BLASTX nr result
ID: Gardenia21_contig00001950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Gardenia21_contig00001950
(1471 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP05351.1| unnamed protein product [Coffea canephora] 626 e-176
ref|XP_009607009.1| PREDICTED: DNA-directed RNA polymerase III s... 358 5e-96
ref|XP_009607010.1| PREDICTED: DNA-directed RNA polymerase III s... 358 9e-96
ref|XP_009784283.1| PREDICTED: DNA-directed RNA polymerase III s... 354 1e-94
ref|XP_009784284.1| PREDICTED: DNA-directed RNA polymerase III s... 353 2e-94
ref|XP_011076392.1| PREDICTED: DNA-directed RNA polymerase III s... 350 2e-93
ref|XP_010321476.1| PREDICTED: DNA-directed RNA polymerase III s... 349 4e-93
ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III s... 338 9e-90
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera] 297 1e-77
ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260... 295 5e-77
ref|XP_012090466.1| PREDICTED: DNA-directed RNA polymerase III s... 294 2e-76
gb|KDP22444.1| hypothetical protein JCGZ_26275 [Jatropha curcas] 294 2e-76
ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu... 290 2e-75
ref|XP_010035038.1| PREDICTED: DNA-directed RNA polymerase III s... 284 2e-73
ref|XP_007038340.1| DNA binding protein, putative isoform 2 [The... 282 5e-73
ref|XP_012090467.1| PREDICTED: DNA-directed RNA polymerase III s... 273 4e-70
ref|XP_012852318.1| PREDICTED: uncharacterized protein LOC105971... 272 6e-70
gb|KHG22798.1| DNA-directed RNA polymerase III subunit RPC4 [Gos... 268 7e-69
ref|XP_012466685.1| PREDICTED: DNA-directed RNA polymerase III s... 268 9e-69
ref|XP_012466695.1| PREDICTED: DNA-directed RNA polymerase III s... 261 9e-67
>emb|CDP05351.1| unnamed protein product [Coffea canephora]
Length = 380
Score = 626 bits (1615), Expect = e-176
Identities = 323/380 (85%), Positives = 337/380 (88%), Gaps = 7/380 (1%)
Frame = -2
Query: 1284 MDSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHL 1105
M+ +LSPSTPR+VKFAPKGPPPRRKSTPLQPKTEVA E+NESLLRKVNEHL
Sbjct: 1 MEPNLSPSTPRRVKFAPKGPPPRRKSTPLQPKTEVAGGGDHGGDD-EINESLLRKVNEHL 59
Query: 1104 TRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSL 925
TRR PQAEKKSSVQVAFSHGVASSTSLRTYG AKE SGDRSNGTG+RDSAADTR DIHSL
Sbjct: 60 TRRWPQAEKKSSVQVAFSHGVASSTSLRTYGSAKEGSGDRSNGTGLRDSAADTRGDIHSL 119
Query: 924 PSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDREE 745
PST K DWMVESSEDAT +SFK KK+EYKEPWDYNHSYYP LPIRRPYSGDPEVLDREE
Sbjct: 120 PSTSKIDWMVESSEDATVTSFKQKKREYKEPWDYNHSYYPVALPIRRPYSGDPEVLDREE 179
Query: 744 FGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGT----- 580
FG AKAASEYDES+IHSASDLGLLEE DG KMLFLQFPANLP VK ESGP STGT
Sbjct: 180 FGEAKAASEYDESAIHSASDLGLLEEVDGEKMLFLQFPANLPFVKRESGPGSTGTSEHAS 239
Query: 579 -SMNHKQRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSS-VGTNKNVC 406
S+NHK RAGSSRPGGSVAPT AKGKEIPGSFPMVS D KGKEIVNSS+SS VGTNKNVC
Sbjct: 240 ASVNHKHRAGSSRPGGSVAPTTAKGKEIPGSFPMVSGDAKGKEIVNSSVSSVVGTNKNVC 299
Query: 405 SLEELPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEV 226
SLEELP GFMGKILVFKSGAVKLKLGDMLYDVSPGS+C F QDIVAINTSDK CCNLGEV
Sbjct: 300 SLEELPPGFMGKILVFKSGAVKLKLGDMLYDVSPGSNCTFAQDIVAINTSDKHCCNLGEV 359
Query: 225 NKRAIVTPDIDYLLEPVIYL 166
+KRA+VTPDID+LL PVIYL
Sbjct: 360 SKRAVVTPDIDHLLTPVIYL 379
>ref|XP_009607009.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like isoform
X1 [Nicotiana tomentosiformis]
Length = 358
Score = 358 bits (920), Expect = 5e-96
Identities = 201/374 (53%), Positives = 255/374 (68%), Gaps = 7/374 (1%)
Frame = -2
Query: 1284 MDSDLSPSTP--RKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNE 1111
MD DL S P RKVKFAPK PP R+K P+QPKTE +E E++ R+VNE
Sbjct: 1 MDPDLPSSPPKTRKVKFAPKAPPRRKKQNPVQPKTEA--DGNEDTNDNEAAEAIRRRVNE 58
Query: 1110 HLTRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIH 931
LTR+ P+ EKK+ V+VAFSHGVAS TS+RT+G KE + + G+ V+D +D R DI
Sbjct: 59 RLTRQKPKTEKKA-VEVAFSHGVASPTSIRTFGKPKELTVNW--GSTVKDPESDDRMDID 115
Query: 930 S---LPSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEV 760
S LPS+I +D + E S + + FK KKKEYKEPWDY+H+ YP TLP+RRPY+G+PE+
Sbjct: 116 SSPPLPSSIGAD-LAEISVSNSDALFKRKKKEYKEPWDYHHTNYPITLPLRRPYAGNPEI 174
Query: 759 LDREEFGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGT 580
LD EFG A +EYDE++IH AS+LGLLE+ D V++LFLQ PANLP + + G D+
Sbjct: 175 LDEAEFGKAAVNAEYDENNIHPASELGLLEKKDDVQILFLQLPANLP-LATKGGRDT--- 230
Query: 579 SMNHKQRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSS--VGTNKNVC 406
G ++ M KGKE G+ P + KGKEIV+SS S T K C
Sbjct: 231 -------------AGCLSSPMLKGKEATGTAPRLLASAKGKEIVDSSTISRRHNTAKEAC 277
Query: 405 SLEELPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEV 226
SLE LP+G MGK+LV+KSGA+KLKLGD+LYDVSPG DC F QD+VAINT +K CC LGE+
Sbjct: 278 SLEGLPAGNMGKMLVYKSGAIKLKLGDILYDVSPGVDCSFSQDVVAINTVEKHCCQLGEI 337
Query: 225 NKRAIVTPDIDYLL 184
KRA+VTPD+D+LL
Sbjct: 338 GKRAVVTPDVDFLL 351
>ref|XP_009607010.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like isoform
X2 [Nicotiana tomentosiformis]
Length = 357
Score = 358 bits (918), Expect = 9e-96
Identities = 201/374 (53%), Positives = 254/374 (67%), Gaps = 7/374 (1%)
Frame = -2
Query: 1284 MDSDLSPSTP--RKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNE 1111
MD DL S P RKVKFAPK PP R+K P+QPKTE +E E++ R+VNE
Sbjct: 1 MDPDLPSSPPKTRKVKFAPKAPPRRKKQNPVQPKTEA--DGNEDTNDNEAAEAIRRRVNE 58
Query: 1110 HLTRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIH 931
LTR+ P+ EKK V+VAFSHGVAS TS+RT+G KE + + G+ V+D +D R DI
Sbjct: 59 RLTRQKPKTEKK--VEVAFSHGVASPTSIRTFGKPKELTVNW--GSTVKDPESDDRMDID 114
Query: 930 S---LPSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEV 760
S LPS+I +D + E S + + FK KKKEYKEPWDY+H+ YP TLP+RRPY+G+PE+
Sbjct: 115 SSPPLPSSIGAD-LAEISVSNSDALFKRKKKEYKEPWDYHHTNYPITLPLRRPYAGNPEI 173
Query: 759 LDREEFGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGT 580
LD EFG A +EYDE++IH AS+LGLLE+ D V++LFLQ PANLP + + G D+
Sbjct: 174 LDEAEFGKAAVNAEYDENNIHPASELGLLEKKDDVQILFLQLPANLP-LATKGGRDT--- 229
Query: 579 SMNHKQRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSS--VGTNKNVC 406
G ++ M KGKE G+ P + KGKEIV+SS S T K C
Sbjct: 230 -------------AGCLSSPMLKGKEATGTAPRLLASAKGKEIVDSSTISRRHNTAKEAC 276
Query: 405 SLEELPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEV 226
SLE LP+G MGK+LV+KSGA+KLKLGD+LYDVSPG DC F QD+VAINT +K CC LGE+
Sbjct: 277 SLEGLPAGNMGKMLVYKSGAIKLKLGDILYDVSPGVDCSFSQDVVAINTVEKHCCQLGEI 336
Query: 225 NKRAIVTPDIDYLL 184
KRA+VTPD+D+LL
Sbjct: 337 GKRAVVTPDVDFLL 350
>ref|XP_009784283.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like isoform
X1 [Nicotiana sylvestris]
Length = 356
Score = 354 bits (908), Expect = 1e-94
Identities = 198/374 (52%), Positives = 254/374 (67%), Gaps = 7/374 (1%)
Frame = -2
Query: 1284 MDSDLSPSTP--RKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNE 1111
MD DL S P RKVKFAPK PP R+K +Q KTE +E E++L +VNE
Sbjct: 1 MDPDLPSSPPKTRKVKFAPKAPPRRKKQNSVQHKTEA--DRNEDTNDNEAAEAILHRVNE 58
Query: 1110 HLTRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIH 931
LTR+ P+ EKK+ V+VAF+HGVAS TS+RT+G KE + +R G+ V+D +D R DI
Sbjct: 59 RLTRQKPKTEKKA-VEVAFAHGVASPTSIRTFGKPKELAINR--GSTVKDPESDDRMDID 115
Query: 930 S---LPSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEV 760
S LPS+I++D + E S + + K KKKEYKEPWDY+H+ YP TLP+RRPY+GDPE+
Sbjct: 116 SSPPLPSSIEAD-LAEISVSNSDALLKRKKKEYKEPWDYHHTNYPITLPLRRPYAGDPEI 174
Query: 759 LDREEFGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGT 580
LD EFG A A +EYDE++IH AS+LGLLE+ D V++LFLQ P NLP + + G D+
Sbjct: 175 LDEAEFGKAAANAEYDENNIHPASELGLLEKKDDVQILFLQLPVNLP-LATKGGRDT--- 230
Query: 579 SMNHKQRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSS--VGTNKNVC 406
G + M KGKE G+ P + KGKEIV+SS S T K C
Sbjct: 231 -------------AGCLPSPMLKGKEAAGTAPRLLASAKGKEIVDSSTISRRHNTAKEAC 277
Query: 405 SLEELPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEV 226
+LE+LP+G MGK+LV+KSGA+KLKLGD+LYDVSPG DC F QD+VAINT +K CC LGE+
Sbjct: 278 NLEKLPAGNMGKMLVYKSGAIKLKLGDILYDVSPGVDCSFSQDVVAINTVEKHCCQLGEI 337
Query: 225 NKRAIVTPDIDYLL 184
KRA+VTPD+D+LL
Sbjct: 338 GKRAVVTPDVDFLL 351
>ref|XP_009784284.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like isoform
X2 [Nicotiana sylvestris]
Length = 355
Score = 353 bits (906), Expect = 2e-94
Identities = 198/374 (52%), Positives = 253/374 (67%), Gaps = 7/374 (1%)
Frame = -2
Query: 1284 MDSDLSPSTP--RKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNE 1111
MD DL S P RKVKFAPK PP R+K +Q KTE +E E++L +VNE
Sbjct: 1 MDPDLPSSPPKTRKVKFAPKAPPRRKKQNSVQHKTEA--DRNEDTNDNEAAEAILHRVNE 58
Query: 1110 HLTRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIH 931
LTR+ P+ EKK V+VAF+HGVAS TS+RT+G KE + +R G+ V+D +D R DI
Sbjct: 59 RLTRQKPKTEKK--VEVAFAHGVASPTSIRTFGKPKELAINR--GSTVKDPESDDRMDID 114
Query: 930 S---LPSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEV 760
S LPS+I++D + E S + + K KKKEYKEPWDY+H+ YP TLP+RRPY+GDPE+
Sbjct: 115 SSPPLPSSIEAD-LAEISVSNSDALLKRKKKEYKEPWDYHHTNYPITLPLRRPYAGDPEI 173
Query: 759 LDREEFGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGT 580
LD EFG A A +EYDE++IH AS+LGLLE+ D V++LFLQ P NLP + + G D+
Sbjct: 174 LDEAEFGKAAANAEYDENNIHPASELGLLEKKDDVQILFLQLPVNLP-LATKGGRDT--- 229
Query: 579 SMNHKQRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSS--VGTNKNVC 406
G + M KGKE G+ P + KGKEIV+SS S T K C
Sbjct: 230 -------------AGCLPSPMLKGKEAAGTAPRLLASAKGKEIVDSSTISRRHNTAKEAC 276
Query: 405 SLEELPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEV 226
+LE+LP+G MGK+LV+KSGA+KLKLGD+LYDVSPG DC F QD+VAINT +K CC LGE+
Sbjct: 277 NLEKLPAGNMGKMLVYKSGAIKLKLGDILYDVSPGVDCSFSQDVVAINTVEKHCCQLGEI 336
Query: 225 NKRAIVTPDIDYLL 184
KRA+VTPD+D+LL
Sbjct: 337 GKRAVVTPDVDFLL 350
>ref|XP_011076392.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like [Sesamum
indicum] gi|747059973|ref|XP_011076393.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc4-like
[Sesamum indicum] gi|747059975|ref|XP_011076394.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc4-like [Sesamum indicum]
Length = 366
Score = 350 bits (897), Expect = 2e-93
Identities = 197/379 (51%), Positives = 258/379 (68%), Gaps = 6/379 (1%)
Frame = -2
Query: 1284 MDSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHL 1105
MD D STPRKVKFAPKGPP RR PL K+E A + + L RKV+EHL
Sbjct: 1 MDPDPPSSTPRKVKFAPKGPP-RRAPQPLTAKSETAAQDDSDDE--QTQQFLTRKVHEHL 57
Query: 1104 TRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSL 925
TRR + EKKSS QVAFSHGVA++T +RT+G +E +GDR++ + A ++ +
Sbjct: 58 TRRGSKVEKKSSAQVAFSHGVAANT-IRTFGKPRERTGDRADAADSNEPAISDDQNLVAS 116
Query: 924 PSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDREE 745
ST ++ + E++ + + KK+EYKEPWDY HSYYPTTLP RRPYSGDPE LD+EE
Sbjct: 117 VSTAGTEGVDENTASSADALVVKKKREYKEPWDYKHSYYPTTLPWRRPYSGDPEKLDKEE 176
Query: 744 FGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNHK 565
F + ASEYDE+++ SASDLGLL + D +MLF QFP NLP + ++G + T+ + K
Sbjct: 177 F---EEASEYDENNLSSASDLGLLGQDDTQRMLFFQFPPNLPLGRRQTGTNKRDTANDLK 233
Query: 564 QRAGSSRPGGSVAPTMAKGKEIPGSFPMVS---VDTKGKEIVNSSMSSVG---TNKNVCS 403
V +KGKEI G P VS + TKGK+I +S++ V +NK CS
Sbjct: 234 ALECG------VFSAASKGKEIVGCGPRVSGISMGTKGKDIAPNSINLVSGHPSNKG-CS 286
Query: 402 LEELPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVN 223
LEELP G+MGK+LV+KSGAVKLKLGD+LYDVSPGSDC F Q ++AI+T+++DCC+LG +N
Sbjct: 287 LEELPEGYMGKMLVYKSGAVKLKLGDILYDVSPGSDCTFAQSVMAIDTTNRDCCDLGALN 346
Query: 222 KRAIVTPDIDYLLEPVIYL 166
KRA+VTPDID+L++ VI L
Sbjct: 347 KRAVVTPDIDFLVDNVIDL 365
>ref|XP_010321476.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Solanum
lycopersicum]
Length = 371
Score = 349 bits (895), Expect = 4e-93
Identities = 190/371 (51%), Positives = 252/371 (67%), Gaps = 5/371 (1%)
Frame = -2
Query: 1281 DSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHLT 1102
D LS S+ RKVKFAPKGPP R+K P QPK E +E E++LRKVNE LT
Sbjct: 4 DLPLSSSSTRKVKFAPKGPPRRKKQNPAQPKNEA--DGNEDRDDNEAAEAVLRKVNERLT 61
Query: 1101 RRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSLP 922
R+ P+ EKK V+VAF+HGVAS TS +T G ++E + ++ + ++D+ + DI SLP
Sbjct: 62 RQKPKTEKK--VEVAFAHGVASPTSTKTSGKSRELTVNQDST--LKDNESCDNMDIDSLP 117
Query: 921 STIKSDW--MVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDRE 748
+ S + E S + + S K +KKEYKEPWDY+HS YP TLP+RRPY+GDPE+L+
Sbjct: 118 TLPSSTGPDLAEMSVNNSDSLLK-RKKEYKEPWDYHHSNYPVTLPLRRPYAGDPEILNEA 176
Query: 747 EFGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNH 568
EFG A +EYDE++I+ AS+LGLLE+ D V++LFLQ PANLP K ++ T+++
Sbjct: 177 EFGEAAKNAEYDENNINPASELGLLEKKDDVQLLFLQLPANLPLSKLQASTGGRDTAVSL 236
Query: 567 KQRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSS---VGTNKNVCSLE 397
S +++ M KGKE+ GS P KGKEI +SS S T VCSL+
Sbjct: 237 TLPGDKSDKAATLSSPMLKGKEVAGSAPRFLASAKGKEISDSSTISRRHNNTTNKVCSLQ 296
Query: 396 ELPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNKR 217
ELP+G MGK+LV+KSGA+KLKLGD+LYDVSPG +C F QD+VAINT++K CC LGE+ KR
Sbjct: 297 ELPAGSMGKMLVYKSGAIKLKLGDILYDVSPGVECSFSQDVVAINTAEKQCCQLGELGKR 356
Query: 216 AIVTPDIDYLL 184
A+VTPD+D+LL
Sbjct: 357 AVVTPDVDFLL 367
>ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like [Solanum
tuberosum]
Length = 368
Score = 338 bits (866), Expect = 9e-90
Identities = 186/371 (50%), Positives = 248/371 (66%), Gaps = 5/371 (1%)
Frame = -2
Query: 1281 DSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHLT 1102
D LS S+ RKVKFAPKGPP R+K P QPK E +E E++LRKVNE LT
Sbjct: 4 DLPLSSSSTRKVKFAPKGPPRRKKQNPAQPKNEA--DGNEDRDDNEAAEAILRKVNERLT 61
Query: 1101 RRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSLP 922
R+ P+ EKK V+VAF+HGVAS TS +T+G ++E + ++ + ++D+ + DI SLP
Sbjct: 62 RQKPKTEKK--VEVAFTHGVASPTSTKTFGKSRELTVNQDST--LKDNESCDNMDIDSLP 117
Query: 921 STIKSDW--MVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDRE 748
+ S + E S + + S K +KKEYKEPWDY+HS YP TLP+RRPY+GDPE+L+
Sbjct: 118 TLPSSTGPDLAEMSVNNSDSLLK-RKKEYKEPWDYHHSNYPVTLPLRRPYAGDPEILNEA 176
Query: 747 EFGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNH 568
EFG A + YDE++I+ AS+LGLLE+ D V++LFLQ PANLP K ++ T++
Sbjct: 177 EFGEAAKNAVYDENNINPASELGLLEKKDDVQLLFLQLPANLPLSKLQASTGGRDTAVCL 236
Query: 567 KQRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNS---SMSSVGTNKNVCSLE 397
S +++ M KGKE+ GS KGKEI +S S T CSL+
Sbjct: 237 TLPGDKSDKAATLSSPMLKGKEVAGS---ALAGAKGKEIADSPTISRRHNNTTNKACSLQ 293
Query: 396 ELPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNKR 217
ELP+G MGK+LV+KSGA+KLKLGD+LYDVSPG +C F QD+VAINT++K CC LGE+ KR
Sbjct: 294 ELPAGSMGKMLVYKSGAIKLKLGDILYDVSPGVECSFSQDVVAINTAEKQCCQLGELGKR 353
Query: 216 AIVTPDIDYLL 184
A+VTPD+D+LL
Sbjct: 354 AVVTPDVDFLL 364
>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
Length = 348
Score = 297 bits (761), Expect = 1e-77
Identities = 178/380 (46%), Positives = 231/380 (60%), Gaps = 7/380 (1%)
Frame = -2
Query: 1284 MDSDLSPS-TPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEH 1108
MD + S S +PRKV+FAPK PP RRK P+ VA + + LLR+VNE
Sbjct: 1 MDHNESSSVSPRKVRFAPKSPP-RRKPKTTAPQPVVAEEEDEA----KRAQYLLRRVNEK 55
Query: 1107 LTRRCPQAEKKSSVQVAFSHGVAS-STSLRTYGLAKEASGDRSNGTGVRDSAADTRADIH 931
L R+ P+ EK SSVQV F G A+ S ++RT+G+ ++ + D+S+G ++ S D
Sbjct: 56 LRRQGPKVEKTSSVQVVFGPGAATPSDTIRTFGVHRDGNSDKSSGMELKVSTPDHEEIAV 115
Query: 930 SLPSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDR 751
S ST K D DAT S + +K+ YKEPWDY HSYYPTTLP+R+P+SGDPE+LD
Sbjct: 116 SSXSTTKPDETNGXFADATDDSAQIRKR-YKEPWDYVHSYYPTTLPLRKPHSGDPEILDE 174
Query: 750 EEFGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMN 571
EFG A EYDE +I+ AS+LGLLEE + +M Q PANLP VK +
Sbjct: 175 AEFGEASTNLEYDEKTINPASELGLLEESEKGRMFLFQLPANLPLVKQSAS--------- 225
Query: 570 HKQRAGSSRPGGSVAPTMAKGKEIPG---SFPMVSVDTKGKEIVNSSMSS--VGTNKNVC 406
AKGKEI G S + KGK++ SS+SS +GT+++ C
Sbjct: 226 ------------------AKGKEIVGNSTSLEGIYASAKGKQVARSSLSSKSIGTSEHSC 267
Query: 405 SLEELPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEV 226
LE+L G GK+LV+KSGA+KLKLG++LYDVSPG DC QD+VAINT DK C LGE+
Sbjct: 268 RLEDLAGGHXGKMLVYKSGAIKLKLGEILYDVSPGLDCTCVQDVVAINTVDKHCYALGEL 327
Query: 225 NKRAIVTPDIDYLLEPVIYL 166
KR IVTPD+D LL+ +I L
Sbjct: 328 GKRVIVTPDVDSLLDSMIAL 347
>ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260717 [Vitis vinifera]
gi|297745083|emb|CBI38675.3| unnamed protein product
[Vitis vinifera]
Length = 348
Score = 295 bits (756), Expect = 5e-77
Identities = 177/380 (46%), Positives = 230/380 (60%), Gaps = 7/380 (1%)
Frame = -2
Query: 1284 MDSDLSPS-TPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEH 1108
MD + S S +PRKV+FAPK PP RRK P+ VA + + LLR+VNE
Sbjct: 1 MDHNESSSVSPRKVRFAPKSPP-RRKPKTTAPQPVVAEEEDEA----KRAQYLLRRVNEK 55
Query: 1107 LTRRCPQAEKKSSVQVAFSHGVAS-STSLRTYGLAKEASGDRSNGTGVRDSAADTRADIH 931
L R+ P+ EK SSVQV F G A+ S ++RT+G+ ++ + D+S+G ++ S D
Sbjct: 56 LRRQGPKVEKTSSVQVVFGPGAATPSDTIRTFGVHRDGNSDKSSGMELKVSTPDHEEIAV 115
Query: 930 SLPSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDR 751
S PST K D DAT S + +K+ YKEPWDY HSYYPTTLP+R+P+SGDPE+LD
Sbjct: 116 SSPSTTKPDETNGYFADATDDSAQIRKR-YKEPWDYVHSYYPTTLPLRKPHSGDPEILDE 174
Query: 750 EEFGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMN 571
EFG A EYDE +I+ AS+LGLLEE + +M Q PANLP K
Sbjct: 175 AEFGEASTNLEYDEKTINPASELGLLEESEKGRMFLFQLPANLPLFKQSPS--------- 225
Query: 570 HKQRAGSSRPGGSVAPTMAKGKEI---PGSFPMVSVDTKGKEIVNSSMS--SVGTNKNVC 406
AKGKEI S + KGK++ SS+S S+GT+++ C
Sbjct: 226 ------------------AKGKEIVENSTSLEGIYASAKGKQVARSSLSSKSIGTSEHSC 267
Query: 405 SLEELPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEV 226
LE+L G +GK+LV+KSGA+KLKLG++LYDVSPG DC QD+VAINT DK C LGE+
Sbjct: 268 RLEDLAGGHIGKMLVYKSGAIKLKLGEILYDVSPGLDCTCVQDVVAINTVDKHCYALGEL 327
Query: 225 NKRAIVTPDIDYLLEPVIYL 166
KR IVTPD+D LL+ +I L
Sbjct: 328 GKRVIVTPDVDSLLDSMIAL 347
>ref|XP_012090466.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X1
[Jatropha curcas]
Length = 350
Score = 294 bits (752), Expect = 2e-76
Identities = 169/376 (44%), Positives = 217/376 (57%), Gaps = 2/376 (0%)
Frame = -2
Query: 1284 MDSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHL 1105
MD + TPRK KF PK PP +RK P K+EV + + L+RK NE+L
Sbjct: 20 MDQEQPSPTPRKAKFTPKAPP-QRKPIPTVTKSEVNDSNNDEDEAAQA-QKLMRKFNENL 77
Query: 1104 TRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSL 925
R+ P+ EKKSSVQVAF G A STS+R YG+ + S+ ++DS D R + S
Sbjct: 78 RRKVPKVEKKSSVQVAFGPGAAPSTSIRKYGVPGCENAGSSSRLDIKDSDNDDRRIVVSS 137
Query: 924 PSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDREE 745
ST + D + +A G KK+Y+EPWDYNH+YYPTTLP+RRPYSGDPE+L+ EE
Sbjct: 138 LSTAEEDGASKYHSEAIGVLPLKIKKDYREPWDYNHTYYPTTLPLRRPYSGDPELLNEEE 197
Query: 744 FGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNHK 565
FG A EY+E++I ASDLGLLEE D ++ F Q P+ LP VK
Sbjct: 198 FGEAARKLEYNENTIKPASDLGLLEESDKERLFFFQLPSKLPLVK--------------- 242
Query: 564 QRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSSVGTN--KNVCSLEEL 391
S TKGKE V S S GT+ K S + L
Sbjct: 243 ----------------------------RSAITKGKEKVEGSTPSQGTSALKKESSFQGL 274
Query: 390 PSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNKRAI 211
G+MGK+LV++SGAVK+KLGD LYDVSPGSDC F QD++AI+ + K CC +G++ KRA+
Sbjct: 275 SEGYMGKMLVYRSGAVKIKLGDTLYDVSPGSDCTFAQDLMAIDIASKQCCTIGKLRKRAV 334
Query: 210 VTPDIDYLLEPVIYLT 163
VTPD+D LL VI L+
Sbjct: 335 VTPDVDSLLNSVINLS 350
>gb|KDP22444.1| hypothetical protein JCGZ_26275 [Jatropha curcas]
Length = 331
Score = 294 bits (752), Expect = 2e-76
Identities = 169/376 (44%), Positives = 217/376 (57%), Gaps = 2/376 (0%)
Frame = -2
Query: 1284 MDSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHL 1105
MD + TPRK KF PK PP +RK P K+EV + + L+RK NE+L
Sbjct: 1 MDQEQPSPTPRKAKFTPKAPP-QRKPIPTVTKSEVNDSNNDEDEAAQA-QKLMRKFNENL 58
Query: 1104 TRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSL 925
R+ P+ EKKSSVQVAF G A STS+R YG+ + S+ ++DS D R + S
Sbjct: 59 RRKVPKVEKKSSVQVAFGPGAAPSTSIRKYGVPGCENAGSSSRLDIKDSDNDDRRIVVSS 118
Query: 924 PSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDREE 745
ST + D + +A G KK+Y+EPWDYNH+YYPTTLP+RRPYSGDPE+L+ EE
Sbjct: 119 LSTAEEDGASKYHSEAIGVLPLKIKKDYREPWDYNHTYYPTTLPLRRPYSGDPELLNEEE 178
Query: 744 FGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNHK 565
FG A EY+E++I ASDLGLLEE D ++ F Q P+ LP VK
Sbjct: 179 FGEAARKLEYNENTIKPASDLGLLEESDKERLFFFQLPSKLPLVK--------------- 223
Query: 564 QRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSSVGTN--KNVCSLEEL 391
S TKGKE V S S GT+ K S + L
Sbjct: 224 ----------------------------RSAITKGKEKVEGSTPSQGTSALKKESSFQGL 255
Query: 390 PSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNKRAI 211
G+MGK+LV++SGAVK+KLGD LYDVSPGSDC F QD++AI+ + K CC +G++ KRA+
Sbjct: 256 SEGYMGKMLVYRSGAVKIKLGDTLYDVSPGSDCTFAQDLMAIDIASKQCCTIGKLRKRAV 315
Query: 210 VTPDIDYLLEPVIYLT 163
VTPD+D LL VI L+
Sbjct: 316 VTPDVDSLLNSVINLS 331
>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
gi|223550094|gb|EEF51581.1| DNA binding protein, putative
[Ricinus communis]
Length = 328
Score = 290 bits (742), Expect = 2e-75
Identities = 172/377 (45%), Positives = 221/377 (58%), Gaps = 3/377 (0%)
Frame = -2
Query: 1284 MDSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHL 1105
MD + + RKVKF PK P RR + PKTEV + + L+RK NE+
Sbjct: 1 MDDEQPSPSQRKVKFTPKAPSQRRPRRTV-PKTEVNGVDNNEDEAVQA-QKLMRKFNENF 58
Query: 1104 TRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSL 925
R+ P+ EKKS+VQVAF G SSTS+RT+G++K G+ +G++DS D + S
Sbjct: 59 RRQGPRVEKKSTVQVAFGPGATSSTSIRTFGVSK---GENPVSSGIKDSTDDDGKIVISS 115
Query: 924 PSTIKSDWMVE-SSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDRE 748
ST K D ++ +SED K KK +Y+EPWDY+ +YYPTTLP+RRPYSGDP +LD
Sbjct: 116 LSTDKEDEIINCASEDIDALPLKIKK-DYREPWDYDRTYYPTTLPLRRPYSGDPVLLDEA 174
Query: 747 EFGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNH 568
EFG A EYDES+++ ASDL LLEE D KM+F Q PA LP VK
Sbjct: 175 EFGEAARKLEYDESTMNPASDLELLEECDTEKMIFFQLPAKLPLVK-------------- 220
Query: 567 KQRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSSVGTN--KNVCSLEE 394
S KGKE S+ S G N K SL+
Sbjct: 221 -----------------------------RSASAKGKEKAEGSIPSQGKNAAKKESSLDG 251
Query: 393 LPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNKRA 214
L +G+MGK+LV++SGAVKLKLGD LYDVS GSDCMF QD++AINT+ K CC +GE+ KRA
Sbjct: 252 LSAGYMGKMLVYRSGAVKLKLGDTLYDVSQGSDCMFAQDVMAINTAAKHCCTIGELEKRA 311
Query: 213 IVTPDIDYLLEPVIYLT 163
+VTPD+D LL+ V+ L+
Sbjct: 312 VVTPDVDSLLDSVVNLS 328
>ref|XP_010035038.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like
[Eucalyptus grandis] gi|629079862|gb|KCW46307.1|
hypothetical protein EUGRSUZ_K00171 [Eucalyptus grandis]
Length = 331
Score = 284 bits (726), Expect = 2e-73
Identities = 162/359 (45%), Positives = 208/359 (57%), Gaps = 2/359 (0%)
Frame = -2
Query: 1254 RKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMN-ESLLRKVNEHLTRRCPQAEK 1078
RKVKF PK P PR+K + PKTE E + LLR+ NE+ ++ +
Sbjct: 7 RKVKFTPKAPAPRKKPPTVSPKTEANGGDGGEEAAVEAEAQMLLRRFNENFGQQGARVGN 66
Query: 1077 KSSVQVAFSHGVASSTS-LRTYGLAKEASGDRSNGTGVRDSAADTRADIHSLPSTIKSDW 901
KSSVQVAF G SS S +RT+G+ KE D+ G +R AA + S P ++D
Sbjct: 67 KSSVQVAFGPGAPSSASTIRTFGVPKEERSDQGCGPRLRSYAA-AKGQTISPPIVAETDA 125
Query: 900 MVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDREEFGGAKAAS 721
+ EDAT + KKEYKEPWD++HSYYPTTLP+R PYSGDPE+L+ +EFG A
Sbjct: 126 TDATMEDATAEVPRKSKKEYKEPWDFHHSYYPTTLPLRMPYSGDPEILNEKEFGEATRNF 185
Query: 720 EYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNHKQRAGSSRP 541
EYDE I++ASDLGLLE+ KMLF Q P NLPSV+
Sbjct: 186 EYDEGIINAASDLGLLEDSGRGKMLFFQLPPNLPSVR----------------------- 222
Query: 540 GGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSSVGTNKNVCSLEELPSGFMGKILV 361
T KGKE + +S+ S+ ++ C LE+L G+MGK++V
Sbjct: 223 ----RSTSVKGKE---------------KAESSASSAADASERDCKLEDLSGGYMGKLVV 263
Query: 360 FKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNKRAIVTPDIDYLL 184
+KSGAVKLKLG+ LYDVSPGSDC+F QD+ +NT+DK C+LGEV KR I+TPD D LL
Sbjct: 264 YKSGAVKLKLGETLYDVSPGSDCIFAQDVAVVNTADKHFCSLGEVGKRGIITPDFDSLL 322
>ref|XP_007038340.1| DNA binding protein, putative isoform 2 [Theobroma cacao]
gi|508775585|gb|EOY22841.1| DNA binding protein, putative
isoform 2 [Theobroma cacao]
Length = 328
Score = 282 bits (722), Expect = 5e-73
Identities = 170/375 (45%), Positives = 210/375 (56%), Gaps = 2/375 (0%)
Frame = -2
Query: 1284 MDSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHL 1105
MD D S RKV+FAPK P R+ K+EV + LL + NE+
Sbjct: 1 MDQDGPSSGRRKVRFAPKAPQSSRRLKTTVSKSEV----NDEDGEAAQAQYLLGRFNENQ 56
Query: 1104 TRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSL 925
TR+ P+ EKKSS Q++F G SS LR YG + + +S + R + I S
Sbjct: 57 TRQRPKVEKKSSAQISFGPGAPSSNLLRAYGSQRGGTSGKSTDSRQRSPDDNDGQIIGSF 116
Query: 924 PSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDREE 745
PS K D S DA +S K+EY+EPWDY+H+YYP TLP+RRPYSGDPE+LD+ E
Sbjct: 117 PSASKEDRTDICSSDAIEASAPKIKREYREPWDYHHTYYPITLPLRRPYSGDPELLDQAE 176
Query: 744 FGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNHK 565
F A A EYDE +I+ ASDLGLLEEG+ KM F Q PANLP +K
Sbjct: 177 FVEA-ARKEYDEKTINPASDLGLLEEGEKGKMFFFQLPANLPVIK--------------- 220
Query: 564 QRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSS--VGTNKNVCSLEEL 391
R S TKGKE + SS G K C LEEL
Sbjct: 221 -RLAS---------------------------TKGKEKAENLGSSERFGALKKGCQLEEL 252
Query: 390 PSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNKRAI 211
P GFMGK+LV+KSGAVKLKLG+ LYDVSPGSDC+F QD+ A+NT++K CC +GE+ KR +
Sbjct: 253 PGGFMGKMLVYKSGAVKLKLGETLYDVSPGSDCIFAQDVAAVNTTEKHCCVIGELGKRVV 312
Query: 210 VTPDIDYLLEPVIYL 166
VTPDI +L VI L
Sbjct: 313 VTPDISSVLNSVIDL 327
>ref|XP_012090467.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X2
[Jatropha curcas]
Length = 341
Score = 273 bits (697), Expect = 4e-70
Identities = 161/376 (42%), Positives = 210/376 (55%), Gaps = 2/376 (0%)
Frame = -2
Query: 1284 MDSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHL 1105
MD + TPRK KF PK PP +RK P K+EV + + L+RK NE+L
Sbjct: 20 MDQEQPSPTPRKAKFTPKAPP-QRKPIPTVTKSEVNDSNNDEDEAAQA-QKLMRKFNENL 77
Query: 1104 TRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSL 925
R+ P+ EKK + A STS+R YG+ + S+ ++DS D R + S
Sbjct: 78 RRKVPKVEKKCA---------APSTSIRKYGVPGCENAGSSSRLDIKDSDNDDRRIVVSS 128
Query: 924 PSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDREE 745
ST + D + +A G KK+Y+EPWDYNH+YYPTTLP+RRPYSGDPE+L+ EE
Sbjct: 129 LSTAEEDGASKYHSEAIGVLPLKIKKDYREPWDYNHTYYPTTLPLRRPYSGDPELLNEEE 188
Query: 744 FGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNHK 565
FG A EY+E++I ASDLGLLEE D ++ F Q P+ LP VK
Sbjct: 189 FGEAARKLEYNENTIKPASDLGLLEESDKERLFFFQLPSKLPLVK--------------- 233
Query: 564 QRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSSVGTN--KNVCSLEEL 391
S TKGKE V S S GT+ K S + L
Sbjct: 234 ----------------------------RSAITKGKEKVEGSTPSQGTSALKKESSFQGL 265
Query: 390 PSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNKRAI 211
G+MGK+LV++SGAVK+KLGD LYDVSPGSDC F QD++AI+ + K CC +G++ KRA+
Sbjct: 266 SEGYMGKMLVYRSGAVKIKLGDTLYDVSPGSDCTFAQDLMAIDIASKQCCTIGKLRKRAV 325
Query: 210 VTPDIDYLLEPVIYLT 163
VTPD+D LL VI L+
Sbjct: 326 VTPDVDSLLNSVINLS 341
>ref|XP_012852318.1| PREDICTED: uncharacterized protein LOC105971930 [Erythranthe
guttatus] gi|604305879|gb|EYU24936.1| hypothetical
protein MIMGU_mgv1a009918mg [Erythranthe guttata]
Length = 327
Score = 272 bits (695), Expect = 6e-70
Identities = 175/372 (47%), Positives = 216/372 (58%), Gaps = 5/372 (1%)
Frame = -2
Query: 1284 MDSDLSPSTPRKVKFAPKGP---PPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVN 1114
MD D + PRKV+FAPK P P+ S ++P EV E E L RKV
Sbjct: 1 MDPDPPKAAPRKVRFAPKEPRRRTPKPSSFKIEPAPEV-----DDTDDLEAQEFLTRKVK 55
Query: 1113 EHLTRRC-PQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRAD 937
EHL RR P++E K VQVAFS+ V SS S+RT+G KE+S G DS T
Sbjct: 56 EHLARRGRPKSENKGRVQVAFSNDVGSS-SIRTFGRQKESS---DVGHDAVDSKELTPNG 111
Query: 936 IHSLPSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVL 757
+ +L +++ + + K KK+EYKEPWDY +SYYPTTLP+RRPYSG+PE+L
Sbjct: 112 VQNLVTSMSITGLTNGV-----TVTKKKKREYKEPWDYENSYYPTTLPLRRPYSGNPELL 166
Query: 756 DREEFGGAKAASEYDESSIHSASDLGLL-EEGDGVKMLFLQFPANLPSVKWESGPDSTGT 580
D EF + A EYDE S+ SAS LGLL E+ + KMLF QFP+NLP+ K
Sbjct: 167 DNSEF---EDAVEYDEDSLSSASGLGLLDEDANTPKMLFFQFPSNLPTGK---------- 213
Query: 579 SMNHKQRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSSVGTNKNVCSL 400
RA S KGKEI G+ + +S+ K L
Sbjct: 214 ------RAAS------------KGKEIAGTNSRILA------------TSINPPKEGSRL 243
Query: 399 EELPSGFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNK 220
EELP G+MGK+LV+KSGAVKLKLG +LYDVSPGSDCMF Q +VA+NT+D CC +GEVNK
Sbjct: 244 EELPDGYMGKMLVYKSGAVKLKLGGVLYDVSPGSDCMFSQSVVAVNTTDGSCCEVGEVNK 303
Query: 219 RAIVTPDIDYLL 184
RAIVTPDI LL
Sbjct: 304 RAIVTPDIGSLL 315
>gb|KHG22798.1| DNA-directed RNA polymerase III subunit RPC4 [Gossypium arboreum]
Length = 302
Score = 268 bits (686), Expect = 7e-69
Identities = 163/366 (44%), Positives = 203/366 (55%)
Frame = -2
Query: 1284 MDSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHL 1105
MD D S RKV+FAPK P RK K+E + + LL + NE+L
Sbjct: 1 MDVDGPSSGRRKVRFAPKAPQSSRKPKLAVAKSETSDEDEEAAQA----QYLLGRFNENL 56
Query: 1104 TRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSL 925
TR+ P+ EKKSSVQ+AF G SSTSLR+YG ++ G + DS+
Sbjct: 57 TRQKPKVEKKSSVQIAFGPGAPSSTSLRSYG-------NKRAGRILDDSS---------- 99
Query: 924 PSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDREE 745
ST K D S DA + K EY+EPWDYN +YYPTTLP+RRPYSGDPE+LD E
Sbjct: 100 -STSKEDCTDICSSDAIEAPAPRVKSEYREPWDYNRTYYPTTLPLRRPYSGDPELLDEAE 158
Query: 744 FGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNHK 565
F A EYDE++I+ ASDLGLL+EGD KMLF QFP NLP +K
Sbjct: 159 F-VETAKKEYDEATINPASDLGLLQEGDKQKMLFFQFPGNLPRIK--------------- 202
Query: 564 QRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSSVGTNKNVCSLEELPS 385
P KGKE K + V+S G K C LEELP
Sbjct: 203 ------------QPVSKKGKE------------KAEHSVSS--DRFGALKKGCRLEELPE 236
Query: 384 GFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNKRAIVT 205
G++GK+LV+KSGAVKLK+G+ L+DVSPG C+F QD+ A NT+ K CC +GEV +R +VT
Sbjct: 237 GYVGKMLVYKSGAVKLKIGETLFDVSPGEACVFAQDVAAFNTASKQCCVIGEVGQRVVVT 296
Query: 204 PDIDYL 187
PD +L
Sbjct: 297 PDFSFL 302
>ref|XP_012466685.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X1
[Gossypium raimondii] gi|763740373|gb|KJB07872.1|
hypothetical protein B456_001G049700 [Gossypium
raimondii]
Length = 302
Score = 268 bits (685), Expect = 9e-69
Identities = 163/366 (44%), Positives = 202/366 (55%)
Frame = -2
Query: 1284 MDSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHL 1105
MD D S RKV+FAPK P RK K+E + + LL + NE+L
Sbjct: 1 MDVDGPSSGRRKVRFAPKAPQSSRKPKLAVAKSETSDEDEEAAQA----QYLLGRFNENL 56
Query: 1104 TRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSL 925
TR+ P+ EKKSSVQ+AF G SSTSLR+YG ++ G + DS+
Sbjct: 57 TRQKPKVEKKSSVQIAFGPGAPSSTSLRSYG-------NKRAGRILDDSS---------- 99
Query: 924 PSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDREE 745
ST K D S DA + K EY+EPWDYN +YYPTTLP+RRPYSGDPE+LD E
Sbjct: 100 -STSKEDCTDICSSDAIEAPAPRVKSEYREPWDYNRTYYPTTLPLRRPYSGDPELLDEAE 158
Query: 744 FGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNHK 565
F A EYDE++I+ ASDLGLLEEGD KMLF QFP NLP +K
Sbjct: 159 F-VETAKKEYDETTINPASDLGLLEEGDKQKMLFFQFPGNLPRIK--------------- 202
Query: 564 QRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSSVGTNKNVCSLEELPS 385
P KGKE K + V+S G K C LEELP
Sbjct: 203 ------------QPVSKKGKE------------KAEHSVSS--DRFGALKKGCRLEELPE 236
Query: 384 GFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNKRAIVT 205
G++GK+LV+KSGAVKLK+G+ L+D S G DC+F QD+ A NT+ K CC +GEV +R +VT
Sbjct: 237 GYVGKMLVYKSGAVKLKIGETLFDASTGEDCVFAQDVAAFNTASKQCCVIGEVGQRVVVT 296
Query: 204 PDIDYL 187
PD +L
Sbjct: 297 PDFSFL 302
>ref|XP_012466695.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X2
[Gossypium raimondii] gi|763740374|gb|KJB07873.1|
hypothetical protein B456_001G049700 [Gossypium
raimondii]
Length = 301
Score = 261 bits (668), Expect = 9e-67
Identities = 162/366 (44%), Positives = 201/366 (54%)
Frame = -2
Query: 1284 MDSDLSPSTPRKVKFAPKGPPPRRKSTPLQPKTEVAXXXXXXXXXDEMNESLLRKVNEHL 1105
MD D S RKV+FAPK P RK K+E + + LL + NE+L
Sbjct: 1 MDVDGPSSGRRKVRFAPKAPQSSRKPKLAVAKSETSDEDEEAAQA----QYLLGRFNENL 56
Query: 1104 TRRCPQAEKKSSVQVAFSHGVASSTSLRTYGLAKEASGDRSNGTGVRDSAADTRADIHSL 925
TR+ P+ EKKSSVQ+AF G SSTSLR+YG ++ G + DS+
Sbjct: 57 TRQKPKVEKKSSVQIAFGPGAPSSTSLRSYG-------NKRAGRILDDSS---------- 99
Query: 924 PSTIKSDWMVESSEDATGSSFKHKKKEYKEPWDYNHSYYPTTLPIRRPYSGDPEVLDREE 745
ST K D S DA + K EY+EPWDYN +YYPTTLP+RRPYSGDPE+LD E
Sbjct: 100 -STSKEDCTDICSSDAIEAPAPRVKSEYREPWDYNRTYYPTTLPLRRPYSGDPELLDEAE 158
Query: 744 FGGAKAASEYDESSIHSASDLGLLEEGDGVKMLFLQFPANLPSVKWESGPDSTGTSMNHK 565
F A EYDE++I+ ASDLGLL EGD KMLF QFP NLP +K
Sbjct: 159 F-VETAKKEYDETTINPASDLGLL-EGDKQKMLFFQFPGNLPRIK--------------- 201
Query: 564 QRAGSSRPGGSVAPTMAKGKEIPGSFPMVSVDTKGKEIVNSSMSSVGTNKNVCSLEELPS 385
P KGKE K + V+S G K C LEELP
Sbjct: 202 ------------QPVSKKGKE------------KAEHSVSS--DRFGALKKGCRLEELPE 235
Query: 384 GFMGKILVFKSGAVKLKLGDMLYDVSPGSDCMFPQDIVAINTSDKDCCNLGEVNKRAIVT 205
G++GK+LV+KSGAVKLK+G+ L+D S G DC+F QD+ A NT+ K CC +GEV +R +VT
Sbjct: 236 GYVGKMLVYKSGAVKLKIGETLFDASTGEDCVFAQDVAAFNTASKQCCVIGEVGQRVVVT 295
Query: 204 PDIDYL 187
PD +L
Sbjct: 296 PDFSFL 301