BLASTX nr result
ID: Gardenia21_contig00004034
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00004034
(632 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007044696.1| RNA polymerases N / 8 kDa subunit [Theobroma... 150 8e-34
ref|XP_006381558.1| hypothetical protein POPTR_0006s13850g [Popu... 150 8e-34
ref|XP_007225838.1| hypothetical protein PRUPE_ppa014395mg [Prun... 147 4e-33
ref|XP_012085063.1| PREDICTED: DNA-directed RNA polymerase subun... 147 5e-33
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 147 5e-33
gb|KHG15012.1| hypothetical protein F383_19444 [Gossypium arboreum] 147 6e-33
ref|XP_010533946.1| PREDICTED: DNA-directed RNA polymerase subun... 146 8e-33
ref|XP_010248514.1| PREDICTED: DNA-directed RNA polymerases I, I... 146 8e-33
ref|XP_008373233.1| PREDICTED: DNA-directed RNA polymerase subun... 146 8e-33
ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, I... 146 8e-33
ref|XP_009405913.1| PREDICTED: DNA-directed RNA polymerase subun... 146 1e-32
ref|XP_006828771.1| PREDICTED: DNA-directed RNA polymerases I, I... 146 1e-32
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221... 146 1e-32
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid... 146 1e-32
ref|XP_009611116.1| PREDICTED: DNA-directed RNA polymerases I, I... 145 2e-32
ref|XP_009105127.1| PREDICTED: DNA-directed RNA polymerase subun... 145 2e-32
ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, I... 145 2e-32
ref|XP_010696273.1| PREDICTED: DNA-directed RNA polymerases I, I... 145 2e-32
ref|XP_010547747.1| PREDICTED: DNA-directed RNA polymerases I, I... 145 2e-32
ref|XP_009406145.1| PREDICTED: DNA-directed RNA polymerase subun... 145 2e-32
>ref|XP_007044696.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
gi|508708631|gb|EOY00528.1| RNA polymerases N / 8 kDa
subunit [Theobroma cacao]
Length = 113
Score = 150 bits (378), Expect = 8e-34
Identities = 70/72 (97%), Positives = 72/72 (100%)
Frame = -1
Query: 596 LEKMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE 417
L++MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE
Sbjct: 40 LKRMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE 99
Query: 416 KLLNYNTLEKSE 381
KLLNYNTLEKSE
Sbjct: 100 KLLNYNTLEKSE 111
>ref|XP_006381558.1| hypothetical protein POPTR_0006s13850g [Populus trichocarpa]
gi|743847658|ref|XP_011028034.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5 [Populus
euphratica] gi|743893319|ref|XP_011039912.1| PREDICTED:
DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Populus euphratica] gi|118486243|gb|ABK94963.1|
unknown [Populus trichocarpa]
gi|550336264|gb|ERP59355.1| hypothetical protein
POPTR_0006s13850g [Populus trichocarpa]
gi|661880292|emb|CDP16088.1| unnamed protein product
[Coffea canephora]
Length = 71
Score = 150 bits (378), Expect = 8e-34
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSEGT 375
NYNTLEKSEG+
Sbjct: 61 NYNTLEKSEGS 71
>ref|XP_007225838.1| hypothetical protein PRUPE_ppa014395mg [Prunus persica]
gi|645230244|ref|XP_008221846.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5 [Prunus
mume] gi|462422774|gb|EMJ27037.1| hypothetical protein
PRUPE_ppa014395mg [Prunus persica]
Length = 71
Score = 147 bits (372), Expect = 4e-33
Identities = 69/71 (97%), Positives = 70/71 (98%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSEGT 375
NYNTLEKSE +
Sbjct: 61 NYNTLEKSENS 71
>ref|XP_012085063.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Jatropha curcas]
Length = 71
Score = 147 bits (371), Expect = 5e-33
Identities = 68/71 (95%), Positives = 71/71 (100%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSEGT 375
NYNTLE+SEG+
Sbjct: 61 NYNTLERSEGS 71
>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Vitis vinifera] gi|590591838|ref|XP_007017127.1|
RNA polymerases N / 8 kDa subunit [Theobroma cacao]
gi|823159079|ref|XP_012479370.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5 [Gossypium
raimondii] gi|823210482|ref|XP_012438264.1| PREDICTED:
DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Gossypium raimondii]
gi|297739069|emb|CBI28558.3| unnamed protein product
[Vitis vinifera] gi|508787490|gb|EOY34746.1| RNA
polymerases N / 8 kDa subunit [Theobroma cacao]
gi|763763956|gb|KJB31210.1| hypothetical protein
B456_005G181100 [Gossypium raimondii]
gi|763783160|gb|KJB50231.1| hypothetical protein
B456_008G159800 [Gossypium raimondii]
gi|763783161|gb|KJB50232.1| hypothetical protein
B456_008G159800 [Gossypium raimondii]
Length = 71
Score = 147 bits (371), Expect = 5e-33
Identities = 69/69 (100%), Positives = 69/69 (100%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSE 381
NYNTLEKSE
Sbjct: 61 NYNTLEKSE 69
>gb|KHG15012.1| hypothetical protein F383_19444 [Gossypium arboreum]
Length = 71
Score = 147 bits (370), Expect = 6e-33
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGK+IGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKIIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSE 381
NYNTLEKSE
Sbjct: 61 NYNTLEKSE 69
>ref|XP_010533946.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Tarenaya hassleriana]
Length = 71
Score = 146 bits (369), Expect = 8e-33
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSEGT 375
NYNTLEKS+ T
Sbjct: 61 NYNTLEKSDNT 71
>ref|XP_010248514.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Nelumbo nucifera]
gi|720082477|ref|XP_010242603.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5 [Nelumbo
nucifera]
Length = 71
Score = 146 bits (369), Expect = 8e-33
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSEGT 375
NYNTLEK+E +
Sbjct: 61 NYNTLEKTESS 71
>ref|XP_008373233.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Malus domestica] gi|694380404|ref|XP_009366337.1|
PREDICTED: DNA-directed RNA polymerase subunit 10-like
protein [Pyrus x bretschneideri]
gi|694384911|ref|XP_009368326.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein [Pyrus x
bretschneideri] gi|694445647|ref|XP_009349247.1|
PREDICTED: DNA-directed RNA polymerase subunit 10-like
protein [Pyrus x bretschneideri]
Length = 71
Score = 146 bits (369), Expect = 8e-33
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSEGT 375
NYNTLEKS+ +
Sbjct: 61 NYNTLEKSDAS 71
>ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Fragaria vesca subsp. vesca]
Length = 71
Score = 146 bits (369), Expect = 8e-33
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSEGT 375
NYNTLEKS+ +
Sbjct: 61 NYNTLEKSDNS 71
>ref|XP_009405913.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Musa acuminata subsp. malaccensis]
Length = 71
Score = 146 bits (368), Expect = 1e-32
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSE 381
NYNTLEK+E
Sbjct: 61 NYNTLEKTE 69
>ref|XP_006828771.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Amborella trichopoda]
gi|586757438|ref|XP_006853572.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5 [Amborella
trichopoda] gi|548833750|gb|ERM96187.1| hypothetical
protein AMTR_s00001p00093860 [Amborella trichopoda]
gi|548857225|gb|ERN15039.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
Length = 71
Score = 146 bits (368), Expect = 1e-32
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSE 381
NYNTLEK+E
Sbjct: 61 NYNTLEKNE 69
>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
[Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
[Picea sitchensis]
Length = 71
Score = 146 bits (368), Expect = 1e-32
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSE 381
NYNTLE+SE
Sbjct: 61 NYNTLERSE 69
>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
balbisiana]
Length = 70
Score = 146 bits (368), Expect = 1e-32
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSE 381
NYNTLEK+E
Sbjct: 61 NYNTLEKTE 69
>ref|XP_009611116.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Nicotiana tomentosiformis]
gi|698547619|ref|XP_009768090.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC5 [Nicotiana
sylvestris] gi|698564255|ref|XP_009772933.1| PREDICTED:
DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Nicotiana sylvestris]
Length = 71
Score = 145 bits (366), Expect = 2e-32
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWD YLDLLQADY+EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDEYLDLLQADYSEGDALDALNLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSEGT 375
NYNTLEKSEGT
Sbjct: 61 NYNTLEKSEGT 71
>ref|XP_009105127.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Brassica rapa] gi|922414691|ref|XP_013591461.1|
PREDICTED: DNA-directed RNA polymerase subunit 10-like
protein [Brassica oleracea var. oleracea]
gi|923737537|ref|XP_013670204.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein [Brassica napus]
gi|923737636|ref|XP_013670232.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein [Brassica napus]
gi|674879856|emb|CDY52320.1| BnaA01g36190D [Brassica
napus]
Length = 71
Score = 145 bits (366), Expect = 2e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDA+GLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAIGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSE 381
NYNTLEKS+
Sbjct: 61 NYNTLEKSD 69
>ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Brachypodium distachyon]
gi|944056359|gb|KQJ91997.1| hypothetical protein
BRADI_4g41090 [Brachypodium distachyon]
Length = 71
Score = 145 bits (366), Expect = 2e-32
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSEGT 375
NYNTLEK+E T
Sbjct: 61 NYNTLEKTEAT 71
>ref|XP_010696273.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Beta vulgaris subsp. vulgaris]
gi|870844052|gb|KMS97111.1| hypothetical protein
BVRB_7g178930 [Beta vulgaris subsp. vulgaris]
gi|902213788|gb|KNA17337.1| hypothetical protein
SOVF_080850 [Spinacia oleracea]
gi|902233825|gb|KNA23210.1| hypothetical protein
SOVF_026860 [Spinacia oleracea]
Length = 71
Score = 145 bits (365), Expect = 2e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSE 381
NYNTL+KS+
Sbjct: 61 NYNTLDKSD 69
>ref|XP_010547747.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Tarenaya hassleriana]
Length = 71
Score = 145 bits (365), Expect = 2e-32
Identities = 67/71 (94%), Positives = 70/71 (98%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSEGT 375
NYNTLEKS+ +
Sbjct: 61 NYNTLEKSDNS 71
>ref|XP_009406145.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein
[Musa acuminata subsp. malaccensis]
Length = 70
Score = 145 bits (365), Expect = 2e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = -1
Query: 587 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 408
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 407 NYNTLEKSE 381
NYNTLEK++
Sbjct: 61 NYNTLEKTD 69