BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Gardenia21_contig00001869
         (3172 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP13767.1| unnamed protein product [Coffea canephora]           1213   0.0  
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]      1110   0.0  
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]               1108   0.0  
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]              1093   0.0  
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...  1093   0.0  
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]            1091   0.0  
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                1087   0.0  
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]                 1085   0.0  
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]                 1083   0.0  
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]            1078   0.0  
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]                 1069   0.0  
dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]                1063   0.0  
dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]             1057   0.0  
ref|XP_011093631.1| PREDICTED: DNA topoisomerase 1-like [Sesamum...  1058   0.0  
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]              1014   0.0  
ref|XP_012443903.1| PREDICTED: DNA topoisomerase 1-like [Gossypi...   971   0.0  
gb|KHG20024.1| DNA topoisomerase 1 -like protein [Gossypium arbo...   967   0.0  
dbj|BAP76305.1| topoisomerase I [Nothapodytes nimmoniana]             976   0.0  
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr...   966   0.0  
ref|XP_010323847.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...   944   0.0  

>emb|CDP13767.1| unnamed protein product [Coffea canephora]
          Length = 926

 Score = 1213 bits (3139), Expect = 0.0
 Identities = 623/750 (83%), Positives = 637/750 (84%)
 Frame = -1

Query: 2311 SSLVQMPGVREDEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSAS 2132
            SSLVQ PGV  +EDEDSDD+KPLSSR+ SKSNLVES SKS+NPGEKK L AKVQQNGSA 
Sbjct: 179  SSLVQKPGV--EEDEDSDDEKPLSSRYLSKSNLVESISKSRNPGEKKSLPAKVQQNGSAL 236

Query: 2131 RDGPVDKSSSLSIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDI 1952
            RDGPV KSSSLS KRPPGEVKSS ESAVKKPKLSGPTAAINKKQAT+K  PKVEDDDDDI
Sbjct: 237  RDGPVGKSSSLSNKRPPGEVKSSDESAVKKPKLSGPTAAINKKQATLKAEPKVEDDDDDI 296

Query: 1951 LISQTXXXXXXXXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1772
            LISQT                  DHVP+TQRM                            
Sbjct: 297  LISQTAKKMFASASKPKSNDDDDDHVPITQRMKKSTTSVSQSSSVKKVAKVVSSSLKKTN 356

Query: 1771 XXXXXXXXXXXXXXXXXXPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTP 1592
                              PPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTP
Sbjct: 357  KKSKKIIKKSKYSKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTP 416

Query: 1591 EQEEVATMFAVMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXX 1412
            EQEEVATMFAVMLDTDYM+KPQFK+NFFSDWK+ILGKNHTIQNLEDCDF PIYEWH    
Sbjct: 417  EQEEVATMFAVMLDTDYMSKPQFKENFFSDWKRILGKNHTIQNLEDCDFRPIYEWHQKEK 476

Query: 1411 XXXXXXXXXXXXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKL 1232
                                   K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKL
Sbjct: 477  EKKKQMTTEEKKSLKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKL 536

Query: 1231 KKRIRPRDITINIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAA 1052
            KKRIRPRDITINIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAA
Sbjct: 537  KKRIRPRDITINIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAA 596

Query: 1051 SSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFASKDPMKKQIAVATYLIDKLALRAGN 872
            SSTLKGQSDKEKYEKARLLKDYIHGIR AYTKDFASKDPMKKQIAVATYLIDKLALRAGN
Sbjct: 597  SSTLKGQSDKEKYEKARLLKDYIHGIRTAYTKDFASKDPMKKQIAVATYLIDKLALRAGN 656

Query: 871  EKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIG 692
            EKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVES VFKAIQQFR G
Sbjct: 657  EKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESGVFKAIQQFRSG 716

Query: 691  KEGSENLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVV 512
            KEGSE+LFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+S++T G DV EKVVV
Sbjct: 717  KEGSEDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRKTNGGDVLEKVVV 776

Query: 511  YQHANKEVAIICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNA 332
            YQ ANKEVAIICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNA
Sbjct: 777  YQQANKEVAIICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNA 836

Query: 331  DGKPKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCK 152
            DGKPKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCK
Sbjct: 837  DGKPKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCK 896

Query: 151  RQEVPIEKIFNKSLLAKFAWSMDVDPSFRF 62
            R EVPIEKIFNKSLLAKFAWSMDVDPSFRF
Sbjct: 897  RHEVPIEKIFNKSLLAKFAWSMDVDPSFRF 926



 Score =  134 bits (337), Expect = 5e-28
 Identities = 84/160 (52%), Positives = 88/160 (55%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+ACSTPSLLEDSDE+N PLVFKRT          S+ KKLSSQKRDGQSSRN SDV 
Sbjct: 1    MAVEACSTPSLLEDSDEENAPLVFKRTSSSSKQNLSNSETKKLSSQKRDGQSSRNSSDVC 60

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            PVNGQSSSAQ GRVVSSA T                                     TVK
Sbjct: 61   PVNGQSSSAQTGRVVSSAKTPPAKSPLSSPKAANISAKTSLITSPGANSKPSSSTSATVK 120

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDRL 2347
            QLENHK S                STPEDSDDDKPL  +L
Sbjct: 121  QLENHKNSPVVKLPKRSVSAAKLSSTPEDSDDDKPLMAKL 160


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score = 1110 bits (2872), Expect = 0.0
 Identities = 572/741 (77%), Positives = 604/741 (81%), Gaps = 2/741 (0%)
 Frame = -1

Query: 2278 DEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSL 2099
            +E EDS+D+KPLS RF SKS+L ESTSKS +  EKKPL AKVQQNGSASRDGP++KS+SL
Sbjct: 187  EESEDSEDEKPLSCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASL 246

Query: 2098 SIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXX 1919
            S KRPPGE KS  +S+VKKPKLS P  +I+ KQA VK  PK EDDDD+  I  +      
Sbjct: 247  SNKRPPGEAKSLNQSSVKKPKLSSPITSISNKQAAVKPEPKAEDDDDN--IPLSQRGKKS 304

Query: 1918 XXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1739
                        D+VP++QR+                                       
Sbjct: 305  QSATSKPKDDDDDNVPISQRIKKSPASVSKSSVPVKKASTVVSSSLKKVNKNSKKVIKKT 364

Query: 1738 XXXXXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    P GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK QP+TLTPEQEEVATMFA
Sbjct: 365  AYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFA 424

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
            VMLDTDYMNKP FK+NFFSDWKKILGKNH IQNLEDCDF PIYEWH              
Sbjct: 425  VMLDTDYMNKPCFKENFFSDWKKILGKNHMIQNLEDCDFGPIYEWHQQEKEKKKQMTTEE 484

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT
Sbjct: 485  KKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 544

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKDAPIPECPIPGERWKE+R+ NTVTWLA+WNDPIN KEFKYVFLAASSTLKGQSDK
Sbjct: 545  INIGKDAPIPECPIPGERWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDK 604

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFAS-KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            EKYEKARLLKDYIHGIRAAYTKDF + KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 605  EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 664

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE AVFKAIQQFR GKEGSE+LFD
Sbjct: 665  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFD 724

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            +LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+SKETKG +V E VVVYQHANKEVA
Sbjct: 725  RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAENVVVYQHANKEVA 784

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HSAQMSRLNEKI+ELK  LEELKTDLSRAKKGKPP K ADGK KRNLN
Sbjct: 785  IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPTKGADGKAKRNLN 844

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PEALERKI QTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKR EVPIEKI
Sbjct: 845  PEALERKITQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 904

Query: 124  FNKSLLAKFAWSMDVDPSFRF 62
            FNKSLLAKFAWSMDVDPSFRF
Sbjct: 905  FNKSLLAKFAWSMDVDPSFRF 925



 Score = 84.3 bits (207), Expect = 6e-13
 Identities = 58/159 (36%), Positives = 76/159 (47%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC+T +L+ED ++D  P++FKR+          S+ KKLS QK+DGQS+ + SDVR
Sbjct: 1    MAVEACTT-NLMEDMEDDGGPVIFKRSKPAPKQNQANSEKKKLSLQKQDGQSAVHTSDVR 59

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            P NG+SSSAQ GR+  SA T                                     T K
Sbjct: 60   PANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 119

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDR 2350
            Q  +HK+S                S  E SDD+KPLS R
Sbjct: 120  QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSAR 158


>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
          Length = 927

 Score = 1108 bits (2865), Expect = 0.0
 Identities = 568/741 (76%), Positives = 604/741 (81%), Gaps = 2/741 (0%)
 Frame = -1

Query: 2278 DEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSL 2099
            +E EDS+D+KPLS RF SKS+L ESTSKS +  EKKPL AKVQQNGS SRDGP++KS+SL
Sbjct: 187  EESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSRDGPMNKSASL 246

Query: 2098 SIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXX 1919
            S KRPPGEVKS  +S+VKKPKLS P  +I+ KQA VK  P+ + +DDD  I  +      
Sbjct: 247  SNKRPPGEVKSLNQSSVKKPKLSSPITSISNKQAAVKPEPEPKAEDDDDNIPLSQRGKKS 306

Query: 1918 XXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1739
                        D+VP+ QR+                                       
Sbjct: 307  QAATSKPKDEDDDNVPIAQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKNSKKVIKKT 366

Query: 1738 XXXXXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    P GSGEGQKWTTLVHNGVIFPPPY PHGVKMLYK QP+TLTPEQEEVATMFA
Sbjct: 367  AYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYNPHGVKMLYKRQPITLTPEQEEVATMFA 426

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
            VMLDTDYMNKP+FK+NFFSDWKK+LGKNHTIQNLEDCDF PIYEWH              
Sbjct: 427  VMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEE 486

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT
Sbjct: 487  KKALKEDKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 546

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKDAPIPECPIPGERWKE+R+DNTVTWLAFW DPIN KEFKYVFLAASSTLKGQSDK
Sbjct: 547  INIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASSTLKGQSDK 606

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFAS-KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            EKYEKARLLKDYIHGIRAAYTKDF + KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 607  EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 666

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE AVFKAIQQFR GKEGSE+LFD
Sbjct: 667  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFD 726

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            +LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+SKETKG +V EKVVVYQHANKEVA
Sbjct: 727  RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAEKVVVYQHANKEVA 786

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HSAQMSRLNEKI+ELK  +EELKTDLSR KKGKPP K ADGKPKRNLN
Sbjct: 787  IICNHQRTVSKSHSAQMSRLNEKIDELKTAMEELKTDLSRVKKGKPPSKGADGKPKRNLN 846

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PEALERK+AQ NAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKR EVPIEKI
Sbjct: 847  PEALERKMAQINAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 906

Query: 124  FNKSLLAKFAWSMDVDPSFRF 62
            FNKSLLAKFAWSMDVDPSFRF
Sbjct: 907  FNKSLLAKFAWSMDVDPSFRF 927



 Score = 82.8 bits (203), Expect = 2e-12
 Identities = 58/159 (36%), Positives = 74/159 (46%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC TP+L+ED ++D  P++FKR+          S+ KKLS QK  GQS+ + SDVR
Sbjct: 1    MAVEAC-TPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 59

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            P NG+SSSAQ GR+  SA T                                     T K
Sbjct: 60   PANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 119

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDR 2350
            Q  +HK+S                S  E SDD+KPLS R
Sbjct: 120  QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSAR 158


>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
          Length = 926

 Score = 1093 bits (2827), Expect = 0.0
 Identities = 558/741 (75%), Positives = 604/741 (81%), Gaps = 2/741 (0%)
 Frame = -1

Query: 2278 DEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSL 2099
            +E EDS+D+KPLS RFPSKS+L ESTSKS +  EKKPL AKVQQNGSAS +GP++KS+SL
Sbjct: 188  EESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASPEGPMNKSASL 247

Query: 2098 SIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXX 1919
            S KR PGEVKS  +S++KKPKLS P  +I+ KQA VK  PK EDDDD+I +SQ       
Sbjct: 248  SNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQT 307

Query: 1918 XXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1739
                         H P++QR+                                       
Sbjct: 308  AASKPKDEDDD--HAPISQRIKKSPVSVSKSSAPVKKASTVVSTSLKKVNKKSKKVIRKT 365

Query: 1738 XXXXXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    P GSGEGQKWTTLVHNGV+FPPPYKPHGVKMLYK QP+TLTPEQEEVATMFA
Sbjct: 366  AYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFA 425

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
            VMLDTDYMNKP+FK+NFFSDWKKILGKNHTIQNLEDCDF PIYEWH              
Sbjct: 426  VMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEE 485

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRIRPRDIT
Sbjct: 486  KKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDIT 545

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKDAPIPECPIPGERWKE+R+DNTVTWLA+WNDP+N KE KYVFLAASSTLKGQS K
Sbjct: 546  INIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNIKECKYVFLAASSTLKGQSVK 605

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFAS-KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            EKYEKAR+LKDYIHGIRAAYTK F + KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 606  EKYEKARVLKDYIHGIRAAYTKGFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 665

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVFKAIQQFR GKEGSE+LFD
Sbjct: 666  VGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFD 725

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            +LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+SKETKG  + EKV VYQHANKEVA
Sbjct: 726  RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKIAEKVAVYQHANKEVA 785

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HSAQMSRLNEKI+ELK  LEELKTDLSRAKKGKPP K+ADG+PKRNLN
Sbjct: 786  IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKDADGEPKRNLN 845

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PE+LERKIAQTNAKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKRQEVPIEK+
Sbjct: 846  PESLERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKM 905

Query: 124  FNKSLLAKFAWSMDVDPSFRF 62
            FNKSLLAKFAW+MDVDPSFRF
Sbjct: 906  FNKSLLAKFAWAMDVDPSFRF 926



 Score = 82.4 bits (202), Expect = 2e-12
 Identities = 55/159 (34%), Positives = 73/159 (45%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC+T +L+ED ++D  P++FKR+          ++ KKLS QK  GQS+ + SDVR
Sbjct: 1    MAVEACTTTNLMEDMEDDEGPVIFKRSNPTSKQNQANAEKKKLSLQKHVGQSAVHTSDVR 60

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            P NG+SSSAQ GR+  SA T                                     T K
Sbjct: 61   PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDR 2350
            Q  +HK+S                S  E SDD+KPL  R
Sbjct: 121  QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIAR 159


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score = 1093 bits (2826), Expect = 0.0
 Identities = 562/734 (76%), Positives = 600/734 (81%), Gaps = 2/734 (0%)
 Frame = -1

Query: 2278 DEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSL 2099
            +E EDS+D+KPLS RF SKS+L ESTSKS +  EKKPL AKVQ NGSASRD P++KS+SL
Sbjct: 188  EESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASL 247

Query: 2098 SIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXX 1919
            S KRPPGEVKS  +S++KKPKLS P  +I+ KQA VK  PK EDDDD+  I  +      
Sbjct: 248  SNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDN--IPLSQRGKKS 305

Query: 1918 XXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1739
                        D+VP++QR+                                       
Sbjct: 306  QTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKT 365

Query: 1738 XXXXXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    P GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK QP+TLTPEQEEVATMFA
Sbjct: 366  AYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFA 425

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
            VMLDTDYMNKP+FK+NFFSDWKK+LGKNHTIQNLEDCDF PIYEWH              
Sbjct: 426  VMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEE 485

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT
Sbjct: 486  KKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 545

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKDAPIPECPIPGERWKE+R+DNTVTWLA+WNDPIN KEFKYVFLAASSTLKGQSDK
Sbjct: 546  INIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDK 605

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFAS-KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            EKYEKARLLKDYIHGIRAAYTKDF + KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 606  EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 665

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE AVFKAIQQFR GKEGSE+LFD
Sbjct: 666  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFD 725

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            +LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+SK+T G +V EKVVVYQHANKEVA
Sbjct: 726  RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHANKEVA 785

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HSAQMSRLNEKI+ELK  LEELKTDLSRAKKGKP  K ADGKPKRNLN
Sbjct: 786  IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKPKRNLN 845

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKR EVPIEKI
Sbjct: 846  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 905

Query: 124  FNKSLLAKFAWSMD 83
            FNKSLLAKFAW+M+
Sbjct: 906  FNKSLLAKFAWAMN 919



 Score = 82.4 bits (202), Expect = 2e-12
 Identities = 55/159 (34%), Positives = 74/159 (46%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC+T +L+ED ++D  P++FKR+          S+ KKLS Q+  GQS+ + SDVR
Sbjct: 1    MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDVR 60

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            P NG++SSAQ GR+  SA T                                     T K
Sbjct: 61   PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSAGANSKPSASATSTAK 120

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDR 2350
            Q  +HK+S                S  E SDD+KPLS R
Sbjct: 121  QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSAR 159


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score = 1091 bits (2821), Expect = 0.0
 Identities = 561/734 (76%), Positives = 599/734 (81%), Gaps = 2/734 (0%)
 Frame = -1

Query: 2278 DEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSL 2099
            +E EDS+D+KPLS RF SKS+L ESTSKS +  EKKPL AKVQ NGSASRD P++KS+SL
Sbjct: 188  EESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASL 247

Query: 2098 SIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXX 1919
            S KRPPGEVKS  +S++KKPKLS P  +I+ KQA VK  PK EDDDD+  I  +      
Sbjct: 248  SNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDN--IPLSQRGKKS 305

Query: 1918 XXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1739
                        D+VP++QR+                                       
Sbjct: 306  QTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKT 365

Query: 1738 XXXXXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    P GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK QP+TLTPEQEEVATMFA
Sbjct: 366  AYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFA 425

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
            VMLDTDYMNKP+FK+NFFSDWKK+LGKNHTIQNLEDCDF PIYEWH              
Sbjct: 426  VMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEE 485

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT
Sbjct: 486  KKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 545

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKDAPIPECPIPGERWKE+R+DNTVTWLA+WNDPIN KEFKYVFLAASSTLKGQSDK
Sbjct: 546  INIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDK 605

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFAS-KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            EKYEKARLLKDYIHGIRAAYTKDF + KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 606  EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 665

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV+VE AVFKAI QFR GKEGSE+LFD
Sbjct: 666  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIHQFRSGKEGSEDLFD 725

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            +LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+SK+T G +V EKVVVYQHANKEVA
Sbjct: 726  RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHANKEVA 785

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HSAQMSRLNEKI+ELK  LEELKTDLSRAKKGKP  K ADGKPKRNLN
Sbjct: 786  IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKPKRNLN 845

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKR EVPIEKI
Sbjct: 846  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 905

Query: 124  FNKSLLAKFAWSMD 83
            FNKSLLAKFAW+M+
Sbjct: 906  FNKSLLAKFAWAMN 919



 Score = 83.6 bits (205), Expect = 1e-12
 Identities = 56/159 (35%), Positives = 74/159 (46%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC+T +L+ED ++D  P++FKR+          S+ KKLS QK  GQS+ + SDVR
Sbjct: 1    MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            P NG++SSAQ GR+  SA T                                     T K
Sbjct: 61   PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 120

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDR 2350
            Q  +HK+S                S  E SDD+KPLS R
Sbjct: 121  QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSAR 159


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score = 1087 bits (2811), Expect = 0.0
 Identities = 554/740 (74%), Positives = 593/740 (80%), Gaps = 2/740 (0%)
 Frame = -1

Query: 2275 EDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSLS 2096
            E+EDSDD+KPLSSRFP KS + ESTSK+ +  + KPL  K+Q NGSA RDG  +K S++S
Sbjct: 196  ENEDSDDEKPLSSRFPLKSGVGESTSKAYDSDDDKPLAKKLQHNGSAMRDGQPNKYSNMS 255

Query: 2095 IKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXXX 1916
             KRPPG++KSS + +VKKPKLS  TA  NKKQA+VK  PK EDDDDD             
Sbjct: 256  NKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVKPEPKAEDDDDD------------- 302

Query: 1915 XXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1736
                        H+P++QR+                                        
Sbjct: 303  ------------HLPISQRIKKSPTSESKSSSIKKTTKVVSSSVKKVNKKSKKVMKNSKY 350

Query: 1735 XXXXXXPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFAVM 1556
                  PP SGEG+KW  L HNGVIFPPPYKPHG+KMLYKG+PV LTPEQEEVATMFAVM
Sbjct: 351  SKSSKVPPSSGEGKKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVM 410

Query: 1555 LDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXXXX 1376
            LDTDYMNKP+FK+NFF DWKKILGKNH IQNLE+CDF+PIYEWH                
Sbjct: 411  LDTDYMNKPRFKENFFGDWKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKK 470

Query: 1375 XXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITIN 1196
                       K+MWA VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITIN
Sbjct: 471  ALKEEKLKQEEKYMWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITIN 530

Query: 1195 IGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEK 1016
            IGKDAPIPECP+PGERWKE+RHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKG SDKEK
Sbjct: 531  IGKDAPIPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEK 590

Query: 1015 YEKARLLKDYIHGIRAAYTKDFASKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGC 836
            YEKARLLKDYI GIRAAYTKDFASKDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGC
Sbjct: 591  YEKARLLKDYIQGIRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGC 650

Query: 835  CTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFDKLD 656
            CTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVE+AVFKAIQQFR GKEGS +LFD LD
Sbjct: 651  CTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLD 710

Query: 655  TSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVAIIC 476
            TSKLNAHLKELMPGLTAKVFRTYNASITLDDM+S+ETKG DV EKVVVYQHANKEVAIIC
Sbjct: 711  TSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIIC 770

Query: 475  NHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPL--KNADGKPKRNLNP 302
            NHQRTVSK+HSAQM RLNEKIEELK V+EELK+DLSR KKGKPPL  KNADGKPKRNLNP
Sbjct: 771  NHQRTVSKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNP 830

Query: 301  EALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKIF 122
            E+LE+KIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKR EVPIEKIF
Sbjct: 831  ESLEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 890

Query: 121  NKSLLAKFAWSMDVDPSFRF 62
            NKSLLAKF W+MDVDPSFRF
Sbjct: 891  NKSLLAKFTWAMDVDPSFRF 910



 Score = 79.3 bits (194), Expect = 2e-11
 Identities = 41/75 (54%), Positives = 51/75 (68%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC TP+L +D DED+ P+VFKR           S+ +K+SSQKRDGQS R   D R
Sbjct: 1    MAVEACPTPNLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSR 60

Query: 2646 PVNGQSSSAQMGRVV 2602
            P NG+SSS Q GR+V
Sbjct: 61   PANGESSSGQKGRMV 75


>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
          Length = 926

 Score = 1085 bits (2806), Expect = 0.0
 Identities = 558/741 (75%), Positives = 599/741 (80%), Gaps = 2/741 (0%)
 Frame = -1

Query: 2278 DEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSL 2099
            +E EDS+D+KPLS RFPSKS+L ESTSKS +  EKKPL AKVQQNGSASRDGP++KS+SL
Sbjct: 188  EESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASL 247

Query: 2098 SIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXX 1919
            S KR PGEVKS  +S++KKPKLS P  +I+ KQA VK  PK ED  DD  I  +      
Sbjct: 248  SNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAED--DDDNIPLSQRGKKS 305

Query: 1918 XXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1739
                        D+ P++QR+                                       
Sbjct: 306  QTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKT 365

Query: 1738 XXXXXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    P GSGEGQKWTTLVHNGV+FPPPYKPHGVKMLYK QP+TLTPEQEEVATMFA
Sbjct: 366  AYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFA 425

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
             MLDTDYMNKP+FK+NFFSDWKKILGKNHTIQNLEDCDF PIYEWH              
Sbjct: 426  AMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEREKKKQMTTEE 485

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI PRDIT
Sbjct: 486  KKALKDERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDIT 545

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKDAPIPECPIPGERWKE+R+DNTVTWLA+WNDP+N KE KYVFLA SSTLKGQSDK
Sbjct: 546  INIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDK 605

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFAS-KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            EKYEKARLLKDYIHGIRAAYTKDF + KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 606  EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 665

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVFKAIQQFR GKEGSE+LFD
Sbjct: 666  VGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFD 725

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            +LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+SKETKG  V EKV VYQHANKEVA
Sbjct: 726  RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVA 785

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HSAQMSRLNEKI+ELK  LEELKTDLSRAKKGKPP K  DG+PKRNLN
Sbjct: 786  IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGEPKRNLN 845

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PEALERKIAQTNAKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKRQEVPIEK+
Sbjct: 846  PEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKM 905

Query: 124  FNKSLLAKFAWSMDVDPSFRF 62
            FNKSLLAKFAW+MDVDPSFRF
Sbjct: 906  FNKSLLAKFAWAMDVDPSFRF 926



 Score = 82.4 bits (202), Expect = 2e-12
 Identities = 56/159 (35%), Positives = 73/159 (45%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC+T +L+ED ++D  P++FKR+          S+ KKLS QK  GQS+ + SDVR
Sbjct: 1    MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            P NG+SSSAQ GR+  SA T                                     T K
Sbjct: 61   PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDR 2350
            Q  +HK+S                S  E SDD+KPL  R
Sbjct: 121  QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIAR 159


>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
          Length = 926

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 557/741 (75%), Positives = 599/741 (80%), Gaps = 2/741 (0%)
 Frame = -1

Query: 2278 DEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSL 2099
            +E EDS+D+KPLS RFPSKS+L ESTSKS +  EKKPL AKVQQNGSASRDGP++KS+SL
Sbjct: 188  EESEDSEDEKPLSRRFPSKSSLGESTSKSHDSDEKKPLAAKVQQNGSASRDGPMNKSASL 247

Query: 2098 SIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXX 1919
            S KR PGEVKS  +S++KKPKLS    +I+ KQA VK  PK ED  DD  I  +      
Sbjct: 248  SNKRAPGEVKSLNQSSLKKPKLSSTITSISNKQAAVKPEPKAED--DDDNIPLSQRGKKS 305

Query: 1918 XXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1739
                        D+ P++QR+                                       
Sbjct: 306  QTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKT 365

Query: 1738 XXXXXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    P GSGEGQKWTTLVHNGV+FPPPYKPHGVKMLYK QP+TLTPEQEEVATMFA
Sbjct: 366  AYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFA 425

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
             MLDTDYMNKP+FK+NFFSDWKKILGKNHTIQNLEDCDF PIYEWH              
Sbjct: 426  AMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEE 485

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRIRPRDIT
Sbjct: 486  KKALKEERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDIT 545

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKDAPIPECPIPGERWKE+R+DNTVTWLA+WNDP+N KE KYVFLAASSTLKGQSDK
Sbjct: 546  INIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAASSTLKGQSDK 605

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFAS-KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            EKYEKARLLKDYIHGIRAAYTKDF + KDPMKKQ+AVATYLIDKLALRAGNEKDDDEADT
Sbjct: 606  EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQVAVATYLIDKLALRAGNEKDDDEADT 665

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVFKAIQQFR GKEGSE+LFD
Sbjct: 666  VGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFD 725

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            +LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+SKETKG  V EKV VYQ ANKEVA
Sbjct: 726  RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQRANKEVA 785

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HSAQMSRLNEKI+ELK  LEELKTDLSRAKKGKPP K  DG+PKRNLN
Sbjct: 786  IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGEPKRNLN 845

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PEALERKIAQTNAKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKRQEVPIEK+
Sbjct: 846  PEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKM 905

Query: 124  FNKSLLAKFAWSMDVDPSFRF 62
            FNKSLLAKFAW+MDVDPSFRF
Sbjct: 906  FNKSLLAKFAWAMDVDPSFRF 926



 Score = 85.5 bits (210), Expect = 3e-13
 Identities = 57/159 (35%), Positives = 74/159 (46%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC+TP+L+ED ++D  P++FKR+          S+ KKLS QK  GQS+ + SDVR
Sbjct: 1    MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            P NG+SSSAQ GR+  SA T                                     T K
Sbjct: 61   PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDR 2350
            Q  +HK+S                S  E SDD+KPL  R
Sbjct: 121  QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIAR 159


>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
          Length = 926

 Score = 1078 bits (2787), Expect = 0.0
 Identities = 556/741 (75%), Positives = 595/741 (80%), Gaps = 2/741 (0%)
 Frame = -1

Query: 2278 DEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSL 2099
            +E EDS+D+KPLS RFPSKS+L ESTSKS +  EKKPL  KVQQNGSASRDGP++KS+SL
Sbjct: 188  EESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASRDGPMNKSASL 247

Query: 2098 SIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXX 1919
              KR PGEVKS  +S++KK KLS P  +I+ KQA VK  PK ED  DD  I  +      
Sbjct: 248  LNKRAPGEVKSLNQSSLKKAKLSSPITSISNKQAAVKPEPKAED--DDDNIPLSQRGKKS 305

Query: 1918 XXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1739
                        D+ P++QR+                                       
Sbjct: 306  QTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKT 365

Query: 1738 XXXXXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    P GSGEGQKWTTLVHNGV+F PPYKPHGVKMLYK QP+TLTPEQEEVATMFA
Sbjct: 366  AYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGVKMLYKXQPLTLTPEQEEVATMFA 425

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
            VMLDTDYM KP+FK+NFFSDWKK+LGKNHT+QNLEDCDF PIYEWH              
Sbjct: 426  VMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRKQMTTEE 485

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT
Sbjct: 486  KKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 545

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKDAPIPECPIPGERWKE+R+DNTVTWLAFWNDPIN KE KYVFLAASSTLKGQSDK
Sbjct: 546  INIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWNDPINQKECKYVFLAASSTLKGQSDK 605

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFAS-KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            EKYEKARLLKDYIHGIRAAYTKDF + KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 606  EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 665

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVFKAIQQFR GKEG  +LFD
Sbjct: 666  VGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGCADLFD 725

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            +LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+SKETKG  V EKV VYQHANKEVA
Sbjct: 726  RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVA 785

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HSAQMSRLNEKI+ELK  LEELKTDLSRAKKGKPP K ADG+PKRNLN
Sbjct: 786  IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPAKGADGEPKRNLN 845

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PE+LERKIAQTNAKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKR EVPIEKI
Sbjct: 846  PESLERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRHEVPIEKI 905

Query: 124  FNKSLLAKFAWSMDVDPSFRF 62
            FNKSLLAKFAWSMDVDPSFRF
Sbjct: 906  FNKSLLAKFAWSMDVDPSFRF 926



 Score = 85.5 bits (210), Expect = 3e-13
 Identities = 57/159 (35%), Positives = 74/159 (46%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC+TP+L+ED ++D  P++FKR+          S+ KKLS QK  GQS+ + SDVR
Sbjct: 1    MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            P NG+SSSAQ GR+  SA T                                     T K
Sbjct: 61   PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDR 2350
            Q  +HK+S                S  E SDD+KPL  R
Sbjct: 121  QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIAR 159


>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
          Length = 920

 Score = 1069 bits (2764), Expect(2) = 0.0
 Identities = 550/734 (74%), Positives = 593/734 (80%), Gaps = 2/734 (0%)
 Frame = -1

Query: 2278 DEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSL 2099
            +E EDS+D+KPLS RFPSKS+L ESTSKS +  EKKPL AKVQQNGSASRDGP++KS+SL
Sbjct: 188  EESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASL 247

Query: 2098 SIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXX 1919
            S KR PGEVKS  +S++KKPKLS P  +I+ KQA VK  PK ED  DD  I  +      
Sbjct: 248  SNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAED--DDDNIPLSQRGKKS 305

Query: 1918 XXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1739
                        D+ P++QR+                                       
Sbjct: 306  QTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKT 365

Query: 1738 XXXXXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    P GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK QP+TLTPEQEEVATMFA
Sbjct: 366  AYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFA 425

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
            VMLDTDYMNKP+FK+NFFSDWKK+LGKNHTIQNLEDCDF PIYEWH              
Sbjct: 426  VMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEREKKKQMTTEE 485

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI PRDIT
Sbjct: 486  KKALKDERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDIT 545

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKDAPIPECPIPGERWKE+R+DNTVTWLA+WNDP+N KE KYVFLA SSTLKGQSDK
Sbjct: 546  INIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDK 605

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFAS-KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            EKYEKARLLKDYIHGIRAAYTKDF + KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 606  EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 665

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTL+VENVEPVPPNILK DF+GKDSIRYQNEV+VE AVFKAIQQFR GKEGSE+LFD
Sbjct: 666  VGCCTLRVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFD 725

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            +LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+SKETKG  V EKV VYQHANKEVA
Sbjct: 726  RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVA 785

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HSAQMSRLNEKI+ELK  LEELKTDLSRAKKGKPP K  DG+PKRNLN
Sbjct: 786  IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGEPKRNLN 845

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PEALERKIAQTNAKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKRQEVPIEK+
Sbjct: 846  PEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKM 905

Query: 124  FNKSLLAKFAWSMD 83
            FNKSLLAKFAW+M+
Sbjct: 906  FNKSLLAKFAWAMN 919



 Score = 82.4 bits (202), Expect(2) = 0.0
 Identities = 56/159 (35%), Positives = 73/159 (45%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC+T +L+ED ++D  P++FKR+          S+ KKLS QK  GQS+ + SDVR
Sbjct: 1    MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            P NG+SSSAQ GR+  SA T                                     T K
Sbjct: 61   PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDR 2350
            Q  +HK+S                S  E SDD+KPL  R
Sbjct: 121  QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIAR 159


>dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]
          Length = 920

 Score = 1063 bits (2748), Expect(2) = 0.0
 Identities = 548/734 (74%), Positives = 589/734 (80%), Gaps = 2/734 (0%)
 Frame = -1

Query: 2278 DEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSL 2099
            +E EDS+D+KPLS RFPSKS+L ESTSKS +  EKKPL AKVQ NGSASRDGP++KS+SL
Sbjct: 188  EESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDGPMNKSASL 247

Query: 2098 SIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXX 1919
            S KR PGEVKS  +S++KKPKLS P  +I+ KQA VK  PK ED  DD  I  +      
Sbjct: 248  SNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAED--DDDNIPLSQRGKKS 305

Query: 1918 XXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1739
                        D+ P++QR+                                       
Sbjct: 306  QTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKT 365

Query: 1738 XXXXXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    P GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK QP+TLTPEQEEVATMFA
Sbjct: 366  AYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFA 425

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
            VMLDTDYMNKP+FK+NFFSDWKK+LGKNHTIQNLEDCDF PIYEWH              
Sbjct: 426  VMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEE 485

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+MW IVDGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRIRPRDIT
Sbjct: 486  KKALKEERLQQEEKYMWVIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDIT 545

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKDAPIPECPIPGERWKE+R+DNTVTWLA+WNDPIN KE KYVFL ASSTLKGQSDK
Sbjct: 546  INIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKERKYVFLGASSTLKGQSDK 605

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFAS-KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            EKYEKARLLKDYIHGIRAAYTKDF + KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 606  EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 665

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVFKAIQQFR GKEGS +LFD
Sbjct: 666  VGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSADLFD 725

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            +LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+SKETKG  V EKV VYQHANKEVA
Sbjct: 726  RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVA 785

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HSAQMSRLNEKI+ELK  LEELKTDLSRAKKGKPP K ADG+PKRNLN
Sbjct: 786  IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGADGEPKRNLN 845

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PEALERKIAQTNAKIEKME DK+TKEDLK VAL TSKI+YL PRITVAWCKR EVPIEK+
Sbjct: 846  PEALERKIAQTNAKIEKMEGDKKTKEDLKAVALSTSKISYLGPRITVAWCKRHEVPIEKM 905

Query: 124  FNKSLLAKFAWSMD 83
            FNKSLLAKFAW+M+
Sbjct: 906  FNKSLLAKFAWAMN 919



 Score = 85.5 bits (210), Expect(2) = 0.0
 Identities = 57/159 (35%), Positives = 74/159 (46%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC+TP+L+ED ++D  P++FKR+          S+ KKLS QK  GQS+ + SDVR
Sbjct: 1    MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            P NG+SSSAQ GR+  SA T                                     T K
Sbjct: 61   PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDR 2350
            Q  +HK+S                S  E SDD+KPL  R
Sbjct: 121  QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIAR 159


>dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
          Length = 920

 Score = 1057 bits (2733), Expect(2) = 0.0
 Identities = 546/734 (74%), Positives = 590/734 (80%), Gaps = 2/734 (0%)
 Frame = -1

Query: 2278 DEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSL 2099
            +E EDS+D+KPLS RFPSKS+L ESTSKS +  EKKPL AKVQQNGSASRDGP++KS+SL
Sbjct: 188  EESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASL 247

Query: 2098 SIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXX 1919
            S KR PGEVKS  +S++KKPKLS P  +I+ KQA VK  PK ED  DD  I  +      
Sbjct: 248  SNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAED--DDDNIPLSQRGKKS 305

Query: 1918 XXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1739
                        D+ P++QR+                                       
Sbjct: 306  QTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKT 365

Query: 1738 XXXXXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    P GSGEGQKWTTLVHNGV+F PPYKPHGVKMLYK QP+TLTPEQEEVATMFA
Sbjct: 366  AYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGVKMLYKQQPLTLTPEQEEVATMFA 425

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
            VMLDTDYM KP+FK+NFFSDWKK+LGKNHT+QNLEDCDF PIYEWH              
Sbjct: 426  VMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRKQMTTEE 485

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+M AIVDGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI PRDIT
Sbjct: 486  KKALKEERLQQEEKYMRAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDIT 545

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKDAPIPECPIPGERWKE+R+DNTVTWLA+WNDP+N KE KYVFLA SSTLKGQSDK
Sbjct: 546  INIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDK 605

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFAS-KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            EKYEKARLLKDYIHGIRAAYTKDF + KDPMKKQIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 606  EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 665

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTLKVENVEPVPPNILK DF+GKDSIRYQNEV+VE AVFKAIQQFR GKEGSE+LFD
Sbjct: 666  VGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFD 725

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            +LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM+SKETKG  V EKV VYQHANKEVA
Sbjct: 726  RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVA 785

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HSAQMSRLNEKI+ELK  LEELKTDLSRAKKGKPP K  DG+PKRNLN
Sbjct: 786  IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGEPKRNLN 845

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PEALERKIAQTNAKIEKMERDK+TKEDLK VAL TSKI+YLDPRITVAWCKRQEVPIEK+
Sbjct: 846  PEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKM 905

Query: 124  FNKSLLAKFAWSMD 83
            FNKSLLAKFAW+M+
Sbjct: 906  FNKSLLAKFAWAMN 919



 Score = 82.4 bits (202), Expect(2) = 0.0
 Identities = 56/159 (35%), Positives = 73/159 (45%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV+AC+T +L+ED ++D  P++FKR+          S+ KKLS QK  GQS+ + SDVR
Sbjct: 1    MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 2646 PVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVK 2467
            P NG+SSSAQ GR+  SA T                                     T K
Sbjct: 61   PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120

Query: 2466 QLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDR 2350
            Q  +HK+S                S  E SDD+KPL  R
Sbjct: 121  QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIAR 159


>ref|XP_011093631.1| PREDICTED: DNA topoisomerase 1-like [Sesamum indicum]
          Length = 893

 Score = 1058 bits (2736), Expect(2) = 0.0
 Identities = 542/750 (72%), Positives = 592/750 (78%)
 Frame = -1

Query: 2311 SSLVQMPGVREDEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSAS 2132
            ++L  +   +  + EDSDD+ PLSS+F  KSN  EST++    GE+KPLLAK  QNGSAS
Sbjct: 173  NALTSVQKTKIPKPEDSDDEIPLSSKFQVKSNAGESTNRPSISGERKPLLAKYDQNGSAS 232

Query: 2131 RDGPVDKSSSLSIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDI 1952
             +    K S++  KRP   VKS+ ES +KKPKLS  +     K+ ++K   K EDD+D  
Sbjct: 233  AER---KPSTILKKRPADGVKSAGESYLKKPKLSDASTPNKTKETSIKDEMKDEDDED-- 287

Query: 1951 LISQTXXXXXXXXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1772
                                    HVP++QR+                            
Sbjct: 288  ------------------------HVPISQRIKQQTSSDKKSSSAKNMTKPISASAKKTS 323

Query: 1771 XXXXXXXXXXXXXXXXXXPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTP 1592
                              PP SGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKG+PV LTP
Sbjct: 324  KKPKKVMKNSKYSKSSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTP 383

Query: 1591 EQEEVATMFAVMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXX 1412
            EQEEVATM+AVMLDTDYMNKP+FK+NF +DW+KILGKNH IQ+LE CDFTPIYEWH    
Sbjct: 384  EQEEVATMYAVMLDTDYMNKPKFKENFMADWRKILGKNHVIQSLEHCDFTPIYEWHQKEK 443

Query: 1411 XXXXXXXXXXXXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKL 1232
                                   K+MWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKL
Sbjct: 444  EKKKQMTAEEKKALKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKL 503

Query: 1231 KKRIRPRDITINIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAA 1052
            KKRIRP DITINIGKDAPIPECPIPGE WKEIRHDNTVTWLA+WNDPINPKEFKYVFLAA
Sbjct: 504  KKRIRPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAA 563

Query: 1051 SSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFASKDPMKKQIAVATYLIDKLALRAGN 872
            SSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDF +KDP KKQIAVATYLIDKLALRAGN
Sbjct: 564  SSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNKDPTKKQIAVATYLIDKLALRAGN 623

Query: 871  EKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIG 692
            EKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVE+ VFKAIQQFR G
Sbjct: 624  EKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVETPVFKAIQQFRSG 683

Query: 691  KEGSENLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVV 512
            K+GS+++FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDD +S+ETKG DV EKVVV
Sbjct: 684  KKGSDDMFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDKLSRETKGGDVAEKVVV 743

Query: 511  YQHANKEVAIICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNA 332
            YQHANKEVAIICNHQRTVSK+HSAQM+RLNEKIEELKGVLEEL+TDL+RAKKGKPPLK+A
Sbjct: 744  YQHANKEVAIICNHQRTVSKSHSAQMTRLNEKIEELKGVLEELQTDLARAKKGKPPLKSA 803

Query: 331  DGKPKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCK 152
            DGKPKRNLNP+ALE+KIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCK
Sbjct: 804  DGKPKRNLNPDALEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCK 863

Query: 151  RQEVPIEKIFNKSLLAKFAWSMDVDPSFRF 62
            R EVPIEKIFNKSLLAKFAW+MDVDPSFRF
Sbjct: 864  RHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 893



 Score = 26.2 bits (56), Expect(2) = 0.0
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -2

Query: 2385 EDSDDDKPLSDRL 2347
            EDS+DDKPLS RL
Sbjct: 144  EDSEDDKPLSARL 156



 Score = 63.2 bits (152), Expect = 2e-06
 Identities = 33/80 (41%), Positives = 47/80 (58%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MA+++C+   L++D DED+ PLVFKR+          S+ K+  SQK D   +R   DVR
Sbjct: 1    MAIESCNDQKLMDDMDEDDEPLVFKRSSSSAKQSQGNSETKRPLSQKHDRPLNRPSPDVR 60

Query: 2646 PVNGQSSSAQMGRVVSSANT 2587
            P NGQS+  Q  + V S+ T
Sbjct: 61   PQNGQSTMIQKSKTVPSSRT 80


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score = 1014 bits (2622), Expect = 0.0
 Identities = 520/737 (70%), Positives = 569/737 (77%), Gaps = 1/737 (0%)
 Frame = -1

Query: 2269 EDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSLSIK 2090
            +DSDD+ PLSS+F  K+N   ST KS    + K L++  QQNGS +R     KSS    K
Sbjct: 186  DDSDDEIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQNGSINRGS---KSSIKVNK 242

Query: 2089 RPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXXXXX 1910
            RP GEVKSS++S+VKKPKLS  +  +N KQA+ K  PK +D DDD               
Sbjct: 243  RPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDDD--------------- 287

Query: 1909 XXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1730
                      HVP++QRM                                          
Sbjct: 288  ----------HVPISQRMKKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYS 337

Query: 1729 XXXXPP-GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFAVML 1553
                 P  SGEG+KW TLVHNGVIFPPPYKPHGVKMLYKG+PV LTPEQEEVATMFAVML
Sbjct: 338  KSSKVPPSSGEGKKWNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVML 397

Query: 1552 DTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXXXXX 1373
            DTDYM K +FK+NF  DW+KILGKNH IQNLEDCDFTPIYEWH                 
Sbjct: 398  DTDYMTKSKFKENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKV 457

Query: 1372 XXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINI 1193
                      K+MWAIV+GVKEKVGNFRVEPP LFRGRGEHPKMGKLKK IRP DITINI
Sbjct: 458  LKEERLKQEEKYMWAIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINI 517

Query: 1192 GKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEKY 1013
            GKDAPIPECPIPGE WKEIRHDNTVTWLAFWNDPI P+EFKYVFLAASS+LKGQSDKEKY
Sbjct: 518  GKDAPIPECPIPGESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKY 577

Query: 1012 EKARLLKDYIHGIRAAYTKDFASKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 833
            EKARLLKD+I GIRAAYTKDFASKD  K+QIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 578  EKARLLKDFIQGIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 637

Query: 832  TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFDKLDT 653
            TLKVENVEP PP+ILKFDFLGKDSIRYQNEVEVE  V+KAIQQFR GK G ++LFDKLDT
Sbjct: 638  TLKVENVEPKPPSILKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDT 697

Query: 652  SKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVAIICN 473
            SKLNAHLK LMPGLTAKVFRTYNASITLD+M+S+ETKG +V EK+VVYQHANKEVAIICN
Sbjct: 698  SKLNAHLKGLMPGLTAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEVAIICN 757

Query: 472  HQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLNPEAL 293
            HQRTVSK+H AQM+RLN KI+ELKG+L+ L+TDL+RAKKGKPPL++ADGKPKRNL PEAL
Sbjct: 758  HQRTVSKSHPAQMTRLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNLTPEAL 817

Query: 292  ERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKIFNKS 113
            ERKI QTNAKIEKMERDKETKE LKT+ALGTSKI+YLDPRITVAWCKR EVPIEK+FNKS
Sbjct: 818  ERKIGQTNAKIEKMERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVFNKS 877

Query: 112  LLAKFAWSMDVDPSFRF 62
            LLAKFAWSMDVDPSFRF
Sbjct: 878  LLAKFAWSMDVDPSFRF 894



 Score = 63.9 bits (154), Expect = 9e-07
 Identities = 37/73 (50%), Positives = 45/73 (61%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDVR 2647
            MAV AC    ++++ DED+ PLVFKR+          SD KK SSQ+ DGQS R  SDV 
Sbjct: 1    MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKK-SSQRYDGQSGRQVSDVP 59

Query: 2646 PVNGQSSSAQMGR 2608
              NGQSSSA  G+
Sbjct: 60   STNGQSSSASKGK 72


>ref|XP_012443903.1| PREDICTED: DNA topoisomerase 1-like [Gossypium raimondii]
            gi|823222380|ref|XP_012443904.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222382|ref|XP_012443905.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222384|ref|XP_012443906.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222386|ref|XP_012443907.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222388|ref|XP_012443908.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222390|ref|XP_012443909.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222392|ref|XP_012443910.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|763795950|gb|KJB62946.1| hypothetical protein
            B456_009G444700 [Gossypium raimondii]
            gi|763795951|gb|KJB62947.1| hypothetical protein
            B456_009G444700 [Gossypium raimondii]
            gi|763795953|gb|KJB62949.1| hypothetical protein
            B456_009G444700 [Gossypium raimondii]
          Length = 901

 Score =  971 bits (2509), Expect(2) = 0.0
 Identities = 502/737 (68%), Positives = 555/737 (75%), Gaps = 1/737 (0%)
 Frame = -1

Query: 2269 EDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSLSIK 2090
            ED DD  PLS+RF  KSN   S+SK     EKKPL +K+QQNGS  +D    K S LS K
Sbjct: 194  EDPDDDAPLSARFSMKSNTGTSSSKPYGSHEKKPLPSKIQQNGSIMKDKQ-QKCSVLSDK 252

Query: 2089 RPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXXXXX 1910
            RP  +  SS +S  KKPK+S     +  KQ TVK     +DD+DD               
Sbjct: 253  RPLDKGNSSDQSYAKKPKISDTPTTMKTKQVTVKAE---KDDEDD--------------- 294

Query: 1909 XXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1730
                      H+P++QR+                                          
Sbjct: 295  ----------HIPISQRIKKSVSSVSKTSSVKQKATKVVSSSFKKINKSKKDMKKSKYSK 344

Query: 1729 XXXXPPGSGEGQK-WTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFAVML 1553
                 P SG+GQK W+TLVHNGVIFPPPYKPHGVKMLY GQPV LTPEQEEVATMFAVM 
Sbjct: 345  STKLSPSSGDGQKKWSTLVHNGVIFPPPYKPHGVKMLYDGQPVDLTPEQEEVATMFAVMQ 404

Query: 1552 DTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXXXXX 1373
            +TDYM+KPQFKKNF+ DW K+LG+NH I++L+ CDFTPIYEWH                 
Sbjct: 405  ETDYMSKPQFKKNFWEDWSKLLGRNHVIKSLDKCDFTPIYEWHLQEKEKKKQMSSEEKKA 464

Query: 1372 XXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINI 1193
                      K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITINI
Sbjct: 465  LKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPCDITINI 524

Query: 1192 GKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEKY 1013
            GKDAPIPECPIPGERWK+I+HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKGQSDKEKY
Sbjct: 525  GKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKY 584

Query: 1012 EKARLLKDYIHGIRAAYTKDFASKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 833
            EKARLLKDYI  IRAAYTKDF +KD  K+QIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 585  EKARLLKDYIKNIRAAYTKDFTAKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 644

Query: 832  TLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFDKLDT 653
            TLKV NVE +PPN LKFDFLGKDSI+Y N VEVE  V+KAI QF+  K  S++LFD+LDT
Sbjct: 645  TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTRKSKSDDLFDELDT 704

Query: 652  SKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVAIICN 473
            SKLNAHLKELMPGLTAKVFRTYNASITLDDM+++ET+  DV EKVV+YQ ANKEVAIICN
Sbjct: 705  SKLNAHLKELMPGLTAKVFRTYNASITLDDMLNQETEDGDVAEKVVIYQRANKEVAIICN 764

Query: 472  HQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLNPEAL 293
            HQR++SK+HSAQMSRL EKI ELKGVL+ELKTDL RAKKGKPPLK+ADGK KRNL PEA+
Sbjct: 765  HQRSISKSHSAQMSRLTEKITELKGVLKELKTDLDRAKKGKPPLKDADGKQKRNLTPEAI 824

Query: 292  ERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKIFNKS 113
            E+KIAQTN KIEKMERD +TKEDLKTVALGTSKINYLDPRITVAWCKR EVPIEKIFNKS
Sbjct: 825  EKKIAQTNVKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS 884

Query: 112  LLAKFAWSMDVDPSFRF 62
            LLAKFAW+MDVDP FRF
Sbjct: 885  LLAKFAWAMDVDPDFRF 901



 Score = 45.4 bits (106), Expect(2) = 0.0
 Identities = 41/161 (25%), Positives = 59/161 (36%), Gaps = 1/161 (0%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXS-DIKKLSSQKRDGQSSRNGSDV 2650
            MAV+A S      D ++D+ P+VFKR+          + ++KK SSQ+ DGQS R  S V
Sbjct: 1    MAVEAPSKHVYDYDDEDDDGPVVFKRSNTSSSKQNQLNSEVKKASSQRSDGQSGRQASSV 60

Query: 2649 RPVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTV 2470
            +  NGQ+S A   + +  + +                                       
Sbjct: 61   QAPNGQNSVAWTNKSILPSKSPPTRSPILSPKSSNSSAKASPVRSPVVSSKASTSLSDQS 120

Query: 2469 KQLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDRL 2347
            KQ                       ++ ED DD KPLS RL
Sbjct: 121  KQALKQNKFTAVKEEKRLIKCTDETNSDEDDDDSKPLSARL 161


>gb|KHG20024.1| DNA topoisomerase 1 -like protein [Gossypium arboreum]
          Length = 903

 Score =  967 bits (2500), Expect(2) = 0.0
 Identities = 501/738 (67%), Positives = 557/738 (75%), Gaps = 2/738 (0%)
 Frame = -1

Query: 2269 EDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSLSIK 2090
            ED DD  PLS+RF +KSN   S+SK     EKKPL +K+QQNGS  +     KSS LS K
Sbjct: 195  EDPDDDAPLSARFSTKSNTGTSSSKPYGSHEKKPLASKIQQNGSIMKVKQ-QKSSMLSDK 253

Query: 2089 RPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXXXXX 1910
            RP  +  SS +S  KKPK+S     +  KQ TVK     +DD+DD               
Sbjct: 254  RPLDKGNSSDQSYAKKPKISDTPTMMKTKQVTVKAE---KDDEDD--------------- 295

Query: 1909 XXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1730
                      H+P++QR+                                          
Sbjct: 296  ----------HIPISQRIKKSVSSVSKASSVKQKATKVVSSSFKKINKKSKKDMKKSKYS 345

Query: 1729 XXXXP-PGSGEGQK-WTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFAVM 1556
                  P SG+GQK W+TLVHNGVIFPPPYKPHGVKMLY G+PV LTPEQEEVATMFAVM
Sbjct: 346  KSTKLSPSSGDGQKKWSTLVHNGVIFPPPYKPHGVKMLYDGRPVDLTPEQEEVATMFAVM 405

Query: 1555 LDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXXXX 1376
             +TDYM+KPQFKKNF+ DW K+LG+NH I++L+ CDFTPIYEWH                
Sbjct: 406  QETDYMSKPQFKKNFWEDWSKLLGRNHVIKSLDKCDFTPIYEWHLQEKEKKKQMSSEEKK 465

Query: 1375 XXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITIN 1196
                       K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITIN
Sbjct: 466  ALKEEKLMQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPCDITIN 525

Query: 1195 IGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDKEK 1016
            IGKDAPIPECPIPGERWK+I+HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKGQSDKEK
Sbjct: 526  IGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEK 585

Query: 1015 YEKARLLKDYIHGIRAAYTKDFASKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGC 836
            YEKARLLKDYI  IRAAYTKDF +KD  K+QIAVATYLIDKLALRAGNEKDDDEADTVGC
Sbjct: 586  YEKARLLKDYIKNIRAAYTKDFTAKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGC 645

Query: 835  CTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFDKLD 656
            CTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE  V+KAI QF+ GK  S++LFD+LD
Sbjct: 646  CTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDELD 705

Query: 655  TSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVAIIC 476
            TSKLNAHLKELMPGLTAKVFRT+NASITLDDM++KETK  DV EKVV+YQ ANKEVAIIC
Sbjct: 706  TSKLNAHLKELMPGLTAKVFRTFNASITLDDMLNKETKDGDVAEKVVIYQRANKEVAIIC 765

Query: 475  NHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLNPEA 296
            NHQR++SK+HSAQMSRL EKI ELKG+++ELKTDL RAKKGKPPLK+ADGK KRNL PEA
Sbjct: 766  NHQRSISKSHSAQMSRLTEKINELKGLVKELKTDLDRAKKGKPPLKDADGKQKRNLTPEA 825

Query: 295  LERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKIFNK 116
            +E+KIAQTN KIEKMERD +TKEDLKTVALGTSKINYLDPRITVAWCKR EVPIEKIFNK
Sbjct: 826  IEKKIAQTNVKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 885

Query: 115  SLLAKFAWSMDVDPSFRF 62
            SLLAKFAW+MDVDP FRF
Sbjct: 886  SLLAKFAWAMDVDPDFRF 903



 Score = 48.5 bits (114), Expect(2) = 0.0
 Identities = 44/162 (27%), Positives = 63/162 (38%), Gaps = 2/162 (1%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDEDNLPLVFKRTXXXXXXXXXXS-DIKKLSSQKRDGQSSRNGSDV 2650
            MAV+A S      D ++D+ P+VFKR+          + ++KK SSQ+ DGQS R  S V
Sbjct: 1    MAVEAPSKHVFDYDDEDDDGPVVFKRSNTSSSKQNQLNSEVKKASSQRSDGQSGRQASSV 60

Query: 2649 RPVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTV 2470
            R  NGQ+S AQ  + +  + +                                       
Sbjct: 61   RAPNGQNSVAQTNKSIPPSKSPPIRSPILSPKSSNSSSKASPVRSPVVSSKASTSFNDQS 120

Query: 2469 KQL-ENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDRL 2347
            KQ  + +K +                S  +D DD KPLS RL
Sbjct: 121  KQASKQNKFTAVKEEKSPIKRTDETNSDDDDDDDSKPLSARL 162


>dbj|BAP76305.1| topoisomerase I [Nothapodytes nimmoniana]
          Length = 939

 Score =  976 bits (2523), Expect = 0.0
 Identities = 511/746 (68%), Positives = 569/746 (76%), Gaps = 9/746 (1%)
 Frame = -1

Query: 2272 DEDSDDQKPLSSRFPSKSNLVESTSKSKNP----GEKKPLLA-KVQQNGSASRDG-PVDK 2111
            +EDSDD+KPL+S+   KSN  E    S+ P     ++KPL + +++QNG A+RD   +  
Sbjct: 219  EEDSDDEKPLASKLQVKSN--EGALVSRKPCDSNDKRKPLASPQLRQNGFATRDNYQLKV 276

Query: 2110 SSSLSIKRPPGEVKSS-IESAVKKPKLSGPTAA--INKKQATVKVAPKVEDDDDDILISQ 1940
            SSSL  KRP  +VKSS  +S+ KKPK+S   +    + K  +++   K +D D++     
Sbjct: 277  SSSLPSKRPLDQVKSSGDQSSTKKPKVSNSASKPITSNKHGSLQSGVKTKDADEE----- 331

Query: 1939 TXXXXXXXXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1760
                               DH+P++QR+                                
Sbjct: 332  ------------------EDHLPISQRVKKTGALDKSSSSTKQKMVKVSSSSKKINKNSK 373

Query: 1759 XXXXXXXXXXXXXXPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEE 1580
                          PPGSGEGQKWTTLVH GVIFPPPYKPHGVKMLYK Q V LTPEQEE
Sbjct: 374  KVVKKSKYSVSSKVPPGSGEGQKWTTLVHKGVIFPPPYKPHGVKMLYKRQTVDLTPEQEE 433

Query: 1579 VATMFAVMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXX 1400
            VATM+AVMLDTDYMNK  FK+NFF+DWKKILGKNH IQNLEDCDFTPIYEWH        
Sbjct: 434  VATMYAVMLDTDYMNKSIFKQNFFTDWKKILGKNHVIQNLEDCDFTPIYEWHQKEKEKKK 493

Query: 1399 XXXXXXXXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 1220
                               KFMWAIVDGVKEKVGNFRVEPP LFRGRGEHPK GKLKKRI
Sbjct: 494  QMTKDEKQALREETLKREEKFMWAIVDGVKEKVGNFRVEPPSLFRGRGEHPKTGKLKKRI 553

Query: 1219 RPRDITINIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTL 1040
            RP DITINIGKDAPIPECPIPGERWKEIRHDNTVTWLA+W DPI PKEFKYVFL ASS+L
Sbjct: 554  RPSDITINIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWADPIKPKEFKYVFLGASSSL 613

Query: 1039 KGQSDKEKYEKARLLKDYIHGIRAAYTKDFASKDPMKKQIAVATYLIDKLALRAGNEKDD 860
            KGQSDKEKYEKAR+LKDY+ GIRAAYTKDFAS+D  K+QIAVATYLIDKLALRAGNEKD+
Sbjct: 614  KGQSDKEKYEKARMLKDYVQGIRAAYTKDFASRDLTKQQIAVATYLIDKLALRAGNEKDE 673

Query: 859  DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGS 680
            DEADTVGCCTLKVENVE  PPNIL+FDF+GKDSIRYQN VEVE AVFKAIQQF+ GK+ +
Sbjct: 674  DEADTVGCCTLKVENVELKPPNILEFDFIGKDSIRYQNVVEVELAVFKAIQQFQTGKKST 733

Query: 679  ENLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHA 500
            ++LF+ LDTSKLNAHLKELMPGLTAKVFRTYNASITLD+M+S+ETK  DV EK+VVYQHA
Sbjct: 734  DDLFNMLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLSRETKDGDVAEKIVVYQHA 793

Query: 499  NKEVAIICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKP 320
            NKEVAIICNHQRTVSK+H AQM RLNEK+EELKG LEE+KTDL+RAKKGKPPL+ ADGKP
Sbjct: 794  NKEVAIICNHQRTVSKSHGAQMLRLNEKLEELKGALEEMKTDLARAKKGKPPLQTADGKP 853

Query: 319  KRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEV 140
            KRNLNPE LERKIAQTN KIEKMER KETKEDLKTVALGTSK+NYLDPRITVAWCKR EV
Sbjct: 854  KRNLNPEGLERKIAQTNLKIEKMERLKETKEDLKTVALGTSKLNYLDPRITVAWCKRHEV 913

Query: 139  PIEKIFNKSLLAKFAWSMDVDPSFRF 62
            PIEKIFNKSLLAKF W+MDVDPSFRF
Sbjct: 914  PIEKIFNKSLLAKFTWAMDVDPSFRF 939


>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|567920950|ref|XP_006452481.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555705|gb|ESR65719.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555707|gb|ESR65721.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 902

 Score =  966 bits (2497), Expect(2) = 0.0
 Identities = 503/741 (67%), Positives = 560/741 (75%), Gaps = 3/741 (0%)
 Frame = -1

Query: 2275 EDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSSSLS 2096
            + EDSDD+ PLSSRFP KSN   S +K  +  EKKPL +KVQQNGS SR+    KSSS+ 
Sbjct: 191  DPEDSDDEVPLSSRFP-KSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRETQ-QKSSSVP 248

Query: 2095 IKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXXXXX 1916
            +KRP  +  SS  S+ KKPK+S  +  +  KQ TVKV  K +DDD               
Sbjct: 249  VKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKVEKKADDDD--------------- 293

Query: 1915 XXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1736
                        H+P++QRM                                        
Sbjct: 294  ------------HIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQ 341

Query: 1735 XXXXXXP-PGSGEGQK-WTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMFA 1562
                    PGSG+GQK WTTLVHNGVIFPPPY PHGVKMLYKG+ V LTPEQEEVATMFA
Sbjct: 342  YSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFA 401

Query: 1561 VMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXXX 1382
            VMLDTDYM KP+F++NF++DW+K+LGKNH IQNLE CDF PIY+WH              
Sbjct: 402  VMLDTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEE 461

Query: 1381 XXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 1202
                         K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+P DIT
Sbjct: 462  KKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDIT 521

Query: 1201 INIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSDK 1022
            INIGKD PIPECPIPGE WKE++HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKGQSD+
Sbjct: 522  INIGKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDR 581

Query: 1021 EKYEKARLLKDYIHGIRAAYTKDFASKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTV 842
            EKYEKAR LKDYIH IRAAYTKDF S+D  ++QIAVATYLIDKLALRAGNEKDDDEADTV
Sbjct: 582  EKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTV 641

Query: 841  GCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFDK 662
            GCCTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE  V+KAI QF+ GK+ +++LFDK
Sbjct: 642  GCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDK 701

Query: 661  LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVAI 482
            LDT+KLNAHLKELMPGLTAKVFRTYNASITLD M++K T   DV  K+ VYQ ANKEVAI
Sbjct: 702  LDTAKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAI 761

Query: 481  ICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPL-KNADGKPKRNLN 305
            ICNHQRTVSKTHSAQMSRL EKIE+LKGVL++L+ DL RAKKGKPPL K++DGK KRNL 
Sbjct: 762  ICNHQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLA 821

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            PEALERK+AQTNAKIEKMERD +TKEDLKTVALGTSKINYLDPRITVAWCKR EVPIEKI
Sbjct: 822  PEALERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 881

Query: 124  FNKSLLAKFAWSMDVDPSFRF 62
            FNKSLLAKFAW+MDVDP FRF
Sbjct: 882  FNKSLLAKFAWAMDVDPEFRF 902



 Score = 31.6 bits (70), Expect(2) = 0.0
 Identities = 41/169 (24%), Positives = 59/169 (34%), Gaps = 9/169 (5%)
 Frame = -2

Query: 2826 MAVDACSTPSLLEDSDED-NLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSR----- 2665
            MAV+A S PS + D D+D + P VFKR            ++K+ SS   +GQ+S      
Sbjct: 1    MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKRPSSSTANGQNSNAPKDK 60

Query: 2664 ---NGSDVRPVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2494
               + S V PV     S +     ++ ++                               
Sbjct: 61   TTVSSSKVLPVKSPPPSQK-----ATTSSAKASPLKSPMRSPVKSPVRSPVKSPVANSKE 115

Query: 2493 XXXXXXTVKQLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDRL 2347
                   +KQL  H  +                S   DS+DDKPLS RL
Sbjct: 116  SSPLDDRLKQLPQHN-ALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARL 163


>ref|XP_010323847.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
            lycopersicum]
          Length = 881

 Score =  944 bits (2441), Expect(2) = 0.0
 Identities = 484/741 (65%), Positives = 542/741 (73%)
 Frame = -1

Query: 2284 REDEDEDSDDQKPLSSRFPSKSNLVESTSKSKNPGEKKPLLAKVQQNGSASRDGPVDKSS 2105
            R  + EDSDD+ PL+SRFP KSN   STSK  +  E KP   K++QNG  S        +
Sbjct: 178  RPPKKEDSDDETPLASRFPMKSNAGASTSKFSSSEEVKP---KIRQNGLPS--------A 226

Query: 2104 SLSIKRPPGEVKSSIESAVKKPKLSGPTAAINKKQATVKVAPKVEDDDDDILISQTXXXX 1925
            ++  KRPPGEV   +   +K                  K   K EDDDDD          
Sbjct: 227  TVLSKRPPGEVSLLLRLQLKSLDFLMRPHLFLVSNXPFKTEKKTEDDDDD---------- 276

Query: 1924 XXXXXXXXXXXXXXDHVPMTQRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1745
                            VP++QR+                                     
Sbjct: 277  ----------------VPISQRIKKAVDSASASASKVSYVKKATKVVSSSMKKTKKKLKK 320

Query: 1744 XXXXXXXXXPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGQPVTLTPEQEEVATMF 1565
                      P SG+GQKWTTL HNGVIFPPPYKPHGVKMLYKG+PV LTPEQEEVATM+
Sbjct: 321  PKYSKSSKLQPSSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMY 380

Query: 1564 AVMLDTDYMNKPQFKKNFFSDWKKILGKNHTIQNLEDCDFTPIYEWHXXXXXXXXXXXXX 1385
            AVMLDT+YM K QFK+NF +DW+KILGKNH IQ LE+CDFTPIYEWH             
Sbjct: 381  AVMLDTEYMTKEQFKENFMNDWRKILGKNHVIQKLEECDFTPIYEWHQSEKEKKKQMSSE 440

Query: 1384 XXXXXXXXXXXXXXKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDI 1205
                          K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DI
Sbjct: 441  EKKALREEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDI 500

Query: 1204 TINIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGQSD 1025
            TINIGK  P+PECPIPG+RWKE+RHDNTVTWLAFWNDPINP+EFKYVFLAASS+LKGQSD
Sbjct: 501  TINIGKGVPVPECPIPGQRWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSD 560

Query: 1024 KEKYEKARLLKDYIHGIRAAYTKDFASKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 845
            KEKYEKAR LKDYI GIR+AYTKDFASKDP+K+QIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 561  KEKYEKARRLKDYIEGIRSAYTKDFASKDPVKRQIAVATYLIDKLALRAGNEKDDDEADT 620

Query: 844  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVESAVFKAIQQFRIGKEGSENLFD 665
            VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEV V   VFKAIQQFR GK+GS++LFD
Sbjct: 621  VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVAVYEPVFKAIQQFRSGKKGSDDLFD 680

Query: 664  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMISKETKGRDVPEKVVVYQHANKEVA 485
            KLDTSKLNAHLKELMPGLTAKVFRTYNAS TL+  ++K T+G ++ +K+ VY  ANKEVA
Sbjct: 681  KLDTSKLNAHLKELMPGLTAKVFRTYNASFTLEQQLTKLTQGGELADKIAVYNVANKEVA 740

Query: 484  IICNHQRTVSKTHSAQMSRLNEKIEELKGVLEELKTDLSRAKKGKPPLKNADGKPKRNLN 305
            IICNHQRTVSK+HS Q+SRLN KI+ELK +LEE K DL+RAKKGKPP+K ADGK KRNL 
Sbjct: 741  IICNHQRTVSKSHSVQISRLNNKIDELKAILEEFKVDLARAKKGKPPVKGADGKAKRNLT 800

Query: 304  PEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRQEVPIEKI 125
            P+AL+ KI QTN KI+ +ER  +TKE+LKTVALGTSKINYLDPRITVAWCKR EVPIEK+
Sbjct: 801  PQALQIKIDQTNVKIDNIERQIDTKEELKTVALGTSKINYLDPRITVAWCKRHEVPIEKM 860

Query: 124  FNKSLLAKFAWSMDVDPSFRF 62
            FNKSLLAKFAW+MDV+PSF F
Sbjct: 861  FNKSLLAKFAWAMDVEPSFTF 881



 Score = 48.9 bits (115), Expect(2) = 0.0
 Identities = 44/161 (27%), Positives = 60/161 (37%), Gaps = 1/161 (0%)
 Frame = -2

Query: 2826 MAVDACSTPSLLED-SDEDNLPLVFKRTXXXXXXXXXXSDIKKLSSQKRDGQSSRNGSDV 2650
            MAV+A +  +L+ED  D+D++PLVFKR+                SSQK+DG+S R   D+
Sbjct: 1    MAVEAFAKTNLMEDMDDDDDMPLVFKRSSTTSKQNQ-----SNSSSQKQDGRSGRQVPDI 55

Query: 2649 RPVNGQSSSAQMGRVVSSANTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTV 2470
            R  NGQSSS    + V+S+                                         
Sbjct: 56   RSPNGQSSSTHKVKTVTSSKASPAVSPLTSPKASPLSSRTSPAPNSRPSSSAGNQ----A 111

Query: 2469 KQLENHKTSRXXXXXXXXXXXXXXXSTPEDSDDDKPLSDRL 2347
            K +                         EDSDDDK LS R+
Sbjct: 112  KNVNQQSNVTPKESKQAVEPKSEPNDEAEDSDDDKLLSSRV 152