BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00002866
         (2264 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP07323.1| unnamed protein product [Coffea canephora]            765   0.0  
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|...   647   0.0  
ref|XP_008452911.1| PREDICTED: tRNA pseudouridine synthase A, mi...   640   e-180
ref|XP_009778087.1| PREDICTED: tRNA pseudouridine synthase A, mi...   637   e-179
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   631   e-178
ref|XP_011034929.1| PREDICTED: tRNA pseudouridine synthase A, mi...   626   e-176
ref|XP_011003107.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   626   e-176
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   626   e-176
ref|XP_009589249.1| PREDICTED: tRNA pseudouridine synthase A, mi...   625   e-176
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   624   e-175
gb|KHN42806.1| tRNA pseudouridine synthase 1 [Glycine soja]           620   e-174
gb|KOM32901.1| hypothetical protein LR48_Vigan01g245700 [Vigna a...   619   e-174
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   615   e-173
ref|XP_014510724.1| PREDICTED: tRNA pseudouridine synthase A, mi...   614   e-172
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   613   e-172
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas...   612   e-172
ref|XP_012073705.1| PREDICTED: tRNA pseudouridine synthase A, mi...   611   e-172
ref|XP_010266077.1| PREDICTED: tRNA pseudouridine synthase A, mi...   609   e-171
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi...   609   e-171
ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mi...   607   e-170

>emb|CDP07323.1| unnamed protein product [Coffea canephora]
          Length = 423

 Score =  765 bits (1976), Expect = 0.0
 Identities = 388/438 (88%), Positives = 400/438 (91%), Gaps = 1/438 (0%)
 Frame = -2

Query: 1855 MQKNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYV 1676
            MQKNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYV
Sbjct: 1    MQKNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYV 60

Query: 1675 DPPGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESV 1496
            DPPGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESV
Sbjct: 61   DPPGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESV 120

Query: 1495 LASLGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGK 1316
            LASLGS++ELVKCLECSERGRKVEGIMGKR FDSKIGLDV KLESGISS+N+DAGTT  K
Sbjct: 121  LASLGSENELVKCLECSERGRKVEGIMGKRNFDSKIGLDVGKLESGISSNNQDAGTTEEK 180

Query: 1315 IKDFSLGANGSNDSGHLSNDTPKELENGGYEIEKTEEDEVLVQDVNQEEAKAIKMSXXXX 1136
            IKDFSLGAN                 NGG++IEKTEEDEVLVQDVNQEE KAIK S    
Sbjct: 181  IKDFSLGAN-----------------NGGFDIEKTEEDEVLVQDVNQEEVKAIKKSDFRY 223

Query: 1135 XXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKCEV 956
                     R+L+YYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKCEV
Sbjct: 224  GEEERERFNRVLQYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKCEV 283

Query: 955  VGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVGLYLDECFFSSY 776
            +GQSFMLHQIRKMIGLAVAIMRNIAPESLIETAF+QDV+INVPMAPEVGLYLDECFFSSY
Sbjct: 284  IGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFRQDVDINVPMAPEVGLYLDECFFSSY 343

Query: 775  NQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRNYPDLRFI 596
            NQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRNYPDLRFI
Sbjct: 344  NQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRNYPDLRFI 403

Query: 595  KNNVNN-VESLGIEAEDG 545
             NNVNN VESLGIEA+DG
Sbjct: 404  NNNVNNDVESLGIEAKDG 421


>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|508726926|gb|EOY18823.1|
            Pseudouridine synthase [Theobroma cacao]
          Length = 507

 Score =  647 bits (1669), Expect = 0.0
 Identities = 339/494 (68%), Positives = 388/494 (78%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            DPK+LKMS   T+ TSDDE+          A    KK RYKRRK+AIF AYCGVGYQGMQ
Sbjct: 26   DPKRLKMS---TTTTSDDEE-------TASATNGTKKQRYKRRKIAIFFAYCGVGYQGMQ 75

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEALFH+GAVPEQDRG PKR+DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 76   KNPGAKTIEGDLEEALFHSGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 135

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PGLV+RLN ILP QIRIFGYKRVTASFN+KKFCDRRRYVYLIPVFALDPSCHRDRESVLA
Sbjct: 136  PGLVERLNRILPAQIRIFGYKRVTASFNSKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 195

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIK 1310
            SLGS +ELVKCLECSERGRKV G+MGKR F++K  +    + S +SS+N   G +G  IK
Sbjct: 196  SLGSGNELVKCLECSERGRKVAGVMGKRSFEAKSTI----VHSDVSSNN---GESGNVIK 248

Query: 1309 DFSLGANGSNDSGHLSNDTPKELENGGYEIEKTEEDEVLVQDVNQEEAKAIKMSXXXXXX 1130
            + +L       +  L   T   ++N     E TE D+V V+ +  EE +           
Sbjct: 249  EHNL-------TSELEEVTDSSVQN-----EFTEVDKVNVEKIPLEERR------FCYGE 290

Query: 1129 XXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKCEVVG 950
                   RILK+Y G+HNFHNFTTRTKAEDP+ARRYI+SF A T VNVEGI+FVKCEVVG
Sbjct: 291  EEKGLFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIVSFHANTVVNVEGIDFVKCEVVG 350

Query: 949  QSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVGLYLDECFFSSYNQ 770
            QSFMLHQIRKMIG+AVA+MRN APESLIETA ++DV+INVP APEVGLYLDEC F+SYNQ
Sbjct: 351  QSFMLHQIRKMIGMAVAVMRNCAPESLIETALRKDVSINVPTAPEVGLYLDECLFASYNQ 410

Query: 769  KWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRNYPDLRFIKN 590
            KWKDSHEELSM+ Y EEAE+FKM++IYSHIASTE +EGVVALWLHSLN+RNYPDLR    
Sbjct: 411  KWKDSHEELSMKAYEEEAEEFKMKFIYSHIASTEREEGVVALWLHSLNHRNYPDLRGC-- 468

Query: 589  NVNNVESLGIEAED 548
            NV  +E + ++ +D
Sbjct: 469  NVEMIEGMSLKVDD 482


>ref|XP_008452911.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            melo] gi|659104353|ref|XP_008452912.1| PREDICTED: tRNA
            pseudouridine synthase A, mitochondrial-like [Cucumis
            melo] gi|307136307|gb|ADN34131.1| tRNA pseudouridine
            synthase family protein [Cucumis melo subsp. melo]
          Length = 519

 Score =  640 bits (1650), Expect = e-180
 Identities = 337/502 (67%), Positives = 379/502 (75%), Gaps = 9/502 (1%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            DPKKLKMS+ TT  TSDDED++    S   AP   KK RYKRRKVAIF AYCGVGYQGMQ
Sbjct: 22   DPKKLKMSSTTT--TSDDEDVN----SNSAAP---KKQRYKRRKVAIFFAYCGVGYQGMQ 72

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIE DLEEAL+ AGAVPEQDRG  KR+DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 73   KNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDP 132

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PG V RLNS L PQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDP+CHRDRESV A
Sbjct: 133  PGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKA 192

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGT-TGGKI 1313
            SLGS +ELVKCLECSERGRKVEG+MGKR F+ K  +    + S I ++ E +     G +
Sbjct: 193  SLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTAITESDISSNIVNAIEVSDVQANGVL 252

Query: 1312 KDFSLGANGSNDSGHLSNDTPKELENGGYEIEKTEEDEV--------LVQDVNQEEAKAI 1157
            +D +  ++ +  +  L  +T  EL      I K+E  E+        +V        K  
Sbjct: 253  EDSATTSDSNKQTSVLVENTATELTVASEGIAKSESSEMSGLGNDSEIVVSKESVNGKEK 312

Query: 1156 KMSXXXXXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGI 977
                            RILK+Y GTHNFHNFTTRTKAEDPAARR+I+SFDA TTV VEGI
Sbjct: 313  PSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASTTVVVEGI 372

Query: 976  EFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVGLYLD 797
            EFVKCEVVGQSFMLHQIRKM+GLAVAIMRN APESLIE A Q+DVNINVP APEVGLYLD
Sbjct: 373  EFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLD 432

Query: 796  ECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRN 617
            EC F+SYNQKWKD+HEE+SM+ Y E AEDFKM+ IYSHIASTEHK+G VALWLHSLN+RN
Sbjct: 433  ECLFTSYNQKWKDTHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRN 492

Query: 616  YPDLRFIKNNVNNVESLGIEAE 551
            YPDLR I       ++  ++ E
Sbjct: 493  YPDLRVIDEVAKIAKNTSVDME 514


>ref|XP_009778087.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Nicotiana
            sylvestris]
          Length = 596

 Score =  637 bits (1642), Expect = e-179
 Identities = 332/496 (66%), Positives = 385/496 (77%), Gaps = 4/496 (0%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            +PKK KMS    + TSDDE+  T  + A + P P++KPRYKRRK+AIF AYCGVGYQGMQ
Sbjct: 15   EPKKQKMS----TTTSDDEEAATA-AVAGDGPAPERKPRYKRRKIAIFFAYCGVGYQGMQ 69

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEAL+ AG VPE D+  P+R+DWARSARTDKGVSAVGQVVSGRFYVDP
Sbjct: 70   KNPGAKTIEGDLEEALYQAGGVPEHDKCQPRRYDWARSARTDKGVSAVGQVVSGRFYVDP 129

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PG + RLNSIL PQIRIFG+KRVT +FNAKKFCDRRRYVY +PVFALDPS HRDRE+VLA
Sbjct: 130  PGFIDRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVPVFALDPSSHRDRETVLA 189

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIK 1310
            S+GS  ELVKCLECSERGRKV G+MGKR +D      +   E G   +N DA  T   I+
Sbjct: 190  SVGSGKELVKCLECSERGRKVFGVMGKRVYDPITKSVIVVAEPGNMPNNGDAQVTLQNIE 249

Query: 1309 DFSLGANGSNDSGHLSNDTPKELENGGYEIEKTEEDEVLVQDVNQEEAKAI----KMSXX 1142
                 +N + ++  +  ++   +ENG    EK EE +  V+    E AKAI    + S  
Sbjct: 250  -----SNVNVNANDVITESNMVIENGASLSEKGEETKEEVEK-GDENAKAIEEQVEESVF 303

Query: 1141 XXXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKC 962
                       RILKYY+GTHNFHNFTTRTKA+DPAA+RYIISF A T VNVEGIEFVKC
Sbjct: 304  SYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANTIVNVEGIEFVKC 363

Query: 961  EVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVGLYLDECFFS 782
            EVVGQSFMLHQIRKMIGLAVAIMRN APESLI+TAF++DVNINVPMAPEVGLYLDECFF+
Sbjct: 364  EVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRRDVNINVPMAPEVGLYLDECFFT 423

Query: 781  SYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRNYPDLR 602
            SYN KWKD+HEE+S++ Y E AE+FKM+YIYSHIASTEHK+G +ALWLHSLNYRNYPDLR
Sbjct: 424  SYNSKWKDTHEEVSLKAYTEAAEEFKMKYIYSHIASTEHKDGTMALWLHSLNYRNYPDLR 483

Query: 601  FIKNNVNNVESLGIEA 554
             + N+ +   S G +A
Sbjct: 484  GVDNDNSAGASDGSKA 499


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus] gi|700200317|gb|KGN55475.1| hypothetical protein
            Csa_4G652870 [Cucumis sativus]
          Length = 519

 Score =  631 bits (1627), Expect = e-178
 Identities = 336/505 (66%), Positives = 377/505 (74%), Gaps = 13/505 (2%)
 Frame = -2

Query: 2026 PKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQK 1847
            PKKLKMS+ TT  TSDDED++    S   AP   KK RYKRRKVAIF AYCGVGYQGMQK
Sbjct: 23   PKKLKMSSTTT--TSDDEDVN----SNSAAP---KKQRYKRRKVAIFFAYCGVGYQGMQK 73

Query: 1846 NPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDPP 1667
            NPGAKTIE DLEEAL+ AGAVPEQDRG  KR+DWARSARTDKGVSAVGQVVSGRFY+DPP
Sbjct: 74   NPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPP 133

Query: 1666 GLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLAS 1487
            G V RLNS L PQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDP+CHRDRESV AS
Sbjct: 134  GFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKAS 193

Query: 1486 LGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDA-----GTTG 1322
            LGS +ELVKCLECSERGRKVEG++GKR F+ K  +     ES ISS+  +A         
Sbjct: 194  LGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAI----TESDISSNTVNAIEVSDVQAN 249

Query: 1321 GKIKDFSLGANGSNDSGHLSNDTPKELENGGYEIEKTEEDEV--------LVQDVNQEEA 1166
            G ++D +  ++ +  +  L  +T  EL  G     K+E  E+        +V        
Sbjct: 250  GVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSESSEMSGLGSDSEIVVSKESVNG 309

Query: 1165 KAIKMSXXXXXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNV 986
            K                  RILK+Y GTHNFHNFTTRTKAEDPAARR+I+SFDA   V V
Sbjct: 310  KEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASAIVVV 369

Query: 985  EGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVGL 806
            EGIEFVKCEVVGQSFMLHQIRKM+GLAVAIMRN APESLIE A Q+DVNINVP APEVGL
Sbjct: 370  EGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGL 429

Query: 805  YLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLN 626
            YLDEC F+SYNQKWKD+HEE+SM+ Y E AEDFKM+ IYSHIASTEHK+G VALWLHSLN
Sbjct: 430  YLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIASTEHKDGAVALWLHSLN 489

Query: 625  YRNYPDLRFIKNNVNNVESLGIEAE 551
            +RNYPDLR I       ++  ++ E
Sbjct: 490  HRNYPDLRVIDEVAKIAKNASLDME 514


>ref|XP_011034929.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Populus
            euphratica]
          Length = 534

 Score =  626 bits (1615), Expect = e-176
 Identities = 332/500 (66%), Positives = 374/500 (74%), Gaps = 16/500 (3%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            D KK KMS    + TSDDED  T+        T  KK RYKRRK+AIF AYCGVGYQGMQ
Sbjct: 19   DLKKPKMS----TTTSDDEDAATMTPGGD---TTTKKQRYKRRKIAIFFAYCGVGYQGMQ 71

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEALFHAGAVPEQDRG PKR+DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 72   KNPGAKTIEGDLEEALFHAGAVPEQDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 131

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PGLV+RL+S L PQ RIFGYKRVT SFNAKKFCDRRRYVYLIPVFALDP  HRDRESVLA
Sbjct: 132  PGLVERLHSNLSPQFRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCSHRDRESVLA 191

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIK 1310
            SLGS  EL+KCLECSERGRKV G +GKR F+       DK  S  S   E+ G       
Sbjct: 192  SLGSGSELIKCLECSERGRKVAGAVGKRSFELTDISSNDKDASVKSEIKEEVGVHLDNGL 251

Query: 1309 DFSLGANGSNDSGHLSND------------TPKELENGGYEIEKTEEDEVLVQDVNQEEA 1166
            +    +   N++    ND             P   E+     E  +E  V V++ + E+ 
Sbjct: 252  EDIRNSETVNETKIFQNDGCGSKSVMPEPVIPSNSEDANVNTENKDEIIVSVENGDDEKT 311

Query: 1165 KA----IKMSXXXXXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKT 998
            K+    +K S             RIL YY G+HNFHNFTTRTKAEDP+ARRY++SF+AKT
Sbjct: 312  KSKEEMVKRSRFCYGEKEKERFNRILGYYVGSHNFHNFTTRTKAEDPSARRYMVSFEAKT 371

Query: 997  TVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAP 818
            TVNVEGIEFVKCEVVGQSFMLHQIRKMIG+AVAIMRN APESLI+TA Q+DVNINVP AP
Sbjct: 372  TVNVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIQTALQKDVNINVPTAP 431

Query: 817  EVGLYLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWL 638
            EVGLYLDEC F+SYN+KWKDSHEE+SM+ Y EEAEDFKM++IYSHIA+TEHKEG V+LWL
Sbjct: 432  EVGLYLDECLFTSYNKKWKDSHEEISMKDYEEEAEDFKMKHIYSHIATTEHKEGSVSLWL 491

Query: 637  HSLNYRNYPDLRFIKNNVNN 578
            HSLN RNYPDLR + N V++
Sbjct: 492  HSLNQRNYPDLR-VSNTVDD 510


>ref|XP_011003107.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
            mitochondrial [Populus euphratica]
          Length = 538

 Score =  626 bits (1614), Expect = e-176
 Identities = 343/511 (67%), Positives = 379/511 (74%), Gaps = 28/511 (5%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            D K+ KMSA T    S+DED  T         T  KK RYKRRK+AIF AYCGVGYQGMQ
Sbjct: 19   DLKRPKMSATT----SEDEDAATTTPGDD---TTIKKQRYKRRKIAIFFAYCGVGYQGMQ 71

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEALFHAGAVPE DRG PKR+DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 72   KNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 131

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PGLV+RL+S L PQIRIFGYKRVT SFNAKKFCDRRRYVYLIPVFAL+P  HRDRESVLA
Sbjct: 132  PGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALNPCSHRDRESVLA 191

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIK 1310
            SLGS  ELVKCL+CSERGRKV G +GKR F+SK   DV   E     SN+   T   +IK
Sbjct: 192  SLGSGSELVKCLQCSERGRKVVGAVGKRSFESK--SDVSPTEIW---SNDKDTTLKYEIK 246

Query: 1309 DFSLGANGSNDSGHLSNDTPK------ELENGGYEIEKTE----------------EDEV 1196
            +   G   + D G + N  P       + E+ G + E TE                +DE+
Sbjct: 247  EEVSGLMDNGD-GDIRNSEPVDETKVFQNEDSGKKSETTESGISSNSEDANANPEIKDEM 305

Query: 1195 LVQDVN------QEEAKAIKMSXXXXXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPA 1034
            +V   N      + E +AIK S             RIL YY G+HNFHNFTTRTKAEDP+
Sbjct: 306  MVSIENGDDKNTKSEEEAIKGSGFCYGEKEKERFNRILNYYVGSHNFHNFTTRTKAEDPS 365

Query: 1033 ARRYIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAF 854
            A+RYIISFDAKTTV VEGIEFVKCEVVGQSFMLHQIRKMIG+AVAIMRN A ESLI+TA 
Sbjct: 366  AQRYIISFDAKTTVTVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCASESLIQTAL 425

Query: 853  QQDVNINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIAS 674
            Q++VNINVP APEVGLYLDECFF+SYNQKWKDSHEELSM+ Y EEAE+FKMQ+IYSHIA+
Sbjct: 426  QKNVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEAEEFKMQHIYSHIAT 485

Query: 673  TEHKEGVVALWLHSLNYRNYPDLRFIKNNVN 581
            TEHKEG VALWLHSLNY NYPDLR   N  N
Sbjct: 486  TEHKEGSVALWLHSLNYXNYPDLRVCDNGDN 516


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
            gi|550339814|gb|EEE94755.2| hypothetical protein
            POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  626 bits (1614), Expect = e-176
 Identities = 336/497 (67%), Positives = 380/497 (76%), Gaps = 5/497 (1%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            D K+ KMS    + TS+DED  T         T  KK RYKRRK+AIFL YCGVGYQGMQ
Sbjct: 19   DLKRPKMS----TTTSEDEDAATTTPGDD---TTIKKQRYKRRKIAIFLTYCGVGYQGMQ 71

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEALFHAGAVPE DRG PKR+DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 72   KNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 131

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PGLV+RL+S L PQIRIFGYKRVT SFNAKKFCDRRRYVYLIPVFAL+P  HRDRESVLA
Sbjct: 132  PGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALNPCSHRDRESVLA 191

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIK 1310
            SLGS  ELVKCL+CSERGRKV G +GKR F+SK   DV   E     SN+   T   +IK
Sbjct: 192  SLGSGSELVKCLQCSERGRKVVGAVGKRSFESK--SDVSPTEIW---SNDKDTTLKSEIK 246

Query: 1309 D---FSLGANGSNDSGHLSNDTPKELENGGYEIEKTEEDEVLVQDVNQEEAKAIKMSXXX 1139
            +    S  +  +N +  + ++    +ENG  +  K+EE+             AIK S   
Sbjct: 247  EEVSISSNSEDANANPEIKDEIMVSIENGDDKNTKSEEE-------------AIKGSGFC 293

Query: 1138 XXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKCE 959
                      RIL YY G+HNFHNFTTRTKAEDP+A+RYIISFDAKTTV VEGIEFVKCE
Sbjct: 294  YGEKEKERFNRILNYYLGSHNFHNFTTRTKAEDPSAQRYIISFDAKTTVAVEGIEFVKCE 353

Query: 958  VVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVGLYLDECFFSS 779
            VVGQSFMLHQIRKMIG+AVAIMRN A ESLI+TA Q++VNINVP APEVGLYLDECFF+S
Sbjct: 354  VVGQSFMLHQIRKMIGVAVAIMRNCASESLIQTALQKNVNINVPTAPEVGLYLDECFFTS 413

Query: 778  YNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRNYPDLRF 599
            YNQKWKDSHEELSM+ Y EEAE+FKM++IYSHIA+TEHKEG VALWLHSLN+RNYPDLR 
Sbjct: 414  YNQKWKDSHEELSMKDYEEEAEEFKMKHIYSHIATTEHKEGSVALWLHSLNHRNYPDLRA 473

Query: 598  IKN--NVNNVESLGIEA 554
              N  N+ + ++ G E+
Sbjct: 474  CDNGDNITSEDNNGRES 490


>ref|XP_009589249.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Nicotiana tomentosiformis]
          Length = 596

 Score =  625 bits (1612), Expect = e-176
 Identities = 320/482 (66%), Positives = 376/482 (78%), Gaps = 3/482 (0%)
 Frame = -2

Query: 2026 PKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQK 1847
            PKK KMS    + TSDDE+  T  + A + P P++KPRYKRRK+A+F AYCGVGYQGMQK
Sbjct: 16   PKKQKMS----TTTSDDEEAATA-AVAGDGPAPERKPRYKRRKIALFFAYCGVGYQGMQK 70

Query: 1846 NPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDPP 1667
            NPGAKTIEGDLEEAL+ AG VP+ D+  P+R+DWARSARTDKGVSAVGQVVSGRFYVDPP
Sbjct: 71   NPGAKTIEGDLEEALYQAGGVPDHDKCQPRRYDWARSARTDKGVSAVGQVVSGRFYVDPP 130

Query: 1666 GLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLAS 1487
            G + RLNSIL PQIRIFG+KRVT +FNAKKFCDRRRYVY +PVFALDPS HRDRE+VLAS
Sbjct: 131  GFIDRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVPVFALDPSSHRDRETVLAS 190

Query: 1486 LGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIKD 1307
            +GS  ELVKCLECSERGRKV G+MGKR FD      + K    ++       T   ++  
Sbjct: 191  VGSGKELVKCLECSERGRKVFGVMGKRVFD-----PITKSVIVVAEPCNMPNTGDAQLTL 245

Query: 1306 FSLGANGSNDSGHLSNDTPKELENGGYEIEKTEE--DEVLVQDVNQEEA-KAIKMSXXXX 1136
             +  +N + ++  +  ++   +ENG    EK EE  +EV   D N +   + ++ S    
Sbjct: 246  QNTESNVNVNANDVITESNMVIENGASVSEKVEETKEEVEKGDENAKTVEEQVEESVFCY 305

Query: 1135 XXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKCEV 956
                     RILKYY+GTHNFHNFTTRTKA+DPAA+RYIISF A T VNVE IEFVKCEV
Sbjct: 306  GEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANTIVNVESIEFVKCEV 365

Query: 955  VGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVGLYLDECFFSSY 776
            VGQSFMLHQIRKMIGLAVAIMRN APESLI+TAF++DVNINVPMAPEVGLYLDECFF+SY
Sbjct: 366  VGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRRDVNINVPMAPEVGLYLDECFFTSY 425

Query: 775  NQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRNYPDLRFI 596
            N KWKD+HEE+S++ Y+E AE+FKM+YIYSHIASTEHK+G +ALWLHSLNYRNYPDLR +
Sbjct: 426  NSKWKDTHEEVSLKAYSEAAEEFKMKYIYSHIASTEHKDGTMALWLHSLNYRNYPDLRAV 485

Query: 595  KN 590
             N
Sbjct: 486  DN 487


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max] gi|947124071|gb|KRH72277.1| hypothetical
            protein GLYMA_02G202300 [Glycine max]
          Length = 548

 Score =  624 bits (1608), Expect = e-175
 Identities = 333/491 (67%), Positives = 374/491 (76%), Gaps = 13/491 (2%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            +PKKLKMS    + TSDDE+  T             K RYKRRKVAIF AYCGVGYQGMQ
Sbjct: 25   EPKKLKMS----TTTSDDEETGT-------------KKRYKRRKVAIFFAYCGVGYQGMQ 67

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEAL+ +GAVPEQDRG PKR+DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 68   KNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 127

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PGLV RLNS LP QIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRE+V+A
Sbjct: 128  PGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMA 187

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIK 1310
            SLGS +ELVKCLECSERGRKV G++G RK    + L+   +E+GI SSN D+G T     
Sbjct: 188  SLGSGNELVKCLECSERGRKVVGLVGNRK--QNLELEAVDVEAGI-SSNRDSGVTEDVEV 244

Query: 1309 DFSLG-------ANGSNDSGHLSNDT------PKELENGGYEIEKTEEDEVLVQDVNQEE 1169
              S G        +G+++ G ++  T      P + E      E     ++L ++    E
Sbjct: 245  SLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEKVNGE 304

Query: 1168 AKAIKMSXXXXXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVN 989
             K    S             +ILK + GTHNFHNFTTRTKAEDPAARRYIISF+A TT+ 
Sbjct: 305  DKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLV 364

Query: 988  VEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVG 809
            VEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIMRN APESLI+ A QQDVNINVP APEVG
Sbjct: 365  VEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVG 424

Query: 808  LYLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSL 629
            LYLDECFF+SYNQKWKD HEELSM+ Y +EA++FKM+YIYSHIASTE KEG VALWLHSL
Sbjct: 425  LYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSL 483

Query: 628  NYRNYPDLRFI 596
            N+RNYPDLR I
Sbjct: 484  NHRNYPDLRVI 494


>gb|KHN42806.1| tRNA pseudouridine synthase 1 [Glycine soja]
          Length = 552

 Score =  620 bits (1599), Expect = e-174
 Identities = 334/491 (68%), Positives = 375/491 (76%), Gaps = 13/491 (2%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            +PKKLKMS    + TSDDE+          A T  KK RYKRRKVAIF AYCGVGYQGMQ
Sbjct: 25   EPKKLKMS----TTTSDDEECI--------AGTGTKK-RYKRRKVAIFFAYCGVGYQGMQ 71

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEAL+ +GAVPEQDRG PKR+DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 72   KNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 131

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PGLV RLNS LP QIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRE+V+A
Sbjct: 132  PGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMA 191

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIK 1310
            SLGS +ELVKCLECSERGRKV G++G RK    + L+   +E+GI SSN D+G T     
Sbjct: 192  SLGSGNELVKCLECSERGRKVVGLVGNRK--QNLELEAVDVEAGI-SSNRDSGVTEDVEV 248

Query: 1309 DFSLG-------ANGSNDSGHLSNDT------PKELENGGYEIEKTEEDEVLVQDVNQEE 1169
              S G        +G+++ G ++  T      P + E      E     ++L ++    E
Sbjct: 249  SLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEKVNGE 308

Query: 1168 AKAIKMSXXXXXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVN 989
             K    S             +ILK + GTHNFHNFTTRTKAEDPAARRYIISF+A TT+ 
Sbjct: 309  DKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLV 368

Query: 988  VEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVG 809
            VEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIMRN APESLI+ A QQDVNINVP APEVG
Sbjct: 369  VEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVG 428

Query: 808  LYLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSL 629
            LYLDECFF+SYNQKWKD HEELSM+ Y +EA++FKM+YIYSHIASTE KEG VALWLHSL
Sbjct: 429  LYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSL 487

Query: 628  NYRNYPDLRFI 596
            N+RNYPDL  I
Sbjct: 488  NHRNYPDLHVI 498


>gb|KOM32901.1| hypothetical protein LR48_Vigan01g245700 [Vigna angularis]
          Length = 611

 Score =  619 bits (1596), Expect = e-174
 Identities = 328/501 (65%), Positives = 372/501 (74%), Gaps = 23/501 (4%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            +PKKLKMS    + TSDDE+  T P +         K RYKRRKVAIF AYCGVGYQGMQ
Sbjct: 25   EPKKLKMS----TTTSDDEECKTAPGT---------KKRYKRRKVAIFFAYCGVGYQGMQ 71

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEAL+ +GAVPE DRG PKR+DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 72   KNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 131

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PGLV RLNS LP QIRIFGYKRVT SF+AKKFCDRRRYVYLIPVFALDPSCHRDRE+V+A
Sbjct: 132  PGLVDRLNSNLPSQIRIFGYKRVTGSFSAKKFCDRRRYVYLIPVFALDPSCHRDRETVMA 191

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKI-GLDVDKLESGISSSNEDAGTTGGKI 1313
            SLGS +ELVKCLECSERGRKV G++G RK + ++  +DVD      + SN D        
Sbjct: 192  SLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVD------AGSNRDVVLDSVVA 245

Query: 1312 KDFSLGANGSNDS---GHLSNDTPKELENGGYEIEKTEEDEVLVQD-------------- 1184
            +D  +  +  +D+   G    DT  E+   G   E   E+ + VQD              
Sbjct: 246  EDVEVSLSKGDDNHLNGESGIDTKGEVLVDGTNPETGIENMITVQDEDMPLNGESVNNSD 305

Query: 1183 -VNQEEAKAIKMSXXXXXXXXXXXXXR----ILKYYQGTHNFHNFTTRTKAEDPAARRYI 1019
             + +E+   +  S                  +L ++ GTHNFHNFTTRTKA+DPAARRYI
Sbjct: 306  IIEEEKMNGVDKSTGGSRFCYGEKERERFNKVLNFFVGTHNFHNFTTRTKAQDPAARRYI 365

Query: 1018 ISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVN 839
            ISF+A TTV VEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRN APESLI  A QQDVN
Sbjct: 366  ISFNANTTVVVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLINKALQQDVN 425

Query: 838  INVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKE 659
            INVP APEVGLYLDECFFSSYNQKWKDSHEE+SM+ Y +EAE+FKM+YIYSHI+STE KE
Sbjct: 426  INVPTAPEVGLYLDECFFSSYNQKWKDSHEEVSMKAYEKEAEEFKMKYIYSHISSTEQKE 485

Query: 658  GVVALWLHSLNYRNYPDLRFI 596
            G VALWLHSLN+RNYPDLR +
Sbjct: 486  GTVALWLHSLNHRNYPDLRVV 506


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 518

 Score =  615 bits (1587), Expect = e-173
 Identities = 326/480 (67%), Positives = 367/480 (76%), Gaps = 13/480 (2%)
 Frame = -2

Query: 1996 TSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQKNPGAKTIEGD 1817
            ++ TSDDE+  T             K RYKRRKVAIF AYCGVGYQGMQKNPGAKTIEGD
Sbjct: 2    STTTSDDEETGT-------------KKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGD 48

Query: 1816 LEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDPPGLVQRLNSIL 1637
            LEEAL+ +GAVPEQDRG PKR+DWARSARTDKGVSAVGQVVSGRFY+DPPGLV RLNS L
Sbjct: 49   LEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNL 108

Query: 1636 PPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASLGSKDELVKC 1457
            P QIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRE+V+ASLGS +ELVKC
Sbjct: 109  PSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNELVKC 168

Query: 1456 LECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIKDFSLG------ 1295
            LECSERGRKV G++G RK    + L+   +E+GI SSN D+G T       S G      
Sbjct: 169  LECSERGRKVVGLVGNRK--QNLELEAVDVEAGI-SSNRDSGVTEDVEVSLSKGDDNHLN 225

Query: 1294 -ANGSNDSGHLSNDT------PKELENGGYEIEKTEEDEVLVQDVNQEEAKAIKMSXXXX 1136
              +G+++ G ++  T      P + E      E     ++L ++    E K    S    
Sbjct: 226  EESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEKVNGEDKPTNGSRFCY 285

Query: 1135 XXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKCEV 956
                     +ILK + GTHNFHNFTTRTKAEDPAARRYIISF+A TT+ VEG+EFVKCEV
Sbjct: 286  GEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLVVEGVEFVKCEV 345

Query: 955  VGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVGLYLDECFFSSY 776
            VGQSFMLHQIRKMIGLAVAIMRN APESLI+ A QQDVNINVP APEVGLYLDECFF+SY
Sbjct: 346  VGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLYLDECFFTSY 405

Query: 775  NQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRNYPDLRFI 596
            NQKWKD HEELSM+ Y +EA++FKM+YIYSHIASTE KEG VALWLHSLN+RNYPDLR I
Sbjct: 406  NQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSLNHRNYPDLRVI 464


>ref|XP_014510724.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X1
            [Vigna radiata var. radiata]
          Length = 573

 Score =  614 bits (1583), Expect = e-172
 Identities = 329/501 (65%), Positives = 372/501 (74%), Gaps = 23/501 (4%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            +PKKLKMS    + TSDDE+  T P +         K RYKRRKVAIF AYCGVGYQGMQ
Sbjct: 25   EPKKLKMS----TTTSDDEECKTAPGT---------KKRYKRRKVAIFFAYCGVGYQGMQ 71

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEAL+ +GAVPE DRG PKR+DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 72   KNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 131

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PG V RLNS LP QIRIFGYKRVT SFNAKKFCDRRRYVYLIPVFALDPSCHRDRE+V+A
Sbjct: 132  PGFVDRLNSNLPSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMA 191

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKI-GLDVDKLESGISSSNEDAGTTGGKI 1313
            SLGS +ELVKCLECSERGRKV G++G RK + ++  +DVD   +GISS N D        
Sbjct: 192  SLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVD---AGISS-NRDVVLDSVVA 247

Query: 1312 KDFSLGANGSND---SGHLSNDTPKELENGGYEIEKTEEDEVLVQD-------------- 1184
            +D  +  +  +D   +G    DT  E+     + E   E+ + VQD              
Sbjct: 248  EDVEVSLSRGDDDHLNGESGIDTKGEVLVDSTDPETGIENVIPVQDEDMPLNGESVNNSD 307

Query: 1183 -VNQEEAKAIKMSXXXXXXXXXXXXXR----ILKYYQGTHNFHNFTTRTKAEDPAARRYI 1019
             V +E+   +  S                  IL ++ GTHNFHNFTTRTKA+DPAARRYI
Sbjct: 308  IVEEEKMNGVDKSTGGSRFCYGEKERERFNKILNFFVGTHNFHNFTTRTKAQDPAARRYI 367

Query: 1018 ISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVN 839
            ISF+A TTV VEGIEFVKCEVVGQSFMLHQIRKM+GLAVAIMRN APESLI  A QQDVN
Sbjct: 368  ISFNANTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLINKALQQDVN 427

Query: 838  INVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKE 659
            INVP APEVGLYLDECFFSSYNQKWKDSHE +SM+ Y +EAE+FKM+YIYSHI+STE KE
Sbjct: 428  INVPTAPEVGLYLDECFFSSYNQKWKDSHEVVSMKAYEKEAEEFKMKYIYSHISSTEQKE 487

Query: 658  GVVALWLHSLNYRNYPDLRFI 596
            G VALWLHSLN+RNYPDL  +
Sbjct: 488  GTVALWLHSLNHRNYPDLHVV 508


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
            gi|557537401|gb|ESR48519.1| hypothetical protein
            CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  613 bits (1581), Expect = e-172
 Identities = 325/505 (64%), Positives = 386/505 (76%), Gaps = 24/505 (4%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            DPK+LKMSA +TS    D++ D +P++A  A +  K+   KRRK+AIF AYCGVGYQGMQ
Sbjct: 23   DPKRLKMSATSTS----DDERDLIPAAAG-ADSTTKRQLCKRRKIAIFFAYCGVGYQGMQ 77

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEALFH+GAV E+DRG P+R+DWARSARTDKGVSAVGQVVSGRF +DP
Sbjct: 78   KNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDKGVSAVGQVVSGRFCIDP 137

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PGLV+RLNS LP QIRIFGYKRVTASFNAKKFCD+RRYVYL+PVFALD S HRDRESV+A
Sbjct: 138  PGLVERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFALDSSSHRDRESVMA 197

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKF-------DSKIGLDVD-KLESGISSSNEDA 1334
            SLGS +ELVKCLECSERGRKV G+MGKR +       D    L+   K+++ +S+ N D 
Sbjct: 198  SLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQVKVDTVVSTCNGDR 257

Query: 1333 GTT-------GGKIKDFSLGANGSNDS-------GHLSNDTPKELENGGYEIEKTEEDEV 1196
              T          I +  +  N +++S          S     E  +   +++   + +V
Sbjct: 258  HNTNLESVESNKTISESVMVENANSESVNETLVESRTSETVQNENTDLSLDLDSKNDSKV 317

Query: 1195 LVQD--VNQEEAKAIKMSXXXXXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRY 1022
            + ++  VN EE K +K S             RILK+Y G+HNFHNFTTRTKAEDP+ARRY
Sbjct: 318  MAEERSVNGEE-KLLKGSGFCYGEEEKKRFNRILKHYVGSHNFHNFTTRTKAEDPSARRY 376

Query: 1021 IISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDV 842
            IISF A + VNVEGI+F+KCEVVGQSFMLHQIRKMIGLAVA++RN APESLIETA Q+DV
Sbjct: 377  IISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVRNCAPESLIETALQKDV 436

Query: 841  NINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHK 662
            NINVP APEVGLYLDEC F+SYN+KWKDSHEELSM+ Y EEAE+FKM++I+SHIA TE K
Sbjct: 437  NINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAENFKMKHIFSHIARTEQK 496

Query: 661  EGVVALWLHSLNYRNYPDLRFIKNN 587
            EGVVALWLHSLNYRNYPDLRF+ N+
Sbjct: 497  EGVVALWLHSLNYRNYPDLRFLGND 521


>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|593783723|ref|XP_007154902.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028254|gb|ESW26894.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028256|gb|ESW26896.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 586

 Score =  612 bits (1578), Expect = e-172
 Identities = 324/499 (64%), Positives = 366/499 (73%), Gaps = 21/499 (4%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            +PKKLKMS      TSDDE+  T P +         K RYKRRK+AIF AYCGVGYQGMQ
Sbjct: 25   EPKKLKMST-----TSDDEECTTAPGA---------KKRYKRRKIAIFFAYCGVGYQGMQ 70

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEAL+ +GAVPE DRG PKR+DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 71   KNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 130

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PGLV RLNS L  QIRIFGYKRVT SFNAKKFCDRRRYVYLIPVFALDP CHRDRE+V+A
Sbjct: 131  PGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPCCHRDRETVMA 190

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNE---DAGTTGG 1319
            SLGS +ELVKCLECSERGRKV G++G RK +  + L+   +E+GISS+ +   D+  TG 
Sbjct: 191  SLGSTNELVKCLECSERGRKVVGLVGNRKHN--LELEAMDVEAGISSNTDVVLDSVVTGD 248

Query: 1318 KIKDFSLG------------------ANGSNDSGHLSNDTPKELENGGYEIEKTEEDEVL 1193
                 S G                   +G+N    +    P + E      E     +++
Sbjct: 249  VEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEKGIPVQDEVMPLNGESVNNSDII 308

Query: 1192 VQDVNQEEAKAIKMSXXXXXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIIS 1013
             ++    E K+   S             +IL  + GTHNFHNFTTRTKAEDPAARRYIIS
Sbjct: 309  EEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFVGTHNFHNFTTRTKAEDPAARRYIIS 368

Query: 1012 FDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNIN 833
            F+A T   VEGIEFVKCEVVGQSFMLHQIRKM+GLAVAIMRN APESLI  A QQDVNIN
Sbjct: 369  FNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLINKALQQDVNIN 428

Query: 832  VPMAPEVGLYLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGV 653
            VP APEVGLYLDECFFSSYNQKWKDSHEELSM+ Y +EAE+FKM+YIYSHI+ TE KEG 
Sbjct: 429  VPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEEFKMKYIYSHISFTEQKEGT 488

Query: 652  VALWLHSLNYRNYPDLRFI 596
            VALWLHSLN+RNYPDLR +
Sbjct: 489  VALWLHSLNHRNYPDLRVV 507


>ref|XP_012073705.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Jatropha curcas] gi|643728920|gb|KDP36857.1|
            hypothetical protein JCGZ_08148 [Jatropha curcas]
          Length = 539

 Score =  611 bits (1576), Expect = e-172
 Identities = 337/519 (64%), Positives = 373/519 (71%), Gaps = 44/519 (8%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            +P+  K   +TT  TSDDE+      +A    T  KK RYKRRK+AIF AYCGVGYQGMQ
Sbjct: 17   EPEHKKPRMSTT--TSDDEE------TALGDTTATKKLRYKRRKIAIFFAYCGVGYQGMQ 68

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEALF +GAVPE DRG PKR+DWARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 69   KNPGAKTIEGDLEEALFQSGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 128

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PGLV+RLNS L  QIRIFGYKRVT SFNAKKFCDRRRYVYLIPVFALDPS HRDRESVLA
Sbjct: 129  PGLVERLNSNLSSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDPSSHRDRESVLA 188

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIK 1310
            SLGS +ELVKC ECSERGRKV G +G R F+SK  +      + ISS++ DA       +
Sbjct: 189  SLGSGNELVKCWECSERGRKVIGAVGNRSFESKSFVS----HTSISSNDGDAIVKSEIKE 244

Query: 1309 DFSLGANGSNDSGHLSNDT-------------------PKE---LENGGYEIEKTEEDEV 1196
            D S+ A+ + D G   N                     PK    L N G   +    +E+
Sbjct: 245  DTSVTADNAADDGDNINAEFAEEAKVSENNCAQTQSAIPKSRILLNNIGANTKPDTTEEL 304

Query: 1195 LV-----QDVNQE-----------------EAKAIKMSXXXXXXXXXXXXXRILKYYQGT 1082
            +V      DVN +                 E + ++ S             RIL YY G+
Sbjct: 305  MVPVDHADDVNAKSERLGDDLKVGEEKVDGEEQVMEGSVFCYGEKEKERFNRILSYYVGS 364

Query: 1081 HNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAV 902
            HNFHNFTTRTKAEDPAARRYIISFDAKTTV VEGIEFVKCEVVGQSFMLHQIRKMIG+AV
Sbjct: 365  HNFHNFTTRTKAEDPAARRYIISFDAKTTVTVEGIEFVKCEVVGQSFMLHQIRKMIGVAV 424

Query: 901  AIMRNIAPESLIETAFQQDVNINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMQTYAE 722
            AIMRN APESLI TA Q+DVNINVP APEVGLYLDECFF+SYNQKWKDSHEELSM+ Y E
Sbjct: 425  AIMRNCAPESLISTALQKDVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKVYEE 484

Query: 721  EAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRNYPDL 605
             AEDFK+ YIYSHIASTEHKEG VALWLHSLN+RNYPDL
Sbjct: 485  VAEDFKVTYIYSHIASTEHKEGTVALWLHSLNHRNYPDL 523


>ref|XP_010266077.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X2
            [Nelumbo nucifera]
          Length = 475

 Score =  609 bits (1571), Expect = e-171
 Identities = 321/480 (66%), Positives = 367/480 (76%), Gaps = 12/480 (2%)
 Frame = -2

Query: 2005 AATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQKNPGAKTI 1826
            ++TT+ TSDDE+ +  P+SA    T Q+K RYKRRKVAIF AYCGVGYQGMQKNPGAKTI
Sbjct: 2    SSTTTTTSDDEEYEINPNSADT--TTQRKRRYKRRKVAIFFAYCGVGYQGMQKNPGAKTI 59

Query: 1825 EGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDPPGLVQRLN 1646
            EGDLEEAL+ +GAVPE DRG PKRFDWARSARTDKGVSAVGQVVSGRFY+DPPGLV RLN
Sbjct: 60   EGDLEEALYLSGAVPEVDRGNPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLN 119

Query: 1645 SILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLASLGSKDEL 1466
            S LP QIRIFG+KRVT+SFNAKKFCDRRRYVYLIPVFALDPS HRDRESVLASLGS++EL
Sbjct: 120  SNLPSQIRIFGFKRVTSSFNAKKFCDRRRYVYLIPVFALDPSSHRDRESVLASLGSENEL 179

Query: 1465 VKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIKDFSLGAN- 1289
            VKCLECSERGRKV G+MG+R  +SK       +E+G + +++   T+   I   S     
Sbjct: 180  VKCLECSERGRKVAGVMGRRNSESK------NVENGGNDASQSGLTSDNVITVLSHSETK 233

Query: 1288 -----GSNDSGHLSNDTPK------ELENGGYEIEKTEEDEVLVQDVNQEEAKAIKMSXX 1142
                  S D+  LSN            +N        + D+ LV+  N   A A+K    
Sbjct: 234  IEPEVSSIDAVALSNFALAVDPCLVSSDNSAAAPHPEQADQNLVRCGNGGGA-AVKGRVF 292

Query: 1141 XXXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKC 962
                       RILK+Y+GTHNFHNFTTRTK EDP+A RYI+SFDA   V VEGI+FVKC
Sbjct: 293  CYGEKEKERFNRILKHYEGTHNFHNFTTRTKVEDPSANRYIVSFDANKVVTVEGIDFVKC 352

Query: 961  EVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVGLYLDECFFS 782
            EVVGQSFMLHQIRKM+GLAVA+MRN APESLI  A Q+D+NINVP APEVGLYLDEC F+
Sbjct: 353  EVVGQSFMLHQIRKMVGLAVAVMRNCAPESLINIALQKDININVPTAPEVGLYLDECLFT 412

Query: 781  SYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRNYPDLR 602
            SYNQKWKDSHEE+SM+ Y EEAEDFK+Q IY+HI+ TE KEGVVALWLHSLN+RNYPDLR
Sbjct: 413  SYNQKWKDSHEEISMEAYKEEAEDFKIQQIYTHISFTEQKEGVVALWLHSLNHRNYPDLR 472


>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Citrus
            sinensis]
          Length = 526

 Score =  609 bits (1570), Expect = e-171
 Identities = 322/505 (63%), Positives = 384/505 (76%), Gaps = 24/505 (4%)
 Frame = -2

Query: 2029 DPKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQ 1850
            DPK+LKMSA TTS    D++ D +P++A  A +  K+   KRRK+AIF AYCGVGYQGMQ
Sbjct: 23   DPKRLKMSATTTS----DDERDLIPAAAG-ADSTTKRQLCKRRKIAIFFAYCGVGYQGMQ 77

Query: 1849 KNPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDP 1670
            KNPGAKTIEGDLEEALFH+GAV E+DRG P+R+DWARSARTDKGVSAVGQVVSGRF +DP
Sbjct: 78   KNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDKGVSAVGQVVSGRFCIDP 137

Query: 1669 PGLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 1490
            PGLV+RLN  LP QIRIFGYKRVTASFNAKKFCD+RRYVYL+PVFALD S HRDRESV+A
Sbjct: 138  PGLVERLNYNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFALDSSSHRDRESVMA 197

Query: 1489 SLGSKDELVKCLECSERGRKVEGIMGKRKF-------DSKIGLDVD-KLESGISSSNEDA 1334
            SLGS +ELVKCLECSERGRKV G+MGKR +       D    L+   K+++ +S+ N D 
Sbjct: 198  SLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQVKVDTVVSTCNGDR 257

Query: 1333 GTT-------GGKIKDFSLGANGSNDS-------GHLSNDTPKELENGGYEIEKTEEDEV 1196
              T          I + ++  N +++S          S     E  +   +++   + +V
Sbjct: 258  HNTNLESVESNKTISESAMVENANSESVNETLVESRTSETVQNENTDLSLDLDSKNDSKV 317

Query: 1195 LVQD--VNQEEAKAIKMSXXXXXXXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRY 1022
            + ++  VN EE K +K S             RILK+Y G+HNFHNFTTRTKAEDP+ARRY
Sbjct: 318  MAEERSVNGEE-KLLKGSGFCYGEEEKKRFNRILKHYVGSHNFHNFTTRTKAEDPSARRY 376

Query: 1021 IISFDAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDV 842
            IISF A + VNVEGI+F+KCEVVGQSFMLHQIRKMIGLAVA++RN AP+SLIETA Q+DV
Sbjct: 377  IISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVRNCAPQSLIETALQKDV 436

Query: 841  NINVPMAPEVGLYLDECFFSSYNQKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHK 662
            NINVP APEVGLYLDEC F+SYN+KWKDSHEELSM+ Y EEAE+FKM++I+SHI  TE K
Sbjct: 437  NINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAENFKMKHIFSHITRTEQK 496

Query: 661  EGVVALWLHSLNYRNYPDLRFIKNN 587
            EGVVALWLHSLNYRNYPDL F+ N+
Sbjct: 497  EGVVALWLHSLNYRNYPDLHFLGND 521


>ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Solanum
            tuberosum]
          Length = 569

 Score =  607 bits (1564), Expect = e-170
 Identities = 313/479 (65%), Positives = 367/479 (76%), Gaps = 2/479 (0%)
 Frame = -2

Query: 2026 PKKLKMSAATTSATSDDEDIDTVPSSAQEAPTPQKKPRYKRRKVAIFLAYCGVGYQGMQK 1847
            PKKLKMS   T+ TSDDE+     + A +   P++KPRYKRRKVAIF AYCGVGYQGMQK
Sbjct: 16   PKKLKMS---TTTTSDDEEY---AAGAGDGSAPERKPRYKRRKVAIFFAYCGVGYQGMQK 69

Query: 1846 NPGAKTIEGDLEEALFHAGAVPEQDRGCPKRFDWARSARTDKGVSAVGQVVSGRFYVDPP 1667
            NPGAKTIEGDLEEAL+ AG VP+ D+  P++++WARSARTDKGVSAVGQVVSGRFYVDPP
Sbjct: 70   NPGAKTIEGDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVSAVGQVVSGRFYVDPP 129

Query: 1666 GLVQRLNSILPPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRESVLAS 1487
            G + RLNSIL PQIRIFG+KRVT +F+AKKFCD+RRYVYL+PVFALDP  HRDRESVLAS
Sbjct: 130  GFIDRLNSILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFALDPYAHRDRESVLAS 189

Query: 1486 LGSKDELVKCLECSERGRKVEGIMGKRKFDSKIGLDVDKLESGISSSNEDAGTTGGKIKD 1307
            LGS  EL KCL C ERGRKV G+MG+R FD  I   V  +++ + ++N+           
Sbjct: 190  LGSGKELAKCLNCPERGRKVVGVMGRRVFD-PITQSVIIVDAPVVNANDP---------- 238

Query: 1306 FSLGANGSNDSGHLSNDTPKELENGGYEIEKTEE--DEVLVQDVNQEEAKAIKMSXXXXX 1133
                          + DT   +EN     EK EE   EV   + N +  + ++ S     
Sbjct: 239  --------------TTDTNMVIENEASLSEKVEERNGEVEGSNENAKMEEQVEESVFCYG 284

Query: 1132 XXXXXXXXRILKYYQGTHNFHNFTTRTKAEDPAARRYIISFDAKTTVNVEGIEFVKCEVV 953
                    RILKYY+GTHNFHNFTTRTKA+DPAA+RYIISF+A T VNV+GI+FVKCEVV
Sbjct: 285  EKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFNANTVVNVDGIDFVKCEVV 344

Query: 952  GQSFMLHQIRKMIGLAVAIMRNIAPESLIETAFQQDVNINVPMAPEVGLYLDECFFSSYN 773
            GQSFMLHQIRKMIGLAVAIMRN APESLI TAF++DVNINVPMAPEVGLYLDECFF+SYN
Sbjct: 345  GQSFMLHQIRKMIGLAVAIMRNCAPESLIVTAFRRDVNINVPMAPEVGLYLDECFFTSYN 404

Query: 772  QKWKDSHEELSMQTYAEEAEDFKMQYIYSHIASTEHKEGVVALWLHSLNYRNYPDLRFI 596
             KWKD+HEE+S++ Y EEAE+FKM+YIYSHIASTE KEG +A+WLHSLN+RNYPDLR +
Sbjct: 405  SKWKDTHEEVSLKAYLEEAEEFKMKYIYSHIASTEQKEGTMAVWLHSLNHRNYPDLRAV 463