDSNTSMEAHAVRKISKIYRALVTGILCEDKVIVKQPIGVVRYPGVA 239

Query: 925  KGLYVASASGKPALSKVSILERNVKNSSTLVQVEIQSGRPHQIRIHLSFIGHPLLGDPLY 746
            KGLYVASA+GKPALSKV +LER +  + TLVQVEIQSGRPHQIRIHLS+IGHPLLGDPLY
Sbjct: 240  KGLYVASATGKPALSKVEVLEREIHKNRTLVQVEIQSGRPHQIRIHLSYIGHPLLGDPLY 299

Query: 745  VAGGQPICFDPEVIDESFAQDGGYQRPENPVPGDCGYHLHAHQMCLAHPTTHELIKIIAP 566
            V GGQP C D + +DESFA DGG+ RP  PVPGDCGY+LHAHQ+ L+HP+++E+IK+ AP
Sbjct: 300  VLGGQPKCLDSDFVDESFAVDGGFLRPTKPVPGDCGYNLHAHQVILSHPSSNEVIKVTAP 359

Query: 565  LPSILQTEEE 536
            LP+IL+T++E
Sbjct: 360  LPAILRTQQE 369