BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00002961
         (4131 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP02141.1| unnamed protein product [Coffea canephora]           1961   0.0  
ref|XP_009588378.1| PREDICTED: DNA repair protein UVH3 isoform X...   942   0.0  
ref|XP_009588377.1| PREDICTED: DNA repair protein UVH3 isoform X...   942   0.0  
ref|XP_009801326.1| PREDICTED: DNA repair protein UVH3 [Nicotian...   931   0.0  
ref|XP_010317093.1| PREDICTED: DNA repair protein UVH3 isoform X...   902   0.0  
ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3 isoform X...   902   0.0  
ref|XP_006357145.1| PREDICTED: DNA repair protein UVH3-like isof...   893   0.0  
ref|XP_006357146.1| PREDICTED: DNA repair protein UVH3-like isof...   887   0.0  
ref|XP_011098511.1| PREDICTED: DNA repair protein UVH3 [Sesamum ...   876   0.0  
ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X...   850   0.0  
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X...   850   0.0  
ref|XP_012081974.1| PREDICTED: DNA repair protein UVH3 [Jatropha...   830   0.0  
ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 ...   803   0.0  
gb|KJB11471.1| hypothetical protein B456_001G260400 [Gossypium r...   789   0.0  
ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X...   788   0.0  
ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X...   788   0.0  
ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X...   788   0.0  
ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X...   788   0.0  
ref|XP_012444035.1| PREDICTED: DNA repair protein UVH3 isoform X...   788   0.0  
ref|XP_012444025.1| PREDICTED: DNA repair protein UVH3 isoform X...   788   0.0  

>emb|CDP02141.1| unnamed protein product [Coffea canephora]
          Length = 1523

 Score = 1961 bits (5079), Expect = 0.0
 Identities = 1040/1289 (80%), Positives = 1091/1289 (84%), Gaps = 16/1289 (1%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLLVQMRERLMAENRQKYQRVKKAP+RFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG
Sbjct: 231  LDLLVQMRERLMAENRQKYQRVKKAPSRFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 290

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGS+KSEQSQTAP NPSTSAVND A KT
Sbjct: 291  GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSKKSEQSQTAPVNPSTSAVNDVASKT 350

Query: 3771 KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIEEE 3592
            KH+AVAG TVDEPQRNFENDVETYLDERGRVR+SRVRAMGIRMTRDLQRNLDLMKEI+ E
Sbjct: 351  KHTAVAGSTVDEPQRNFENDVETYLDERGRVRVSRVRAMGIRMTRDLQRNLDLMKEIDGE 410

Query: 3591 NVCMTKSAIEKSTNCR-----PDNCSKVIPNLATCYQDSNGMTCVDENNDGRILNAGTSM 3427
            +VCMTKSAIE+STNC      P N SK IPNLATC QDSNGMTCVDENN+  ILNAGTSM
Sbjct: 411  SVCMTKSAIEESTNCSSVVDIPYNFSKGIPNLATCCQDSNGMTCVDENNEESILNAGTSM 470

Query: 3426 EISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDGDIEV 3247
            EISF+DNGQH+L       LFAHLVAGDPVMEFS+N SLSKKQSLDS SEPEWEDGDIEV
Sbjct: 471  EISFDDNGQHELGGEDDD-LFAHLVAGDPVMEFSINDSLSKKQSLDSTSEPEWEDGDIEV 529

Query: 3246 EGGTLDNKLKGKPLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALEEEADL 3067
            E GT +NKLKGKPLLPDGM DENDL  EDGS  IQE AS FSGE +DIVSKGALEEEADL
Sbjct: 530  EAGTSNNKLKGKPLLPDGMRDENDLGCEDGSLGIQEEAS-FSGEYLDIVSKGALEEEADL 588

Query: 3066 KEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGKMSQPPSTFNNK 2887
            KEAIRRSLQDLDDQRLVDTPD+DEKCGAT AVVSL  +SG +HKEVDGKMSQPPSTFNN+
Sbjct: 589  KEAIRRSLQDLDDQRLVDTPDEDEKCGATAAVVSLSRNSGFIHKEVDGKMSQPPSTFNNQ 648

Query: 2886 QHESPCHVQEDTNSPDSNIMETNSSLEVHLTPHLEGNYCTKDLLPEKACRSYSFLDPLMQ 2707
            QHESPCHVQE+T SPDSNI+ETNSSL+ HLTP+LE NY TKDLLPEKAC SY F+DPLMQ
Sbjct: 649  QHESPCHVQENTRSPDSNIVETNSSLDGHLTPYLEVNYGTKDLLPEKACGSYPFVDPLMQ 708

Query: 2706 DISGIKTSHREVHDAPVQEKDVSQFEVQLAPGTGDGIVADGLHNGFEA--AVGSHSDRTT 2533
            D+SG  TSH+EV   PVQEKDVS FE QLA GTGDGIVADGLHNG EA   V  H +RTT
Sbjct: 709  DVSGNNTSHQEVCGTPVQEKDVSPFEAQLASGTGDGIVADGLHNGSEAEAVVDGHLNRTT 768

Query: 2532 NIKEAFLKDLMIDTAQQGIEGEVHECREQHLGKAGSSDXXXXXXXXXXXXXXXXXXXXXX 2353
             IK A LKDLMIDTAQQ  EGEVHEC E+HLGK GSS                       
Sbjct: 769  EIKGASLKDLMIDTAQQCREGEVHECGEEHLGKDGSSYGRKEEARLEEEVLLLGEEQREL 828

Query: 2352 GDKQKKLERNAESVSSEMFAECQELLQIFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXX 2173
            GDKQKKLERNAESVSSEMFAECQELLQ+FG+PFIIAPMEAEAQCA+MEL           
Sbjct: 829  GDKQKKLERNAESVSSEMFAECQELLQMFGLPFIIAPMEAEAQCAFMELVNLVDGVVTDD 888

Query: 2172 XDAFLFGARNVYKNIFDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIG 1993
             DAFLFGARNV KNIFDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIG
Sbjct: 889  SDAFLFGARNVCKNIFDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIG 948

Query: 1992 IVNAIEVVNAFPEEDGLRRFREWIESPDPSILGKFDLQAEGSSKKIQSQVGETDMNCSDT 1813
            IVNAIEVVNAFPEEDGL RFREWIESPDPSILGKFDLQA  SSK+IQSQVGETDMNCSD 
Sbjct: 949  IVNAIEVVNAFPEEDGLHRFREWIESPDPSILGKFDLQAGSSSKQIQSQVGETDMNCSDA 1008

Query: 1812 KLGGVAACDADISGSVDDTQKLKQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKS 1633
            KLGGVAA DAD+SGSVDDTQKLKQIFMNKHRNVSKNWH+PSSFPSDAVISAYSSPQVDKS
Sbjct: 1009 KLGGVAARDADVSGSVDDTQKLKQIFMNKHRNVSKNWHIPSSFPSDAVISAYSSPQVDKS 1068

Query: 1632 TEPFSWGKPDHFVLRKLCWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFA 1453
            TEPFSWGKPDHFVLRKLCWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFA
Sbjct: 1069 TEPFSWGKPDHFVLRKLCWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFA 1128

Query: 1452 KIRSKRIKKAVRGITGKKSSDLMDESAQDGLRSKKKRR-NQAVAAGNKSEEACSGQEYAD 1276
            KIRSKRIKKAVRGITGKKS DLMDES QDGLRSKKKRR NQ VAAG+K EEA SGQEYAD
Sbjct: 1129 KIRSKRIKKAVRGITGKKSLDLMDESVQDGLRSKKKRRNNQDVAAGDKLEEASSGQEYAD 1188

Query: 1275 VGNEAKTTEEVNETEMRNIGSPGRPLHP-GGSGNRLPIEENFQXXXXXXXXXXXXXXXXX 1099
            VGNEAKTTE+VNETE+RNIGS GRPLHP GGS NRLP EENFQ                 
Sbjct: 1189 VGNEAKTTEKVNETELRNIGSLGRPLHPGGGSRNRLPSEENFQGRSRGVTVRKRGKARGR 1248

Query: 1098 XXXRSLPINKGGXXXXXXXXXXXSPDDEIYSNSAQGAQVSFGEQHQVRRSGRLRKEVKYS 919
                  PINKGG           SPDDEIYS+SAQ  QV+FGEQ+QVRRS R RKEV YS
Sbjct: 1249 GGASDHPINKGGIKSHSSEYSSSSPDDEIYSDSAQDVQVNFGEQNQVRRSRRPRKEVNYS 1308

Query: 918  EFNLKSDDPDWHDESSREGSGARKESSADAPEDFGAAVPSIISESENLDREPSWECLEKA 739
            EFNLKSDDPD  DESSREGSGARK SSAD  ED  AAVPS I+ESENLD+E SWE LEK 
Sbjct: 1309 EFNLKSDDPDSGDESSREGSGARKVSSADMLEDLTAAVPSKINESENLDQELSWEFLEKG 1368

Query: 738  DGYGVGKA-----TSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDDTTDRGLQGSAEC 574
            DGYGVGKA       QLNSSP++DIVSDT+LS EYL+VGGGFCLDE DTTD  LQGS++C
Sbjct: 1369 DGYGVGKAKEDMGADQLNSSPSNDIVSDTELSKEYLSVGGGFCLDE-DTTDGDLQGSSKC 1427

Query: 573  LRKATTFECDASKCSSLGED-TSKSPTRTVNPVQVERQGHLDTSYTT-KKNPDDNTNSDR 400
              K T FE D SKCS LGED  SKSPTR VNPVQ ER G+LDTSYTT  KNPD++ N DR
Sbjct: 1428 PGKVTAFESDPSKCSGLGEDEISKSPTRAVNPVQAERLGNLDTSYTTATKNPDESANRDR 1487

Query: 399  SEVASFQEIISEDDCGEDSSRYFRAMPNL 313
            SEVASFQEIIS+DD  +DSSRYFRAMPNL
Sbjct: 1488 SEVASFQEIISDDDYDKDSSRYFRAMPNL 1516


>ref|XP_009588378.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 1385

 Score =  942 bits (2436), Expect = 0.0
 Identities = 618/1352 (45%), Positives = 790/1352 (58%), Gaps = 79/1352 (5%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKK P +FSELQIQAYLKTVAFRREIDEVQKSAAGRG+G
Sbjct: 73   LDLLGQMRERLMAENRQKYQKVKKVPEKFSELQIQAYLKTVAFRREIDEVQKSAAGRGIG 132

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPAN--PSTSAVNDGAL 3778
            GV+T RIASEANREFIFS++F+GDK VL S GE   + + S+    N  P+++  +D A 
Sbjct: 133  GVRTKRIASEANREFIFSSSFTGDKDVLASAGEDHTRKKPSEVQTENSLPNSATASDAA- 191

Query: 3777 KTKHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIE 3598
             TK S+V    V EP   F +DVETYLDERG +R+SR+RAMG+RMTRDLQRNLD++KEIE
Sbjct: 192  -TKKSSVLESIVTEPGSAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDMIKEIE 250

Query: 3597 EENVCMTKS-----AIEKSTNCRPDNCSKVIPNLATCYQDSNGMTCVDENNDGRILNAGT 3433
            EE++   K       +  +    P N S  IP L +   D++G  C +  ++   L +GT
Sbjct: 251  EESLSRNKDFSDVPTVSDTAVHSPGNVSDTIPQLNSSNPDNDGKVCSNNKSEESELKSGT 310

Query: 3432 SMEISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDGDI 3253
            S++ISFEDN  H         +FAHLVAGDP MEFS++ SLSKKQSLDSAS+ EWE+G I
Sbjct: 311  SIQISFEDNFAHDCANDDDD-IFAHLVAGDPAMEFSIDHSLSKKQSLDSASDVEWEEGVI 369

Query: 3252 EVEGGTLDNKLKGKP---LLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALE 3082
            E +   L N  +G+    L  DG+ DE ++EWE+   DI +  S F  +   I SKGALE
Sbjct: 370  EEKYDLLSNNSQGESQATLEKDGIDDEVEVEWEEECVDICKEPSLFPFDSR-IASKGALE 428

Query: 3081 EEADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGKMSQPPS 2902
            EEA+ +EA+RRSL+DL D R +D   ++E       +V+ G+  GS     DG+ +  P 
Sbjct: 429  EEANYQEAVRRSLEDLRDHRCIDKSHENEMSEEAVQMVTQGIIIGS-----DGQDNNCPK 483

Query: 2901 TFNN-KQHESPCHVQEDTNSPDSNIMETNSSLEVHLTPHLEGNYCTKDLLPEKACRSYSF 2725
            ++   +Q E P  +Q       +++ +T     VH T   EGN C  + L E+   +  +
Sbjct: 484  SYEILQQKELPSEIQT------AHLHDT-----VHETDIAEGNNCLGNQLGEQFQANSGY 532

Query: 2724 LDPLMQDISGIKTSHREVH-------DAPVQEKDVSQFEVQLAPGTGDGIVADGLHNG-- 2572
             +  MQ       + R +H        AP+   +VS    ++A  T +  V+    +   
Sbjct: 533  RN--MQIEEATDQADRNLHCDIRMGPTAPLDGSEVSMIRKKIADTTVE--VSSNTKSAPD 588

Query: 2571 ----------------------FEAAVGSH--SDRTTNIKEAFLKDLMIDTAQQGIEGEV 2464
                                  +E+   SH  +  +T + +AF +  + DT       + 
Sbjct: 589  VTSIEQARFNELPNARTSDAQQYESGAASHHYTHESTELAKAFTEGFISDTNSAQKLDDE 648

Query: 2463 HECREQ---------HLGKAGSS-DXXXXXXXXXXXXXXXXXXXXXXGDKQKKLERNAES 2314
              C +          +L  AGS  D                      GD+Q+KLERNAES
Sbjct: 649  GTCDDPLLEGKDLFGNLDSAGSKEDQKVMMTSLEEEMHVLDKEREKLGDEQRKLERNAES 708

Query: 2313 VSSEMFAECQELLQIFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXXXDAFLFGARNVYK 2134
            VSSEMFAECQELLQ+FG+P+IIAPMEAEAQCAYMEL            DAFLFGARNVYK
Sbjct: 709  VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDAFLFGARNVYK 768

Query: 2133 NIFDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPE 1954
            NIFDDRKYVETYFMKD+ENELGL+REK+I MAL LGSDYTEGVSGIGIVNAIEV+NAFPE
Sbjct: 769  NIFDDRKYVETYFMKDVENELGLDREKIIRMALFLGSDYTEGVSGIGIVNAIEVLNAFPE 828

Query: 1953 EDGLRRFREWIESPDPSILGKFDLQAEGSSKKIQSQVGETDMNCSDTKLGGVAACDADIS 1774
            EDGL++FREW+ESPDPSILG  D QA  S++K  S+VG+ DM+CS + + G +A D ++ 
Sbjct: 829  EDGLQKFREWVESPDPSILGGLDAQASSSTRKRGSEVGDPDMSCSSSNVEGNSASDENVK 888

Query: 1773 GSVDDTQKLKQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFV 1594
             S D  QKLKQIFMNKHRN+SKNWH+PSSFPSDAVISAY+SP+VDKSTEPF+WGKPD  V
Sbjct: 889  -SEDRVQKLKQIFMNKHRNISKNWHIPSSFPSDAVISAYASPRVDKSTEPFAWGKPDVSV 947

Query: 1593 LRKLCWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRG 1414
            LRK+CWEKFGWS+QKADELL+PVLKEYNK ETQLRLEAFYTFNERFAKIRSKRIKKAV+ 
Sbjct: 948  LRKVCWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKH 1007

Query: 1413 ITGKKSSDLMDESAQDGLRSKKKRRNQ-AVAAGNKSEEACSGQEYADVG-NEAKTTEEVN 1240
            +TG KS +LMD S QD   + KKR  +       K E+   G E A     E KT   V 
Sbjct: 1008 MTGNKSMNLMDASVQDAPGTFKKRELKFNNVEEEKIEDPLMGLESAGADYEETKTKRSVG 1067

Query: 1239 ETEMRNIGSPGRPLH---PGGSGNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPI-- 1075
            +   +  G   +P H   P GSG++    +                        S     
Sbjct: 1068 KQSRKRKGEHLQPEHLEPPEGSGSKQNTNKKSSGGIGGGRKTARSAGKASKKSCSRSFKT 1127

Query: 1074 -NKGGXXXXXXXXXXXSPDDEIYSNSAQGAQVSFGEQ-HQVRRSGRLRKEVKYSEF-NLK 904
             ++GG             D++I     Q +Q+   E+  Q RRS R RK V YSE  +  
Sbjct: 1128 SSEGG------------KDNDI----EQQSQIEKLEKPKQARRSERHRKIVNYSEVRDDD 1171

Query: 903  SDDPDWHDESSREGSGARKESSAD------APEDFGAAVPSIISESENLDREPSWECLEK 742
            SD  D  D  S      R+ES AD       P+D      + +S     +   + E    
Sbjct: 1172 SDKVDKDDGDSTTDKLERRESGADVGIAERCPDDSSNMTENDVSNDYCPEGLSNPETSAD 1231

Query: 741  ADGYGVG-KATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDD-TTDRGLQGSAECLR 568
             D  G   ++  Q +    DD V    LSNEYL +GGGFCL+EDD   +  +  S+  L 
Sbjct: 1232 VDTGGAEMESAVQPSFGEMDDPVPGDLLSNEYLKMGGGFCLEEDDGAMEHEINASSPIL- 1290

Query: 567  KATTFECDASKCSS--LGEDT--SKSPTRTVNPVQVERQGHLDTSYTTKKNP---DDNTN 409
               + EC     SS  LG++   + S     +P     +   D      +N    D+ TN
Sbjct: 1291 ---SVECSDINNSSQLLGDEICGTASNQFVSSPSAKTSKKQCDARIGASENEQDLDNATN 1347

Query: 408  SDRSEVASFQEIISEDDCGEDSSRYFRAMPNL 313
            S   +V+S+QE  +ED+     S + RAMPNL
Sbjct: 1348 STCHKVSSYQE-NTEDNDYVLGSVFLRAMPNL 1378


>ref|XP_009588377.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 1542

 Score =  942 bits (2436), Expect = 0.0
 Identities = 618/1352 (45%), Positives = 790/1352 (58%), Gaps = 79/1352 (5%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKK P +FSELQIQAYLKTVAFRREIDEVQKSAAGRG+G
Sbjct: 230  LDLLGQMRERLMAENRQKYQKVKKVPEKFSELQIQAYLKTVAFRREIDEVQKSAAGRGIG 289

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPAN--PSTSAVNDGAL 3778
            GV+T RIASEANREFIFS++F+GDK VL S GE   + + S+    N  P+++  +D A 
Sbjct: 290  GVRTKRIASEANREFIFSSSFTGDKDVLASAGEDHTRKKPSEVQTENSLPNSATASDAA- 348

Query: 3777 KTKHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIE 3598
             TK S+V    V EP   F +DVETYLDERG +R+SR+RAMG+RMTRDLQRNLD++KEIE
Sbjct: 349  -TKKSSVLESIVTEPGSAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDMIKEIE 407

Query: 3597 EENVCMTKS-----AIEKSTNCRPDNCSKVIPNLATCYQDSNGMTCVDENNDGRILNAGT 3433
            EE++   K       +  +    P N S  IP L +   D++G  C +  ++   L +GT
Sbjct: 408  EESLSRNKDFSDVPTVSDTAVHSPGNVSDTIPQLNSSNPDNDGKVCSNNKSEESELKSGT 467

Query: 3432 SMEISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDGDI 3253
            S++ISFEDN  H         +FAHLVAGDP MEFS++ SLSKKQSLDSAS+ EWE+G I
Sbjct: 468  SIQISFEDNFAHDCANDDDD-IFAHLVAGDPAMEFSIDHSLSKKQSLDSASDVEWEEGVI 526

Query: 3252 EVEGGTLDNKLKGKP---LLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALE 3082
            E +   L N  +G+    L  DG+ DE ++EWE+   DI +  S F  +   I SKGALE
Sbjct: 527  EEKYDLLSNNSQGESQATLEKDGIDDEVEVEWEEECVDICKEPSLFPFDSR-IASKGALE 585

Query: 3081 EEADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGKMSQPPS 2902
            EEA+ +EA+RRSL+DL D R +D   ++E       +V+ G+  GS     DG+ +  P 
Sbjct: 586  EEANYQEAVRRSLEDLRDHRCIDKSHENEMSEEAVQMVTQGIIIGS-----DGQDNNCPK 640

Query: 2901 TFNN-KQHESPCHVQEDTNSPDSNIMETNSSLEVHLTPHLEGNYCTKDLLPEKACRSYSF 2725
            ++   +Q E P  +Q       +++ +T     VH T   EGN C  + L E+   +  +
Sbjct: 641  SYEILQQKELPSEIQT------AHLHDT-----VHETDIAEGNNCLGNQLGEQFQANSGY 689

Query: 2724 LDPLMQDISGIKTSHREVH-------DAPVQEKDVSQFEVQLAPGTGDGIVADGLHNG-- 2572
             +  MQ       + R +H        AP+   +VS    ++A  T +  V+    +   
Sbjct: 690  RN--MQIEEATDQADRNLHCDIRMGPTAPLDGSEVSMIRKKIADTTVE--VSSNTKSAPD 745

Query: 2571 ----------------------FEAAVGSH--SDRTTNIKEAFLKDLMIDTAQQGIEGEV 2464
                                  +E+   SH  +  +T + +AF +  + DT       + 
Sbjct: 746  VTSIEQARFNELPNARTSDAQQYESGAASHHYTHESTELAKAFTEGFISDTNSAQKLDDE 805

Query: 2463 HECREQ---------HLGKAGSS-DXXXXXXXXXXXXXXXXXXXXXXGDKQKKLERNAES 2314
              C +          +L  AGS  D                      GD+Q+KLERNAES
Sbjct: 806  GTCDDPLLEGKDLFGNLDSAGSKEDQKVMMTSLEEEMHVLDKEREKLGDEQRKLERNAES 865

Query: 2313 VSSEMFAECQELLQIFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXXXDAFLFGARNVYK 2134
            VSSEMFAECQELLQ+FG+P+IIAPMEAEAQCAYMEL            DAFLFGARNVYK
Sbjct: 866  VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDAFLFGARNVYK 925

Query: 2133 NIFDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPE 1954
            NIFDDRKYVETYFMKD+ENELGL+REK+I MAL LGSDYTEGVSGIGIVNAIEV+NAFPE
Sbjct: 926  NIFDDRKYVETYFMKDVENELGLDREKIIRMALFLGSDYTEGVSGIGIVNAIEVLNAFPE 985

Query: 1953 EDGLRRFREWIESPDPSILGKFDLQAEGSSKKIQSQVGETDMNCSDTKLGGVAACDADIS 1774
            EDGL++FREW+ESPDPSILG  D QA  S++K  S+VG+ DM+CS + + G +A D ++ 
Sbjct: 986  EDGLQKFREWVESPDPSILGGLDAQASSSTRKRGSEVGDPDMSCSSSNVEGNSASDENVK 1045

Query: 1773 GSVDDTQKLKQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFV 1594
             S D  QKLKQIFMNKHRN+SKNWH+PSSFPSDAVISAY+SP+VDKSTEPF+WGKPD  V
Sbjct: 1046 -SEDRVQKLKQIFMNKHRNISKNWHIPSSFPSDAVISAYASPRVDKSTEPFAWGKPDVSV 1104

Query: 1593 LRKLCWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRG 1414
            LRK+CWEKFGWS+QKADELL+PVLKEYNK ETQLRLEAFYTFNERFAKIRSKRIKKAV+ 
Sbjct: 1105 LRKVCWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKH 1164

Query: 1413 ITGKKSSDLMDESAQDGLRSKKKRRNQ-AVAAGNKSEEACSGQEYADVG-NEAKTTEEVN 1240
            +TG KS +LMD S QD   + KKR  +       K E+   G E A     E KT   V 
Sbjct: 1165 MTGNKSMNLMDASVQDAPGTFKKRELKFNNVEEEKIEDPLMGLESAGADYEETKTKRSVG 1224

Query: 1239 ETEMRNIGSPGRPLH---PGGSGNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPI-- 1075
            +   +  G   +P H   P GSG++    +                        S     
Sbjct: 1225 KQSRKRKGEHLQPEHLEPPEGSGSKQNTNKKSSGGIGGGRKTARSAGKASKKSCSRSFKT 1284

Query: 1074 -NKGGXXXXXXXXXXXSPDDEIYSNSAQGAQVSFGEQ-HQVRRSGRLRKEVKYSEF-NLK 904
             ++GG             D++I     Q +Q+   E+  Q RRS R RK V YSE  +  
Sbjct: 1285 SSEGG------------KDNDI----EQQSQIEKLEKPKQARRSERHRKIVNYSEVRDDD 1328

Query: 903  SDDPDWHDESSREGSGARKESSAD------APEDFGAAVPSIISESENLDREPSWECLEK 742
            SD  D  D  S      R+ES AD       P+D      + +S     +   + E    
Sbjct: 1329 SDKVDKDDGDSTTDKLERRESGADVGIAERCPDDSSNMTENDVSNDYCPEGLSNPETSAD 1388

Query: 741  ADGYGVG-KATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDD-TTDRGLQGSAECLR 568
             D  G   ++  Q +    DD V    LSNEYL +GGGFCL+EDD   +  +  S+  L 
Sbjct: 1389 VDTGGAEMESAVQPSFGEMDDPVPGDLLSNEYLKMGGGFCLEEDDGAMEHEINASSPIL- 1447

Query: 567  KATTFECDASKCSS--LGEDT--SKSPTRTVNPVQVERQGHLDTSYTTKKNP---DDNTN 409
               + EC     SS  LG++   + S     +P     +   D      +N    D+ TN
Sbjct: 1448 ---SVECSDINNSSQLLGDEICGTASNQFVSSPSAKTSKKQCDARIGASENEQDLDNATN 1504

Query: 408  SDRSEVASFQEIISEDDCGEDSSRYFRAMPNL 313
            S   +V+S+QE  +ED+     S + RAMPNL
Sbjct: 1505 STCHKVSSYQE-NTEDNDYVLGSVFLRAMPNL 1535


>ref|XP_009801326.1| PREDICTED: DNA repair protein UVH3 [Nicotiana sylvestris]
          Length = 1543

 Score =  931 bits (2406), Expect = 0.0
 Identities = 607/1350 (44%), Positives = 785/1350 (58%), Gaps = 77/1350 (5%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQAYLKTVAFRREIDEVQKSAAG+G+G
Sbjct: 230  LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKSAAGKGIG 289

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPAN--PSTSAVNDGAL 3778
            GV+T RIASEANREFIFS++F+GDK VL S G+   + + S+    N  P+++  +D A 
Sbjct: 290  GVRTKRIASEANREFIFSSSFTGDKDVLVSAGKDQTRKKPSEVQTENSLPNSATASDAA- 348

Query: 3777 KTKHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIE 3598
             T+ S+V    V EP   F +DVETYLDERG +R+SR+RAMG+RMTRDLQRNLD++KEIE
Sbjct: 349  -TRKSSVLESIVTEPGSAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDMIKEIE 407

Query: 3597 EENVCMTKS-----AIEKSTNCRPDNCSKVIPNLATCYQDSNGMTCVDENNDGRILNAGT 3433
            EE++   K      AI  +    P N S  IP L +   D++G  C +  ++   L +GT
Sbjct: 408  EESLSRNKDFSYVPAINDTAVHSPGNVSDTIPQLNSSNPDNDGKACSNNKSEESELKSGT 467

Query: 3432 SMEISFEDNGQHQLXXXXXXD--LFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDG 3259
            S++ISFEDN  H        D  +FAHLVAGDP MEFS++ S SKKQSLDSAS+ EWE+G
Sbjct: 468  SIQISFEDNFAHNCANDDDDDDDIFAHLVAGDPAMEFSIDHSPSKKQSLDSASDVEWEEG 527

Query: 3258 DIEVEGGTLDNKLKGKP---LLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGA 3088
             IE +   L N  +G+    L  DGM DE ++EWE+   DI +  S F  +     SKGA
Sbjct: 528  LIEEKRDLLSNNSQGESQATLEKDGMDDEVEVEWEEECVDICKERSLFPFDSRS-ASKGA 586

Query: 3087 LEEEADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGKMSQP 2908
            LEEEAD +EA+RRSL+DL D R +D   +++     + +V+ G+  GS     DG+ +  
Sbjct: 587  LEEEADYQEAVRRSLEDLRDHRCIDKSHENDMSEEASQMVTHGIVIGS-----DGQDNNC 641

Query: 2907 PSTFNN-KQHESPCHVQEDTNSPDSNIMETNSSLEVHLTPHLEGNYCTKDLLPEKACRSY 2731
            P T    +Q E P  +Q       +++ +T     VH T   EGN C  + L E+   + 
Sbjct: 642  PKTHEILQQKELPSEIQT------AHLHDT-----VHETDIAEGNNCLGNQLGEQFQANS 690

Query: 2730 SFLDPLMQDISGI--KTSHREVHDAPVQEKDVSQFEVQLAPGTGDGIVADGLHNG----- 2572
             + +  +++++    +T H ++   P    D S  EV++          +   NG     
Sbjct: 691  GYRNMQIEEVTNQADRTLHCDIRMGPTDPLDGS--EVRMIRNKIADTTVEVSSNGKSASD 748

Query: 2571 ----------------------FEAAVGSH--SDRTTNIKEAFLKDLMIDTAQQGIEGEV 2464
                                  +EA   SH  +  +T + +AF +  + D        E 
Sbjct: 749  VTSIEQARFNELPNARTSDAQQYEAGAASHHYTHESTELAKAFTEGFISDANSAQKLDEE 808

Query: 2463 HECREQ---------HLGKAGSS-DXXXXXXXXXXXXXXXXXXXXXXGDKQKKLERNAES 2314
              C +          +L  AGS  D                      GD+Q+KLERNAES
Sbjct: 809  GTCDDPLLEGKDLFGNLDSAGSKEDQKVMMASLEEEMDVLDKEREKLGDEQRKLERNAES 868

Query: 2313 VSSEMFAECQELLQIFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXXXDAFLFGARNVYK 2134
            VSSEMFAECQELLQ+FG+P+IIAPMEAEAQCAYMEL            DAFLFGARNVYK
Sbjct: 869  VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDAFLFGARNVYK 928

Query: 2133 NIFDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPE 1954
            NIFDDRKYVETYFMKD+ENELGL+REKLI  AL LGSDYTEGVSGIGIVNAIEV+NAFPE
Sbjct: 929  NIFDDRKYVETYFMKDVENELGLDREKLIRTALFLGSDYTEGVSGIGIVNAIEVLNAFPE 988

Query: 1953 EDGLRRFREWIESPDPSILGKFDLQAEGSSKKIQSQVGETDMNCSDTKLGGVAACDADIS 1774
            EDGL++FREW+ESPDPSILG  D QA  S++K  S+VG+ DM+CS + + G +A D ++ 
Sbjct: 989  EDGLQKFREWVESPDPSILGGLDAQAGSSTRKRGSEVGDPDMSCSRSNVEGNSASDENVK 1048

Query: 1773 GSVDDTQKLKQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFV 1594
             S D  QKLKQIFMNKHRN+SKNWH+PSSFPSDAVISAY+SP+VDKSTEPF+WGKPD  V
Sbjct: 1049 -SEDRVQKLKQIFMNKHRNISKNWHIPSSFPSDAVISAYASPRVDKSTEPFAWGKPDVSV 1107

Query: 1593 LRKLCWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRG 1414
            LRK+CWEKFGWS+QKADELL+ VLKEYNK ETQLRLEAFYTFNERFAKIRSKRIKKAV+ 
Sbjct: 1108 LRKVCWEKFGWSSQKADELLVSVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKL 1167

Query: 1413 ITGKKSSDLMDESAQDGLRSKKKRRNQ-AVAAGNKSEEACSGQEYADVG-NEAKTTEEVN 1240
            +TG KS +LMD S QD   + KKR  +       K E+  +G E A     E KT   V 
Sbjct: 1168 MTGNKSMNLMDASVQDAPENLKKRELKFNNVEEEKIEDPLTGLESAGADYEETKTKRSVG 1227

Query: 1239 ETEMRNIGSPGRPLH---PGGSGNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINK 1069
            +   +  G   +P H   P GSG++    +                        S     
Sbjct: 1228 KQSRKRKGEHLQPEHLEPPEGSGSKQNTNKKSSGSIRGGRKTARSVGKASKKSCSRSFKT 1287

Query: 1068 GGXXXXXXXXXXXSPDDEIYSNSAQGAQVSFGEQ-HQVRRSGRLRKEVKYSE-FNLKSDD 895
                           + E  S+  Q +Q+   E+  Q RRS R RK V YSE  + +SD 
Sbjct: 1288 SS-------------EGEKDSDIEQQSQIEKLEKPKQARRSERHRKIVNYSEGRDDESDK 1334

Query: 894  PDWHDESSREGSGARKESSAD------APEDFGAAVPSIISES---ENLDREPSWECLEK 742
             D  D  S      R+ES AD       P+D      + +S     + L    +    + 
Sbjct: 1335 VDKDDGDSTTDKLERRESGADVGIVERCPDDSSNMTENDVSNDYCPQGLSNPET--SADV 1392

Query: 741  ADGYGVGKATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDD-TTDRGLQGSAECLRK 565
              G    ++  Q +    DD V    LS EYL +GGGFCL+EDD   +  +  S+  L  
Sbjct: 1393 NTGGAEMESAVQPSFGEMDDPVPGDLLSKEYLKMGGGFCLEEDDGDMEHEINASSPILSV 1452

Query: 564  ATTFECDASK------CSSLGEDTSKSPTRTVNPVQVERQGHLDTSYTTKKNPDDNTNSD 403
              +   ++S+      C +       SP  + N  Q + +     +   +++ D+ TNS 
Sbjct: 1453 GCSDINNSSQLLGNEICGNASNQFVSSP--STNKKQCDAR---IGASENEQDLDNTTNST 1507

Query: 402  RSEVASFQEIISEDDCGEDSSRYFRAMPNL 313
              +V++ QE + ++D     S + RAMPNL
Sbjct: 1508 CQKVSAHQENMEDNDY-VSGSVFLRAMPNL 1536


>ref|XP_010317093.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Solanum lycopersicum]
          Length = 1333

 Score =  902 bits (2330), Expect = 0.0
 Identities = 594/1338 (44%), Positives = 774/1338 (57%), Gaps = 65/1338 (4%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREI EVQK+AAGRG+G
Sbjct: 24   LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIGEVQKAAAGRGIG 83

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GV+TSRIASEANREFIFS++F+GDK VL S GE     + S+    N   +A +D + + 
Sbjct: 84   GVRTSRIASEANREFIFSSSFTGDKDVLASAGEDQTSKKSSEVQTENNLANAASDASTR- 142

Query: 3771 KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIEEE 3592
            K S+V    V EP+  F +DVETYLDERG +R+SR+RAMG+RMTRDLQRNLDLMKEIEEE
Sbjct: 143  KSSSVLESIVSEPETAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDLMKEIEEE 202

Query: 3591 NVCMTKSAIEKSTNCRPDN-----CSKVIPNLATCYQDSNGMTCVDENNDGRILNAGTSM 3427
            NV   K   +  T    D       S  I +L +   D +G  C++  N+   L +GT++
Sbjct: 203  NVSRNKDFSDVPTVSDTDVHTPVIVSDTISHLNSSNPDDDGKACLNNKNEQSELRSGTTI 262

Query: 3426 EISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDGDIEV 3247
            +ISFEDN +H         +FA LVAGDP MEF ++ S SKKQSLDSAS+ EWE+G IE 
Sbjct: 263  QISFEDNFEHDCANDDDD-IFASLVAGDPTMEFLMDHSPSKKQSLDSASDVEWEEGVIEK 321

Query: 3246 EGGTLDNKLKGK---PLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALEEE 3076
            +G  L N  +G+   PL  DGM DE ++EWE+G  DI E       +      KGALEEE
Sbjct: 322  KGDLLSNNSQGERQAPLEIDGMDDEAEVEWEEGCVDICEDPPLLPSDSKSAY-KGALEEE 380

Query: 3075 ADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGKMSQPPSTF 2896
            A+ +EA+RRSL+D+ D R +D   + E       + + G+ S S      G+ +  P+  
Sbjct: 381  ANYQEAVRRSLEDMKDHRYIDKSHEKEMSEEAIQIAAQGISSESF-----GQENYCPTVH 435

Query: 2895 NN-KQHESPCHVQ----EDTNSPDSNIMETNSSLEVHLTPHLEGN-------------YC 2770
               +Q + P  +Q     DT   + +I  +N SL  H+    + N             + 
Sbjct: 436  KILQQKDLPSEIQTADLHDTVH-EMDIAGSNKSLGSHMGEQFQANSGYGNMQIEKANSHA 494

Query: 2769 TKDLLPEKACRSYS-------FLDPLMQ-DISGIKTSHREVHDAPV---------QEKDV 2641
             ++L  EKA    +        ++P +  D S +  + +++ D  V            DV
Sbjct: 495  DRNLQIEKATSHTNRNLHCDIHMEPTIPLDGSEVDMTKKKIADTTVGVSCNNNTQSASDV 554

Query: 2640 SQFEVQLAPGTGDGIVADGLHNGFEAAVGSHSDRTTNIKEAFLKDLMID-TAQQGI--EG 2470
            +  E      + +    D      EAA   ++  TT I +AF +    D  + Q +  EG
Sbjct: 555  TSIEQSTLNESMNARTTDAQEYESEAAAHHYTHETTEITKAFTEGFTTDINSAQNLDEEG 614

Query: 2469 EVHECREQHLGKAGSS----DXXXXXXXXXXXXXXXXXXXXXXGDKQKKLERNAESVSSE 2302
               +   + +G   S+    D                      GD+Q+KLERNAESVSSE
Sbjct: 615  ACDDPLFERIGNLDSASTKEDQKVMMASLEEEMHVLDKEREKLGDEQRKLERNAESVSSE 674

Query: 2301 MFAECQELLQIFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFD 2122
            MFAECQELLQ+FG+P+IIAPMEAEAQCAYMEL            DAFLFGAR+VYKNIFD
Sbjct: 675  MFAECQELLQMFGLPYIIAPMEAEAQCAYMELTDLVDGVVTDDSDAFLFGARSVYKNIFD 734

Query: 2121 DRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL 1942
            DRKYVETYFMKD+E+ELGL+REK+I MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL
Sbjct: 735  DRKYVETYFMKDVESELGLDREKIIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL 794

Query: 1941 RRFREWIESPDPSILGKFDLQAEGSSKKIQSQVGETDMNCSDTKLGGVAACDADISGSVD 1762
            ++FREW+ESPDPSILG  D Q   +S+K   + G+ DM+CS + L G AA       S D
Sbjct: 795  QKFREWVESPDPSILGGLDSQVGSNSRKRGCKGGDPDMSCSTSNLEGNAA-------SED 847

Query: 1761 DTQKLKQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKL 1582
              +K +Q FMNKHRN+SKNWH+PSSFPS+AVISAY+SP+VDKSTEPF+WGKPD  VLRK+
Sbjct: 848  RAEKSRQSFMNKHRNISKNWHIPSSFPSNAVISAYTSPRVDKSTEPFAWGKPDVSVLRKV 907

Query: 1581 CWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGK 1402
            CWEKFGWS+QKADELL+PVLKEYNK ETQLRLEAFY+FNERFAKIRSKRI KAV+ +TG 
Sbjct: 908  CWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRINKAVKYMTGN 967

Query: 1401 KSSDLMDESAQDGLRSKKKRRNQAVAAGNKSEEACSGQEYADVGNEAKTTEEVNETEMRN 1222
            KSSDLMD SAQD     KKR    V + + +EE     E    G+E+   +    T  R+
Sbjct: 968  KSSDLMDGSAQDAPGICKKR---VVKSNDMNEEK---MEDPPRGHESAGADYEETTTKRS 1021

Query: 1221 IGSPGRPLHPGGSGNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXX 1042
            +G   R    GG      +E                         +  + K G       
Sbjct: 1022 VGKQSRK-RKGGHLQTEHLEPPEGAGSKRNTSKKSSGSIGGRKETARSVWKAG--KNSSR 1078

Query: 1041 XXXXSPDDEIYSNSAQGAQVSFGEQ-HQVRRSGRLRKEVKYSEFNLKSDDPDWHDESSRE 865
                S + E  S+  Q +Q+   E+ +Q RRS R RK V YSE   + D+ D  D  S  
Sbjct: 1079 SSKISSEGEKDSDIEQQSQIEKPEKTNQTRRSQRHRKIVNYSE--KRDDESDKDDGDSTA 1136

Query: 864  GSGARKESSADAPEDFGAAVPSIISESENLDREPSW-----ECLEKADGYGVGKATSQLN 700
                R+E+  D   D     P+  S+    D    +       LE   G    ++T+Q  
Sbjct: 1137 EKLERREAGVDV--DVAERYPADSSKMNENDASNDYCPQELPNLETNAGGAEMESTAQPI 1194

Query: 699  SSPADDIVSDTQLSNEYLTVGGGFCLDEDD-TTDRGLQGSAECLRKATTFECDASKCSSL 523
                 D +    LS EYL +GGGFCL+E+D   +  +  S+  L    +   ++S+   L
Sbjct: 1195 FDETYDPIPGDLLSKEYLKMGGGFCLEENDGDMEHEINASSPILSVEGSDIYNSSQL--L 1252

Query: 522  GEDTS--------KSPTRTVNPVQVERQGHLDTSYTTKKNPDDNTNSDRSEVASFQEIIS 367
            G++ +         SP+R  +  Q E    +  S   +++  + TN   ++V+   E + 
Sbjct: 1253 GDENNGNASNQLISSPSRKTSEKQCE--AGIGAS-EIEQDLHNTTNITCNDVSPHLENMG 1309

Query: 366  EDDCGEDSSRYFRAMPNL 313
            ++D    SS + RAMPNL
Sbjct: 1310 KNDY-VSSSVFLRAMPNL 1326


>ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Solanum lycopersicum]
          Length = 1539

 Score =  902 bits (2330), Expect = 0.0
 Identities = 594/1338 (44%), Positives = 774/1338 (57%), Gaps = 65/1338 (4%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREI EVQK+AAGRG+G
Sbjct: 230  LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIGEVQKAAAGRGIG 289

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GV+TSRIASEANREFIFS++F+GDK VL S GE     + S+    N   +A +D + + 
Sbjct: 290  GVRTSRIASEANREFIFSSSFTGDKDVLASAGEDQTSKKSSEVQTENNLANAASDASTR- 348

Query: 3771 KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIEEE 3592
            K S+V    V EP+  F +DVETYLDERG +R+SR+RAMG+RMTRDLQRNLDLMKEIEEE
Sbjct: 349  KSSSVLESIVSEPETAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDLMKEIEEE 408

Query: 3591 NVCMTKSAIEKSTNCRPDN-----CSKVIPNLATCYQDSNGMTCVDENNDGRILNAGTSM 3427
            NV   K   +  T    D       S  I +L +   D +G  C++  N+   L +GT++
Sbjct: 409  NVSRNKDFSDVPTVSDTDVHTPVIVSDTISHLNSSNPDDDGKACLNNKNEQSELRSGTTI 468

Query: 3426 EISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDGDIEV 3247
            +ISFEDN +H         +FA LVAGDP MEF ++ S SKKQSLDSAS+ EWE+G IE 
Sbjct: 469  QISFEDNFEHDCANDDDD-IFASLVAGDPTMEFLMDHSPSKKQSLDSASDVEWEEGVIEK 527

Query: 3246 EGGTLDNKLKGK---PLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALEEE 3076
            +G  L N  +G+   PL  DGM DE ++EWE+G  DI E       +      KGALEEE
Sbjct: 528  KGDLLSNNSQGERQAPLEIDGMDDEAEVEWEEGCVDICEDPPLLPSDSKSAY-KGALEEE 586

Query: 3075 ADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGKMSQPPSTF 2896
            A+ +EA+RRSL+D+ D R +D   + E       + + G+ S S      G+ +  P+  
Sbjct: 587  ANYQEAVRRSLEDMKDHRYIDKSHEKEMSEEAIQIAAQGISSESF-----GQENYCPTVH 641

Query: 2895 NN-KQHESPCHVQ----EDTNSPDSNIMETNSSLEVHLTPHLEGN-------------YC 2770
               +Q + P  +Q     DT   + +I  +N SL  H+    + N             + 
Sbjct: 642  KILQQKDLPSEIQTADLHDTVH-EMDIAGSNKSLGSHMGEQFQANSGYGNMQIEKANSHA 700

Query: 2769 TKDLLPEKACRSYS-------FLDPLMQ-DISGIKTSHREVHDAPV---------QEKDV 2641
             ++L  EKA    +        ++P +  D S +  + +++ D  V            DV
Sbjct: 701  DRNLQIEKATSHTNRNLHCDIHMEPTIPLDGSEVDMTKKKIADTTVGVSCNNNTQSASDV 760

Query: 2640 SQFEVQLAPGTGDGIVADGLHNGFEAAVGSHSDRTTNIKEAFLKDLMID-TAQQGI--EG 2470
            +  E      + +    D      EAA   ++  TT I +AF +    D  + Q +  EG
Sbjct: 761  TSIEQSTLNESMNARTTDAQEYESEAAAHHYTHETTEITKAFTEGFTTDINSAQNLDEEG 820

Query: 2469 EVHECREQHLGKAGSS----DXXXXXXXXXXXXXXXXXXXXXXGDKQKKLERNAESVSSE 2302
               +   + +G   S+    D                      GD+Q+KLERNAESVSSE
Sbjct: 821  ACDDPLFERIGNLDSASTKEDQKVMMASLEEEMHVLDKEREKLGDEQRKLERNAESVSSE 880

Query: 2301 MFAECQELLQIFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFD 2122
            MFAECQELLQ+FG+P+IIAPMEAEAQCAYMEL            DAFLFGAR+VYKNIFD
Sbjct: 881  MFAECQELLQMFGLPYIIAPMEAEAQCAYMELTDLVDGVVTDDSDAFLFGARSVYKNIFD 940

Query: 2121 DRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL 1942
            DRKYVETYFMKD+E+ELGL+REK+I MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL
Sbjct: 941  DRKYVETYFMKDVESELGLDREKIIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL 1000

Query: 1941 RRFREWIESPDPSILGKFDLQAEGSSKKIQSQVGETDMNCSDTKLGGVAACDADISGSVD 1762
            ++FREW+ESPDPSILG  D Q   +S+K   + G+ DM+CS + L G AA       S D
Sbjct: 1001 QKFREWVESPDPSILGGLDSQVGSNSRKRGCKGGDPDMSCSTSNLEGNAA-------SED 1053

Query: 1761 DTQKLKQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKL 1582
              +K +Q FMNKHRN+SKNWH+PSSFPS+AVISAY+SP+VDKSTEPF+WGKPD  VLRK+
Sbjct: 1054 RAEKSRQSFMNKHRNISKNWHIPSSFPSNAVISAYTSPRVDKSTEPFAWGKPDVSVLRKV 1113

Query: 1581 CWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGK 1402
            CWEKFGWS+QKADELL+PVLKEYNK ETQLRLEAFY+FNERFAKIRSKRI KAV+ +TG 
Sbjct: 1114 CWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRINKAVKYMTGN 1173

Query: 1401 KSSDLMDESAQDGLRSKKKRRNQAVAAGNKSEEACSGQEYADVGNEAKTTEEVNETEMRN 1222
            KSSDLMD SAQD     KKR    V + + +EE     E    G+E+   +    T  R+
Sbjct: 1174 KSSDLMDGSAQDAPGICKKR---VVKSNDMNEEK---MEDPPRGHESAGADYEETTTKRS 1227

Query: 1221 IGSPGRPLHPGGSGNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXX 1042
            +G   R    GG      +E                         +  + K G       
Sbjct: 1228 VGKQSRK-RKGGHLQTEHLEPPEGAGSKRNTSKKSSGSIGGRKETARSVWKAG--KNSSR 1284

Query: 1041 XXXXSPDDEIYSNSAQGAQVSFGEQ-HQVRRSGRLRKEVKYSEFNLKSDDPDWHDESSRE 865
                S + E  S+  Q +Q+   E+ +Q RRS R RK V YSE   + D+ D  D  S  
Sbjct: 1285 SSKISSEGEKDSDIEQQSQIEKPEKTNQTRRSQRHRKIVNYSE--KRDDESDKDDGDSTA 1342

Query: 864  GSGARKESSADAPEDFGAAVPSIISESENLDREPSW-----ECLEKADGYGVGKATSQLN 700
                R+E+  D   D     P+  S+    D    +       LE   G    ++T+Q  
Sbjct: 1343 EKLERREAGVDV--DVAERYPADSSKMNENDASNDYCPQELPNLETNAGGAEMESTAQPI 1400

Query: 699  SSPADDIVSDTQLSNEYLTVGGGFCLDEDD-TTDRGLQGSAECLRKATTFECDASKCSSL 523
                 D +    LS EYL +GGGFCL+E+D   +  +  S+  L    +   ++S+   L
Sbjct: 1401 FDETYDPIPGDLLSKEYLKMGGGFCLEENDGDMEHEINASSPILSVEGSDIYNSSQL--L 1458

Query: 522  GEDTS--------KSPTRTVNPVQVERQGHLDTSYTTKKNPDDNTNSDRSEVASFQEIIS 367
            G++ +         SP+R  +  Q E    +  S   +++  + TN   ++V+   E + 
Sbjct: 1459 GDENNGNASNQLISSPSRKTSEKQCE--AGIGAS-EIEQDLHNTTNITCNDVSPHLENMG 1515

Query: 366  EDDCGEDSSRYFRAMPNL 313
            ++D    SS + RAMPNL
Sbjct: 1516 KNDY-VSSSVFLRAMPNL 1532


>ref|XP_006357145.1| PREDICTED: DNA repair protein UVH3-like isoform X1 [Solanum
            tuberosum]
          Length = 1545

 Score =  893 bits (2307), Expect = 0.0
 Identities = 589/1341 (43%), Positives = 756/1341 (56%), Gaps = 68/1341 (5%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREI EVQK+AAGRG+G
Sbjct: 230  LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIGEVQKAAAGRGIG 289

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GV+TSRIASEANREFIFS++F+GDK VL S GE     + S+    N   +A  D + + 
Sbjct: 290  GVRTSRIASEANREFIFSSSFTGDKDVLASAGEDQISKKSSEVQTENNLANAAGDASTR- 348

Query: 3771 KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIEEE 3592
            K S+V    V EP+  F +DVETYLDERG +R+SR+RAMG+RMTRDLQRNLDLMKEIEEE
Sbjct: 349  KSSSVLESIVSEPESAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDLMKEIEEE 408

Query: 3591 NVCMTKSAIEKSTNC-----RPDNCSKVIPNLATCYQDSNGMTCVDENNDGRILNAGTSM 3427
            +V   K   +  T        P N S  I +L +   D +G  C++   +   L +GT++
Sbjct: 409  SVSRNKDFSDVPTVSDTDVHTPGNVSDTILHLNSSNPDDDGKDCLNNKTEESELRSGTTI 468

Query: 3426 EISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDGDIEV 3247
            +ISFEDN +H         +FA LVAGDP MEF ++ S SKKQSLDSAS+ EWE+G IE 
Sbjct: 469  QISFEDNFEHDCANDDDD-IFASLVAGDPGMEFPMDHSPSKKQSLDSASDVEWEEGVIEE 527

Query: 3246 EGGTLDNKLKGK---PLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALEEE 3076
            +G  L +  +G+   PL  DGM DE ++EWE+G  DI E       +      KGALEEE
Sbjct: 528  KGDLLSSNSQGEGQAPLEIDGMDDEAEVEWEEGCLDICEEPPLLPLDSRSAY-KGALEEE 586

Query: 3075 ADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGKMSQPPSTF 2896
            A+ +EA++RSL+D+ D R +D   + E       + + G+   SV     G+ +  P   
Sbjct: 587  ANYQEAVKRSLEDMRDHRYIDKSHEKEMSEEAIQITAQGISIESV-----GQENYCPKVH 641

Query: 2895 NN-KQHESPCHVQ----EDTNSPDSNIMETNSSLEVHLTPHLEGNYCTKDLLPEKACRSY 2731
               +Q + P  +Q     DT   + +I  +N+SL  HL    + N    ++  EKA    
Sbjct: 642  KILQQKDLPSEIQTADLHDTVH-EMDIAGSNNSLGTHLGEQFQANSGYGNMQIEKAT--- 697

Query: 2730 SFLDPLMQDISGIKTSHREVH-------DAPVQEKDVSQFEVQLAPGTGDGIVADGLHNG 2572
            S  D  +Q       ++R +H         P+   +V   +  +A  T  G+ ++   N 
Sbjct: 698  SHPDRNLQIEKATSHTNRNLHCDIHMEPTIPLDGSEVDMIKKTIADTTV-GVSSNNNTNS 756

Query: 2571 -------------------------FEAAVGSH--SDRTTNIKEAFLKDLMIDTAQQGIE 2473
                                     +E+   +H  +  TT + +AF +    D       
Sbjct: 757  ASDVTYIEQSTFNESMNARTTDAQQYESGAAAHHYTQETTELTKAFTEGFTTDINSAQNL 816

Query: 2472 GEVHEC------REQHLGKAGSS-DXXXXXXXXXXXXXXXXXXXXXXGDKQKKLERNAES 2314
             E   C      R  +L  A +  D                      GD+Q+KLERNA+S
Sbjct: 817  DEEGACDDPLFERIDNLDSASTKEDQKVMMASLEEEMHVLDEQREKLGDEQRKLERNADS 876

Query: 2313 VSSEMFAECQELLQIFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXXXDAFLFGARNVYK 2134
            VSSEMFAECQELLQ+FG+P+IIAPMEAEAQCAYMEL            DAFLFGAR+VYK
Sbjct: 877  VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDAFLFGARSVYK 936

Query: 2133 NIFDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPE 1954
            NIFDDRKYVETYFMKD+ENELGL+REK+I MALLLGSDYTEGVSG+GIVNAIEVVNAFPE
Sbjct: 937  NIFDDRKYVETYFMKDVENELGLDREKIIRMALLLGSDYTEGVSGVGIVNAIEVVNAFPE 996

Query: 1953 EDGLRRFREWIESPDPSILGKFDLQAEGSSKKIQSQVGETDMNCSDTKLGGVAACDADIS 1774
            EDGL++FREW+ESPDPSILG  D Q   SS+K   + G+ DM+CS + L G AA      
Sbjct: 997  EDGLQKFREWVESPDPSILGGLDAQTGSSSRKRGCKGGDPDMSCSTSNLEGNAA------ 1050

Query: 1773 GSVDDTQKLKQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFV 1594
             S D  +KL+QIFMNKHRN+SKNWH+PSSFPS+AVISAY+SP+VDKSTEPF+WGKPD  V
Sbjct: 1051 -SEDRAEKLRQIFMNKHRNISKNWHIPSSFPSNAVISAYTSPRVDKSTEPFAWGKPDVSV 1109

Query: 1593 LRKLCWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRG 1414
            LRK+CWEKFGWS+QKADELL+PVLKEYNK ETQLRLEAFY+FNERFAKIRSKRI KAV+ 
Sbjct: 1110 LRKVCWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRINKAVKY 1169

Query: 1413 ITGKKSSDLMDESAQDGLRSKKKRRNQAVAAG-NKSEEACSGQEYADVGNEAKTTEEVNE 1237
            +T  KSSDLMD SAQD   S KKR  ++      K E+   G E A    E  TT+    
Sbjct: 1170 MTVNKSSDLMDGSAQDAPGSCKKRVVKSNDMNEEKMEDPPRGLESAGADYEETTTKR--- 1226

Query: 1236 TEMRNIGSPGRPLHPGGSGNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXX 1057
               R++G   R    GG      +E                         +  + K    
Sbjct: 1227 ---RSVGKQSRK-RKGGLLQTEHLEPPEGAGSKRNTSKKSSGSIGGRKETARSVRKASKK 1282

Query: 1056 XXXXXXXXXSPDDEIYSNSAQGAQVSFGEQHQVRRSGRLRKEVKYSEFNLKSDDPDWHDE 877
                     S  ++      Q       + +Q RRS R RK V YSE   + D+ D  D 
Sbjct: 1283 SSSRSSKTSSEGEKDSDIEQQSQIEKLEKPNQARRSQRHRKIVIYSE--KRDDEFDKDDG 1340

Query: 876  SSREGSGARKESSADAPEDFGAAVPSIISESENLDREPSW-----ECLEKADGYGVGKAT 712
             S      R+ES AD   D     P+  S+    D    +       LE   G   G A 
Sbjct: 1341 DSTTEKLERRESGADV--DIAERYPADSSKMNENDASNDYCPQELPNLETNAGVDAGGAE 1398

Query: 711  SQLNSSPADDIVSD----TQLSNEYLTVGGGFCLDEDD-TTDRGLQGSAECLRKATTFEC 547
             +    P+ D  SD      LS EYL +GGGFCL+E+D   +  +  S+  L    +   
Sbjct: 1399 MESTVQPSFDETSDPIPGDLLSKEYLKMGGGFCLEENDGDMEHEINASSPILSVECSDIY 1458

Query: 546  DASKCSSLGEDTSKSPTRTVNPVQVERQGHLDTSYTTKKNPDD---NTNSDRSEVASFQE 376
            ++S+    G   + S     +P +   +   +      +   D    TN   ++V+   E
Sbjct: 1459 NSSQLFGDGNSGNASNQLVSSPSRKTSEKQCEAGIGASEIEQDLNNTTNITCNDVSPHLE 1518

Query: 375  IISEDDCGEDSSRYFRAMPNL 313
             +  +D    +S + RAMPNL
Sbjct: 1519 NMGNNDY-VSTSVFLRAMPNL 1538


>ref|XP_006357146.1| PREDICTED: DNA repair protein UVH3-like isoform X2 [Solanum
            tuberosum]
          Length = 1517

 Score =  887 bits (2291), Expect = 0.0
 Identities = 583/1332 (43%), Positives = 751/1332 (56%), Gaps = 59/1332 (4%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREI EVQK+AAGRG+G
Sbjct: 230  LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIGEVQKAAAGRGIG 289

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GV+TSRIASEANREFIFS++F+GDK VL S GE     + S+    N   +A  D + + 
Sbjct: 290  GVRTSRIASEANREFIFSSSFTGDKDVLASAGEDQISKKSSEVQTENNLANAAGDASTR- 348

Query: 3771 KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIEEE 3592
            K S+V    V EP+  F +DVETYLDERG +R+SR+RAMG+RMTRDLQRNLDLMKEIEEE
Sbjct: 349  KSSSVLESIVSEPESAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDLMKEIEEE 408

Query: 3591 NVCMTKSAIEKSTNC-----RPDNCSKVIPNLATCYQDSNGMTCVDENNDGRILNAGTSM 3427
            +V   K   +  T        P N S  I +L +   D +G  C++   +   L +GT++
Sbjct: 409  SVSRNKDFSDVPTVSDTDVHTPGNVSDTILHLNSSNPDDDGKDCLNNKTEESELRSGTTI 468

Query: 3426 EISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDGDIEV 3247
            +ISFEDN +H         +FA LVAGDP MEF ++ S SKKQSLDSAS+ EWE+G IE 
Sbjct: 469  QISFEDNFEHDCANDDDD-IFASLVAGDPGMEFPMDHSPSKKQSLDSASDVEWEEGVIEE 527

Query: 3246 EGGTLDNKLKGK---PLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALEEE 3076
            +G  L +  +G+   PL  DGM DE ++EWE+G  DI E       +      KGALEEE
Sbjct: 528  KGDLLSSNSQGEGQAPLEIDGMDDEAEVEWEEGCLDICEEPPLLPLDSRSAY-KGALEEE 586

Query: 3075 ADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGKMSQPPSTF 2896
            A+ +EA++RSL+D+ D R +D   + E       + + G+   SV     G+ +  P   
Sbjct: 587  ANYQEAVKRSLEDMRDHRYIDKSHEKEMSEEAIQITAQGISIESV-----GQENYCPKVH 641

Query: 2895 NN-KQHESPCHVQ----EDTNSPDSNIMETNSSLEVHLTPHLEGNYCTKDLLPEKACRSY 2731
               +Q + P  +Q     DT   + +I  +N+SL  HL    + N    ++  EKA    
Sbjct: 642  KILQQKDLPSEIQTADLHDTVH-EMDIAGSNNSLGTHLGEQFQANSGYGNMQIEKAT--- 697

Query: 2730 SFLDPLMQDISGIKTSHREVH-------DAPVQEKDVSQFEVQLAPGTGDGIVADGLHNG 2572
            S  D  +Q       ++R +H         P+   +V   +  +A  T  G+ ++   N 
Sbjct: 698  SHPDRNLQIEKATSHTNRNLHCDIHMEPTIPLDGSEVDMIKKTIADTTV-GVSSNNNTNS 756

Query: 2571 -------------------------FEAAVGSH--SDRTTNIKEAFLKDLMIDTAQQGIE 2473
                                     +E+   +H  +  TT + +AF +    D       
Sbjct: 757  ASDVTYIEQSTFNESMNARTTDAQQYESGAAAHHYTQETTELTKAFTEGFTTDINSAQNL 816

Query: 2472 GEVHEC------REQHLGKAGSS-DXXXXXXXXXXXXXXXXXXXXXXGDKQKKLERNAES 2314
             E   C      R  +L  A +  D                      GD+Q+KLERNA+S
Sbjct: 817  DEEGACDDPLFERIDNLDSASTKEDQKVMMASLEEEMHVLDEQREKLGDEQRKLERNADS 876

Query: 2313 VSSEMFAECQELLQIFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXXXDAFLFGARNVYK 2134
            VSSEMFAECQELLQ+FG+P+IIAPMEAEAQCAYMEL            DAFLFGAR+VYK
Sbjct: 877  VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDAFLFGARSVYK 936

Query: 2133 NIFDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPE 1954
            NIFDDRKYVETYFMKD+ENELGL+REK+I MALLLGSDYTEGVSG+GIVNAIEVVNAFPE
Sbjct: 937  NIFDDRKYVETYFMKDVENELGLDREKIIRMALLLGSDYTEGVSGVGIVNAIEVVNAFPE 996

Query: 1953 EDGLRRFREWIESPDPSILGKFDLQAEGSSKKIQSQVGETDMNCSDTKLGGVAACDADIS 1774
            EDGL++FREW+ESPDPSILG  D Q   SS+K   + G+ DM+CS + L G AA      
Sbjct: 997  EDGLQKFREWVESPDPSILGGLDAQTGSSSRKRGCKGGDPDMSCSTSNLEGNAA------ 1050

Query: 1773 GSVDDTQKLKQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFV 1594
             S D  +KL+QIFMNKHRN+SKNWH+PSSFPS+AVISAY+SP+VDKSTEPF+WGKPD  V
Sbjct: 1051 -SEDRAEKLRQIFMNKHRNISKNWHIPSSFPSNAVISAYTSPRVDKSTEPFAWGKPDVSV 1109

Query: 1593 LRKLCWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRG 1414
            LRK+CWEKFGWS+QKADELL+PVLKEYNK ETQLRLEAFY+FNERFAKIRSKRI KAV+ 
Sbjct: 1110 LRKVCWEKFGWSSQKADELLVPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRINKAVKY 1169

Query: 1413 ITGKKSSDLMDESAQDGLRSKKKRRNQAVAAG-NKSEEACSGQEYADVGNEAKTTEEVNE 1237
            +T  KSSDLMD SAQD   S KKR  ++      K E+   G E A    E  TT+    
Sbjct: 1170 MTVNKSSDLMDGSAQDAPGSCKKRVVKSNDMNEEKMEDPPRGLESAGADYEETTTKR--- 1226

Query: 1236 TEMRNIGSPGRPLHPGGSGNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXX 1057
               R++G   R    GG      +E                         +  + K    
Sbjct: 1227 ---RSVGKQSRK-RKGGLLQTEHLEPPEGAGSKRNTSKKSSGSIGGRKETARSVRKASKK 1282

Query: 1056 XXXXXXXXXSPDDEIYSNSAQGAQVSFGEQHQVRRSGRLRKEVKYSEFNLKSDDPDWHDE 877
                     S  ++      Q       + +Q RRS R RK V YSE   + D+ D  D 
Sbjct: 1283 SSSRSSKTSSEGEKDSDIEQQSQIEKLEKPNQARRSQRHRKIVIYSE--KRDDEFDKDDG 1340

Query: 876  SSREGSGARKESSADAPEDFGAAVPSIISESENLDREPSWECLEKADGYGVGKATSQLNS 697
             S      R+ES AD   D     P+  S +E                    ++T Q + 
Sbjct: 1341 DSTTEKLERRESGADV--DIAERYPADSSGAEM-------------------ESTVQPSF 1379

Query: 696  SPADDIVSDTQLSNEYLTVGGGFCLDEDD-TTDRGLQGSAECLRKATTFECDASKCSSLG 520
                D +    LS EYL +GGGFCL+E+D   +  +  S+  L    +   ++S+    G
Sbjct: 1380 DETSDPIPGDLLSKEYLKMGGGFCLEENDGDMEHEINASSPILSVECSDIYNSSQLFGDG 1439

Query: 519  EDTSKSPTRTVNPVQVERQGHLDTSYTTKKNPDD---NTNSDRSEVASFQEIISEDDCGE 349
               + S     +P +   +   +      +   D    TN   ++V+   E +  +D   
Sbjct: 1440 NSGNASNQLVSSPSRKTSEKQCEAGIGASEIEQDLNNTTNITCNDVSPHLENMGNNDY-V 1498

Query: 348  DSSRYFRAMPNL 313
             +S + RAMPNL
Sbjct: 1499 STSVFLRAMPNL 1510


>ref|XP_011098511.1| PREDICTED: DNA repair protein UVH3 [Sesamum indicum]
          Length = 1522

 Score =  876 bits (2263), Expect = 0.0
 Identities = 591/1328 (44%), Positives = 765/1328 (57%), Gaps = 55/1328 (4%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLLVQMRERLMAENRQKYQ+VKKAPARFSELQIQAYLKTVAFRREID VQKSAAGRG+G
Sbjct: 237  LDLLVQMRERLMAENRQKYQKVKKAPARFSELQIQAYLKTVAFRREIDGVQKSAAGRGIG 296

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASE+ REFIFS++F+GDKQ LTS G+    ++QSQ  P N ST AVN+  L T
Sbjct: 297  GVQTSRIASESKREFIFSSSFTGDKQALTSVGQEVVGADQSQPEPVNCSTDAVNE-ILST 355

Query: 3771 KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIEEE 3592
              S   G TV E ++ F +DVETYLDERGRVR+SRVRA+GIRMTRDLQRNLDLMKEI++E
Sbjct: 356  --SGAVGPTVVETEKAFHDDVETYLDERGRVRVSRVRALGIRMTRDLQRNLDLMKEIDQE 413

Query: 3591 NVCMTKSAIEKSTNCRP----DNCSKVIPNLATCYQDSNGMTC-VDENNDGRILNAGTSM 3427
                 +   ++ST        +  S  I +     + +N M   +D+ ++  ++N GTS+
Sbjct: 414  KADTDQEKNKESTTAELVDDLERSSDRIQHREVSDKINNRMNDEIDKTDEPAVVN-GTSI 472

Query: 3426 EISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLD-SASEPEWEDGDIE 3250
            EISFED   ++        LFA LVAG+PVM+F+V+ S S KQ+ D SAS+ EWE+G IE
Sbjct: 473  EISFEDTLDNECDNDDDK-LFASLVAGNPVMDFAVDNSASVKQTSDHSASDFEWEEGVIE 531

Query: 3249 VEGGTLDNKLKGKPLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALEEEAD 3070
             +        +   L   GM  E ++EWE+   DIQ  +SS   E    V KGAL+EE+D
Sbjct: 532  EK--------RSAYLFEGGMRGEGEVEWEEEVQDIQLKSSSCPDESQKTVRKGALQEESD 583

Query: 3069 LKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSL----------GMDSGSVHKEVDGK 2920
            ++EAIRRSL+D    R ++   ++  C     VV+            +  G    EVD  
Sbjct: 584  IQEAIRRSLEDTRGCRSMNNFHENSICERGREVVTKEHMTHACQVQSVYEGKEGPEVDAS 643

Query: 2919 MSQPPSTFNNKQH-ESPCHVQEDTNSPDSNIMETNSSLEVHLTPH---LEGNYC-----T 2767
            M      F +    E+ C   E  ++   ++    SSL++ L+     + GN       T
Sbjct: 644  MINVRQPFGSSNILENNC--SEAKSAAFMDLKHEKSSLDLKLSSEDAGISGNLTGEKLVT 701

Query: 2766 KDLLPEK---ACRSYSFLDPLMQDISGIKTSHREVHDAPVQEKDVSQFEV-----QLAPG 2611
             D +PE+          +D   +D +    +  E   + +   +VS         +L   
Sbjct: 702  PDTIPEEEELCVTEKQPIDTCSEDGNSHAANKLEDTCSGLAAHNVSGSAFSSVIHELNDR 761

Query: 2610 TGDGIVADGLHNGFEAAVGSHSDRTTNIKEAFLKDLMIDT------AQQGIEGEVHECRE 2449
              D   AD  H  F+AA   H+  T  I +    D + D        ++ I G     +E
Sbjct: 762  ALDSGSADAQHM-FQAASDDHACDTAKIGKISTDDSITDLDGVKDLGKEKIYGNFSMEKE 820

Query: 2448 QHLGKAGSSDXXXXXXXXXXXXXXXXXXXXXXGDK----QKKLERNAESVSSEMFAECQE 2281
            +    +   D                       ++    Q+KLERNAESVS+EMFAECQE
Sbjct: 821  ETTRNSSFMDDDKEQEIMEAHLEEEMLFLGIEREELGSEQRKLERNAESVSNEMFAECQE 880

Query: 2280 LLQIFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFDDRKYVET 2101
            LLQ+FGIP+IIAPMEAEAQCA+ME             DAFLFGAR+VYKNIFDDRKYVET
Sbjct: 881  LLQMFGIPYIIAPMEAEAQCAFMEQSNLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVET 940

Query: 2100 YFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLRRFREWI 1921
            Y MKDIENELGL+REKLIHMALLLGSDYTEG+SGIGIVNAIEVVNAFP++DGLR FREWI
Sbjct: 941  YLMKDIENELGLDREKLIHMALLLGSDYTEGISGIGIVNAIEVVNAFPKKDGLREFREWI 1000

Query: 1920 ESPDPSILGKFDLQAEGSSKKIQSQVGETDMNCSDTKLGGVAACDADISGSVDDTQKLKQ 1741
            ESPDP+ILGK D++A G+S++  S+  E+ M  S +   G  +CD      VD+ +++KQ
Sbjct: 1001 ESPDPTILGKLDVEAGGNSRRKGSKGSESMMGGSSSNTEG-RSCDQSEPQPVDEAKRIKQ 1059

Query: 1740 IFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKLCWEKFGW 1561
            IFM+KHRNVSKNWH+P++FPSDAVI AY+SPQVDKST+PFSWGKPD FVLRKLCWEKFGW
Sbjct: 1060 IFMDKHRNVSKNWHIPATFPSDAVILAYASPQVDKSTDPFSWGKPDLFVLRKLCWEKFGW 1119

Query: 1560 STQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGKKSSDLMD 1381
               K+DELLLPVLKEYNK ETQLRLEAFYTFNERFAKIRSKRIKKAV+GITG+KSSDLMD
Sbjct: 1120 GMSKSDELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGEKSSDLMD 1179

Query: 1380 ESA-QDGLRSKKKRRNQAVAAGNKSEEACSGQEYADVGNEAKTTEEVNETEMRNIGSPGR 1204
            ++  Q G   K+K R     + N++ ++  G E  D    +  T  + +T +R +   G 
Sbjct: 1180 DTTPQSGSGKKRKVR----PSENEANQSGGGSEGLDGCGTSDNT--IKKTTVRRL--KGG 1231

Query: 1203 PLHPGGSGNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXXXXXXSP 1024
                  S   L +  N                      R    + G              
Sbjct: 1232 QTKEKTSRRNLELSTNVDNHLLTRKESHIRGHLSGKGRRKQRNSSG-------EDTETGS 1284

Query: 1023 DDEIYSNSAQGAQVSFG-EQHQVRRSGRLRKEVKYSEFNLKSDDPDWHDESSREGSGARK 847
            DD  YS S +  Q+    E  QVRRSGR+RK V Y+  ++  D+ +    +  E     K
Sbjct: 1285 DDGTYSGSDKEKQLDISKESFQVRRSGRIRKTVNYTVADV-FDNCEEESPNCLEEGAVTK 1343

Query: 846  ESSADAPEDFGAAVPSIISESE--NLDREPSWECLEKADGYG--VGKATSQLNSSPADDI 679
            ES  D  +  G+   S ++E +  N     S  C+++ +         TSQ + S  DD 
Sbjct: 1344 ESLMD--QVVGSVDKSNVNEHKEGNDVGMGSRLCVDETEQASRMDEMRTSQFSDSQIDDP 1401

Query: 678  VSDTQLSNEYLTVGGGFCLDEDDTTDRGLQGSAECLRKATTFECD--ASKCSSLGEDTSK 505
            V+ + LS +YL  GGGFC++ED+  +  L G A C  K    E         S  E+  +
Sbjct: 1402 VNQSHLSKDYLQFGGGFCMEEDEEVE--LNGHASCPPKEVIPEKPDVLDSVDSAVEENHE 1459

Query: 504  SPTRTVNPVQVERQGHLDTSYT----TKKNPDDNTNSDRSEVASFQEIISEDDCGEDSSR 337
            S    + P  +   G  ++S T      K P D+ +SD           +++D G    +
Sbjct: 1460 SDRSIITP--IPSYGKTESSDTEVIMADKRPSDDISSDG----------TKNDPGSSLPK 1507

Query: 336  YFRAMPNL 313
              RAMPNL
Sbjct: 1508 SLRAMPNL 1515


>ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Vitis vinifera]
          Length = 1343

 Score =  850 bits (2195), Expect = 0.0
 Identities = 568/1349 (42%), Positives = 750/1349 (55%), Gaps = 76/1349 (5%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLLVQMRE+LMAENRQKYQ+VKKAPA FSELQIQAYLKTVAFRREIDEVQKSAAGRGVG
Sbjct: 56   LDLLVQMREKLMAENRQKYQKVKKAPAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 115

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANRE+IFS++F+GDK+ LT+ G      +Q Q     P  S  N+ A  +
Sbjct: 116  GVQTSRIASEANREYIFSSSFTGDKEALTNGGVEKNGDKQYQIPTECPPDSP-NNVASTS 174

Query: 3771 KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIEEE 3592
            K +  A     EP   F +DVETYLDERGRVR+SRVRAMGIRMTRDLQRNLDLMKEIE++
Sbjct: 175  KSNTAAESVAGEPASVFNDDVETYLDERGRVRVSRVRAMGIRMTRDLQRNLDLMKEIEQD 234

Query: 3591 NVCMTKSAIEKSTNCRPDNCSKVIPNLATCYQDSNGMTCVDENNDGRILNAGTSMEISFE 3412
                        TN                 +D+NG+  +++ N+  I + G S+EISFE
Sbjct: 235  R-----------TN-----------------EDNNGIVTLNKTNEQSIPDNGASIEISFE 266

Query: 3411 DNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDGDIEVEGGT- 3235
            D+G+H         LFA LVAG+PV+  S + +LS ++  DSAS+ +WE+G IE +GG+ 
Sbjct: 267  DDGEHNCLNGDDE-LFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEGIIEEKGGSC 325

Query: 3234 LDNK-LKGKP-LLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALEEEADLKE 3061
            +DN  ++ KP ++ + + D++++EWE+G  D+ +  S+   +  +  SKG LEEE DL+E
Sbjct: 326  IDNVGVEIKPSVMEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQE 385

Query: 3060 AIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGKMSQPPSTFNNKQH 2881
            AIRRSL+DL  ++ V    +D         V    D  + HK+ D      P     +Q+
Sbjct: 386  AIRRSLEDLGGEKAVGESFKDSDIKEYDEKVHEVKDD-AFHKKNDKAEQDFPLENLPEQN 444

Query: 2880 ESPCHVQEDTNSPDS-NIMETNSSLEV---HLTPHLEGNYCTKDLLPEKACRSYSFLDPL 2713
             S C + +     DS + M T+ S++     LT  LE N    ++L  + C  Y      
Sbjct: 445  GSFCKIVDVVEKLDSVDGMNTSQSIDASGRQLTSLLEDNPHKMEVLNNELCEEYQ----- 499

Query: 2712 MQDISGIKTSHREVHDAPVQEKDVSQFE---------VQLAPGTG------------DGI 2596
             +D+       RE ++  +  + +S                 G G            D  
Sbjct: 500  -KDVGESGNVGRETNEVYMIREQLSHASKKSVDTSTLANSCSGDGSHISDAMLGNMPDAT 558

Query: 2595 VADGLHNGFEAAVGSHSDRTTNIK----EAFLKDLMIDTAQQGIEGEVHEC----REQHL 2440
             AD      EAA   HS+ TT+      E  +K       Q+  EG  H      +E+++
Sbjct: 559  PADSSKYDSEAAPTWHSNETTDPAIPPGETCIKGKTA-VEQKLAEGNNHVNFFMEKERNM 617

Query: 2439 GKAGSSDXXXXXXXXXXXXXXXXXXXXXXG----DKQKKLERNAESVSSEMFAECQELLQ 2272
            G + + D                           D+Q+KLERNA+ VSSEMFAECQELLQ
Sbjct: 618  GNSVTEDKKNVQFGVTEDVLEEMMILDQECLNLGDEQRKLERNADCVSSEMFAECQELLQ 677

Query: 2271 IFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFDDRKYVETYFM 2092
            +FG+P+IIAPMEAEAQCAYMEL            D FLFGAR+VYKNIFD+RKYVETYFM
Sbjct: 678  MFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDERKYVETYFM 737

Query: 2091 KDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLRRFREWIESP 1912
            KDIE ELGLNREK+I MALLLGSDYTEGVSGIGIVNAIEV+N+FPEEDGL +FREW+ESP
Sbjct: 738  KDIETELGLNREKVIRMALLLGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKFREWVESP 797

Query: 1911 DPSILGKFDLQAEGSSKKIQSQVGETDMNCSDTKLGGVAACDADIS-----GSVDDTQKL 1747
            DP+ILGK +++   SS+K  S+VG  D + S   +    A D ++S      SVDD Q  
Sbjct: 798  DPNILGKVNVETGSSSRKRGSKVGSGDQSHSKNNMD---AFDENVSQNEHNESVDDIQSG 854

Query: 1746 KQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKLCWEKF 1567
            KQIFM+KHRNVSKNWH+PSSFPS+ VISAY+SPQVD+STEPFSWGKPD FVLRKLC EKF
Sbjct: 855  KQIFMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQSTEPFSWGKPDLFVLRKLCLEKF 914

Query: 1566 GWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGKKSSDL 1387
            GW  QKADELLLPVLKEYNK ETQLRLEAFYTFNERFAKIRSKRIKKAV+GITG ++S+L
Sbjct: 915  GWGNQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQTSEL 974

Query: 1386 MDESAQDGLRSKKKRRNQAVAAGNKSEEACS--GQEYADVGNEAKTTEEVNETEMRNIGS 1213
            +D++ Q+G +  K+ +       NK E   +  G   A  G+ A       ++  R I  
Sbjct: 975  LDDAVQEGSKRGKRSKESPSKLDNKQEIPINEIGSTAARNGSNATAKTTPKQSRRRRI-- 1032

Query: 1212 PGRPLHPGGSGNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXXXXX 1033
              +P+   G     P++   +                          +G           
Sbjct: 1033 -RKPVPSDGESAEPPVQAGQKQCNDTGSSKNGRGKGRKK-------GRGVRRGRGRSRIQ 1084

Query: 1032 XSPDDEIYSNSAQGAQVSFGEQ---------HQVRRSGRLRKEVKYSEFNLKSDDP---- 892
             +P  EI   S+        E+         ++VRRS R RK V Y+  +L+ DD     
Sbjct: 1085 ENPGSEISGTSSSDCNSGNEEEVPAQKLDGSNEVRRSKRPRKAVNYANDDLEIDDEGKSL 1144

Query: 891  DWHDESSREGSGARKESS------ADAPEDFGAAVPSIISESENLDREPSWE-CLEKADG 733
            D  ++          E S       DA  DF        ++ +  D  P  + C +  + 
Sbjct: 1145 DQGNQKCTNEEAVELEPSRDQIICGDAAADFSGK-----NQQKAEDSSPGEDLCGDYPET 1199

Query: 732  YGV----GKATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDDTTDRGLQGSAECLRK 565
             GV         QL+S   D   +D + S +YL +GGGFC++ED+               
Sbjct: 1200 EGVMCMDENEIGQLDSRDDDPTFAD-EFSEDYLKMGGGFCVEEDEKDKD---------HN 1249

Query: 564  ATTFECDASKCSSLGEDTSKSPTRTVNPVQ-----VERQGHLDTSYTTKKNPDDNTNSDR 400
            A T+  D +K  ++ E+        ++P +         G   +  T + + + N +   
Sbjct: 1250 ARTY--DPAKADTIYENPDPESELAIHPAESVSSLQNTAGGFQSEPTCQPDTELNLDCPN 1307

Query: 399  SEVASFQEIISEDDCGEDSSRYFRAMPNL 313
            + +       + DD G ++ +  RAMP L
Sbjct: 1308 ATIGLSMPENTGDDTGTNTVKALRAMPFL 1336


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Vitis vinifera]
          Length = 1513

 Score =  850 bits (2195), Expect = 0.0
 Identities = 568/1349 (42%), Positives = 750/1349 (55%), Gaps = 76/1349 (5%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLLVQMRE+LMAENRQKYQ+VKKAPA FSELQIQAYLKTVAFRREIDEVQKSAAGRGVG
Sbjct: 226  LDLLVQMREKLMAENRQKYQKVKKAPAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 285

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANRE+IFS++F+GDK+ LT+ G      +Q Q     P  S  N+ A  +
Sbjct: 286  GVQTSRIASEANREYIFSSSFTGDKEALTNGGVEKNGDKQYQIPTECPPDSP-NNVASTS 344

Query: 3771 KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIEEE 3592
            K +  A     EP   F +DVETYLDERGRVR+SRVRAMGIRMTRDLQRNLDLMKEIE++
Sbjct: 345  KSNTAAESVAGEPASVFNDDVETYLDERGRVRVSRVRAMGIRMTRDLQRNLDLMKEIEQD 404

Query: 3591 NVCMTKSAIEKSTNCRPDNCSKVIPNLATCYQDSNGMTCVDENNDGRILNAGTSMEISFE 3412
                        TN                 +D+NG+  +++ N+  I + G S+EISFE
Sbjct: 405  R-----------TN-----------------EDNNGIVTLNKTNEQSIPDNGASIEISFE 436

Query: 3411 DNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDGDIEVEGGT- 3235
            D+G+H         LFA LVAG+PV+  S + +LS ++  DSAS+ +WE+G IE +GG+ 
Sbjct: 437  DDGEHNCLNGDDE-LFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEGIIEEKGGSC 495

Query: 3234 LDNK-LKGKP-LLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALEEEADLKE 3061
            +DN  ++ KP ++ + + D++++EWE+G  D+ +  S+   +  +  SKG LEEE DL+E
Sbjct: 496  IDNVGVEIKPSVMEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQE 555

Query: 3060 AIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGKMSQPPSTFNNKQH 2881
            AIRRSL+DL  ++ V    +D         V    D  + HK+ D      P     +Q+
Sbjct: 556  AIRRSLEDLGGEKAVGESFKDSDIKEYDEKVHEVKDD-AFHKKNDKAEQDFPLENLPEQN 614

Query: 2880 ESPCHVQEDTNSPDS-NIMETNSSLEV---HLTPHLEGNYCTKDLLPEKACRSYSFLDPL 2713
             S C + +     DS + M T+ S++     LT  LE N    ++L  + C  Y      
Sbjct: 615  GSFCKIVDVVEKLDSVDGMNTSQSIDASGRQLTSLLEDNPHKMEVLNNELCEEYQ----- 669

Query: 2712 MQDISGIKTSHREVHDAPVQEKDVSQFE---------VQLAPGTG------------DGI 2596
             +D+       RE ++  +  + +S                 G G            D  
Sbjct: 670  -KDVGESGNVGRETNEVYMIREQLSHASKKSVDTSTLANSCSGDGSHISDAMLGNMPDAT 728

Query: 2595 VADGLHNGFEAAVGSHSDRTTNIK----EAFLKDLMIDTAQQGIEGEVHEC----REQHL 2440
             AD      EAA   HS+ TT+      E  +K       Q+  EG  H      +E+++
Sbjct: 729  PADSSKYDSEAAPTWHSNETTDPAIPPGETCIKGKTA-VEQKLAEGNNHVNFFMEKERNM 787

Query: 2439 GKAGSSDXXXXXXXXXXXXXXXXXXXXXXG----DKQKKLERNAESVSSEMFAECQELLQ 2272
            G + + D                           D+Q+KLERNA+ VSSEMFAECQELLQ
Sbjct: 788  GNSVTEDKKNVQFGVTEDVLEEMMILDQECLNLGDEQRKLERNADCVSSEMFAECQELLQ 847

Query: 2271 IFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFDDRKYVETYFM 2092
            +FG+P+IIAPMEAEAQCAYMEL            D FLFGAR+VYKNIFD+RKYVETYFM
Sbjct: 848  MFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDERKYVETYFM 907

Query: 2091 KDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLRRFREWIESP 1912
            KDIE ELGLNREK+I MALLLGSDYTEGVSGIGIVNAIEV+N+FPEEDGL +FREW+ESP
Sbjct: 908  KDIETELGLNREKVIRMALLLGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKFREWVESP 967

Query: 1911 DPSILGKFDLQAEGSSKKIQSQVGETDMNCSDTKLGGVAACDADIS-----GSVDDTQKL 1747
            DP+ILGK +++   SS+K  S+VG  D + S   +    A D ++S      SVDD Q  
Sbjct: 968  DPNILGKVNVETGSSSRKRGSKVGSGDQSHSKNNMD---AFDENVSQNEHNESVDDIQSG 1024

Query: 1746 KQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKLCWEKF 1567
            KQIFM+KHRNVSKNWH+PSSFPS+ VISAY+SPQVD+STEPFSWGKPD FVLRKLC EKF
Sbjct: 1025 KQIFMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQSTEPFSWGKPDLFVLRKLCLEKF 1084

Query: 1566 GWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGKKSSDL 1387
            GW  QKADELLLPVLKEYNK ETQLRLEAFYTFNERFAKIRSKRIKKAV+GITG ++S+L
Sbjct: 1085 GWGNQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQTSEL 1144

Query: 1386 MDESAQDGLRSKKKRRNQAVAAGNKSEEACS--GQEYADVGNEAKTTEEVNETEMRNIGS 1213
            +D++ Q+G +  K+ +       NK E   +  G   A  G+ A       ++  R I  
Sbjct: 1145 LDDAVQEGSKRGKRSKESPSKLDNKQEIPINEIGSTAARNGSNATAKTTPKQSRRRRI-- 1202

Query: 1212 PGRPLHPGGSGNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXXXXX 1033
              +P+   G     P++   +                          +G           
Sbjct: 1203 -RKPVPSDGESAEPPVQAGQKQCNDTGSSKNGRGKGRKK-------GRGVRRGRGRSRIQ 1254

Query: 1032 XSPDDEIYSNSAQGAQVSFGEQ---------HQVRRSGRLRKEVKYSEFNLKSDDP---- 892
             +P  EI   S+        E+         ++VRRS R RK V Y+  +L+ DD     
Sbjct: 1255 ENPGSEISGTSSSDCNSGNEEEVPAQKLDGSNEVRRSKRPRKAVNYANDDLEIDDEGKSL 1314

Query: 891  DWHDESSREGSGARKESS------ADAPEDFGAAVPSIISESENLDREPSWE-CLEKADG 733
            D  ++          E S       DA  DF        ++ +  D  P  + C +  + 
Sbjct: 1315 DQGNQKCTNEEAVELEPSRDQIICGDAAADFSGK-----NQQKAEDSSPGEDLCGDYPET 1369

Query: 732  YGV----GKATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDDTTDRGLQGSAECLRK 565
             GV         QL+S   D   +D + S +YL +GGGFC++ED+               
Sbjct: 1370 EGVMCMDENEIGQLDSRDDDPTFAD-EFSEDYLKMGGGFCVEEDEKDKD---------HN 1419

Query: 564  ATTFECDASKCSSLGEDTSKSPTRTVNPVQ-----VERQGHLDTSYTTKKNPDDNTNSDR 400
            A T+  D +K  ++ E+        ++P +         G   +  T + + + N +   
Sbjct: 1420 ARTY--DPAKADTIYENPDPESELAIHPAESVSSLQNTAGGFQSEPTCQPDTELNLDCPN 1477

Query: 399  SEVASFQEIISEDDCGEDSSRYFRAMPNL 313
            + +       + DD G ++ +  RAMP L
Sbjct: 1478 ATIGLSMPENTGDDTGTNTVKALRAMPFL 1506


>ref|XP_012081974.1| PREDICTED: DNA repair protein UVH3 [Jatropha curcas]
          Length = 1706

 Score =  830 bits (2145), Expect = 0.0
 Identities = 542/1299 (41%), Positives = 733/1299 (56%), Gaps = 83/1299 (6%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLLVQMRERLMAENRQ+YQ+VKKAP +FSELQI+AYLKTVAFRREID+VQK+A+G+GV 
Sbjct: 359  LDLLVQMRERLMAENRQRYQKVKKAPEKFSELQIEAYLKTVAFRREIDQVQKAASGKGVS 418

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANREFIFS++F+GDKQ+LTS G     +EQ Q +  + S+ ++      +
Sbjct: 419  GVQTSRIASEANREFIFSSSFTGDKQLLTSAGVYRNGNEQQQRSIGHSSSDSLAHVLSTS 478

Query: 3771 KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIEEE 3592
            K + V G    E ++  + DVETYLDERG +R+SRVRAMG+RMTRDLQRNLDLMKEIE E
Sbjct: 479  KSNTVTGLVPHESRQVIDEDVETYLDERGHIRVSRVRAMGMRMTRDLQRNLDLMKEIEHE 538

Query: 3591 NVCMTKSAIEKSTNCR-----PDNCSKVIPNLATCYQDSNGMTCVDENNDGRILNAGTSM 3427
                 K+A  +S   R     P      I ++ +   ++     ++E N   ILN    +
Sbjct: 539  RTHANKNASAQSEVNRDNIGYPKRIPSKIQHVKSSNDNNGDSVKLNERNAESILNNKGLL 598

Query: 3426 EISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDGDIEV 3247
            EISFE +G+ +       ++F  LVAG PV   SV+    +++S DS S+ +WE+G IEV
Sbjct: 599  EISFEVDGESK-SLGSDDEIFTSLVAGKPVTISSVDNGTLRRESSDSVSDSDWEEGIIEV 657

Query: 3246 EGGTLDNKLKGKPLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALEEEADL 3067
             G   + +    P     +G ++++EWE+G  D++    S   E   + SKG LEE+ADL
Sbjct: 658  RGNNYELE-SNPPPKGSNIGSDSEVEWEEGVCDVEN--FSLPSESGKLASKGYLEEQADL 714

Query: 3066 KEAIRRSLQDLDDQRLVDTPDQDEK--CGATTAVVSLG-MDSGS-------VHKEVDGKM 2917
            +EAIRRSL+D  D++      + EK  C    A   +G +DS         + K+ + + 
Sbjct: 715  QEAIRRSLEDFGDEKFNHALSEHEKQTCSEENAFSGVGFLDSEDNTCRPILLEKDANQQN 774

Query: 2916 SQPPSTFNNKQHESPCHVQ--------------EDTNSPDS-NIMETNSSL--------E 2806
               P    + + +S   +                + + PD  +I++  S +        +
Sbjct: 775  KHSPEILTSAKLDSMDQIDVSHVFSSSGRQLKLSEVHDPDKMSILQIKSCVRDLGSNTAQ 834

Query: 2805 VHLTPHLEGNYC-----TKDLLPEKACRSYSFL----DPLMQDI-----SGIKTSHREVH 2668
                  + GN+C      + + P KA  ++  +    D L+QD+     S I ++H    
Sbjct: 835  SSQDASIGGNFCRGMRSAESVAPLKAKEAHMTVELSSDTLVQDVGLSTSSNISSAHGSHV 894

Query: 2667 DAPVQEKDV---------SQFEVQLAPGTGDGIVADGLHNGFEAAVGSHSDRTTNIKEAF 2515
              P+  K           ++ E +++    +    D L +  E A  S S    +   A 
Sbjct: 895  CKPISGKGAQNILTDDLGNKMEEEISMLVNEEQKTDPLVHSAEIANSSMSSMEPSKDSAV 954

Query: 2514 LKDLMIDTA-QQGIEGEVHECREQHLGKAGSSDXXXXXXXXXXXXXXXXXXXXXXGDKQK 2338
              D+  + A  +  + + +E      G+  +                        GD+ K
Sbjct: 955  GTDVEPNLAGDKNSDNQFNENCMDKFGRNENLQADFAEASLQEEIFILGQERINLGDEWK 1014

Query: 2337 KLERNAESVSSEMFAECQELLQIFGIPFIIAPMEAEAQCAYMELXXXXXXXXXXXXDAFL 2158
            KLERNAESV+SEMFAECQELLQ+FG+P+IIAPMEAEAQCAYMEL            D FL
Sbjct: 1015 KLERNAESVNSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 1074

Query: 2157 FGARNVYKNIFDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAI 1978
            FGARNVYKNIFDDRKYVETYFMKDIE ELGLNREKLI MALLLGSDYTEG+SGIGIVNAI
Sbjct: 1075 FGARNVYKNIFDDRKYVETYFMKDIEKELGLNREKLIRMALLLGSDYTEGISGIGIVNAI 1134

Query: 1977 EVVNAFPEEDGLRRFREWIESPDPSILGKFDLQAEGSSKKIQSQVGETDMNCSDTKLGGV 1798
            EVVNAFPEEDGL++FREWIESPDP+IL KF  Q   S ++  S+VG++D NC+ +  G V
Sbjct: 1135 EVVNAFPEEDGLKKFREWIESPDPTILEKFVRQNGSSMRRKGSKVGDSDSNCATSNTGEV 1194

Query: 1797 AACDADI------SGSVDDTQKLKQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDK 1636
             +   +I        S D+TQ++++IFM  HRNVSKNWH+PSSFPSDAV+SAYSSPQVDK
Sbjct: 1195 NSFGQNIPQVHEQEQSEDNTQEIQRIFMVNHRNVSKNWHIPSSFPSDAVLSAYSSPQVDK 1254

Query: 1635 STEPFSWGKPDHFVLRKLCWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERF 1456
            STEPF+WGKPD  VLRKLCWEKFGW  QK+DELLLPVLKEYNKRETQLR+EAFY+FNERF
Sbjct: 1255 STEPFTWGKPDIQVLRKLCWEKFGWGIQKSDELLLPVLKEYNKRETQLRMEAFYSFNERF 1314

Query: 1455 AKIRSKRIKKAVRGITGKKSSDLMDESAQDGLRSKKKRRNQAVAAGNKSEEACSGQEYAD 1276
            AKIRSKRIKKA++GITG + S+LM+ + ++  RS++KR      +G+   E  S +    
Sbjct: 1315 AKIRSKRIKKALKGITGNQFSELMENAVEENSRSREKRTVMPDESGDCKTERPSKRAKGG 1374

Query: 1275 VGNEAKTTEEVNETEMRNIGSPGRPLHPGGSGNRLPIEENFQXXXXXXXXXXXXXXXXXX 1096
            + N+   + E + T+     + G P+      N+    E  +                  
Sbjct: 1375 IHNDKNNSLEKSATKRSRKSTVGEPV-LSEVKNQGEQAEGRKSTHKGSHGGGRGKGRGRG 1433

Query: 1095 XXRSLPINKG----GXXXXXXXXXXXSPDDEIYSNSAQGAQVSFGEQHQVRRSGRLRKEV 928
              R     +G    G           +  D+   N  Q ++ S G    +RRS R RK V
Sbjct: 1434 CGRGRGRGRGKGDLGFEQSNSSSDDFTDGDDKLENHVQKSEESQG----LRRSMRSRKPV 1489

Query: 927  KYSEFNLKSDDPDWHDESSREGSGARKESSADAPEDFGAA-----VPSIISESENLDREP 763
             YS  +L+ D  D   +   + S    +  A  P+ FG         + +++ E+L  E 
Sbjct: 1490 SYSPDDLEIDIVDKQLDQDDKNS----DKEAVEPDLFGVLEVCRDSSASLNDKEDLLPEN 1545

Query: 762  SWECLEKADGY-----GVGKATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDDT-TD 601
            S + LE   G+     G G+A    NS P      +   S  YL +GGGFC+DE +T T+
Sbjct: 1546 SKDHLEMGGGFVTDEDGNGQAGVSNNSYPC-----EPDASKHYLEMGGGFCMDESETGTN 1600

Query: 600  RGLQGSAECLRKATTFECDASKCSSLGEDTSKSPTRTVN 484
            +    S         FE   +       D  K P ++V+
Sbjct: 1601 QDAAHSPSMAAVGEIFESPYTSGLMKEADCPKGPVQSVS 1639


>ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 [Theobroma cacao]
            gi|508710436|gb|EOY02333.1| DNA-repair protein UVH3,
            putative isoform 1 [Theobroma cacao]
          Length = 1670

 Score =  803 bits (2073), Expect = 0.0
 Identities = 553/1346 (41%), Positives = 736/1346 (54%), Gaps = 104/1346 (7%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLLVQMRE+LMA NRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREIDEVQ++AAGRGV 
Sbjct: 321  LDLLVQMREKLMAVNRQKYQKVKKAPEQFSELQIQSYLKTVAFRREIDEVQRAAAGRGVA 380

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANREFIFS++F+GDKQVLTS  +  ++ +Q +    +PS   +N      
Sbjct: 381  GVQTSRIASEANREFIFSSSFTGDKQVLTSARKERDEDKQQEIHSNHPS-GFLNSVKSIC 439

Query: 3771 KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIEEE 3592
            K + V     +EP    + DV TYLDERG+VR+SRVR MGIRMTRDLQRNLDLMKEIE+E
Sbjct: 440  KSNVVTESVPNEPTSAPDEDVGTYLDERGQVRVSRVRGMGIRMTRDLQRNLDLMKEIEQE 499

Query: 3591 NVCMTKSAIEKSTNCR-----PDNCSKVIPNLATCYQDSNGMTCVDENNDGRILNAGTSM 3427
                 K    +S   R       N S     L T +  +     ++E+N          M
Sbjct: 500  RTNSNKDMNVQSVPDRNRIGTSKNSSSENQFLKTSHDGNCESVNLNESNQQSAFKTEACM 559

Query: 3426 EISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWEDGDIEV 3247
            EI+FED+G+++        +FA L AGDPV   S     S K + DS S+ EWE+G  E 
Sbjct: 560  EITFEDDGRNKFFDDDDD-IFARLAAGDPVTLPSPENKPSGKHTSDSDSDCEWEEGMTEG 618

Query: 3246 --EGGTLDNKLKGKPLLPDG-MGDENDLEWEDGSFDIQEGASSFSGECMDIVSKGALEEE 3076
              +G       K  P   +  + DE+++EWE+   D  + +SS   E   ++SKG LEEE
Sbjct: 619  NWDGVAHCMDAKNNPSYKESNISDESEVEWEEEPSDAPK-SSSGPVESGVMLSKGYLEEE 677

Query: 3075 ADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDG--------- 2923
            ADL+EAIRRSL D+  ++    P + EK       +  G  S      +DG         
Sbjct: 678  ADLQEAIRRSLTDIGAKKSNYFPSEFEKLKKFGKNMDEGFGSPHGKSSMDGPSFREGKVN 737

Query: 2922 ------------------------KMSQPPSTFNNKQHES---------PCHVQEDTNSP 2842
                                    + S  P   +   H S         PC   +  +S 
Sbjct: 738  QENKSCQNLDRVQKLYSVDELSISEASNFPERLSPIAHSSDRNGTLSYKPCERSDGPHSE 797

Query: 2841 DSN-----IMETNSSLEVHLTPHLEGNYCTKDLLPEKACRSYS-----FLDPLMQDISGI 2692
             S      ++ T    EVHL P  + N   +         S+S      LD ++ D+ G 
Sbjct: 798  QSRDIASTVLVTTLEREVHLAPGKQSNASNEVDGLSTVSNSWSKDSSRSLDVVLDDLPGA 857

Query: 2691 ----KTSHREVHDAPVQEKDVSQFEVQLAPGTGD---GIVADGLHNGFEAAVGSHSDRTT 2533
                K +  E   + +  +  S+ E +L     D    + A  LH   E    S     +
Sbjct: 858  ILVDKKNDSEGEPSTLVSEKKSEVETELCSMVEDKKNDLEAKSLHQSIEIVDSSIPVVQS 917

Query: 2532 NIKEAFLKDLMIDTAQQG---IEGEVHECREQ----HLGKAGSSDXXXXXXXXXXXXXXX 2374
            ++ +A   D+ I+    G    E  V+E  ++    ++     +D               
Sbjct: 918  SVNKA-TSDIHIEQELVGDRTYENYVNEAEQETDMANVKGNDYADVEFTQVSLDEELLIL 976

Query: 2373 XXXXXXXGDKQKKLERNAESVSSEMFAECQELLQIFGIPFIIAPMEAEAQCAYMELXXXX 2194
                   GD+Q+KLERNAESVSSEMFAECQELLQ+FG+P+IIAPMEAEAQCAYMEL    
Sbjct: 977  GQECMNLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNIV 1036

Query: 2193 XXXXXXXXDAFLFGARNVYKNIFDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYT 2014
                    D FLFGAR+VYKNIFDDRKYVETYFM+DIE E+GL REKL+ MALLLGSDYT
Sbjct: 1037 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKEIGLTREKLMRMALLLGSDYT 1096

Query: 2013 EGVSGIGIVNAIEVVNAFPEEDGLRRFREWIESPDPSILGKFDLQAEGSSKKIQSQVGE- 1837
            EGVSGIGIVNAIEVVNAFPEEDGL +FREWIESPDP+ILGK ++Q   S++K  S+  + 
Sbjct: 1097 EGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPAILGKLNVQEGSSARKRGSKFSDK 1156

Query: 1836 ------TDMNCSDTKLGGVAACDADISGSVDDTQK------LKQIFMNKHRNVSKNWHVP 1693
                  T M  S + + G+++ D +IS +  +TQ       +KQIFM+KHRNVSKNWH+P
Sbjct: 1157 DVISAKTSMRDSGSPIEGLSSFDQNISQADKNTQSTDCIDDIKQIFMDKHRNVSKNWHIP 1216

Query: 1692 SSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKLCWEKFGWSTQKADELLLPVLKEY 1513
            SSFPS+AVIS Y SPQVDKSTEPF+WG+PD FVLRKLCW+KFGW +QK+D+LLLPVL+EY
Sbjct: 1217 SSFPSEAVISEYCSPQVDKSTEPFTWGRPDLFVLRKLCWDKFGWGSQKSDDLLLPVLREY 1276

Query: 1512 NKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGKKSSDLMDESAQDGLRSKKKRRNQ 1333
             KRETQLRLEAFYTFNERFAKIRSKRIKKAV+GITG +SS+L+D++ Q   +S+K+RR  
Sbjct: 1277 EKRETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDAMQQVSKSRKRRRVS 1336

Query: 1332 AVAAG-NKSEEACSGQEYADVGNEAKTTEEVNETEMRNIGSPGRPLHPGGSGNRLPIEEN 1156
             V +G +KS E  + +E      ++K+ E       +++  P R   P  S  +   E+ 
Sbjct: 1337 PVKSGDDKSGEPSNWKEDIVSQRQSKSME-------KSVPKPSRKRPPQTSPGKSTPEQ- 1388

Query: 1155 FQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXXXXXXSPDDEIYSNSAQGA---- 988
                                  +S  I +             SPD E    S+ G     
Sbjct: 1389 ----------PPRAARRRKTNKQSPGIGRRKGHGARRRRRKASPDFEQSETSSSGGNSGN 1438

Query: 987  --QVSFGEQ----HQVRRSGRLRKEVKYSEFNLKSDDPDWHDESSREGSGARKESSADAP 826
              Q   GE+     QVRRS R R  V Y+  +L+ +    + ESS E     +    +A 
Sbjct: 1439 DYQEVDGEKLDRPQQVRRSMRTRNPVNYNVNDLEDEVGLSNKESSCE-----EAMEQEAA 1493

Query: 825  EDFGAAVPSIISESENLDREPSWECLEKADGYGVG-KATSQLNSSPADDIVSDTQLSNEY 649
            +D     PS  +     + + S + LE+  G+ +  K     + S   D   + + S +Y
Sbjct: 1494 DDLNEENPS-EARDPTFEEDFSRDYLERGGGFCMDEKEVGHPDESQGVDPTPEAEASKDY 1552

Query: 648  LTVGGGFCLDEDDTTDRGLQGSAECLRKATTFE-----CDASKCSSLGEDTSKSPTRTVN 484
            L +GGGFC+DE++T+        +    AT         D +  ++   + S SP R+++
Sbjct: 1553 LKMGGGFCIDENETSKDPDAACDQDPVAATDSSNGVAFTDKADDNAASAEPSSSPKRSLD 1612

Query: 483  PVQVERQGHLDTSYTTKKNPDDNTNS 406
             +Q      L+  +    N DD+  S
Sbjct: 1613 GLQNASFTELNLGHQNAANEDDSKGS 1638


>gb|KJB11471.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1635

 Score =  789 bits (2038), Expect = 0.0
 Identities = 561/1387 (40%), Positives = 736/1387 (53%), Gaps = 114/1387 (8%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREIDEVQ++AAGRGV 
Sbjct: 287  LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVA 346

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANREFIFS++F+GDKQ LTS  +  ++ +Q +    +PS      G++K+
Sbjct: 347  GVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFL---GSVKS 403

Query: 3771 --KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIE 3598
              K +  A    DE     + DV TY+D  GR+R+SRVR MGIRMTRDLQRNLDLMKEIE
Sbjct: 404  SCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIE 463

Query: 3597 EENVCMTKSAIEKSTNCRPD----NCSKVIPN----LATCYQDSNGMTCVDENNDGRILN 3442
            +E   + K    KS    PD    + SK + N    + T + D+     V+E+N      
Sbjct: 464  KERTNLNKGVNVKSV---PDKSKIDASKSVSNGNQFVETSHDDNGESVNVNESNQQSAFE 520

Query: 3441 AGTSMEISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWED 3262
              + MEI+FED+G+ +        +FA L AG+PV   S  +   +KQ   S S+ EWE+
Sbjct: 521  TESCMEITFEDDGKTEYFDDDD--IFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEE 578

Query: 3261 GDIE------VEGGTLDNKLKGKPLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIV 3100
            G +E        G   ++ L  K      + D++++EWE+   D  + +SS   E   ++
Sbjct: 579  GVVEGKWDGVTPGMNAEHNLLNKE---SNITDDSEVEWEEEPSDAPK-SSSGPVESGRML 634

Query: 3099 SKGALEEEADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGK 2920
            SKG  EEE+DL+EAIRRSL D+  ++    P   +   +     +L  D GS+H++ D  
Sbjct: 635  SKGYWEEESDLQEAIRRSLTDVGVEKSNSFPS--DVIESKNLGENLDEDFGSLHEKGDTG 692

Query: 2919 MSQPPS-----------------------------TFNNKQHESPCHVQEDTNSPDSNIM 2827
             S  P                              TFN+ +  SP H  +   +  S   
Sbjct: 693  ASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPSPVHNSDKNMTILSKFS 752

Query: 2826 ETNSSLEVHLTPHLEGNYCTKDLLPEKACRSYSFLDPLMQDISGIKT------------- 2686
            E +       + H E       L  E    +   LD + +++ G+ T             
Sbjct: 753  ERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLD-VSKEVDGLSTISDSWFKDNSHSF 811

Query: 2685 --SHREVHDA-PVQEKDVSQFEVQ-LAPGTGDGIVADGLHNG----FEAAVGSHSDRTTN 2530
              +H ++ D   V +K  S+ E   L       I A+ L       FEA     S  T N
Sbjct: 812  DAAHGDIPDTIQVDKKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVN 871

Query: 2529 IK--------EAFLKDLMIDTAQQGIEGEV--HEC---REQHLGKA-----GSSDXXXXX 2404
            +            + DL I+   Q + G++    C    EQH   +      + +     
Sbjct: 872  LSIPTVQSSANKVISDLHIE---QELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSK 928

Query: 2403 XXXXXXXXXXXXXXXXXGDKQKKLERNAESVSSEMFAECQELLQIFGIPFIIAPMEAEAQ 2224
                              D+Q+KLERNAESVSSEMFAECQELLQ+FG+P+IIAPMEAEAQ
Sbjct: 929  ASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 988

Query: 2223 CAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFDDRKYVETYFMKDIENELGLNREKLIH 2044
            CAYMEL            D FLFGAR+VYKNIFDDRKYVETYFM+DIE ELGL REKL+ 
Sbjct: 989  CAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMR 1048

Query: 2043 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLRRFREWIESPDPSILGKFDLQAEGSS 1864
            MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL +FREWIESPDP+ILGK ++Q   S+
Sbjct: 1049 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSA 1108

Query: 1863 KKIQSQVGETDMNCSDTKLGGVAACDADIS------------GSVDDTQKLKQIFMNKHR 1720
            +K   +  E D+N + T   G  + +   S             S D T  +KQIFM+KHR
Sbjct: 1109 RKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHR 1168

Query: 1719 NVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKLCWEKFGWSTQKADE 1540
            NVSKNWH+PSSFPS+AVISAYS PQVDKSTEPF+WG+PD FVLRKLCWEKFGW +QK+DE
Sbjct: 1169 NVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDE 1228

Query: 1539 LLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGKKSSDLMDESAQDGL 1360
            LLLPVL+E  KRETQLR+EAFYTFNERFAKIRSKRIKKAV+GITG +SS+L+D+  Q   
Sbjct: 1229 LLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVS 1288

Query: 1359 RSKKKRRNQAVAAG-NKSEEACSGQEYADVGNEAKTTEEVNETEMRNIGSPGRPLHPGGS 1183
            +S++KRR   V +G +KS E  + +E      ++K+T++      R   S G+ +    S
Sbjct: 1289 KSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDV----S 1344

Query: 1182 GNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXXXXXXSPDDEIYSN 1003
                  E   Q                          KG              D    + 
Sbjct: 1345 FEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQ 1404

Query: 1002 SAQGAQVSFGEQHQVRRSGRLRKEVKYSEFNLKSDDPDWHDESSREGSGARKESSADAPE 823
               G ++   +  +VRRS   R  V Y+  +L+ +    H ESS E     KE+  D  E
Sbjct: 1405 EVDGEKLD--QPREVRRSMHTRNPVNYTVKDLEDEGGLSHKESSGE-DAMEKEAGEDVKE 1461

Query: 822  DFGAAVPSIISESENLDREPS-----WECLEKADGYGVGKATSQLNSSPADDIVSDTQLS 658
                             REPS      + LE   G+ + +  + L  +   D+  +T+ +
Sbjct: 1462 KIQCEA-----------REPSLDNIYGDYLETGGGFCMDERGTDLPDA-NQDVDLETEPT 1509

Query: 657  NEYLTVGGGFCLDEDDTTDRGLQGSAECLRKATTFECDASKCSSLGEDTSKSPTRTVNPV 478
            N+YL +GGGFC++E +T      G+ E   +AT    ++S C +   D +     +  P 
Sbjct: 1510 NDYLKMGGGFCMEESETIGNPDAGNYEDPVQAT----ESSNCFAF-MDKADDNIDSAEPS 1564

Query: 477  QVERQGHLDTSYTTKKNPDD-----NTN-------SDRSEVASFQEIISEDDCGEDSSRY 334
                   LD      K PD+     N N        D  E AS  E     D G      
Sbjct: 1565 VNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDDSKESASLPE---ASDVGTTFISG 1621

Query: 333  FRAMPNL 313
              AMP+L
Sbjct: 1622 LSAMPSL 1628


>ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X6 [Gossypium raimondii]
          Length = 1401

 Score =  788 bits (2036), Expect = 0.0
 Identities = 563/1409 (39%), Positives = 743/1409 (52%), Gaps = 136/1409 (9%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREIDEVQ++AAGRGV 
Sbjct: 19   LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVA 78

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANREFIFS++F+GDKQ LTS  +  ++ +Q +    +PS      G++K+
Sbjct: 79   GVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFL---GSVKS 135

Query: 3771 --KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIE 3598
              K +  A    DE     + DV TY+D  GR+R+SRVR MGIRMTRDLQRNLDLMKEIE
Sbjct: 136  SCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIE 195

Query: 3597 EENVCMTKSAIEKSTNCRPD----NCSKVIPN----LATCYQDSNGMTCVDENNDGRILN 3442
            +E   + K    KS    PD    + SK + N    + T + D+     V+E+N      
Sbjct: 196  KERTNLNKGVNVKSV---PDKSKIDASKSVSNGNQFVETSHDDNGESVNVNESNQQSAFE 252

Query: 3441 AGTSMEISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWED 3262
              + MEI+FED+G+ +        +FA L AG+PV   S  +   +KQ   S S+ EWE+
Sbjct: 253  TESCMEITFEDDGKTEYFDDDD--IFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEE 310

Query: 3261 GDIE------VEGGTLDNKLKGKPLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIV 3100
            G +E        G   ++ L  K      + D++++EWE+   D  + +SS   E   ++
Sbjct: 311  GVVEGKWDGVTPGMNAEHNLLNKE---SNITDDSEVEWEEEPSDAPK-SSSGPVESGRML 366

Query: 3099 SKGALEEEADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGK 2920
            SKG  EEE+DL+EAIRRSL D+  ++    P   +   +     +L  D GS+H++ D  
Sbjct: 367  SKGYWEEESDLQEAIRRSLTDVGVEKSNSFPS--DVIESKNLGENLDEDFGSLHEKGDTG 424

Query: 2919 MSQPPS-----------------------------TFNNKQHESPCHVQEDTNSPDSNIM 2827
             S  P                              TFN+ +  SP H  +   +  S   
Sbjct: 425  ASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPSPVHNSDKNMTILSKFS 484

Query: 2826 ETNSSLEVHLTPHLEGNYCTKDLLPEKACRSYSFLDPLMQDISGIKT------------- 2686
            E +       + H E       L  E    +   LD + +++ G+ T             
Sbjct: 485  ERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLD-VSKEVDGLSTISDSWFKDNSHSF 543

Query: 2685 --SHREVHDA-PVQEKDVSQFEVQ-LAPGTGDGIVADGLHNG----FEAAVGSHSDRTTN 2530
              +H ++ D   V +K  S+ E   L       I A+ L       FEA     S  T N
Sbjct: 544  DAAHGDIPDTIQVDKKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVN 603

Query: 2529 IK--------EAFLKDLMIDTAQQGIEGEV--HEC---REQHLGKA-----GSSDXXXXX 2404
            +            + DL I+   Q + G++    C    EQH   +      + +     
Sbjct: 604  LSIPTVQSSANKVISDLHIE---QELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSK 660

Query: 2403 XXXXXXXXXXXXXXXXXGDKQKKLERNAESVSSEMFAECQELLQIFGIPFIIAPMEAEAQ 2224
                              D+Q+KLERNAESVSSEMFAECQELLQ+FG+P+IIAPMEAEAQ
Sbjct: 661  ASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 720

Query: 2223 CAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFDDRKYVETYFMKDIENELGLNREKLIH 2044
            CAYMEL            D FLFGAR+VYKNIFDDRKYVETYFM+DIE ELGL REKL+ 
Sbjct: 721  CAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMR 780

Query: 2043 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLRRFREWIESPDPSILGKFDLQAEGSS 1864
            MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL +FREWIESPDP+ILGK ++Q   S+
Sbjct: 781  MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSA 840

Query: 1863 KKIQSQVGETDMNCSDTKLGGVAACDADIS------------GSVDDTQKLKQIFMNKHR 1720
            +K   +  E D+N + T   G  + +   S             S D T  +KQIFM+KHR
Sbjct: 841  RKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHR 900

Query: 1719 NVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKLCWEKFGWSTQKADE 1540
            NVSKNWH+PSSFPS+AVISAYS PQVDKSTEPF+WG+PD FVLRKLCWEKFGW +QK+DE
Sbjct: 901  NVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDE 960

Query: 1539 LLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGKKSSDLMDESAQDGL 1360
            LLLPVL+E  KRETQLR+EAFYTFNERFAKIRSKRIKKAV+GITG +SS+L+D+  Q   
Sbjct: 961  LLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVS 1020

Query: 1359 RSKKKRRNQAVAAG-NKSEEACSGQEYADVGNEAKTTEEVNETEMRNIGSPGRPLHPGGS 1183
            +S++KRR   V +G +KS E  + +E      ++K+T++      R   S G+ +    S
Sbjct: 1021 KSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDV----S 1076

Query: 1182 GNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXXXXXXSPDDEIYSN 1003
                  E   Q                          KG              D    + 
Sbjct: 1077 FEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQ 1136

Query: 1002 SAQGAQVSFGEQHQVRRSGRLRKEVKYSEFNLKSDDPDWHDESSREGSGARKESSADAPE 823
               G ++   +  +VRRS   R  V Y+  +L+ +    H ESS E     KE+  D  E
Sbjct: 1137 EVDGEKLD--QPREVRRSMHTRNPVNYTVKDLEDEGGLSHKESSGE-DAMEKEAGEDVKE 1193

Query: 822  DF--GAAVPSI-------------------------ISESENLDREPSWECLEKADGYGV 724
                 A  PS+                          ++  +L+ EP+ + L+   G+ +
Sbjct: 1194 KIQCEAREPSLDNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDYLKMGGGFYM 1253

Query: 723  GKATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDDTTDRGLQGSAECLRKATTFECD 544
                 Q ++S   +  S+T  +N+YL +GGGFC++E +T      G+ E   +AT    +
Sbjct: 1254 EGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNYEDPVQAT----E 1309

Query: 543  ASKCSSLGEDTSKSPTRTVNPVQVERQGHLDTSYTTKKNPDD-----NTN-------SDR 400
            +S C +   D +     +  P        LD      K PD+     N N        D 
Sbjct: 1310 SSNCFAF-MDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDDS 1368

Query: 399  SEVASFQEIISEDDCGEDSSRYFRAMPNL 313
             E AS  E     D G        AMP+L
Sbjct: 1369 KESASLPE---ASDVGTTFISGLSAMPSL 1394


>ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X5 [Gossypium raimondii]
          Length = 1440

 Score =  788 bits (2036), Expect = 0.0
 Identities = 563/1409 (39%), Positives = 743/1409 (52%), Gaps = 136/1409 (9%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREIDEVQ++AAGRGV 
Sbjct: 58   LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVA 117

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANREFIFS++F+GDKQ LTS  +  ++ +Q +    +PS      G++K+
Sbjct: 118  GVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFL---GSVKS 174

Query: 3771 --KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIE 3598
              K +  A    DE     + DV TY+D  GR+R+SRVR MGIRMTRDLQRNLDLMKEIE
Sbjct: 175  SCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIE 234

Query: 3597 EENVCMTKSAIEKSTNCRPD----NCSKVIPN----LATCYQDSNGMTCVDENNDGRILN 3442
            +E   + K    KS    PD    + SK + N    + T + D+     V+E+N      
Sbjct: 235  KERTNLNKGVNVKSV---PDKSKIDASKSVSNGNQFVETSHDDNGESVNVNESNQQSAFE 291

Query: 3441 AGTSMEISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWED 3262
              + MEI+FED+G+ +        +FA L AG+PV   S  +   +KQ   S S+ EWE+
Sbjct: 292  TESCMEITFEDDGKTEYFDDDD--IFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEE 349

Query: 3261 GDIE------VEGGTLDNKLKGKPLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIV 3100
            G +E        G   ++ L  K      + D++++EWE+   D  + +SS   E   ++
Sbjct: 350  GVVEGKWDGVTPGMNAEHNLLNKE---SNITDDSEVEWEEEPSDAPK-SSSGPVESGRML 405

Query: 3099 SKGALEEEADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGK 2920
            SKG  EEE+DL+EAIRRSL D+  ++    P   +   +     +L  D GS+H++ D  
Sbjct: 406  SKGYWEEESDLQEAIRRSLTDVGVEKSNSFPS--DVIESKNLGENLDEDFGSLHEKGDTG 463

Query: 2919 MSQPPS-----------------------------TFNNKQHESPCHVQEDTNSPDSNIM 2827
             S  P                              TFN+ +  SP H  +   +  S   
Sbjct: 464  ASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPSPVHNSDKNMTILSKFS 523

Query: 2826 ETNSSLEVHLTPHLEGNYCTKDLLPEKACRSYSFLDPLMQDISGIKT------------- 2686
            E +       + H E       L  E    +   LD + +++ G+ T             
Sbjct: 524  ERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLD-VSKEVDGLSTISDSWFKDNSHSF 582

Query: 2685 --SHREVHDA-PVQEKDVSQFEVQ-LAPGTGDGIVADGLHNG----FEAAVGSHSDRTTN 2530
              +H ++ D   V +K  S+ E   L       I A+ L       FEA     S  T N
Sbjct: 583  DAAHGDIPDTIQVDKKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVN 642

Query: 2529 IK--------EAFLKDLMIDTAQQGIEGEV--HEC---REQHLGKA-----GSSDXXXXX 2404
            +            + DL I+   Q + G++    C    EQH   +      + +     
Sbjct: 643  LSIPTVQSSANKVISDLHIE---QELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSK 699

Query: 2403 XXXXXXXXXXXXXXXXXGDKQKKLERNAESVSSEMFAECQELLQIFGIPFIIAPMEAEAQ 2224
                              D+Q+KLERNAESVSSEMFAECQELLQ+FG+P+IIAPMEAEAQ
Sbjct: 700  ASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 759

Query: 2223 CAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFDDRKYVETYFMKDIENELGLNREKLIH 2044
            CAYMEL            D FLFGAR+VYKNIFDDRKYVETYFM+DIE ELGL REKL+ 
Sbjct: 760  CAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMR 819

Query: 2043 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLRRFREWIESPDPSILGKFDLQAEGSS 1864
            MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL +FREWIESPDP+ILGK ++Q   S+
Sbjct: 820  MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSA 879

Query: 1863 KKIQSQVGETDMNCSDTKLGGVAACDADIS------------GSVDDTQKLKQIFMNKHR 1720
            +K   +  E D+N + T   G  + +   S             S D T  +KQIFM+KHR
Sbjct: 880  RKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHR 939

Query: 1719 NVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKLCWEKFGWSTQKADE 1540
            NVSKNWH+PSSFPS+AVISAYS PQVDKSTEPF+WG+PD FVLRKLCWEKFGW +QK+DE
Sbjct: 940  NVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDE 999

Query: 1539 LLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGKKSSDLMDESAQDGL 1360
            LLLPVL+E  KRETQLR+EAFYTFNERFAKIRSKRIKKAV+GITG +SS+L+D+  Q   
Sbjct: 1000 LLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVS 1059

Query: 1359 RSKKKRRNQAVAAG-NKSEEACSGQEYADVGNEAKTTEEVNETEMRNIGSPGRPLHPGGS 1183
            +S++KRR   V +G +KS E  + +E      ++K+T++      R   S G+ +    S
Sbjct: 1060 KSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDV----S 1115

Query: 1182 GNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXXXXXXSPDDEIYSN 1003
                  E   Q                          KG              D    + 
Sbjct: 1116 FEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQ 1175

Query: 1002 SAQGAQVSFGEQHQVRRSGRLRKEVKYSEFNLKSDDPDWHDESSREGSGARKESSADAPE 823
               G ++   +  +VRRS   R  V Y+  +L+ +    H ESS E     KE+  D  E
Sbjct: 1176 EVDGEKLD--QPREVRRSMHTRNPVNYTVKDLEDEGGLSHKESSGE-DAMEKEAGEDVKE 1232

Query: 822  DF--GAAVPSI-------------------------ISESENLDREPSWECLEKADGYGV 724
                 A  PS+                          ++  +L+ EP+ + L+   G+ +
Sbjct: 1233 KIQCEAREPSLDNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDYLKMGGGFYM 1292

Query: 723  GKATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDDTTDRGLQGSAECLRKATTFECD 544
                 Q ++S   +  S+T  +N+YL +GGGFC++E +T      G+ E   +AT    +
Sbjct: 1293 EGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNYEDPVQAT----E 1348

Query: 543  ASKCSSLGEDTSKSPTRTVNPVQVERQGHLDTSYTTKKNPDD-----NTN-------SDR 400
            +S C +   D +     +  P        LD      K PD+     N N        D 
Sbjct: 1349 SSNCFAF-MDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDDS 1407

Query: 399  SEVASFQEIISEDDCGEDSSRYFRAMPNL 313
             E AS  E     D G        AMP+L
Sbjct: 1408 KESASLPE---ASDVGTTFISGLSAMPSL 1433


>ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X4 [Gossypium raimondii]
          Length = 1591

 Score =  788 bits (2036), Expect = 0.0
 Identities = 563/1409 (39%), Positives = 743/1409 (52%), Gaps = 136/1409 (9%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREIDEVQ++AAGRGV 
Sbjct: 209  LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVA 268

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANREFIFS++F+GDKQ LTS  +  ++ +Q +    +PS      G++K+
Sbjct: 269  GVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFL---GSVKS 325

Query: 3771 --KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIE 3598
              K +  A    DE     + DV TY+D  GR+R+SRVR MGIRMTRDLQRNLDLMKEIE
Sbjct: 326  SCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIE 385

Query: 3597 EENVCMTKSAIEKSTNCRPD----NCSKVIPN----LATCYQDSNGMTCVDENNDGRILN 3442
            +E   + K    KS    PD    + SK + N    + T + D+     V+E+N      
Sbjct: 386  KERTNLNKGVNVKSV---PDKSKIDASKSVSNGNQFVETSHDDNGESVNVNESNQQSAFE 442

Query: 3441 AGTSMEISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWED 3262
              + MEI+FED+G+ +        +FA L AG+PV   S  +   +KQ   S S+ EWE+
Sbjct: 443  TESCMEITFEDDGKTEYFDDDD--IFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEE 500

Query: 3261 GDIE------VEGGTLDNKLKGKPLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIV 3100
            G +E        G   ++ L  K      + D++++EWE+   D  + +SS   E   ++
Sbjct: 501  GVVEGKWDGVTPGMNAEHNLLNKE---SNITDDSEVEWEEEPSDAPK-SSSGPVESGRML 556

Query: 3099 SKGALEEEADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGK 2920
            SKG  EEE+DL+EAIRRSL D+  ++    P   +   +     +L  D GS+H++ D  
Sbjct: 557  SKGYWEEESDLQEAIRRSLTDVGVEKSNSFPS--DVIESKNLGENLDEDFGSLHEKGDTG 614

Query: 2919 MSQPPS-----------------------------TFNNKQHESPCHVQEDTNSPDSNIM 2827
             S  P                              TFN+ +  SP H  +   +  S   
Sbjct: 615  ASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPSPVHNSDKNMTILSKFS 674

Query: 2826 ETNSSLEVHLTPHLEGNYCTKDLLPEKACRSYSFLDPLMQDISGIKT------------- 2686
            E +       + H E       L  E    +   LD + +++ G+ T             
Sbjct: 675  ERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLD-VSKEVDGLSTISDSWFKDNSHSF 733

Query: 2685 --SHREVHDA-PVQEKDVSQFEVQ-LAPGTGDGIVADGLHNG----FEAAVGSHSDRTTN 2530
              +H ++ D   V +K  S+ E   L       I A+ L       FEA     S  T N
Sbjct: 734  DAAHGDIPDTIQVDKKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVN 793

Query: 2529 IK--------EAFLKDLMIDTAQQGIEGEV--HEC---REQHLGKA-----GSSDXXXXX 2404
            +            + DL I+   Q + G++    C    EQH   +      + +     
Sbjct: 794  LSIPTVQSSANKVISDLHIE---QELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSK 850

Query: 2403 XXXXXXXXXXXXXXXXXGDKQKKLERNAESVSSEMFAECQELLQIFGIPFIIAPMEAEAQ 2224
                              D+Q+KLERNAESVSSEMFAECQELLQ+FG+P+IIAPMEAEAQ
Sbjct: 851  ASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 910

Query: 2223 CAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFDDRKYVETYFMKDIENELGLNREKLIH 2044
            CAYMEL            D FLFGAR+VYKNIFDDRKYVETYFM+DIE ELGL REKL+ 
Sbjct: 911  CAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMR 970

Query: 2043 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLRRFREWIESPDPSILGKFDLQAEGSS 1864
            MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL +FREWIESPDP+ILGK ++Q   S+
Sbjct: 971  MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSA 1030

Query: 1863 KKIQSQVGETDMNCSDTKLGGVAACDADIS------------GSVDDTQKLKQIFMNKHR 1720
            +K   +  E D+N + T   G  + +   S             S D T  +KQIFM+KHR
Sbjct: 1031 RKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHR 1090

Query: 1719 NVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKLCWEKFGWSTQKADE 1540
            NVSKNWH+PSSFPS+AVISAYS PQVDKSTEPF+WG+PD FVLRKLCWEKFGW +QK+DE
Sbjct: 1091 NVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDE 1150

Query: 1539 LLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGKKSSDLMDESAQDGL 1360
            LLLPVL+E  KRETQLR+EAFYTFNERFAKIRSKRIKKAV+GITG +SS+L+D+  Q   
Sbjct: 1151 LLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVS 1210

Query: 1359 RSKKKRRNQAVAAG-NKSEEACSGQEYADVGNEAKTTEEVNETEMRNIGSPGRPLHPGGS 1183
            +S++KRR   V +G +KS E  + +E      ++K+T++      R   S G+ +    S
Sbjct: 1211 KSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDV----S 1266

Query: 1182 GNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXXXXXXSPDDEIYSN 1003
                  E   Q                          KG              D    + 
Sbjct: 1267 FEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQ 1326

Query: 1002 SAQGAQVSFGEQHQVRRSGRLRKEVKYSEFNLKSDDPDWHDESSREGSGARKESSADAPE 823
               G ++   +  +VRRS   R  V Y+  +L+ +    H ESS E     KE+  D  E
Sbjct: 1327 EVDGEKLD--QPREVRRSMHTRNPVNYTVKDLEDEGGLSHKESSGE-DAMEKEAGEDVKE 1383

Query: 822  DF--GAAVPSI-------------------------ISESENLDREPSWECLEKADGYGV 724
                 A  PS+                          ++  +L+ EP+ + L+   G+ +
Sbjct: 1384 KIQCEAREPSLDNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDYLKMGGGFYM 1443

Query: 723  GKATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDDTTDRGLQGSAECLRKATTFECD 544
                 Q ++S   +  S+T  +N+YL +GGGFC++E +T      G+ E   +AT    +
Sbjct: 1444 EGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNYEDPVQAT----E 1499

Query: 543  ASKCSSLGEDTSKSPTRTVNPVQVERQGHLDTSYTTKKNPDD-----NTN-------SDR 400
            +S C +   D +     +  P        LD      K PD+     N N        D 
Sbjct: 1500 SSNCFAF-MDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDDS 1558

Query: 399  SEVASFQEIISEDDCGEDSSRYFRAMPNL 313
             E AS  E     D G        AMP+L
Sbjct: 1559 KESASLPE---ASDVGTTFISGLSAMPSL 1584


>ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Gossypium raimondii]
          Length = 1706

 Score =  788 bits (2036), Expect = 0.0
 Identities = 563/1409 (39%), Positives = 743/1409 (52%), Gaps = 136/1409 (9%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREIDEVQ++AAGRGV 
Sbjct: 324  LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVA 383

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANREFIFS++F+GDKQ LTS  +  ++ +Q +    +PS      G++K+
Sbjct: 384  GVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFL---GSVKS 440

Query: 3771 --KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIE 3598
              K +  A    DE     + DV TY+D  GR+R+SRVR MGIRMTRDLQRNLDLMKEIE
Sbjct: 441  SCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIE 500

Query: 3597 EENVCMTKSAIEKSTNCRPD----NCSKVIPN----LATCYQDSNGMTCVDENNDGRILN 3442
            +E   + K    KS    PD    + SK + N    + T + D+     V+E+N      
Sbjct: 501  KERTNLNKGVNVKSV---PDKSKIDASKSVSNGNQFVETSHDDNGESVNVNESNQQSAFE 557

Query: 3441 AGTSMEISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWED 3262
              + MEI+FED+G+ +        +FA L AG+PV   S  +   +KQ   S S+ EWE+
Sbjct: 558  TESCMEITFEDDGKTEYFDDDD--IFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEE 615

Query: 3261 GDIE------VEGGTLDNKLKGKPLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIV 3100
            G +E        G   ++ L  K      + D++++EWE+   D  + +SS   E   ++
Sbjct: 616  GVVEGKWDGVTPGMNAEHNLLNKE---SNITDDSEVEWEEEPSDAPK-SSSGPVESGRML 671

Query: 3099 SKGALEEEADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGK 2920
            SKG  EEE+DL+EAIRRSL D+  ++    P   +   +     +L  D GS+H++ D  
Sbjct: 672  SKGYWEEESDLQEAIRRSLTDVGVEKSNSFPS--DVIESKNLGENLDEDFGSLHEKGDTG 729

Query: 2919 MSQPPS-----------------------------TFNNKQHESPCHVQEDTNSPDSNIM 2827
             S  P                              TFN+ +  SP H  +   +  S   
Sbjct: 730  ASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPSPVHNSDKNMTILSKFS 789

Query: 2826 ETNSSLEVHLTPHLEGNYCTKDLLPEKACRSYSFLDPLMQDISGIKT------------- 2686
            E +       + H E       L  E    +   LD + +++ G+ T             
Sbjct: 790  ERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLD-VSKEVDGLSTISDSWFKDNSHSF 848

Query: 2685 --SHREVHDA-PVQEKDVSQFEVQ-LAPGTGDGIVADGLHNG----FEAAVGSHSDRTTN 2530
              +H ++ D   V +K  S+ E   L       I A+ L       FEA     S  T N
Sbjct: 849  DAAHGDIPDTIQVDKKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVN 908

Query: 2529 IK--------EAFLKDLMIDTAQQGIEGEV--HEC---REQHLGKA-----GSSDXXXXX 2404
            +            + DL I+   Q + G++    C    EQH   +      + +     
Sbjct: 909  LSIPTVQSSANKVISDLHIE---QELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSK 965

Query: 2403 XXXXXXXXXXXXXXXXXGDKQKKLERNAESVSSEMFAECQELLQIFGIPFIIAPMEAEAQ 2224
                              D+Q+KLERNAESVSSEMFAECQELLQ+FG+P+IIAPMEAEAQ
Sbjct: 966  ASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 1025

Query: 2223 CAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFDDRKYVETYFMKDIENELGLNREKLIH 2044
            CAYMEL            D FLFGAR+VYKNIFDDRKYVETYFM+DIE ELGL REKL+ 
Sbjct: 1026 CAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMR 1085

Query: 2043 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLRRFREWIESPDPSILGKFDLQAEGSS 1864
            MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL +FREWIESPDP+ILGK ++Q   S+
Sbjct: 1086 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSA 1145

Query: 1863 KKIQSQVGETDMNCSDTKLGGVAACDADIS------------GSVDDTQKLKQIFMNKHR 1720
            +K   +  E D+N + T   G  + +   S             S D T  +KQIFM+KHR
Sbjct: 1146 RKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHR 1205

Query: 1719 NVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKLCWEKFGWSTQKADE 1540
            NVSKNWH+PSSFPS+AVISAYS PQVDKSTEPF+WG+PD FVLRKLCWEKFGW +QK+DE
Sbjct: 1206 NVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDE 1265

Query: 1539 LLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGKKSSDLMDESAQDGL 1360
            LLLPVL+E  KRETQLR+EAFYTFNERFAKIRSKRIKKAV+GITG +SS+L+D+  Q   
Sbjct: 1266 LLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVS 1325

Query: 1359 RSKKKRRNQAVAAG-NKSEEACSGQEYADVGNEAKTTEEVNETEMRNIGSPGRPLHPGGS 1183
            +S++KRR   V +G +KS E  + +E      ++K+T++      R   S G+ +    S
Sbjct: 1326 KSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDV----S 1381

Query: 1182 GNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXXXXXXSPDDEIYSN 1003
                  E   Q                          KG              D    + 
Sbjct: 1382 FEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQ 1441

Query: 1002 SAQGAQVSFGEQHQVRRSGRLRKEVKYSEFNLKSDDPDWHDESSREGSGARKESSADAPE 823
               G ++   +  +VRRS   R  V Y+  +L+ +    H ESS E     KE+  D  E
Sbjct: 1442 EVDGEKLD--QPREVRRSMHTRNPVNYTVKDLEDEGGLSHKESSGE-DAMEKEAGEDVKE 1498

Query: 822  DF--GAAVPSI-------------------------ISESENLDREPSWECLEKADGYGV 724
                 A  PS+                          ++  +L+ EP+ + L+   G+ +
Sbjct: 1499 KIQCEAREPSLDNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDYLKMGGGFYM 1558

Query: 723  GKATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDDTTDRGLQGSAECLRKATTFECD 544
                 Q ++S   +  S+T  +N+YL +GGGFC++E +T      G+ E   +AT    +
Sbjct: 1559 EGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNYEDPVQAT----E 1614

Query: 543  ASKCSSLGEDTSKSPTRTVNPVQVERQGHLDTSYTTKKNPDD-----NTN-------SDR 400
            +S C +   D +     +  P        LD      K PD+     N N        D 
Sbjct: 1615 SSNCFAF-MDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDDS 1673

Query: 399  SEVASFQEIISEDDCGEDSSRYFRAMPNL 313
             E AS  E     D G        AMP+L
Sbjct: 1674 KESASLPE---ASDVGTTFISGLSAMPSL 1699


>ref|XP_012444035.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Gossypium raimondii]
          Length = 1707

 Score =  788 bits (2036), Expect = 0.0
 Identities = 563/1409 (39%), Positives = 743/1409 (52%), Gaps = 136/1409 (9%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREIDEVQ++AAGRGV 
Sbjct: 325  LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVA 384

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANREFIFS++F+GDKQ LTS  +  ++ +Q +    +PS      G++K+
Sbjct: 385  GVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFL---GSVKS 441

Query: 3771 --KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIE 3598
              K +  A    DE     + DV TY+D  GR+R+SRVR MGIRMTRDLQRNLDLMKEIE
Sbjct: 442  SCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIE 501

Query: 3597 EENVCMTKSAIEKSTNCRPD----NCSKVIPN----LATCYQDSNGMTCVDENNDGRILN 3442
            +E   + K    KS    PD    + SK + N    + T + D+     V+E+N      
Sbjct: 502  KERTNLNKGVNVKSV---PDKSKIDASKSVSNGNQFVETSHDDNGESVNVNESNQQSAFE 558

Query: 3441 AGTSMEISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWED 3262
              + MEI+FED+G+ +        +FA L AG+PV   S  +   +KQ   S S+ EWE+
Sbjct: 559  TESCMEITFEDDGKTEYFDDDD--IFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEE 616

Query: 3261 GDIE------VEGGTLDNKLKGKPLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIV 3100
            G +E        G   ++ L  K      + D++++EWE+   D  + +SS   E   ++
Sbjct: 617  GVVEGKWDGVTPGMNAEHNLLNKE---SNITDDSEVEWEEEPSDAPK-SSSGPVESGRML 672

Query: 3099 SKGALEEEADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGK 2920
            SKG  EEE+DL+EAIRRSL D+  ++    P   +   +     +L  D GS+H++ D  
Sbjct: 673  SKGYWEEESDLQEAIRRSLTDVGVEKSNSFPS--DVIESKNLGENLDEDFGSLHEKGDTG 730

Query: 2919 MSQPPS-----------------------------TFNNKQHESPCHVQEDTNSPDSNIM 2827
             S  P                              TFN+ +  SP H  +   +  S   
Sbjct: 731  ASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPSPVHNSDKNMTILSKFS 790

Query: 2826 ETNSSLEVHLTPHLEGNYCTKDLLPEKACRSYSFLDPLMQDISGIKT------------- 2686
            E +       + H E       L  E    +   LD + +++ G+ T             
Sbjct: 791  ERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLD-VSKEVDGLSTISDSWFKDNSHSF 849

Query: 2685 --SHREVHDA-PVQEKDVSQFEVQ-LAPGTGDGIVADGLHNG----FEAAVGSHSDRTTN 2530
              +H ++ D   V +K  S+ E   L       I A+ L       FEA     S  T N
Sbjct: 850  DAAHGDIPDTIQVDKKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVN 909

Query: 2529 IK--------EAFLKDLMIDTAQQGIEGEV--HEC---REQHLGKA-----GSSDXXXXX 2404
            +            + DL I+   Q + G++    C    EQH   +      + +     
Sbjct: 910  LSIPTVQSSANKVISDLHIE---QELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSK 966

Query: 2403 XXXXXXXXXXXXXXXXXGDKQKKLERNAESVSSEMFAECQELLQIFGIPFIIAPMEAEAQ 2224
                              D+Q+KLERNAESVSSEMFAECQELLQ+FG+P+IIAPMEAEAQ
Sbjct: 967  ASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 1026

Query: 2223 CAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFDDRKYVETYFMKDIENELGLNREKLIH 2044
            CAYMEL            D FLFGAR+VYKNIFDDRKYVETYFM+DIE ELGL REKL+ 
Sbjct: 1027 CAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMR 1086

Query: 2043 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLRRFREWIESPDPSILGKFDLQAEGSS 1864
            MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL +FREWIESPDP+ILGK ++Q   S+
Sbjct: 1087 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSA 1146

Query: 1863 KKIQSQVGETDMNCSDTKLGGVAACDADIS------------GSVDDTQKLKQIFMNKHR 1720
            +K   +  E D+N + T   G  + +   S             S D T  +KQIFM+KHR
Sbjct: 1147 RKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHR 1206

Query: 1719 NVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKLCWEKFGWSTQKADE 1540
            NVSKNWH+PSSFPS+AVISAYS PQVDKSTEPF+WG+PD FVLRKLCWEKFGW +QK+DE
Sbjct: 1207 NVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDE 1266

Query: 1539 LLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGKKSSDLMDESAQDGL 1360
            LLLPVL+E  KRETQLR+EAFYTFNERFAKIRSKRIKKAV+GITG +SS+L+D+  Q   
Sbjct: 1267 LLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVS 1326

Query: 1359 RSKKKRRNQAVAAG-NKSEEACSGQEYADVGNEAKTTEEVNETEMRNIGSPGRPLHPGGS 1183
            +S++KRR   V +G +KS E  + +E      ++K+T++      R   S G+ +    S
Sbjct: 1327 KSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDV----S 1382

Query: 1182 GNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXXXXXXSPDDEIYSN 1003
                  E   Q                          KG              D    + 
Sbjct: 1383 FEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQ 1442

Query: 1002 SAQGAQVSFGEQHQVRRSGRLRKEVKYSEFNLKSDDPDWHDESSREGSGARKESSADAPE 823
               G ++   +  +VRRS   R  V Y+  +L+ +    H ESS E     KE+  D  E
Sbjct: 1443 EVDGEKLD--QPREVRRSMHTRNPVNYTVKDLEDEGGLSHKESSGE-DAMEKEAGEDVKE 1499

Query: 822  DF--GAAVPSI-------------------------ISESENLDREPSWECLEKADGYGV 724
                 A  PS+                          ++  +L+ EP+ + L+   G+ +
Sbjct: 1500 KIQCEAREPSLDNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDYLKMGGGFYM 1559

Query: 723  GKATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDDTTDRGLQGSAECLRKATTFECD 544
                 Q ++S   +  S+T  +N+YL +GGGFC++E +T      G+ E   +AT    +
Sbjct: 1560 EGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNYEDPVQAT----E 1615

Query: 543  ASKCSSLGEDTSKSPTRTVNPVQVERQGHLDTSYTTKKNPDD-----NTN-------SDR 400
            +S C +   D +     +  P        LD      K PD+     N N        D 
Sbjct: 1616 SSNCFAF-MDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDDS 1674

Query: 399  SEVASFQEIISEDDCGEDSSRYFRAMPNL 313
             E AS  E     D G        AMP+L
Sbjct: 1675 KESASLPE---ASDVGTTFISGLSAMPSL 1700


>ref|XP_012444025.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Gossypium raimondii]
          Length = 1710

 Score =  788 bits (2036), Expect = 0.0
 Identities = 563/1409 (39%), Positives = 743/1409 (52%), Gaps = 136/1409 (9%)
 Frame = -1

Query: 4131 LDLLVQMRERLMAENRQKYQRVKKAPARFSELQIQAYLKTVAFRREIDEVQKSAAGRGVG 3952
            LDLL QMRERLMAENRQKYQ+VKKAP +FSELQIQ+YLKTVAFRREIDEVQ++AAGRGV 
Sbjct: 328  LDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVA 387

Query: 3951 GVQTSRIASEANREFIFSTNFSGDKQVLTSTGEGSEKSEQSQTAPANPSTSAVNDGALKT 3772
            GVQTSRIASEANREFIFS++F+GDKQ LTS  +  ++ +Q +    +PS      G++K+
Sbjct: 388  GVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFL---GSVKS 444

Query: 3771 --KHSAVAGCTVDEPQRNFENDVETYLDERGRVRMSRVRAMGIRMTRDLQRNLDLMKEIE 3598
              K +  A    DE     + DV TY+D  GR+R+SRVR MGIRMTRDLQRNLDLMKEIE
Sbjct: 445  SCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIE 504

Query: 3597 EENVCMTKSAIEKSTNCRPD----NCSKVIPN----LATCYQDSNGMTCVDENNDGRILN 3442
            +E   + K    KS    PD    + SK + N    + T + D+     V+E+N      
Sbjct: 505  KERTNLNKGVNVKSV---PDKSKIDASKSVSNGNQFVETSHDDNGESVNVNESNQQSAFE 561

Query: 3441 AGTSMEISFEDNGQHQLXXXXXXDLFAHLVAGDPVMEFSVNKSLSKKQSLDSASEPEWED 3262
              + MEI+FED+G+ +        +FA L AG+PV   S  +   +KQ   S S+ EWE+
Sbjct: 562  TESCMEITFEDDGKTEYFDDDD--IFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEE 619

Query: 3261 GDIE------VEGGTLDNKLKGKPLLPDGMGDENDLEWEDGSFDIQEGASSFSGECMDIV 3100
            G +E        G   ++ L  K      + D++++EWE+   D  + +SS   E   ++
Sbjct: 620  GVVEGKWDGVTPGMNAEHNLLNKE---SNITDDSEVEWEEEPSDAPK-SSSGPVESGRML 675

Query: 3099 SKGALEEEADLKEAIRRSLQDLDDQRLVDTPDQDEKCGATTAVVSLGMDSGSVHKEVDGK 2920
            SKG  EEE+DL+EAIRRSL D+  ++    P   +   +     +L  D GS+H++ D  
Sbjct: 676  SKGYWEEESDLQEAIRRSLTDVGVEKSNSFPS--DVIESKNLGENLDEDFGSLHEKGDTG 733

Query: 2919 MSQPPS-----------------------------TFNNKQHESPCHVQEDTNSPDSNIM 2827
             S  P                              TFN+ +  SP H  +   +  S   
Sbjct: 734  ASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPSPVHNSDKNMTILSKFS 793

Query: 2826 ETNSSLEVHLTPHLEGNYCTKDLLPEKACRSYSFLDPLMQDISGIKT------------- 2686
            E +       + H E       L  E    +   LD + +++ G+ T             
Sbjct: 794  ERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLD-VSKEVDGLSTISDSWFKDNSHSF 852

Query: 2685 --SHREVHDA-PVQEKDVSQFEVQ-LAPGTGDGIVADGLHNG----FEAAVGSHSDRTTN 2530
              +H ++ D   V +K  S+ E   L       I A+ L       FEA     S  T N
Sbjct: 853  DAAHGDIPDTIQVDKKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVN 912

Query: 2529 IK--------EAFLKDLMIDTAQQGIEGEV--HEC---REQHLGKA-----GSSDXXXXX 2404
            +            + DL I+   Q + G++    C    EQH   +      + +     
Sbjct: 913  LSIPTVQSSANKVISDLHIE---QELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSK 969

Query: 2403 XXXXXXXXXXXXXXXXXGDKQKKLERNAESVSSEMFAECQELLQIFGIPFIIAPMEAEAQ 2224
                              D+Q+KLERNAESVSSEMFAECQELLQ+FG+P+IIAPMEAEAQ
Sbjct: 970  ASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 1029

Query: 2223 CAYMELXXXXXXXXXXXXDAFLFGARNVYKNIFDDRKYVETYFMKDIENELGLNREKLIH 2044
            CAYMEL            D FLFGAR+VYKNIFDDRKYVETYFM+DIE ELGL REKL+ 
Sbjct: 1030 CAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMR 1089

Query: 2043 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLRRFREWIESPDPSILGKFDLQAEGSS 1864
            MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGL +FREWIESPDP+ILGK ++Q   S+
Sbjct: 1090 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSA 1149

Query: 1863 KKIQSQVGETDMNCSDTKLGGVAACDADIS------------GSVDDTQKLKQIFMNKHR 1720
            +K   +  E D+N + T   G  + +   S             S D T  +KQIFM+KHR
Sbjct: 1150 RKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHR 1209

Query: 1719 NVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHFVLRKLCWEKFGWSTQKADE 1540
            NVSKNWH+PSSFPS+AVISAYS PQVDKSTEPF+WG+PD FVLRKLCWEKFGW +QK+DE
Sbjct: 1210 NVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDE 1269

Query: 1539 LLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVRGITGKKSSDLMDESAQDGL 1360
            LLLPVL+E  KRETQLR+EAFYTFNERFAKIRSKRIKKAV+GITG +SS+L+D+  Q   
Sbjct: 1270 LLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVS 1329

Query: 1359 RSKKKRRNQAVAAG-NKSEEACSGQEYADVGNEAKTTEEVNETEMRNIGSPGRPLHPGGS 1183
            +S++KRR   V +G +KS E  + +E      ++K+T++      R   S G+ +    S
Sbjct: 1330 KSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDV----S 1385

Query: 1182 GNRLPIEENFQXXXXXXXXXXXXXXXXXXXXRSLPINKGGXXXXXXXXXXXSPDDEIYSN 1003
                  E   Q                          KG              D    + 
Sbjct: 1386 FEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQ 1445

Query: 1002 SAQGAQVSFGEQHQVRRSGRLRKEVKYSEFNLKSDDPDWHDESSREGSGARKESSADAPE 823
               G ++   +  +VRRS   R  V Y+  +L+ +    H ESS E     KE+  D  E
Sbjct: 1446 EVDGEKLD--QPREVRRSMHTRNPVNYTVKDLEDEGGLSHKESSGE-DAMEKEAGEDVKE 1502

Query: 822  DF--GAAVPSI-------------------------ISESENLDREPSWECLEKADGYGV 724
                 A  PS+                          ++  +L+ EP+ + L+   G+ +
Sbjct: 1503 KIQCEAREPSLDNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDYLKMGGGFYM 1562

Query: 723  GKATSQLNSSPADDIVSDTQLSNEYLTVGGGFCLDEDDTTDRGLQGSAECLRKATTFECD 544
                 Q ++S   +  S+T  +N+YL +GGGFC++E +T      G+ E   +AT    +
Sbjct: 1563 EGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNYEDPVQAT----E 1618

Query: 543  ASKCSSLGEDTSKSPTRTVNPVQVERQGHLDTSYTTKKNPDD-----NTN-------SDR 400
            +S C +   D +     +  P        LD      K PD+     N N        D 
Sbjct: 1619 SSNCFAF-MDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDDS 1677

Query: 399  SEVASFQEIISEDDCGEDSSRYFRAMPNL 313
             E AS  E     D G        AMP+L
Sbjct: 1678 KESASLPE---ASDVGTTFISGLSAMPSL 1703